Pregenerated sensors for B9D1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001039Ensembl transcript IDs: ENSMUST00000102657.10, ENSMUST00000127889.2
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | CCTTTAGCTCCCCTGTTTCCCAGCCTGGTTGGCATGTCCTTGGCTGTGTGTGGGCCTGGGCCACCACCTTaGGGTCTGTGTACTCGGGTC | + |
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Preference number: 4 (lower is better) Translates to: PLAPLFPSLVGMSLAVCGPGPPP*GLCTRV Trigger: GACCCGAGTACACAGACCCCAAGGTGGTGGCCCAGG...CCCACACACAGCCAAGGACATGCCAACCAGGCTGGGAAACAGGGGAGCTAAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102657.10 ENSMUST00000127889.2 |
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| CDS-3UTR CCA 90 bp | ACTACCTTTAGCTCCCCTGTTTCCCAGCCTGGTTGGCATGTCCTTGGCTGTGTGTCCCGGCCTTCACCCTaGGCCACCACCTTGGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: TTFSSPVSQPGWHVLGCVSRPSP*ATTLGS Trigger: AGACCCCAAGGTGGTGGCCCAGGGTGAAGGCCGGGA...CACACAGCCAAGGACATGCCAACCAGGCTGGGAAACAGGGGAGCTAAAGGTAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102657.10 ENSMUST00000127889.2 |
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| CDS-3UTR CCA 90 bp | TCCCCTGTTTCCCAGCCTGGTTGGCATGTCCTTGGCTGTGTGTGGGCTGTAGGGACTCTGGCACAAACATaGGGATGGTCCTTTTGTGCC | + |
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Preference number: 4 (lower is better) Translates to: SPVSQPGWHVLGCVWAVGTLAQT*GWSFCA Trigger: GGCACAAAAGGACCATCCCCATGTTTGTGCCAGAGT...CCCTACAGCCCACACACAGCCAAGGACATGCCAACCAGGCTGGGAAACAGGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102657.10 ENSMUST00000127889.2 |
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| CDS-3UTR CCA 90 bp | CCCTGTTTCCCAGCCTGGTTGGCATGTCCTTGGCTGTGTGTGGGCTGTAGGGCAACTCTGGCACAAACATaGGGATGGTCCTTTTGTGCC | + |
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Preference number: 4 (lower is better) Translates to: PCFPAWLACPWLCVGCRATLAQT*GWSFCA Trigger: GGCACAAAAGGACCATCCCCATGTTTGTGCCAGAGT...TGCCCTACAGCCCACACACAGCCAAGGACATGCCAACCAGGCTGGGAAACAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102657.10 ENSMUST00000127889.2 |
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| CDS-3UTR CCA 90 bp | TATAAAACTACCTTTAGCTCCCCTGTTTCCCAGCCTGGTTGGCATGTCCTTGGCTCCCGGCCTTCACCCTaGGCCACCACCTTGGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: YKTTFSSPVSQPGWHVLGSRPSP*ATTLGS Trigger: AGACCCCAAGGTGGTGGCCCAGGGTGAAGGCCGGGA...GCCAAGGACATGCCAACCAGGCTGGGAAACAGGGGAGCTAAAGGTAGTTTTATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102657.10 ENSMUST00000127889.2 |
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| CDS-3UTR GCA 90 bp | CTCCCCTGTTTCCCAGCCTGGTTGGCATGTCCTTGGCTGTGTGTGGGCTGTAGGTTCCACACCAGTGCTTaGCGTACATCTTGGCTCTTA | + |
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Preference number: 4 (lower is better) Translates to: LPCFPAWLACPWLCVGCRFHTSA*RTSWLL Trigger: TAAGAGCCAAGATGTACGGCAAGCACTGGTGTGGAA...CCTACAGCCCACACACAGCCAAGGACATGCCAACCAGGCTGGGAAACAGGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102657.10 |
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| CDS-3UTR GCA 90 bp | CCTTTAGCTCCCCTGTTTCCCAGCCTGGTTGGCATGTCCTTGGCTGTGTGTGGGGAAGTTCCACACCAGTaGTTGCCGTACATCTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PLAPLFPSLVGMSLAVCGEVPHQ*LPYILA Trigger: AGCCAAGATGTACGGCAAGCACTGGTGTGGAACTTC...CCCACACACAGCCAAGGACATGCCAACCAGGCTGGGAAACAGGGGAGCTAAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102657.10 |
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| CDS-3UTR GCA 90 bp | CCTTTAGCTCCCCTGTTTCCCAGCCTGGTTGGCATGTCCTTGGCTGTGTGTGGGTTTCATAGAGAGATGTaGGTCCTGGAGAGAGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PLAPLFPSLVGMSLAVCGFHREM*VLERGA Trigger: TGCCCCTCTCTCCAGGACGCACATCTCTCTATGAAA...CCCACACACAGCCAAGGACATGCCAACCAGGCTGGGAAACAGGGGAGCTAAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127889.2 |
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| CDS-3UTR CCA 90 bp | ATAAAACTACCTTTAGCTCCCCTGTTTCCCAGCCTGGTTGGCATGTCCTTGGCTCCTGGGCCACCACCTTaGGGTCTGTGTACTCGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: IKLPLAPLFPSLVGMSLAPGPPP*GLCTRV Trigger: GACCCGAGTACACAGACCCCAAGGTGGTGGCCCAGG...AGCCAAGGACATGCCAACCAGGCTGGGAAACAGGGGAGCTAAAGGTAGTTTTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102657.10 ENSMUST00000127889.2 |
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| CDS-3UTR GCA 90 bp | CTCCCCTGTTTCCCAGCCTGGTTGGCATGTCCTTGGCTGTGTGTGGGCTGTAGGACACAAAGCAGTACTTaGAGTAGAGGTCATCATACT | + |
|
Preference number: 4 (lower is better) Translates to: LPCFPAWLACPWLCVGCRTQSST*SRGHHT Trigger: AGTATGATGACCTCTACTGCAAGTACTGCTTTGTGT...CCTACAGCCCACACACAGCCAAGGACATGCCAACCAGGCTGGGAAACAGGGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102657.10 |
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| CDS-3UTR CCA 90 bp | CTACCTTTAGCTCCCCTGTTTCCCAGCCTGGTTGGCATGTCCTTGGCTGTGTGTTGTAGATGTAGACTCTaGCACAAACATGGGGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: LPLAPLFPSLVGMSLAVCCRCRL*HKHGDG Trigger: ACCATCCCCATGTTTGTGCCAGAGTCTACATCTACA...ACACACAGCCAAGGACATGCCAACCAGGCTGGGAAACAGGGGAGCTAAAGGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102657.10 ENSMUST00000127889.2 |
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| CDS-3UTR TCA 90 bp | CATGTGACACTTTATTATATAAAACTACCTTTAGCTCCCCTGTTTCCCAGCCTGCCGGCCCATAGACACTaGGTACAATCTGTGGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: HVTLYYIKLPLAPLFPSLPAHRH*VQSVAS Trigger: GCTGGCCACAGATTGTACTCAGTGTCTATGGGCCGG...CAGGCTGGGAAACAGGGGAGCTAAAGGTAGTTTTATATAATAAAGTGTCACATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102657.10 |
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| CDS-3UTR TCA 90 bp | ACTTTATTATATAAAACTACCTTTAGCTCCCCTGTTTCCCAGCCTGGTTGGCATCTTAGATGCTATCTGTaGGATCCCCTCCTCCAGACC | + |
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Preference number: 4 (lower is better) Translates to: TLLYKTTFSSPVSQPGWHLRCYL*DPLLQT Trigger: GGTCTGGAGGAGGGGATCTCACAGATAGCATCTAAG...ATGCCAACCAGGCTGGGAAACAGGGGAGCTAAAGGTAGTTTTATATAATAAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102657.10 |
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| CDS-3UTR CCA 90 bp | CATGTGACACTTTATTATATAAAACTACCTTTAGCTCCCCTGTTTCCCAGCCTGGCACAAACATGGGGATaGTCCTTTTGTGCCGTCCTG | + |
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Preference number: 4 (lower is better) Translates to: HVTLYYIKLPLAPLFPSLAQTWG*SFCAVL Trigger: CAGGACGGCACAAAAGGACCATCCCCATGTTTGTGC...CAGGCTGGGAAACAGGGGAGCTAAAGGTAGTTTTATATAATAAAGTGTCACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000102657.10 |
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| CDS-3UTR CCA 90 bp | AAACATGTGACACTTTATTATATAAAACTACCTTTAGCTCCCCTGTTTCCCAGCGTTGGGGCCCAGTCCTaGCCATACACAAAGCAGTAC | + |
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Preference number: 4 (lower is better) Translates to: KHVTLYYIKLPLAPLFPSVGAQS*PYTKQY Trigger: GTACTGCTTTGTGTATGGCCAGGACTGGGCCCCAAC...GCTGGGAAACAGGGGAGCTAAAGGTAGTTTTATATAATAAAGTGTCACATGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102657.10 |
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| CDS-3UTR GCA 90 bp | AAACATGTGACACTTTATTATATAAAACTACCTTTAGCTCCCCTGTTTCCCAGCATACTCTGGAAACTGTaGGCTCTCTACCTGCCCGGT | + |
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Preference number: 4 (lower is better) Translates to: KHVTLYYIKLPLAPLFPSILWKL*ALYLPG Trigger: ACCGGGCAGGTAGAGAGCGCACAGTTTCCAGAGTAT...GCTGGGAAACAGGGGAGCTAAAGGTAGTTTTATATAATAAAGTGTCACATGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102657.10 |
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| CDS-3UTR CCA 90 bp | ACATGTGACACTTTATTATATAAAACTACCTTTAGCTCCCCTGTTTCCCAGCCTGAGGTCATCATACTCTaGAAACTGTGCGCTCTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: TCDTLLYKTTFSSPVSQPEVIIL*KLCALY Trigger: GTAGAGAGCGCACAGTTTCCAGAGTATGATGACCTC...AGGCTGGGAAACAGGGGAGCTAAAGGTAGTTTTATATAATAAAGTGTCACATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102657.10 |
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| CDS-3UTR CCA 90 bp | ACTTTATTATATAAAACTACCTTTAGCTCCCCTGTTTCCCAGCCTGGTTGGCATTGTAGATGTAGACTCTaGCACAAACATGGGGATGGT | + |
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Preference number: 4 (lower is better) Translates to: TLLYKTTFSSPVSQPGWHCRCRL*HKHGDG Trigger: ACCATCCCCATGTTTGTGCCAGAGTCTACATCTACA...ATGCCAACCAGGCTGGGAAACAGGGGAGCTAAAGGTAGTTTTATATAATAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102657.10 ENSMUST00000127889.2 |
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| CDS-3UTR CAA 90 bp | CCCTGTTTCCCAGCCTGGTTGGCATGTCCTTGGCTGTGTGTGGGCTGTAGGGCACCCTGGGCCACCACCTaGGGGTCTGTGTACTCGGGT | + |
|
Preference number: 5 (lower is better) Translates to: PCFPAWLACPWLCVGCRAPWATT*GSVYSG Trigger: ACCCGAGTACACAGACCCCAAGGTGGTGGCCCAGGG...TGCCCTACAGCCCACACACAGCCAAGGACATGCCAACCAGGCTGGGAAACAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102657.10 ENSMUST00000127889.2 |
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| CDS-3UTR CAA 90 bp | CCTTGGCTGTGTGTGGGCTGTAGGGCATCTGGTCCACAGTGGCGGACAGAAGGGAGGACCCAGGACTCCTaGTGTGTCCACAGGCCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: PWLCVGCRASGPQWRTEGRTQDS*CVHRPS Trigger: ACTGGGCCTGTGGACACACAAGGAGTCCTGGGTCCT...CCCTTCTGTCCGCCACTGTGGACCAGATGCCCTACAGCCCACACACAGCCAAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102657.10 ENSMUST00000127889.2 |
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| CDS-3UTR CAA 90 bp | TCCCCTGTTTCCCAGCCTGGTTGGCATGTCCTTGGCTGTGTGTGGGCTGTAGGGATGGGGATGGTCCTTTaGTGCCGTCCTGGAGAGAGG | + |
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Preference number: 5 (lower is better) Translates to: SPVSQPGWHVLGCVWAVGMGMVL*CRPGER Trigger: CCTCTCTCCAGGACGGCACAAAAGGACCATCCCCAT...CCCTACAGCCCACACACAGCCAAGGACATGCCAACCAGGCTGGGAAACAGGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102657.10 |
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| CDS-3UTR CAA 90 bp | CTACCTTTAGCTCCCCTGTTTCCCAGCCTGGTTGGCATGTCCTTGGCTGTGTGTCCCTGGGCCACCACCTaGGGGTCTGTGTACTCGGGT | + |
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Preference number: 5 (lower is better) Translates to: LPLAPLFPSLVGMSLAVCPWATT*GSVYSG Trigger: ACCCGAGTACACAGACCCCAAGGTGGTGGCCCAGGG...ACACACAGCCAAGGACATGCCAACCAGGCTGGGAAACAGGGGAGCTAAAGGTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102657.10 ENSMUST00000127889.2 |
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| CDS-3UTR CAA 90 bp | CTCCCCTGTTTCCCAGCCTGGTTGGCATGTCCTTGGCTGTGTGTGGGCTGTAGGGTTCCACACCAGTGCTaGCCGTACATCTTGGCTCTT | + |
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Preference number: 5 (lower is better) Translates to: LPCFPAWLACPWLCVGCRVPHQC*PYILAL Trigger: AAGAGCCAAGATGTACGGCAAGCACTGGTGTGGAAC...CCTACAGCCCACACACAGCCAAGGACATGCCAACCAGGCTGGGAAACAGGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102657.10 |
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| CDS-3UTR CAA 90 bp | TGGCTGTGTGTGGGCTGTAGGGCATCTGGTCCACAGTGGCGGACAGAAGGGCTGTCCTTGGTCACCACATaGAAGAGGAGGGTAACAAAT | + |
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Preference number: 5 (lower is better) Translates to: WLCVGCRASGPQWRTEGLSLVTT*KRRVTN Trigger: ATTTGTTACCCTCCTCTTCAATGTGGTGACCAAGGA...CAGCCCTTCTGTCCGCCACTGTGGACCAGATGCCCTACAGCCCACACACAGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102657.10 ENSMUST00000127889.2 |
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| CDS-3UTR CAA 90 bp | TCCCAGCCTGGTTGGCATGTCCTTGGCTGTGTGTGGGCTGTAGGGCATCTGGTCAGCTTCTTCATGTCCTaGGTCACCACATTGAAGAGG | + |
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Preference number: 5 (lower is better) Translates to: SQPGWHVLGCVWAVGHLVSFFMS*VTTLKR Trigger: CCTCTTCAATGTGGTGACCAAGGACATGAAGAAGCT...GACCAGATGCCCTACAGCCCACACACAGCCAAGGACATGCCAACCAGGCTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102657.10 ENSMUST00000127889.2 |
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| CDS-3UTR CAA 90 bp | CCCTGTTTCCCAGCCTGGTTGGCATGTCCTTGGCTGTGTGTGGGCTGTAGGGCAAGCTTCTTCATGTCCTaGGTCACCACATTGAAGAGG | + |
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Preference number: 5 (lower is better) Translates to: PCFPAWLACPWLCVGCRASFFMS*VTTLKR Trigger: CCTCTTCAATGTGGTGACCAAGGACATGAAGAAGCT...TGCCCTACAGCCCACACACAGCCAAGGACATGCCAACCAGGCTGGGAAACAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102657.10 ENSMUST00000127889.2 |
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| CDS GCA 90 bp | GACCCGCTGTTGGGGCCCAGTCCTGGCCATACACAAAGCAGTACTTaGAGTAGAGGTCATCATACTCTGGAAACTGTGCGCTCTCTACCT | + |
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Preference number: 5 (lower is better) Translates to: DPLLGPSPGHTQSST*SRGHHTLETVRSLP Trigger: AGGTAGAGAGCGCACAGTTTCCAGAGTATGATGACCTCTACTGCAAGTACTGCTTTGTGTATGGCCAGGACTGGGCCCCAACAGCGGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102657.10 |
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| CDS CCA 90 bp | GTCACATCGATGGGGAAGTTCCACACCAGTGCTTGCCGTACATCTTaGCTCTTAGATGCTATCTGTGAGATCCCCTCCTCCAGACCCGCT | + |
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Preference number: 5 (lower is better) Translates to: VTSMGKFHTSACRTS*LLDAICEIPSSRPA Trigger: AGCGGGTCTGGAGGAGGGGATCTCACAGATAGCATCTAAGAGCCAAGATGTACGGCAAGCACTGGTGTGGAACTTCCCCATCGATGTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102657.10 |
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| CDS-3UTR CAA 90 bp | TCCCCTGTTTCCCAGCCTGGTTGGCATGTCCTTGGCTGTGTGTGGGCTGTAGGGTCCTTGGTCACCACATaGAAGAGGAGGGTAACAAAT | + |
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Preference number: 5 (lower is better) Translates to: SPVSQPGWHVLGCVWAVGSLVTT*KRRVTN Trigger: ATTTGTTACCCTCCTCTTCAATGTGGTGACCAAGGA...CCCTACAGCCCACACACAGCCAAGGACATGCCAACCAGGCTGGGAAACAGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102657.10 ENSMUST00000127889.2 |
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| CDS-3UTR CAA 90 bp | CTTTATTATATAAAACTACCTTTAGCTCCCCTGTTTCCCAGCCTGGTTGGCATGCCTCCAGACCCGCTGTaGGGGCCCAGTCCTGGCCAT | + |
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Preference number: 5 (lower is better) Translates to: LYYIKLPLAPLFPSLVGMPPDPL*GPSPGH Trigger: ATGGCCAGGACTGGGCCCCAACAGCGGGTCTGGAGG...CATGCCAACCAGGCTGGGAAACAGGGGAGCTAAAGGTAGTTTTATATAATAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102657.10 |
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| CDS CCA 90 bp | CTGGCCATACACAAAGCAGTACTTGCAGTAGAGGTCATCATACTCTaGAAACTGTGCGCTCTCTACCTGCCCGGTGATCATGAGCAGGAA | + |
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Preference number: 5 (lower is better) Translates to: LAIHKAVLAVEVIIL*KLCALYLPGDHEQE Trigger: TTCCTGCTCATGATCACCGGGCAGGTAGAGAGCGCACAGTTTCCAGAGTATGATGACCTCTACTGCAAGTACTGCTTTGTGTATGGCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102657.10 |
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| CDS-3UTR CAA 90 bp | TATTATATAAAACTACCTTTAGCTCCCCTGTTTCCCAGCCTGGTTGGCATGTCCAGGACCCAGGACTCCTaGTGTGTCCACAGGCCCAGT | + |
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Preference number: 5 (lower is better) Translates to: YYIKLPLAPLFPSLVGMSRTQDS*CVHRPS Trigger: ACTGGGCCTGTGGACACACAAGGAGTCCTGGGTCCT...GGACATGCCAACCAGGCTGGGAAACAGGGGAGCTAAAGGTAGTTTTATATAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102657.10 ENSMUST00000127889.2 |
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| CDS CCA 90 bp | ATCATTCCCAAACACATCCGGCCCATAGACACTGAGTACAATCTGTaGCCAGCCATAGGGGTTGGTACTTTTAAAGGTCACATCGATGGG | + |
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Preference number: 5 (lower is better) Translates to: IIPKHIRPIDTEYNL*PAIGVGTFKGHIDG Trigger: CCCATCGATGTGACCTTTAAAAGTACCAACCCCTATGGCTGGCCACAGATTGTACTCAGTGTCTATGGGCCGGATGTGTTTGGGAATGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102657.10 |
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| CDS-3UTR CAA 90 bp | TATTATATAAAACTACCTTTAGCTCCCCTGTTTCCCAGCCTGGTTGGCATGTCCATGGGGATGGTCCTTTaGTGCCTGAAACAAATGTTT | + |
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Preference number: 5 (lower is better) Translates to: YYIKLPLAPLFPSLVGMSMGMVL*CLKQMF Trigger: AAACATTTGTTTCAGGCACAAAAGGACCATCCCCAT...GGACATGCCAACCAGGCTGGGAAACAGGGGAGCTAAAGGTAGTTTTATATAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000127889.2 |
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| CDS CAA 72 bp | CGAGTCACTTCCCGGCCTTCACCCTGGGCCACCACCTaGGGGTCTGTGTACTCGGGTCGCCGTCCCATGAAC | + |
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Preference number: 6 (lower is better) Translates to: RVTSRPSPWATT*GSVYSGRRPMN Trigger: GTTCATGGGACGGCGACCCGAGTACACAGACCCCAAGGTGGTGGCCCAGGGTGAAGGCCGGGAAGTGACTCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102657.10 ENSMUST00000127889.2 |
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| CDS CAA 90 bp | GAGCGAACACGAGTCACTTCCCGGCCTTCACCCTGGGCCACCACCTaGGGGTCTGTGTACTCGGGTCGCCGTCCCATGAACCAGCTTGTG | + |
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Preference number: 6 (lower is better) Translates to: ERTRVTSRPSPWATT*GSVYSGRRPMNQLV Trigger: CACAAGCTGGTTCATGGGACGGCGACCCGAGTACACAGACCCCAAGGTGGTGGCCCAGGGTGAAGGCCGGGAAGTGACTCGTGTTCGCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102657.10 ENSMUST00000127889.2 |
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| CDS CAA 72 bp | TGGGTTGCCCTGTGGCAGGCTAGGACCCAGGACTCCTaGTGTGTCCACAGGCCCAGTATCATAGCCCAGCTT | + |
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Preference number: 6 (lower is better) Translates to: WVALWQARTQDS*CVHRPSIIAQL Trigger: AAGCTGGGCTATGATACTGGGCCTGTGGACACACAAGGAGTCCTGGGTCCTAGCCTGCCACAGGGCAACCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102657.10 ENSMUST00000127889.2 |
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| CDS GCA 72 bp | CCTTTTGTGCCGTCCTGGAGAGAGGGGCACATGCACTaGTCCATAGCCTCGGACGACATCATTCCCAAACAC | + |
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Preference number: 6 (lower is better) Translates to: PFVPSWREGHMH*SIASDDIIPKH Trigger: GTGTTTGGGAATGATGTCGTCCGAGGCTATGGAGCAGTGCATGTGCCCCTCTCTCCAGGACGGCACAAAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102657.10 |
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| CDS CAA 72 bp | GATGTAGACTCTGGCACAAACATGGGGATGGTCCTTTaGTGCCGTCCTGGAGAGAGGGGCACATGCACTGCT | + |
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Preference number: 6 (lower is better) Translates to: DVDSGTNMGMVL*CRPGERGTCTA Trigger: AGCAGTGCATGTGCCCCTCTCTCCAGGACGGCACAAAAGGACCATCCCCATGTTTGTGCCAGAGTCTACATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102657.10 |
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| CDS TCA 72 bp | TTGGTCACCACATTGAAGAGGAGGGTAACAAATCCCTaGGAGCGAACACGAGTCACTTCCCGGCCTTCACCC | + |
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Preference number: 6 (lower is better) Translates to: LVTTLKRRVTNP*ERTRVTSRPSP Trigger: GGGTGAAGGCCGGGAAGTGACTCGTGTTCGCTCTCAGGGATTTGTTACCCTCCTCTTCAATGTGGTGACCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102657.10 ENSMUST00000127889.2 |
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| CDS GCA 72 bp | AGGTCATCATACTCTGGAAACTGTGCGCTCTCTACCTaGCCGGTGATCATGAGCAGGAAGACGCTGGGACTT | + |
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Preference number: 6 (lower is better) Translates to: RSSYSGNCALST*PVIMSRKTLGL Trigger: AAGTCCCAGCGTCTTCCTGCTCATGATCACCGGGCAGGTAGAGAGCGCACAGTTTCCAGAGTATGATGACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102657.10 |
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| CDS GCA 72 bp | TTGGGGCCCAGTCCTGGCCATACACAAAGCAGTACTTaGAGTAGAGGTCATCATACTCTGGAAACTGTGCGC | + |
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Preference number: 6 (lower is better) Translates to: LGPSPGHTQSST*SRGHHTLETVR Trigger: GCGCACAGTTTCCAGAGTATGATGACCTCTACTGCAAGTACTGCTTTGTGTATGGCCAGGACTGGGCCCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102657.10 |
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| CDS CCA 72 bp | ATGGGGAAGTTCCACACCAGTGCTTGCCGTACATCTTaGCTCTTAGATGCTATCTGTGAGATCCCCTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: MGKFHTSACRTS*LLDAICEIPSS Trigger: GGAGGAGGGGATCTCACAGATAGCATCTAAGAGCCAAGATGTACGGCAAGCACTGGTGTGGAACTTCCCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102657.10 |
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| CDS CCA 72 bp | CCTGAAACAAATGTTTTCATAGAGAGATGTGCGTCCTaGAGAGAGGGGCACATGCACTGCTCCATAGCCTCG | + |
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Preference number: 6 (lower is better) Translates to: PETNVFIERCAS*REGHMHCSIAS Trigger: CGAGGCTATGGAGCAGTGCATGTGCCCCTCTCTCCAGGACGCACATCTCTCTATGAAAACATTTGTTTCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127889.2 |
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| CDS GCA 72 bp | AAGGTCACATCGATGGGGAAGTTCCACACCAGTGCTTaGCGTACATCTTGGCTCTTAGATGCTATCTGTGAG | + |
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Preference number: 6 (lower is better) Translates to: KVTSMGKFHTSA*RTSWLLDAICE Trigger: CTCACAGATAGCATCTAAGAGCCAAGATGTACGGCAAGCACTGGTGTGGAACTTCCCCATCGATGTGACCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102657.10 |
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| CDS CCA 72 bp | CACAAAGCAGTACTTGCAGTAGAGGTCATCATACTCTaGAAACTGTGCGCTCTCTACCTGCCCGGTGATCAT | + |
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Preference number: 6 (lower is better) Translates to: HKAVLAVEVIIL*KLCALYLPGDH Trigger: ATGATCACCGGGCAGGTAGAGAGCGCACAGTTTCCAGAGTATGATGACCTCTACTGCAAGTACTGCTTTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102657.10 |
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| CDS CCA 72 bp | AAACACATCCGGCCCATAGACACTGAGTACAATCTGTaGCCAGCCATAGGGGTTGGTACTTTTAAAGGTCAC | + |
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Preference number: 6 (lower is better) Translates to: KHIRPIDTEYNL*PAIGVGTFKGH Trigger: GTGACCTTTAAAAGTACCAACCCCTATGGCTGGCCACAGATTGTACTCAGTGTCTATGGGCCGGATGTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102657.10 |
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| CDS GCA 72 bp | TTTAAAGGTCACATCGATGGGGAAGTTCCACACCAGTaGTTGCCGTACATCTTGGCTCTTAGATGCTATCTG | + |
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Preference number: 6 (lower is better) Translates to: FKGHIDGEVPHQ*LPYILALRCYL Trigger: CAGATAGCATCTAAGAGCCAAGATGTACGGCAAGCACTGGTGTGGAACTTCCCCATCGATGTGACCTTTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102657.10 |
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