Pregenerated sensors for B9D2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063439Ensembl transcript IDs: ENSMUST00000108403.4, ENSMUST00000205325.2, ENSMUST00000205658.2, ENSMUST00000206913.2
Found 70 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GGGCCCTGCTCATGTCCCTCCAACCCACAGCCCTTTCTACCCCGTAGTTCAGTGGGGAGTTCCTGGCCTTaGAGTCCATGGCATAGGGGC | + |
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Preference number: 2 (lower is better) Translates to: GPCSCPSNPQPFLPRSSVGSSWP*SPWHRG Trigger: GCCCCTATGCCATGGACTGCAAGGCCAGGAACTCCC...CACTGAACTACGGGGTAGAAAGGGCTGTGGGTTGGAGGGACATGAGCAGGGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000108403.4 ENSMUST00000205658.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGTGGGCCCTGCTCATGTCCCTCCAACCCACAGCCCTTTCTACCCCGTAGTTGGGGGTGATCAGGACTaGCAGTCTCCAGAGTCCACG | + |
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Preference number: 2 (lower is better) Translates to: TVGPAHVPPTHSPFYPVVGGDQD*QSPEST Trigger: CGTGGACTCTGGAGACTGTCAGTCCTGATCACCCCC...AACTACGGGGTAGAAAGGGCTGTGGGTTGGAGGGACATGAGCAGGGCCCACTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108403.4 ENSMUST00000205658.2 |
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| 3UTR-3UTR TCA 90 bp | CAAACAGTGGGCCCTGCTCATGTCCCTCCAACCCACAGCCCTTTCTACCCCGTAGCCATGACTTGGGGGTaGTCAGGACTGACAGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: QTVGPAHVPPTHSPFYPVAMTWG*SGLTVS Trigger: GGAGACTGTCAGTCCTGATCACCCCCAAGTCATGGC...TACGGGGTAGAAAGGGCTGTGGGTTGGAGGGACATGAGCAGGGCCCACTGTTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108403.4 ENSMUST00000205658.2 |
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| 3UTR-3UTR CCA 90 bp | GGCCCTGCTCATGTCCCTCCAACCCACAGCCCTTTCTACCCCGTAGTTCAGTGGTGGCCTTGCAGTCCATaGCATAGGGGCCATGACTTG | + |
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Preference number: 2 (lower is better) Translates to: GPAHVPPTHSPFYPVVQWWPCSP*HRGHDL Trigger: CAAGTCATGGCCCCTATGCCATGGACTGCAAGGCCA...CCACTGAACTACGGGGTAGAAAGGGCTGTGGGTTGGAGGGACATGAGCAGGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108403.4 ENSMUST00000205658.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCCCTGCTCATGTCCCTCCAACCCACAGCCCTTTCTACCCCGTAGTTCAGTGCCATTATGTGCTCAGTaGATGATGGCGATTAGTAGC | + |
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Preference number: 2 (lower is better) Translates to: GPCSCPSNPQPFLPRSSVPLCAQ*MMAISS Trigger: GCTACTAATCGCCATCATCCACTGAGCACATAATGG...CACTGAACTACGGGGTAGAAAGGGCTGTGGGTTGGAGGGACATGAGCAGGGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108403.4 ENSMUST00000205658.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGTGGGCCCTGCTCATGTCCCTCCAACCCACAGCCCTTTCTACCCCGTAGTTCCATTATGTGCTCAGTaGATGATGGCGATTAGTAGC | + |
|
Preference number: 2 (lower is better) Translates to: TVGPAHVPPTHSPFYPVVPLCAQ*MMAISS Trigger: GCTACTAATCGCCATCATCCACTGAGCACATAATGG...AACTACGGGGTAGAAAGGGCTGTGGGTTGGAGGGACATGAGCAGGGCCCACTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108403.4 ENSMUST00000205658.2 |
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| 3UTR CCA 72 bp | CCTCCAACCCACAGCCCTTTCTACCCCGTAGTTCAGTaGAGCATGGGCCACAGGGGAGTTCCTGGCCTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: PPTHSPFYPVVQ*SMGHRGVPGLA Trigger: TGCAAGGCCAGGAACTCCCCTGTGGCCCATGCTCCACTGAACTACGGGGTAGAAAGGGCTGTGGGTTGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108403.4 ENSMUST00000205658.2 |
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| 3UTR CCA 72 bp | CGTAGTTCAGTGGAGCATGGGCCACAGGGGAGTTCCTaGCCTTGCAGTCCATGGCATAGGGGCCATGACTTG | + |
|
Preference number: 3 (lower is better) Translates to: RSSVEHGPQGSS*PCSPWHRGHDL Trigger: CAAGTCATGGCCCCTATGCCATGGACTGCAAGGCCAGGAACTCCCCTGTGGCCCATGCTCCACTGAACTACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108403.4 ENSMUST00000205658.2 |
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| 3UTR GCA 72 bp | TTATTAAGTGCCCCCGACAGTCCAAACAGTGGGCCCTaGTCATGTCCCTCCAACCCACAGCCCTTTCTACCC | + |
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Preference number: 3 (lower is better) Translates to: LLSAPDSPNSGP*SCPSNPQPFLP Trigger: GGGTAGAAAGGGCTGTGGGTTGGAGGGACATGAGCAGGGCCCACTGTTTGGACTGTCGGGGGCACTTAATAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108403.4 ENSMUST00000205658.2 |
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| 3UTR CCA 72 bp | CACGCTTTTATTAAGTGCCCCCGACAGTCCAAACAGTaGGCCCTGCTCATGTCCCTCCAACCCACAGCCCTT | + |
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Preference number: 3 (lower is better) Translates to: HAFIKCPRQSKQ*ALLMSLQPTAL Trigger: AAGGGCTGTGGGTTGGAGGGACATGAGCAGGGCCCACTGTTTGGACTGTCGGGGGCACTTAATAAAAGCGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108403.4 ENSMUST00000205658.2 |
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| CDS-3UTR CCA 90 bp | CCACAGGGGAGTTCCTGGCCTTGCAGTCCATGGCATAGGGGCCATGACTTGGGGTCCTGGGACCACACCTaGAGATGGAGTCGAGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PQGSSWPCSPWHRGHDLGSWDHT*RWSRGQ Trigger: TTGGCCTCGACTCCATCTCCAGGTGTGGTCCCAGGA...CCCCAAGTCATGGCCCCTATGCCATGGACTGCAAGGCCAGGAACTCCCCTGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000108403.4 ENSMUST00000205658.2 |
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| CDS-3UTR TCA 90 bp | CAGTCCAAACAGTGGGCCCTGCTCATGTCCCTCCAACCCACAGCCCTTTCTACCAACCGGTGGCCCCTATaGTCTGCCCGATCACGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QSKQWALLMSLQPTALSTNRWPL*SARSRA Trigger: TGCACGTGATCGGGCAGATCATAGGGGCCACCGGTT...GGTAGAAAGGGCTGTGGGTTGGAGGGACATGAGCAGGGCCCACTGTTTGGACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108403.4 ENSMUST00000205658.2 |
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| CDS-3UTR GCA 90 bp | CAAACAGTGGGCCCTGCTCATGTCCCTCCAACCCACAGCCCTTTCTACCCCGTAAAAGCCCGTGCTAGCTaGTCCCTCCAACTGCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: QTVGPAHVPPTHSPFYPVKARAS*SLQLPR Trigger: CCTGGGCAGTTGGAGGGAGCAGCTAGCACGGGCTTT...TACGGGGTAGAAAGGGCTGTGGGTTGGAGGGACATGAGCAGGGCCCACTGTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108403.4 ENSMUST00000205658.2 |
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| CDS-3UTR GCA 90 bp | CAGTCCAAACAGTGGGCCCTGCTCATGTCCCTCCAACCCACAGCCCTTTCTACCAAAGCCCGTGCTAGCTaGTCCCTCCAACTGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QSKQWALLMSLQPTALSTKARAS*SLQLPR Trigger: CCTGGGCAGTTGGAGGGAGCAGCTAGCACGGGCTTT...GGTAGAAAGGGCTGTGGGTTGGAGGGACATGAGCAGGGCCCACTGTTTGGACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108403.4 ENSMUST00000205658.2 |
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| CDS-3UTR CCA 90 bp | GGCCCTGCTCATGTCCCTCCAACCCACAGCCCTTTCTACCCCGTAGTTCAGTGGGACCACACCTGGAGATaGAGTCGAGGCCAACCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GPAHVPPTHSPFYPVVQWDHTWR*SRGQPW Trigger: CCAAGGTTGGCCTCGACTCCATCTCCAGGTGTGGTC...CCACTGAACTACGGGGTAGAAAGGGCTGTGGGTTGGAGGGACATGAGCAGGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108403.4 ENSMUST00000205658.2 |
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| CDS-3UTR CCA 90 bp | GGGCCCTGCTCATGTCCCTCCAACCCACAGCCCTTTCTACCCCGTAGTTCAGTGGACCACACCTGGAGATaGAGTCGAGGCCAACCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GPCSCPSNPQPFLPRSSVDHTWR*SRGQPW Trigger: CCAAGGTTGGCCTCGACTCCATCTCCAGGTGTGGTC...CACTGAACTACGGGGTAGAAAGGGCTGTGGGTTGGAGGGACATGAGCAGGGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108403.4 ENSMUST00000205658.2 |
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| CDS-3UTR TCA 90 bp | GACCCCCACTTCCTGATATCTTCTCTACCCCAACCTCCGGCACATTCCACAGGCAACCGGTGGCCCCTATaGTCTGCCCGATCACGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: DPHFLISSLPQPPAHSTGNRWPL*SARSRA Trigger: TGCACGTGATCGGGCAGATCATAGGGGCCACCGGTT...GCCTGTGGAATGTGCCGGAGGTTGGGGTAGAGAAGATATCAGGAAGTGGGGGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000205325.2 |
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| CDS-3UTR CCA 90 bp | GGGCCCTGCTCATGTCCCTCCAACCCACAGCCCTTTCTACCCCGTAGTTCAGTGGCCATGTCCCCTATCTaGGGTGTGTCTACCTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: GPCSCPSNPQPFLPRSSVAMSPI*GVSTCV Trigger: GACACAGGTAGACACACCCCAGATAGGGGACATGGC...CACTGAACTACGGGGTAGAAAGGGCTGTGGGTTGGAGGGACATGAGCAGGGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108403.4 ENSMUST00000205658.2 |
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| CDS-3UTR CCA 90 bp | GAGTCCACGTGCCTGCTTCACTGCTGTGCCATTATGTGCTCAGTGGATGATGGCTGCGTGCAGCAGCTGTaGCCCACCACCCACGAAAGC | + |
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Preference number: 4 (lower is better) Translates to: ESTCLLHCCAIMCSVDDGCVQQL*PTTHES Trigger: GCTTTCGTGGGTGGTGGGCCACAGCTGCTGCACGCA...GCCATCATCCACTGAGCACATAATGGCACAGCAGTGAAGCAGGCACGTGGACTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108403.4 ENSMUST00000205658.2 |
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| CDS-3UTR GCA 90 bp | GGGCCCTGCTCATGTCCCTCCAACCCACAGCCCTTTCTACCCCGTAGTTCAGTGTGTGGATGCCCCACTTaGAAAAGAGGCTGCTTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: GPCSCPSNPQPFLPRSSVCGCPT*KRGCFP Trigger: CGGAAAGCAGCCTCTTTTGCAAGTGGGGCATCCACA...CACTGAACTACGGGGTAGAAAGGGCTGTGGGTTGGAGGGACATGAGCAGGGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000108403.4 ENSMUST00000205658.2 |
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| CDS-3UTR CCA 90 bp | CAGTCCAAACAGTGGGCCCTGCTCATGTCCCTCCAACCCACAGCCCTTTCTACCGCCATGTCCCCTATCTaGGGTGTGTCTACCTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: QSKQWALLMSLQPTALSTAMSPI*GVSTCV Trigger: GACACAGGTAGACACACCCCAGATAGGGGACATGGC...GGTAGAAAGGGCTGTGGGTTGGAGGGACATGAGCAGGGCCCACTGTTTGGACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108403.4 ENSMUST00000205658.2 |
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| CDS-3UTR CCA 90 bp | TTGGGGGTGATCAGGACTGACAGTCTCCAGAGTCCACGTGCCTGCTTCACTGCTTCCTGGGACCACACCTaGAGATGGAGTCGAGGCCAA | + |
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Preference number: 4 (lower is better) Translates to: LGVIRTDSLQSPRACFTASWDHT*RWSRGQ Trigger: TTGGCCTCGACTCCATCTCCAGGTGTGGTCCCAGGA...AGCAGTGAAGCAGGCACGTGGACTCTGGAGACTGTCAGTCCTGATCACCCCCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108403.4 ENSMUST00000205658.2 |
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| CDS-3UTR CCA 90 bp | CTGACAGTCTCCAGAGTCCACGTGCCTGCTTCACTGCTGTGCCATTATGTGCTCCGGCCAAAGCTGTCCTaGGACCACACCTGGAGATGG | + |
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Preference number: 4 (lower is better) Translates to: LTVSRVHVPASLLCHYVLRPKLS*DHTWRW Trigger: CCATCTCCAGGTGTGGTCCCAGGACAGCTTTGGCCG...GAGCACATAATGGCACAGCAGTGAAGCAGGCACGTGGACTCTGGAGACTGTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108403.4 ENSMUST00000205658.2 |
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| CDS-3UTR CCA 90 bp | TCAGGACTGACAGTCTCCAGAGTCCACGTGCCTGCTTCACTGCTGTGCCATTATTGCGTGCAGCAGCTGTaGCCCACCACCCACGAAAGC | + |
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Preference number: 4 (lower is better) Translates to: SGLTVSRVHVPASLLCHYCVQQL*PTTHES Trigger: GCTTTCGTGGGTGGTGGGCCACAGCTGCTGCACGCA...ATAATGGCACAGCAGTGAAGCAGGCACGTGGACTCTGGAGACTGTCAGTCCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108403.4 ENSMUST00000205658.2 |
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| CDS-3UTR TCA 90 bp | TCAGGACTGACAGTCTCCAGAGTCCACGTGCCTGCTTCACTGCTGTGCCATTATAACCGGTGGCCCCTATaGTCTGCCCGATCACGTGCA | + |
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Preference number: 4 (lower is better) Translates to: SGLTVSRVHVPASLLCHYNRWPL*SARSRA Trigger: TGCACGTGATCGGGCAGATCATAGGGGCCACCGGTT...ATAATGGCACAGCAGTGAAGCAGGCACGTGGACTCTGGAGACTGTCAGTCCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108403.4 ENSMUST00000205658.2 |
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| CDS-3UTR TCA 90 bp | CTCCCACTTGACCCCCACTTCCTGATATCTTCTCTACCCCAACCTCCGGCACATCAGCTCCTCTTAGTTTaGCTGCCCCTCCCCATCCTG | + |
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Preference number: 4 (lower is better) Translates to: LPLDPHFLISSLPQPPAHQLLLV*LPLPIL Trigger: CAGGATGGGGAGGGGCAGTCAAACTAAGAGGAGCTG...ATGTGCCGGAGGTTGGGGTAGAGAAGATATCAGGAAGTGGGGGTCAAGTGGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000205325.2 |
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| CDS-3UTR GCA 90 bp | CTTGACCCCCACTTCCTGATATCTTCTCTACCCCAACCTCCGGCACATTCCACACGGCCCCTGTGTGGATaGCCCACTTGCAAAAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: LDPHFLISSLPQPPAHSTRPLCG*PTCKRG Trigger: GCCTCTTTTGCAAGTGGGGCATCCACACAGGGGCCG...TGTGGAATGTGCCGGAGGTTGGGGTAGAGAAGATATCAGGAAGTGGGGGTCAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000205325.2 |
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| CDS-3UTR GCA 90 bp | TCAGGACTGACAGTCTCCAGAGTCCACGTGCCTGCTTCACTGCTGTGCCATTATCGGCCCCTGTGTGGATaGCCCACTTGCAAAAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: SGLTVSRVHVPASLLCHYRPLCG*PTCKRG Trigger: GCCTCTTTTGCAAGTGGGGCATCCACACAGGGGCCG...ATAATGGCACAGCAGTGAAGCAGGCACGTGGACTCTGGAGACTGTCAGTCCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108403.4 ENSMUST00000205658.2 |
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| CDS-3UTR GCA 90 bp | CAAACAGTGGGCCCTGCTCATGTCCCTCCAACCCACAGCCCTTTCTACCCCGTACCTTTAGTAGCGAAGTaGAGGTCAATGGGGTGGGAC | + |
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Preference number: 4 (lower is better) Translates to: QTVGPAHVPPTHSPFYPVPLVAK*RSMGWD Trigger: GTCCCACCCCATTGACCTGCACTTCGCTACTAAAGG...TACGGGGTAGAAAGGGCTGTGGGTTGGAGGGACATGAGCAGGGCCCACTGTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108403.4 ENSMUST00000205658.2 |
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| CDS-3UTR GCA 90 bp | ACAGTGGGCCCTGCTCATGTCCCTCCAACCCACAGCCCTTTCTACCCCGTAGTTCCTTTAGTAGCGAAGTaGAGGTCAATGGGGTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TVGPAHVPPTHSPFYPVVPLVAK*RSMGWD Trigger: GTCCCACCCCATTGACCTGCACTTCGCTACTAAAGG...AACTACGGGGTAGAAAGGGCTGTGGGTTGGAGGGACATGAGCAGGGCCCACTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108403.4 ENSMUST00000205658.2 |
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| CDS-3UTR GCA 90 bp | CTGACAGTCTCCAGAGTCCACGTGCCTGCTTCACTGCTGTGCCATTATGTGCTCGCTGTAGATGGTATCTaGGTGCAGCAGCTGTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: LTVSRVHVPASLLCHYVLAVDGI*VQQLWP Trigger: GGGCCACAGCTGCTGCACGCAGATACCATCTACAGC...GAGCACATAATGGCACAGCAGTGAAGCAGGCACGTGGACTCTGGAGACTGTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108403.4 ENSMUST00000205658.2 |
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| CDS-3UTR CCA 90 bp | CCCCCACTTCCTGATATCTTCTCTACCCCAACCTCCGGCACATTCCACAGGCCTGCCATGTCCCCTATCTaGGGTGTGTCTACCTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: PPLPDIFSTPTSGTFHRPAMSPI*GVSTCV Trigger: GACACAGGTAGACACACCCCAGATAGGGGACATGGC...AGGCCTGTGGAATGTGCCGGAGGTTGGGGTAGAGAAGATATCAGGAAGTGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000205325.2 |
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| CDS-3UTR CCA 90 bp | GACCCCCACTTCCTGATATCTTCTCTACCCCAACCTCCGGCACATTCCACAGGCCGAAGTGCAGGTCAATaGGGTGGGACCAGTAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: DPHFLISSLPQPPAHSTGRSAGQ*GGTSKP Trigger: TGGCTTACTGGTCCCACCCCATTGACCTGCACTTCG...GCCTGTGGAATGTGCCGGAGGTTGGGGTAGAGAAGATATCAGGAAGTGGGGGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205325.2 |
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| CDS-3UTR CCA 90 bp | AGTCCACGTGCCTGCTTCACTGCTGTGCCATTATGTGCTCAGTGGATGATGGCGCAGCTGATGAGTGCCTaGGCTGCTAGGCACATGGCA | + |
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Preference number: 4 (lower is better) Translates to: SPRACFTAVPLCAQWMMAQLMSA*AARHMA Trigger: TGCCATGTGCCTAGCAGCCCAGGCACTCATCAGCTG...CGCCATCATCCACTGAGCACATAATGGCACAGCAGTGAAGCAGGCACGTGGACT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108403.4 ENSMUST00000205658.2 |
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| CDS-3UTR GCA 90 bp | CTGACAGTCTCCAGAGTCCACGTGCCTGCTTCACTGCTGTGCCATTATGTGCTCGTGGCCCCTATGATCTaGCCGATCACGTGCACTTCA | + |
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Preference number: 4 (lower is better) Translates to: LTVSRVHVPASLLCHYVLVAPMI*PITCTS Trigger: TGAAGTGCACGTGATCGGGCAGATCATAGGGGCCAC...GAGCACATAATGGCACAGCAGTGAAGCAGGCACGTGGACTCTGGAGACTGTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108403.4 ENSMUST00000205658.2 |
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| CDS-3UTR GCA 90 bp | CTCCCACTTGACCCCCACTTCCTGATATCTTCTCTACCCCAACCTCCGGCACATGTGGCCCCTATGATCTaGCCGATCACGTGCACTTCA | + |
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Preference number: 4 (lower is better) Translates to: LPLDPHFLISSLPQPPAHVAPMI*PITCTS Trigger: TGAAGTGCACGTGATCGGGCAGATCATAGGGGCCAC...ATGTGCCGGAGGTTGGGGTAGAGAAGATATCAGGAAGTGGGGGTCAAGTGGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000205325.2 |
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| CDS-3UTR GCA 90 bp | CCCCCACTTCCTGATATCTTCTCTACCCCAACCTCCGGCACATTCCACAGGCCTTGTGGATGCCCCACTTaGAAAAGAGGCTGCTTTCCG | + |
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Preference number: 4 (lower is better) Translates to: PPLPDIFSTPTSGTFHRPCGCPT*KRGCFP Trigger: CGGAAAGCAGCCTCTTTTGCAAGTGGGGCATCCACA...AGGCCTGTGGAATGTGCCGGAGGTTGGGGTAGAGAAGATATCAGGAAGTGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000205325.2 |
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| CDS-3UTR CCA 90 bp | GAGTCCACGTGCCTGCTTCACTGCTGTGCCATTATGTGCTCAGTGGATGATGGCCGAAGTGCAGGTCAATaGGGTGGGACCAGTAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: ESTCLLHCCAIMCSVDDGRSAGQ*GGTSKP Trigger: TGGCTTACTGGTCCCACCCCATTGACCTGCACTTCG...GCCATCATCCACTGAGCACATAATGGCACAGCAGTGAAGCAGGCACGTGGACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108403.4 ENSMUST00000205658.2 |
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| CDS-3UTR GCA 90 bp | CTCCCACTTGACCCCCACTTCCTGATATCTTCTCTACCCCAACCTCCGGCACATCCTTTAGTAGCGAAGTaGAGGTCAATGGGGTGGGAC | + |
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Preference number: 4 (lower is better) Translates to: LPLDPHFLISSLPQPPAHPLVAK*RSMGWD Trigger: GTCCCACCCCATTGACCTGCACTTCGCTACTAAAGG...ATGTGCCGGAGGTTGGGGTAGAGAAGATATCAGGAAGTGGGGGTCAAGTGGGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000205325.2 |
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| CDS-3UTR CCA 90 bp | CGTGCCTGCTTCACTGCTGTGCCATTATGTGCTCAGTGGATGATGGCGATTAGTCAGCTGATGAGTGCCTaGGCTGCTAGGCACATGGCA | + |
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Preference number: 4 (lower is better) Translates to: RACFTAVPLCAQWMMAISQLMSA*AARHMA Trigger: TGCCATGTGCCTAGCAGCCCAGGCACTCATCAGCTG...ACTAATCGCCATCATCCACTGAGCACATAATGGCACAGCAGTGAAGCAGGCACG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108403.4 ENSMUST00000205658.2 |
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| CDS-3UTR GCA 90 bp | AGTCCACGTGCCTGCTTCACTGCTGTGCCATTATGTGCTCAGTGGATGATGGCGACTTGCAAAAGAGGCTaGTTTCCGAGAAACCGGTGG | + |
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Preference number: 4 (lower is better) Translates to: SPRACFTAVPLCAQWMMATCKRG*FPRNRW Trigger: CCACCGGTTTCTCGGAAAGCAGCCTCTTTTGCAAGT...CGCCATCATCCACTGAGCACATAATGGCACAGCAGTGAAGCAGGCACGTGGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108403.4 ENSMUST00000205658.2 |
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| CDS-3UTR GCA 90 bp | CCACTTGACCCCCACTTCCTGATATCTTCTCTACCCCAACCTCCGGCACATTCCACTTGCAAAAGAGGCTaGTTTCCGAGAAACCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PLDPHFLISSLPQPPAHSTCKRG*FPRNRW Trigger: CCACCGGTTTCTCGGAAAGCAGCCTCTTTTGCAAGT...GGAATGTGCCGGAGGTTGGGGTAGAGAAGATATCAGGAAGTGGGGGTCAAGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000205325.2 |
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| CDS-3UTR GCA 90 bp | TCAGGACTGACAGTCTCCAGAGTCCACGTGCCTGCTTCACTGCTGTGCCATTATTGTGGATGCCCCACTTaGAAAAGAGGCTGCTTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: SGLTVSRVHVPASLLCHYCGCPT*KRGCFP Trigger: CGGAAAGCAGCCTCTTTTGCAAGTGGGGCATCCACA...ATAATGGCACAGCAGTGAAGCAGGCACGTGGACTCTGGAGACTGTCAGTCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108403.4 ENSMUST00000205658.2 |
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| CDS-3UTR GCA 90 bp | TGCTTCACTGCTGTGCCATTATGTGCTCAGTGGATGATGGCGATTAGTAGCAATCGGCCCCTGTGTGGATaGCCCACTTGCAAAAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: CFTAVPLCAQWMMAISSNRPLCG*PTCKRG Trigger: GCCTCTTTTGCAAGTGGGGCATCCACACAGGGGCCG...ATTGCTACTAATCGCCATCATCCACTGAGCACATAATGGCACAGCAGTGAAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108403.4 ENSMUST00000205658.2 |
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| CDS-3UTR CCA 90 bp | TGCTTCACTGCTGTGCCATTATGTGCTCAGTGGATGATGGCGATTAGTAGCAATCGGCCAAAGCTGTCCTaGGACCACACCTGGAGATGG | + |
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Preference number: 4 (lower is better) Translates to: CFTAVPLCAQWMMAISSNRPKLS*DHTWRW Trigger: CCATCTCCAGGTGTGGTCCCAGGACAGCTTTGGCCG...ATTGCTACTAATCGCCATCATCCACTGAGCACATAATGGCACAGCAGTGAAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108403.4 ENSMUST00000205658.2 |
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| CDS-3UTR GCA 90 bp | TGCTTCACTGCTGTGCCATTATGTGCTCAGTGGATGATGGCGATTAGTAGCAATGTGGCCCCTATGATCTaGCCGATCACGTGCACTTCA | + |
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Preference number: 4 (lower is better) Translates to: CFTAVPLCAQWMMAISSNVAPMI*PITCTS Trigger: TGAAGTGCACGTGATCGGGCAGATCATAGGGGCCAC...ATTGCTACTAATCGCCATCATCCACTGAGCACATAATGGCACAGCAGTGAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108403.4 ENSMUST00000205658.2 |
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| CDS GCA 90 bp | AGCGATCGAAGTGGCGCAGCAGCAGGCCGATACCAAGGTGCACTGTaGCACCCGCGGCCGTGTGCAGGCGGTAGCGGTCAGCCCCGCTGT | + |
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Preference number: 5 (lower is better) Translates to: SDRSGAAAGRYQGAL*HPRPCAGGSGQPRC Trigger: ACAGCGGGGCTGACCGCTACCGCCTGCACACGGCCGCGGGTGGCACAGTGCACCTTGGTATCGGCCTGCTGCTGCGCCACTTCGATCGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108403.4 ENSMUST00000205658.2 |
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| CDS CCA 90 bp | CACCCGCGGCCGTGTGCAGGCGGTAGCGGTCAGCCCCGCTGTAGATaGTATCTGCGTGCAGCAGCTGTGGCCCACCACCCACGAAAGCCC | + |
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Preference number: 5 (lower is better) Translates to: HPRPCAGGSGQPRCR*YLRAAAVAHHPRKP Trigger: GGGCTTTCGTGGGTGGTGGGCCACAGCTGCTGCACGCAGATACCATCTACAGCGGGGCTGACCGCTACCGCCTGCACACGGCCGCGGGTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108403.4 ENSMUST00000205658.2 |
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| CDS GCA 90 bp | GCGTGCAGCAGCTGTGGCCCACCACCCACGAAAGCCCGTGCTAGCTaGTCCCTCCAACTGCCCAGGGGCCTCCATGTAGGGCAGTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: ACSSCGPPPTKARAS*SLQLPRGLHVGQSS Trigger: GCTGGACTGCCCTACATGGAGGCCCCTGGGCAGTTGGAGGGAGCAGCTAGCACGGGCTTTCGTGGGTGGTGGGCCACAGCTGCTGCACGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108403.4 ENSMUST00000205658.2 |
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| CDS CCA 90 bp | ACTGCCCAGGGGCCTCCATGTAGGGCAGTCCAGCTGATGAGTGCCTaGGCTGCTAGGCACATGGCAAAAGCCATAGCCAGCAAGCTGGCA | + |
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Preference number: 5 (lower is better) Translates to: TAQGPPCRAVQLMSA*AARHMAKAIASKLA Trigger: TGCCAGCTTGCTGGCTATGGCTTTTGCCATGTGCCTAGCAGCCCAGGCACTCATCAGCTGGACTGCCCTACATGGAGGCCCCTGGGCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108403.4 ENSMUST00000205658.2 |
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| CDS GCA 90 bp | GGGGTGTGTCTACCTGTGTCTGGCCTTCTCGTACACCTGTGTGGATaGCCCACTTGCAAAAGAGGCTGCTTTCCGAGAAACCGGTGGCCC | + |
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Preference number: 5 (lower is better) Translates to: GVCLPVSGLLVHLCG*PTCKRGCFPRNRWP Trigger: GGGCCACCGGTTTCTCGGAAAGCAGCCTCTTTTGCAAGTGGGGCATCCACACAGGTGTACGAGAAGGCCAGACACAGGTAGACACACCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206913.2 |
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| CDS TCA 90 bp | AGGGAGCAGACAGCCATGGTGTTCCAAGCCCAGCTCCTCTTAGTTTaGCTGCCCCTCCCCATCCTGTCATCCTGTACCCACCTTGGAGAC | + |
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Preference number: 5 (lower is better) Translates to: REQTAMVFQAQLLLV*LPLPILSSCTHLGD Trigger: GTCTCCAAGGTGGGTACAGGATGACAGGATGGGGAGGGGCAGTCAAACTAAGAGGAGCTGGGCTTGGAACACCATGGCTGTCTGCTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205325.2 |
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| CDS-3UTR CAA 90 bp | CAAACAGTGGGCCCTGCTCATGTCCCTCCAACCCACAGCCCTTTCTACCCCGTAGTGTGGATGCCCCACTaGCAAAAGAGGCTGCTTTCC | + |
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Preference number: 5 (lower is better) Translates to: QTVGPAHVPPTHSPFYPVVWMPH*QKRLLS Trigger: GGAAAGCAGCCTCTTTTGCAAGTGGGGCATCCACAC...TACGGGGTAGAAAGGGCTGTGGGTTGGAGGGACATGAGCAGGGCCCACTGTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000108403.4 ENSMUST00000205658.2 |
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| CDS-3UTR CAA 90 bp | GACCCCCACTTCCTGATATCTTCTCTACCCCAACCTCCGGCACATTCCACAGGCGTGTGGATGCCCCACTaGCAAAAGAGGCTGCTTTCC | + |
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Preference number: 5 (lower is better) Translates to: DPHFLISSLPQPPAHSTGVWMPH*QKRLLS Trigger: GGAAAGCAGCCTCTTTTGCAAGTGGGGCATCCACAC...GCCTGTGGAATGTGCCGGAGGTTGGGGTAGAGAAGATATCAGGAAGTGGGGGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000205325.2 |
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| CDS-3UTR CAA 90 bp | TCTCCAGAGTCCACGTGCCTGCTTCACTGCTGTGCCATTATGTGCTCAGTGGATGTGTGGATGCCCCACTaGCAAAAGAGGCTGCTTTCC | + |
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Preference number: 5 (lower is better) Translates to: SPESTCLLHCCAIMCSVDVWMPH*QKRLLS Trigger: GGAAAGCAGCCTCTTTTGCAAGTGGGGCATCCACAC...ATCCACTGAGCACATAATGGCACAGCAGTGAAGCAGGCACGTGGACTCTGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108403.4 ENSMUST00000205658.2 |
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| CDS-3UTR CAA 90 bp | CCACTTGACCCCCACTTCCTGATATCTTCTCTACCCCAACCTCCGGCACATTCCCATCCTGTACCCACCTaGGAGACCTTTAGTAGCGAA | + |
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Preference number: 5 (lower is better) Translates to: PLDPHFLISSLPQPPAHSHPVPT*ETFSSE Trigger: TTCGCTACTAAAGGTCTCCAAGGTGGGTACAGGATG...GGAATGTGCCGGAGGTTGGGGTAGAGAAGATATCAGGAAGTGGGGGTCAAGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205325.2 |
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| CDS GCA 72 bp | AGTGGCGCAGCAGCAGGCCGATACCAAGGTGCACTGTaGCACCCGCGGCCGTGTGCAGGCGGTAGCGGTCAG | + |
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Preference number: 6 (lower is better) Translates to: SGAAAGRYQGAL*HPRPCAGGSGQ Trigger: CTGACCGCTACCGCCTGCACACGGCCGCGGGTGGCACAGTGCACCTTGGTATCGGCCTGCTGCTGCGCCACT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108403.4 ENSMUST00000205658.2 |
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| CDS GCA 72 bp | AGCTGTGGCCCACCACCCACGAAAGCCCGTGCTAGCTaGTCCCTCCAACTGCCCAGGGGCCTCCATGTAGGG | + |
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Preference number: 6 (lower is better) Translates to: SCGPPPTKARAS*SLQLPRGLHVG Trigger: CCCTACATGGAGGCCCCTGGGCAGTTGGAGGGAGCAGCTAGCACGGGCTTTCGTGGGTGGTGGGCCACAGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108403.4 ENSMUST00000205658.2 |
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| CDS CCA 72 bp | CCGTGTGCAGGCGGTAGCGGTCAGCCCCGCTGTAGATaGTATCTGCGTGCAGCAGCTGTGGCCCACCACCCA | + |
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Preference number: 6 (lower is better) Translates to: PCAGGSGQPRCR*YLRAAAVAHHP Trigger: TGGGTGGTGGGCCACAGCTGCTGCACGCAGATACCATCTACAGCGGGGCTGACCGCTACCGCCTGCACACGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108403.4 ENSMUST00000205658.2 |
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| CDS GCA 72 bp | CAGGCGGTAGCGGTCAGCCCCGCTGTAGATGGTATCTaGGTGCAGCAGCTGTGGCCCACCACCCACGAAAGC | + |
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Preference number: 6 (lower is better) Translates to: QAVAVSPAVDGI*VQQLWPTTHES Trigger: GCTTTCGTGGGTGGTGGGCCACAGCTGCTGCACGCAGATACCATCTACAGCGGGGCTGACCGCTACCGCCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108403.4 ENSMUST00000205658.2 |
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| CDS TCA 72 bp | GGGTGTGTCTACCTGTGTCTGGCCTTCTCGTACACCTaGGAGGAGCTTCCATGCGGCCCCTGTGTGGATGCC | + |
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Preference number: 6 (lower is better) Translates to: GCVYLCLAFSYT*EELPCGPCVDA Trigger: GGCATCCACACAGGGGCCGCATGGAAGCTCCTCTCAGGTGTACGAGAAGGCCAGACACAGGTAGACACACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108403.4 ENSMUST00000205325.2 ENSMUST00000205658.2 |
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| CDS CCA 72 bp | GGGCCTCCATGTAGGGCAGTCCAGCTGATGAGTGCCTaGGCTGCTAGGCACATGGCAAAAGCCATAGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: GPPCRAVQLMSA*AARHMAKAIAS Trigger: GCTGGCTATGGCTTTTGCCATGTGCCTAGCAGCCCAGGCACTCATCAGCTGGACTGCCCTACATGGAGGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108403.4 ENSMUST00000205658.2 |
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| CDS CAA 90 bp | CAGGGAGCAGACAGCCATGGTGTTCCAAGCCCAGCTCCTCTTAGTTaGACTGCCCCTCCCCATCCTGTCATCCTGTACCCACCTTGGAGA | + |
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Preference number: 6 (lower is better) Translates to: QGADSHGVPSPAPLS*TAPPHPVILYPPWR Trigger: TCTCCAAGGTGGGTACAGGATGACAGGATGGGGAGGGGCAGTCAAACTAAGAGGAGCTGGGCTTGGAACACCATGGCTGTCTGCTCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205325.2 |
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| CDS GCA 72 bp | TCTGGCCTTCTCGTACACCTGTGTGGATGCCCCACTTaGAAAAGAGGCTGCTTTCCGAGAAACCGGTGGCCC | + |
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Preference number: 6 (lower is better) Translates to: SGLLVHLCGCPT*KRGCFPRNRWP Trigger: GGGCCACCGGTTTCTCGGAAAGCAGCCTCTTTTGCAAGTGGGGCATCCACACAGGTGTACGAGAAGGCCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206913.2 |
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| CDS CCA 72 bp | GCCATGTCCCCTATCTGGGGTGTGTCTACCTGTGTCTaGCCTTCTCGTACACCTGAGAGGAGCTTCCATGCG | + |
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Preference number: 6 (lower is better) Translates to: AMSPIWGVSTCV*PSRTPERSFHA Trigger: CGCATGGAAGCTCCTCTCAGGTGTACGAGAAGGCCAGACACAGGTAGACACACCCCAGATAGGGGACATGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000108403.4 ENSMUST00000205325.2 ENSMUST00000205658.2 |
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| CDS CAA 72 bp | GTCTGGCCTTCTCGTACACCTGTGTGGATGCCCCACTaGCAAAAGAGGCTGCTTTCCGAGAAACCGGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: VWPSRTPVWMPH*QKRLLSEKPVA Trigger: GGCCACCGGTTTCTCGGAAAGCAGCCTCTTTTGCAAGTGGGGCATCCACACAGGTGTACGAGAAGGCCAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206913.2 |
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| CDS CAA 72 bp | GACTGCCCCTCCCCATCCTGTCATCCTGTACCCACCTaGGAGACCTTTAGTAGCGAAGTGCAGGTCAATGGG | + |
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Preference number: 6 (lower is better) Translates to: DCPSPSCHPVPT*ETFSSEVQVNG Trigger: CCCATTGACCTGCACTTCGCTACTAAAGGTCTCCAAGGTGGGTACAGGATGACAGGATGGGGAGGGGCAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205325.2 |
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| CDS CAA 72 bp | GACAGCCATGGTGTTCCAAGCCCAGCTCCTCTTAGTTaGACTGCCCCTCCCCATCCTGTCATCCTGTACCCA | + |
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Preference number: 6 (lower is better) Translates to: DSHGVPSPAPLS*TAPPHPVILYP Trigger: TGGGTACAGGATGACAGGATGGGGAGGGGCAGTCAAACTAAGAGGAGCTGGGCTTGGAACACCATGGCTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205325.2 |
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| CDS CCA 72 bp | GTGTCTACCTGTGTCTGGCCTTCTCGTACACCTGTGTaGATGCCCCACTTGCAAAAGAGGCTGCTTTCCGAG | + |
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Preference number: 6 (lower is better) Translates to: VSTCVWPSRTPV*MPHLQKRLLSE Trigger: CTCGGAAAGCAGCCTCTTTTGCAAGTGGGGCATCCACACAGGTGTACGAGAAGGCCAGACACAGGTAGACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206913.2 |
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| CDS GCA 72 bp | CTACCTGTGTCTGGCCTTCTCGTACACCTGTGTGGATaGCCCACTTGCAAAAGAGGCTGCTTTCCGAGAAAC | + |
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Preference number: 6 (lower is better) Translates to: LPVSGLLVHLCG*PTCKRGCFPRN Trigger: GTTTCTCGGAAAGCAGCCTCTTTTGCAAGTGGGGCATCCACACAGGTGTACGAGAAGGCCAGACACAGGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206913.2 |
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