Pregenerated sensors for B4GAT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047379Ensembl transcript IDs: ENSMUST00000053705.8, ENSMUST00000235776.2
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGTGGAGGCATGTTTCTTACCCCAGTCAGGCCTGGAGCCAGATACTaGCAATTCTCAGACCATGGAAGACAAGGACTCAGCATCGGTGGG | + |
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Preference number: 1 (lower is better) Translates to: SGGMFLTPVRPGARY*QFSDHGRQGLSIGG Trigger: CCCACCGATGCTGAGTCCTTGTCTTCCATGGTCTGAGAATTGTCAGTATCTGGCTCCAGGCCTGACTGGGGTAAGAAACATGCCTCCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235776.2 |
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| 3UTR CCA 90 bp | CATAGTCAAGTCCAGTGTTCCAAACCCATAGCTACCTCTGTAAAGTaGAGGCATGTTTCTTACCCCAGTCAGGCCTGGAGCCAGATACTG | + |
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Preference number: 1 (lower is better) Translates to: HSQVQCSKPIATSVK*RHVSYPSQAWSQIL Trigger: CAGTATCTGGCTCCAGGCCTGACTGGGGTAAGAAACATGCCTCCACTTTACAGAGGTAGCTATGGGTTTGGAACACTGGACTTGACTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| 3UTR CCA 90 bp | GCTACCTCTGTAAAGTGGAGGCATGTTTCTTACCCCAGTCAGGCCTaGAGCCAGATACTGACAATTCTCAGACCATGGAAGACAAGGACT | + |
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Preference number: 1 (lower is better) Translates to: ATSVKWRHVSYPSQA*SQILTILRPWKTRT Trigger: AGTCCTTGTCTTCCATGGTCTGAGAATTGTCAGTATCTGGCTCCAGGCCTGACTGGGGTAAGAAACATGCCTCCACTTTACAGAGGTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235776.2 |
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| 3UTR GCA 90 bp | AAACACTCAAGCTTCCCACCTCTAGCCCATTCAAACTTTTTGCTCTaGCGCTATCCACCCAACATGGTTAATAGTAACAATATCATAATA | + |
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Preference number: 1 (lower is better) Translates to: KHSSFPPLAHSNFLL*RYPPNMVNSNNIII Trigger: TATTATGATATTGTTACTATTAACCATGTTGGGTGGATAGCGGCAGAGCAAAAAGTTTGAATGGGCTAGAGGTGGGAAGCTTGAGTGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| 3UTR-3UTR TCA 90 bp | CTCTTTCCTCCTTCAGGGATCTCGGAGGGCGGAGGGCGAAGGCATGAGAGAACGTCCCCAGGGCCCACATaGTCATCCCTAAAGTTCCAC | + |
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Preference number: 2 (lower is better) Translates to: LFPPSGISEGGGRRHERTSPGPT*SSLKFH Trigger: GTGGAACTTTAGGGATGATCATGTGGGCCCTGGGGA...CGTTCTCTCATGCCTTCGCCCTCCGCCCTCCGAGATCCCTGAAGGAGGAAAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235776.2 |
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| 3UTR-3UTR CCA 90 bp | CTCTTTCCTCCTTCAGGGATCTCGGAGGGCGGAGGGCGAAGGCATGAGAGAACGACAATTCTCAGACCATaGAAGACAAGGACTCAGCAT | + |
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Preference number: 2 (lower is better) Translates to: LFPPSGISEGGGRRHERTTILRP*KTRTQH Trigger: ATGCTGAGTCCTTGTCTTCCATGGTCTGAGAATTGT...CGTTCTCTCATGCCTTCGCCCTCCGCCCTCCGAGATCCCTGAAGGAGGAAAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235776.2 |
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| 3UTR-3UTR TCA 90 bp | TCTGGGACTTTAACCTTTATCTCTTTCCTCCTTCAGGGATCTCGGAGGGCGGAGGGTAAAGCTGAGACTTaGCTCCCAGCACCCCATAGT | + |
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Preference number: 2 (lower is better) Translates to: SGTLTFISFLLQGSRRAEGKAET*LPAPHS Trigger: ACTATGGGGTGCTGGGAGTCAAGTCTCAGCTTTACC...CTCCGCCCTCCGAGATCCCTGAAGGAGGAAAGAGATAAAGGTTAAAGTCCCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| 3UTR-3UTR TCA 90 bp | TTTATCTCTTTCCTCCTTCAGGGATCTCGGAGGGCGGAGGGCGAAGGCATGAGACCTTCAACTCCTGTTTaGACTGGCGGTAAAGGATCT | + |
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Preference number: 2 (lower is better) Translates to: FISFLLQGSRRAEGEGMRPSTPV*TGGKGS Trigger: AGATCCTTTACCGCCAGTTCAAACAGGAGTTGAAGG...TCTCATGCCTTCGCCCTCCGCCCTCCGAGATCCCTGAAGGAGGAAAGAGATAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235776.2 |
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| 3UTR-3UTR CCA 90 bp | CTCCCAGCACCCCATAGTCAAGTCCAGTGTTCCAAACCCATAGCTACCTCTGTATACCCCAGTCAGGCCTaGAGCCAGATACTGACAATT | + |
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Preference number: 2 (lower is better) Translates to: LPAPHSQVQCSKPIATSVYPSQA*SQILTI Trigger: AATTGTCAGTATCTGGCTCCAGGCCTGACTGGGGTA...TACAGAGGTAGCTATGGGTTTGGAACACTGGACTTGACTATGGGGTGCTGGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| 3UTR-3UTR GCA 90 bp | TCTGGGACTTTAACCTTTATCTCTTTCCTCCTTCAGGGATCTCGGAGGGCGGAGCTCAAAATTAAACCCTaGCACGTGCAGCTCACAAGC | + |
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Preference number: 2 (lower is better) Translates to: SGTLTFISFLLQGSRRAELKIKP*HVQLTS Trigger: GCTTGTGAGCTGCACGTGGCAGGGTTTAATTTTGAG...CTCCGCCCTCCGAGATCCCTGAAGGAGGAAAGAGATAAAGGTTAAAGTCCCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235776.2 |
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| 3UTR-3UTR TCA 90 bp | GCGTCTCATCTGAGCCAACAGTTCTGTGAGGTAGGTATTTTCACCTCCCTTTTTGGTAAAGCTGAGACTTaGCTCCCAGCACCCCATAGT | + |
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Preference number: 2 (lower is better) Translates to: ASHLSQQFCEVGIFTSLFGKAET*LPAPHS Trigger: ACTATGGGGTGCTGGGAGTCAAGTCTCAGCTTTACC...AAAAAGGGAGGTGAAAATACCTACCTCACAGAACTGTTGGCTCAGATGAGACGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| 3UTR-3UTR GCA 90 bp | GTAAAGCTGAGACTTGACTCCCAGCACCCCATAGTCAAGTCCAGTGTTCCAAACCCCATTCAAACTTTTTaGTCTGCCGCTATCCACCCA | + |
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Preference number: 2 (lower is better) Translates to: VKLRLDSQHPIVKSSVPNPIQTF*SAAIHP Trigger: TGGGTGGATAGCGGCAGAGCAAAAAGTTTGAATGGG...GTTTGGAACACTGGACTTGACTATGGGGTGCTGGGAGTCAAGTCTCAGCTTTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| 3UTR-3UTR GCA 90 bp | ACTTTAACCTTTATCTCTTTCCTCCTTCAGGGATCTCGGAGGGCGGAGGGCGAAGGGATGGAACTTCAATaGCTCCTTGAATCCCTTATG | + |
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Preference number: 2 (lower is better) Translates to: TLTFISFLLQGSRRAEGEGMELQ*LLESLM Trigger: CATAAGGGATTCAAGGAGGCATTGAAGTTCCATCCC...TTCGCCCTCCGCCCTCCGAGATCCCTGAAGGAGGAAAGAGATAAAGGTTAAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235776.2 |
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| 3UTR-3UTR CCA 90 bp | CTGAGCCAACAGTTCTGTGAGGTAGGTATTTTCACCTCCCTTTTTACAGACGGCTACCCCAGTCAGGCCTaGAGCCAGATACTGACAATT | + |
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Preference number: 2 (lower is better) Translates to: LSQQFCEVGIFTSLFTDGYPSQA*SQILTI Trigger: AATTGTCAGTATCTGGCTCCAGGCCTGACTGGGGTA...GCCGTCTGTAAAAAGGGAGGTGAAAATACCTACCTCACAGAACTGTTGGCTCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| 3UTR-3UTR GCA 90 bp | GGAGGGCGAAGGCATGAGAGAACGGGAAACGTTCTTAGCACTACATTCTACGTTTCAAACTTTTTGCTCTaGCGCTATCCACCCAACATG | + |
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Preference number: 2 (lower is better) Translates to: GGRRHERTGNVLSTTFYVSNFLL*RYPPNM Trigger: CATGTTGGGTGGATAGCGGCAGAGCAAAAAGTTTGA...AACGTAGAATGTAGTGCTAAGAACGTTTCCCGTTCTCTCATGCCTTCGCCCTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGGGCGAAGGCATGAGAGAACGGGAAACGTTCTTAGCACTACATTCTACGTTTTTTCAGCCTCCTTTTaGGGATGGAACTTCAATGCC | + |
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Preference number: 2 (lower is better) Translates to: GGRRHERTGNVLSTTFYVFSASF*GWNFNA Trigger: GGCATTGAAGTTCCATCCCCAAAAGGAGGCTGAAAA...AACGTAGAATGTAGTGCTAAGAACGTTTCCCGTTCTCTCATGCCTTCGCCCTCC 48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000235776.2 |
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| 3UTR-3UTR TCA 90 bp | CACAGATCTGGGACTTTAACCTTTATCTCTTTCCTCCTTCAGGGATCTCGGAGGTCCTTGAATCCCTTATaGACCAGAAAACCTTCGTTC | + |
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Preference number: 2 (lower is better) Translates to: HRSGTLTFISFLLQGSRRSLNPL*TRKPSF Trigger: GAACGAAGGTTTTCTGGTTCATAAGGGATTCAAGGA...CCTCCGAGATCCCTGAAGGAGGAAAGAGATAAAGGTTAAAGTCCCAGATCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235776.2 |
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| 3UTR-3UTR CCA 90 bp | AGAACGGGAAACGTTCTTAGCACTACATTCTACGTTTTCATCTTTCTTTCCAAAAGCAGCCCAACCTACTaGAGGGCACAGATCTGGGAC | + |
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Preference number: 2 (lower is better) Translates to: RTGNVLSTTFYVFIFLSKSSPTY*RAQIWD Trigger: GTCCCAGATCTGTGCCCTCCAGTAGGTTGGGCTGCT...TTTGGAAAGAAAGATGAAAACGTAGAATGTAGTGCTAAGAACGTTTCCCGTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| 3UTR-3UTR CCA 90 bp | CACAGATCTGGGACTTTAACCTTTATCTCTTTCCTCCTTCAGGGATCTCGGAGGGCTATCCACCCAACATaGTTAATAGTAACAATATCA | + |
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Preference number: 2 (lower is better) Translates to: HRSGTLTFISFLLQGSRRAIHPT*LIVTIS Trigger: TGATATTGTTACTATTAACCATGTTGGGTGGATAGC...CCTCCGAGATCCCTGAAGGAGGAAAGAGATAAAGGTTAAAGTCCCAGATCTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| 3UTR-3UTR TCA 90 bp | GAACGGGAAACGTTCTTAGCACTACATTCTACGTTTTCATCTTTCTTTCCAAAAGAGCCAACAGTTCTGTaGGGTAGGTATTTTCACCTC | + |
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Preference number: 2 (lower is better) Translates to: ERETFLALHSTFSSFFPKEPTVL*GRYFHL Trigger: GAGGTGAAAATACCTACCTCACAGAACTGTTGGCTC...TTTTGGAAAGAAAGATGAAAACGTAGAATGTAGTGCTAAGAACGTTTCCCGTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| 3UTR-3UTR GCA 90 bp | GAACGGGAAACGTTCTTAGCACTACATTCTACGTTTTCATCTTTCTTTCCAAAATCAAACTTTTTGCTCTaGCGCTATCCACCCAACATG | + |
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Preference number: 2 (lower is better) Translates to: ERETFLALHSTFSSFFPKSNFLL*RYPPNM Trigger: CATGTTGGGTGGATAGCGGCAGAGCAAAAAGTTTGA...TTTTGGAAAGAAAGATGAAAACGTAGAATGTAGTGCTAAGAACGTTTCCCGTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| 3UTR-3UTR GCA 90 bp | GAACGGGAAACGTTCTTAGCACTACATTCTACGTTTTCATCTTTCTTTCCAAAAGGTAAAGGATCTTATTaGGCTGGTTTTCAGCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: ERETFLALHSTFSSFFPKGKGSY*AGFQPP Trigger: AGGAGGCTGAAAACCAGCGCAATAAGATCCTTTACC...TTTTGGAAAGAAAGATGAAAACGTAGAATGTAGTGCTAAGAACGTTTCCCGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000235776.2 |
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| 3UTR TCA 72 bp | AAGGCCACACAGCTAGTTAGTGGTAAAGCTGAGACTTaGCTCCCAGCACCCCATAGTCAAGTCCAGTGTTCC | + |
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Preference number: 3 (lower is better) Translates to: KATQLVSGKAET*LPAPHSQVQCS Trigger: GGAACACTGGACTTGACTATGGGGTGCTGGGAGTCAAGTCTCAGCTTTACCACTAACTAGCTGTGTGGCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| 3UTR TCA 72 bp | ATGTTTCTTACCCCAGTCAGGCCTGGAGCCAGATACTaGCAATTCTCAGACCATGGAAGACAAGGACTCAGC | + |
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Preference number: 3 (lower is better) Translates to: MFLTPVRPGARY*QFSDHGRQGLS Trigger: GCTGAGTCCTTGTCTTCCATGGTCTGAGAATTGTCAGTATCTGGCTCCAGGCCTGACTGGGGTAAGAAACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235776.2 |
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| 3UTR CCA 72 bp | GTAAAGTGGAGGCATGTTTCTTACCCCAGTCAGGCCTaGAGCCAGATACTGACAATTCTCAGACCATGGAAG | + |
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Preference number: 3 (lower is better) Translates to: VKWRHVSYPSQA*SQILTILRPWK Trigger: CTTCCATGGTCTGAGAATTGTCAGTATCTGGCTCCAGGCCTGACTGGGGTAAGAAACATGCCTCCACTTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| 3UTR CCA 72 bp | CAAATGAGCAGCCCAACCTACTGGAGGGCACAGATCTaGGACTTTAACCTTTATCTCTTTCCTCCTTCAGGG | + |
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Preference number: 3 (lower is better) Translates to: QMSSPTYWRAQI*DFNLYLFPPSG Trigger: CCCTGAAGGAGGAAAGAGATAAAGGTTAAAGTCCCAGATCTGTGCCCTCCAGTAGGTTGGGCTGCTCATTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| 3UTR CCA 72 bp | AATGTCATCCGAAGGCAAATGAGCAGCCCAACCTACTaGAGGGCACAGATCTGGGACTTTAACCTTTATCTC | + |
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Preference number: 3 (lower is better) Translates to: NVIRRQMSSPTY*RAQIWDFNLYL Trigger: GAGATAAAGGTTAAAGTCCCAGATCTGTGCCCTCCAGTAGGTTGGGCTGCTCATTTGCCTTCGGATGACATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| 3UTR-3UTR CAA 90 bp | AGAGTTGGGGTACCTAGCCTTCAACTCCTGTTTGAACTGGCGGTAAAGGATCTTGTTTTCAGCCTCCTTTaGGGGATGGAACTTCAATGC | + |
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Preference number: 3 (lower is better) Translates to: RVGVPSLQLLFELAVKDLVFSLL*GMELQC Trigger: GCATTGAAGTTCCATCCCCAAAAGGAGGCTGAAAAC...AAGATCCTTTACCGCCAGTTCAAACAGGAGTTGAAGGCTAGGTACCCCAACTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000235776.2 |
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| 3UTR TCA 72 bp | AATCACAATAACTTAATGATATCCCCAGGGCCCACATaGTCATCCCTAAAGTTCCACTCCACTGTCCTCAAT | + |
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Preference number: 3 (lower is better) Translates to: NHNNLMISPGPT*SSLKFHSTVLN Trigger: ATTGAGGACAGTGGAGTGGAACTTTAGGGATGATCATGTGGGCCCTGGGGATATCATTAAGTTATTGTGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235776.2 |
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| CDS-3UTR GCA 90 bp | CTCTTTCCTCCTTCAGGGATCTCGGAGGGCGGAGGGCGAAGGCATGAGAGAACGAGCACCGTGGCCAGCTaGGCCTCCTCTTTGGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: LFPPSGISEGGGRRHERTSTVAS*ASSLVA Trigger: GGCCACCAAAGAGGAGGCGCAGCTGGCCACGGTGCT...CGTTCTCTCATGCCTTCGCCCTCCGCCCTCCGAGATCCCTGAAGGAGGAAAGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS-3UTR GCA 90 bp | AAGCTGAGACTTGACTCCCAGCACCCCATAGTCAAGTCCAGTGTTCCAAACCCAGAGGGGCACACGAGGTaGATGGCGACCCTGGCGCGC | + |
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Preference number: 4 (lower is better) Translates to: KLRLDSQHPIVKSSVPNPEGHTR*MATLAR Trigger: GCGCGCCAGGGTCGCCATGCACCTCGTGTGCCCCTC...TGGGTTTGGAACACTGGACTTGACTATGGGGTGCTGGGAGTCAAGTCTCAGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS-3UTR GCA 90 bp | ACCTTTATCTCTTTCCTCCTTCAGGGATCTCGGAGGGCGGAGGGCGAAGGCATGTGCTCCTCCTGGCCGTaGAGTCCAGAGAGCAGCGAT | + |
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Preference number: 4 (lower is better) Translates to: TFISFLLQGSRRAEGEGMCSSWP*SPESSD Trigger: ATCGCTGCTCTCTGGACTGCACGGCCAGGAGGAGCA...CATGCCTTCGCCCTCCGCCCTCCGAGATCCCTGAAGGAGGAAAGAGATAAAGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS-3UTR GCA 90 bp | GGAGGGCGAAGGCATGAGAGAACGGGAAACGTTCTTAGCACTACATTCTACGTTGAGGGGCACACGAGGTaGATGGCGACCCTGGCGCGC | + |
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Preference number: 4 (lower is better) Translates to: GGRRHERTGNVLSTTFYVEGHTR*MATLAR Trigger: GCGCGCCAGGGTCGCCATGCACCTCGTGTGCCCCTC...AACGTAGAATGTAGTGCTAAGAACGTTTCCCGTTCTCTCATGCCTTCGCCCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS-3UTR GCA 90 bp | CTCTTTCCTCCTTCAGGGATCTCGGAGGGCGGAGGGCGAAGGCATGAGAGAACGGCGCATGGCAAGGCGTaGACAGCCCATAATAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: LFPPSGISEGGGRRHERTAHGKA*TAHNRR Trigger: CCTTCTATTATGGGCTGTGCACGCCTTGCCATGCGC...CGTTCTCTCATGCCTTCGCCCTCCGCCCTCCGAGATCCCTGAAGGAGGAAAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS-3UTR CCA 90 bp | AAGCTGAGACTTGACTCCCAGCACCCCATAGTCAAGTCCAGTGTTCCAAACCCAGGTGCATGGCGACCCTaGCGCGCATCTCGGGGCAGT | + |
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Preference number: 4 (lower is better) Translates to: KLRLDSQHPIVKSSVPNPGAWRP*RASRGS Trigger: ACTGCCCCGAGATGCGCGCCAGGGTCGCCATGCACC...TGGGTTTGGAACACTGGACTTGACTATGGGGTGCTGGGAGTCAAGTCTCAGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS-3UTR GCA 90 bp | AACCTTTATCTCTTTCCTCCTTCAGGGATCTCGGAGGGCGGAGGGCGAAGGCATTGCTCCTCCTGGCCGTaGAGTCCAGAGAGCAGCGAT | + |
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Preference number: 4 (lower is better) Translates to: NLYLFPPSGISEGGGRRHCSSWP*SPESSD Trigger: ATCGCTGCTCTCTGGACTGCACGGCCAGGAGGAGCA...ATGCCTTCGCCCTCCGCCCTCCGAGATCCCTGAAGGAGGAAAGAGATAAAGGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS-3UTR GCA 90 bp | CTCCCAGCACCCCATAGTCAAGTCCAGTGTTCCAAACCCATAGCTACCTCTGTAAGCACCGTGGCCAGCTaGGCCTCCTCTTTGGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: LPAPHSQVQCSKPIATSVSTVAS*ASSLVA Trigger: GGCCACCAAAGAGGAGGCGCAGCTGGCCACGGTGCT...TACAGAGGTAGCTATGGGTTTGGAACACTGGACTTGACTATGGGGTGCTGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS-3UTR CCA 90 bp | TTTATCTCTTTCCTCCTTCAGGGATCTCGGAGGGCGGAGGGCGAAGGCATGAGATGTTCCTGCTCCTCCTaGCCGTGCAGTCCAGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: FISFLLQGSRRAEGEGMRCSCSS*PCSPES Trigger: GCTCTCTGGACTGCACGGCCAGGAGGAGCAGGAACA...TCTCATGCCTTCGCCCTCCGCCCTCCGAGATCCCTGAAGGAGGAAAGAGATAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS-3UTR CCA 90 bp | CAAACCCATAGCTACCTCTGTAAAGTGGAGGCATGTTTCTTACCCCAGTCAGGCGGTGCATGGCGACCCTaGCGCGCATCTCGGGGCAGT | + |
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Preference number: 4 (lower is better) Translates to: QTHSYLCKVEACFLPQSGGAWRP*RASRGS Trigger: ACTGCCCCGAGATGCGCGCCAGGGTCGCCATGCACC...GCCTGACTGGGGTAAGAAACATGCCTCCACTTTACAGAGGTAGCTATGGGTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS-3UTR CCA 90 bp | TTTATCTCTTTCCTCCTTCAGGGATCTCGGAGGGCGGAGGGCGAAGGCATGAGACAGCAAGCTCTCCTCTaGCAGGTTGACCCAGCGGGA | + |
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Preference number: 4 (lower is better) Translates to: FISFLLQGSRRAEGEGMRQQALL*QVDPAG Trigger: TCCCGCTGGGTCAACCTGCCAGAGGAGAGCTTGCTG...TCTCATGCCTTCGCCCTCCGCCCTCCGAGATCCCTGAAGGAGGAAAGAGATAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS-3UTR TCA 90 bp | AAGCTGAGACTTGACTCCCAGCACCCCATAGTCAAGTCCAGTGTTCCAAACCCAGCATTGCCACCAACATaGGCGCGGCCAGCAGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: KLRLDSQHPIVKSSVPNPALPPT*ARPAAA Trigger: AGCTGCTGCTGGCCGCGCTCATGTTGGTGGCAATGC...TGGGTTTGGAACACTGGACTTGACTATGGGGTGCTGGGAGTCAAGTCTCAGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS-3UTR CCA 90 bp | CTCCCAGCACCCCATAGTCAAGTCCAGTGTTCCAAACCCATAGCTACCTCTGTACGCGATAATCGCCGCTaGCATCTAGAACGCCTCCGG | + |
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Preference number: 4 (lower is better) Translates to: LPAPHSQVQCSKPIATSVRDNRR*HLERLR Trigger: CCGGAGGCGTTCTAGATGCCAGCGGCGATTATCGCG...TACAGAGGTAGCTATGGGTTTGGAACACTGGACTTGACTATGGGGTGCTGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS-3UTR CCA 90 bp | CTCCCAGCACCCCATAGTCAAGTCCAGTGTTCCAAACCCATAGCTACCTCTGTACGGGCTGGGCCACCCTaGCTAGCTTGTCAAAGACCT | + |
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Preference number: 4 (lower is better) Translates to: LPAPHSQVQCSKPIATSVRAGPP*LACQRP Trigger: AGGTCTTTGACAAGCTAGCCAGGGTGGCCCAGCCCG...TACAGAGGTAGCTATGGGTTTGGAACACTGGACTTGACTATGGGGTGCTGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS-3UTR TCA 90 bp | CTGAGCCAACAGTTCTGTGAGGTAGGTATTTTCACCTCCCTTTTTACAGACGGCGCATTGCCACCAACATaGGCGCGGCCAGCAGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: LSQQFCEVGIFTSLFTDGALPPT*ARPAAA Trigger: AGCTGCTGCTGGCCGCGCTCATGTTGGTGGCAATGC...GCCGTCTGTAAAAAGGGAGGTGAAAATACCTACCTCACAGAACTGTTGGCTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS-3UTR CCA 90 bp | CAGATCTGGGACTTTAACCTTTATCTCTTTCCTCCTTCAGGGATCTCGGAGGGCCGCGATAATCGCCGCTaGCATCTAGAACGCCTCCGG | + |
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Preference number: 4 (lower is better) Translates to: QIWDFNLYLFPPSGISEGRDNRR*HLERLR Trigger: CCGGAGGCGTTCTAGATGCCAGCGGCGATTATCGCG...GCCCTCCGAGATCCCTGAAGGAGGAAAGAGATAAAGGTTAAAGTCCCAGATCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS-3UTR CCA 90 bp | CACTCAAGCTTCCCACCTCTAGCCCATTCAAACTTTTTGCTCTGCCGCTATCCAGCGCCTCCTCTTTGGTaGCCGCGAACACTGAAACGG | + |
|
Preference number: 4 (lower is better) Translates to: HSSFPPLAHSNFLLCRYPAPPLW*PRTLKR Trigger: CCGTTTCAGTGTTCGCGGCCACCAAAGAGGAGGCGC...TGGATAGCGGCAGAGCAAAAAGTTTGAATGGGCTAGAGGTGGGAAGCTTGAGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS-3UTR CCA 90 bp | GTAAAGCTGAGACTTGACTCCCAGCACCCCATAGTCAAGTCCAGTGTTCCAAACCGGGCTGGGCCACCCTaGCTAGCTTGTCAAAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: VKLRLDSQHPIVKSSVPNRAGPP*LACQRP Trigger: AGGTCTTTGACAAGCTAGCCAGGGTGGCCCAGCCCG...GTTTGGAACACTGGACTTGACTATGGGGTGCTGGGAGTCAAGTCTCAGCTTTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| 3UTR CAA 72 bp | CCATGGAAGACAAGGACTCAGCATCGGTGGGGAGAGTaGGGGTACCTAGCCTTCAACTCCTGTTTGAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: PWKTRTQHRWGE*GYLAFNSCLNW Trigger: CCAGTTCAAACAGGAGTTGAAGGCTAGGTACCCCAACTCTCCCCACCGATGCTGAGTCCTTGTCTTCCATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235776.2 |
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| CDS-3UTR GCA 90 bp | CATGTTTCTTACCCCAGTCAGGCCTGGAGCCAGATACTGACAATTCTCAGACCACGGAGGCCAGTGCGGTaGGGAGTTGAGACTTTACCT | + |
|
Preference number: 4 (lower is better) Translates to: HVSYPSQAWSQILTILRPRRPVR*GVETLP Trigger: AGGTAAAGTCTCAACTCCGCACCGCACTGGCCTCCG...TGGTCTGAGAATTGTCAGTATCTGGCTCCAGGCCTGACTGGGGTAAGAAACATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS-3UTR GCA 90 bp | CATGTTTCTTACCCCAGTCAGGCCTGGAGCCAGATACTGACAATTCTCAGACCACCGGCGGATTTCAAATaGAGGCACCACCAGGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HVSYPSQAWSQILTILRPPADFK*RHHQGC Trigger: ACAGCCCTGGTGGTGCCTGCATTTGAAATCCGCCGG...TGGTCTGAGAATTGTCAGTATCTGGCTCCAGGCCTGACTGGGGTAAGAAACATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS-3UTR CCA 90 bp | GCACCCCATAGTCAAGTCCAGTGTTCCAAACCCATAGCTACCTCTGTAAAGTGGGCTGCGCCTCCTCTTTaGTGGCCGCGAACACTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: APHSQVQCSKPIATSVKWAAPPL*WPRTLK Trigger: TTTCAGTGTTCGCGGCCACCAAAGAGGAGGCGCAGC...CCACTTTACAGAGGTAGCTATGGGTTTGGAACACTGGACTTGACTATGGGGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS-3UTR CCA 90 bp | ACACTCAAGCTTCCCACCTCTAGCCCATTCAAACTTTTTGCTCTGCCGCTATCCGCTGCGCCTCCTCTTTaGTGGCCGCGAACACTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TLKLPTSSPFKLFALPLSAAPPL*WPRTLK Trigger: TTTCAGTGTTCGCGGCCACCAAAGAGGAGGCGCAGC...GGATAGCGGCAGAGCAAAAAGTTTGAATGGGCTAGAGGTGGGAAGCTTGAGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS-3UTR GCA 90 bp | AGAGTTGGGGTACCTAGCCTTCAACTCCTGTTTGAACTGGCGGTAAAGGATCTTCCGGCGGATTTCAAATaGAGGCACCACCAGGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RVGVPSLQLLFELAVKDLPADFK*RHHQGC Trigger: ACAGCCCTGGTGGTGCCTGCATTTGAAATCCGCCGG...AAGATCCTTTACCGCCAGTTCAAACAGGAGTTGAAGGCTAGGTACCCCAACTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235776.2 |
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| CDS-3UTR CCA 90 bp | CTCCCAGCACCCCATAGTCAAGTCCAGTGTTCCAAACCCATAGCTACCTCTGTACATCGTTGGGGTCCATaGTGGTCTTCAATAGACCCC | + |
|
Preference number: 4 (lower is better) Translates to: LPAPHSQVQCSKPIATSVHRWGP*WSSIDP Trigger: GGGGTCTATTGAAGACCACCATGGACCCCAACGATG...TACAGAGGTAGCTATGGGTTTGGAACACTGGACTTGACTATGGGGTGCTGGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS-3UTR CCA 90 bp | TCTGGGACTTTAACCTTTATCTCTTTCCTCCTTCAGGGATCTCGGAGGGCGGAGCATCGTTGGGGTCCATaGTGGTCTTCAATAGACCCC | + |
|
Preference number: 4 (lower is better) Translates to: SGTLTFISFLLQGSRRAEHRWGP*WSSIDP Trigger: GGGGTCTATTGAAGACCACCATGGACCCCAACGATG...CTCCGCCCTCCGAGATCCCTGAAGGAGGAAAGAGATAAAGGTTAAAGTCCCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS-3UTR CCA 90 bp | GCGTCTCATCTGAGCCAACAGTTCTGTGAGGTAGGTATTTTCACCTCCCTTTTTGCGCCTCCTCTTTGGTaGCCGCGAACACTGAAACGG | + |
|
Preference number: 4 (lower is better) Translates to: ASHLSQQFCEVGIFTSLFAPPLW*PRTLKR Trigger: CCGTTTCAGTGTTCGCGGCCACCAAAGAGGAGGCGC...AAAAAGGGAGGTGAAAATACCTACCTCACAGAACTGTTGGCTCAGATGAGACGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS-3UTR CCA 90 bp | AGGATGTTTACACATACAGCGTCTCATCTGAGCCAACAGTTCTGTGAGGTAGGTCAGCAAGCTCTCCTCTaGCAGGTTGACCCAGCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RMFTHTASHLSQQFCEVGQQALL*QVDPAG Trigger: TCCCGCTGGGTCAACCTGCCAGAGGAGAGCTTGCTG...ACCTACCTCACAGAACTGTTGGCTCAGATGAGACGCTGTATGTGTAAACATCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS-3UTR CCA 90 bp | CTCCCAGCACCCCATAGTCAAGTCCAGTGTTCCAAACCCATAGCTACCTCTGTATCCAGCCACATAAAATaGTTCCCAGGGGTCCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPAPHSQVQCSKPIATSVSSHIK*FPGVPP Trigger: TGGAGGGACCCCTGGGAACCATTTTATGTGGCTGGA...TACAGAGGTAGCTATGGGTTTGGAACACTGGACTTGACTATGGGGTGCTGGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS-3UTR CCA 90 bp | CAGATCTGGGACTTTAACCTTTATCTCTTTCCTCCTTCAGGGATCTCGGAGGGCCGTTGGGGTCCATGGTaGTCTTCAATAGACCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QIWDFNLYLFPPSGISEGRWGPW*SSIDPC Trigger: ACAGGGGTCTATTGAAGACCACCATGGACCCCAACG...GCCCTCCGAGATCCCTGAAGGAGGAAAGAGATAAAGGTTAAAGTCCCAGATCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS-3UTR CCA 90 bp | CAGATCTGGGACTTTAACCTTTATCTCTTTCCTCCTTCAGGGATCTCGGAGGGCTCCAGCCACATAAAATaGTTCCCAGGGGTCCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QIWDFNLYLFPPSGISEGSSHIK*FPGVPP Trigger: TGGAGGGACCCCTGGGAACCATTTTATGTGGCTGGA...GCCCTCCGAGATCCCTGAAGGAGGAAAGAGATAAAGGTTAAAGTCCCAGATCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS-3UTR CCA 90 bp | AACCTTTATCTCTTTCCTCCTTCAGGGATCTCGGAGGGCGGAGGGCGAAGGCATTTTTCAGCCTCCTTTTaGGGATGGAACTTCAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: NLYLFPPSGISEGGGRRHFSASF*GWNFNA Trigger: GGCATTGAAGTTCCATCCCCAAAAGGAGGCTGAAAA...ATGCCTTCGCCCTCCGCCCTCCGAGATCCCTGAAGGAGGAAAGAGATAAAGGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053705.8 |
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| CDS-3UTR TCA 90 bp | CAAACTTTTTGCTCTGCCGCTATCCACCCAACATGGTTAATAGTAACAATATCAGGTGGCCGCGAACACTaGAACGGACAGCGGACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QTFCSAAIHPTWLIVTISGGREH*NGQRTL Trigger: GAGGGTCCGCTGTCCGTTTCAGTGTTCGCGGCCACC...TGATATTGTTACTATTAACCATGTTGGGTGGATAGCGGCAGAGCAAAAAGTTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS-3UTR CCA 90 bp | CAAACTTTTTGCTCTGCCGCTATCCACCCAACATGGTTAATAGTAACAATATCAGGCACACGAGGTGCATaGCGACCCTGGCGCGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: QTFCSAAIHPTWLIVTISGTRGA*RPWRAS Trigger: AGATGCGCGCCAGGGTCGCCATGCACCTCGTGTGCC...TGATATTGTTACTATTAACCATGTTGGGTGGATAGCGGCAGAGCAAAAAGTTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS-3UTR TCA 90 bp | GAACGGGAAACGTTCTTAGCACTACATTCTACGTTTTCATCTTTCTTTCCAAAAGGTGGCCGCGAACACTaGAACGGACAGCGGACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ERETFLALHSTFSSFFPKGGREH*NGQRTL Trigger: GAGGGTCCGCTGTCCGTTTCAGTGTTCGCGGCCACC...TTTTGGAAAGAAAGATGAAAACGTAGAATGTAGTGCTAAGAACGTTTCCCGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS-3UTR GCA 90 bp | GAAGTTTACAGGATGTTTACACATACAGCGTCTCATCTGAGCCAACAGTTCTGTCGGAGGCCAGTGCGGTaGGGAGTTGAGACTTTACCT | + |
|
Preference number: 4 (lower is better) Translates to: EVYRMFTHTASHLSQQFCRRPVR*GVETLP Trigger: AGGTAAAGTCTCAACTCCGCACCGCACTGGCCTCCG...ACAGAACTGTTGGCTCAGATGAGACGCTGTATGTGTAAACATCCTGTAAACTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS-3UTR CCA 90 bp | AGAACGGGAAACGTTCTTAGCACTACATTCTACGTTTTCATCTTTCTTTCCAAAGGCACACGAGGTGCATaGCGACCCTGGCGCGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: RTGNVLSTTFYVFIFLSKGTRGA*RPWRAS Trigger: AGATGCGCGCCAGGGTCGCCATGCACCTCGTGTGCC...TTTGGAAAGAAAGATGAAAACGTAGAATGTAGTGCTAAGAACGTTTCCCGTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS-3UTR CCA 90 bp | CTCCCAGCACCCCATAGTCAAGTCCAGTGTTCCAAACCCATAGCTACCTCTGTAAGGATCTTATTGCGCTaGTTTTCAGCCTCCTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LPAPHSQVQCSKPIATSVRILLR*FSASFW Trigger: CCAAAAGGAGGCTGAAAACCAGCGCAATAAGATCCT...TACAGAGGTAGCTATGGGTTTGGAACACTGGACTTGACTATGGGGTGCTGGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053705.8 |
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| CDS-3UTR GCA 90 bp | GAAGTTTACAGGATGTTTACACATACAGCGTCTCATCTGAGCCAACAGTTCTGTGCGCATGGCAAGGCGTaGACAGCCCATAATAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: EVYRMFTHTASHLSQQFCAHGKA*TAHNRR Trigger: CCTTCTATTATGGGCTGTGCACGCCTTGCCATGCGC...ACAGAACTGTTGGCTCAGATGAGACGCTGTATGTGTAAACATCCTGTAAACTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS-3UTR GCA 90 bp | CAGATCTGGGACTTTAACCTTTATCTCTTTCCTCCTTCAGGGATCTCGGAGGGCGGGATGGAACTTCAATaGCTCCTTGAATCCCTTATG | + |
|
Preference number: 4 (lower is better) Translates to: QIWDFNLYLFPPSGISEGGMELQ*LLESLM Trigger: CATAAGGGATTCAAGGAGGCATTGAAGTTCCATCCC...GCCCTCCGAGATCCCTGAAGGAGGAAAGAGATAAAGGTTAAAGTCCCAGATCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053705.8 |
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| CDS-3UTR TCA 90 bp | GAACGGGAAACGTTCTTAGCACTACATTCTACGTTTTCATCTTTCTTTCCAAAATCTCCTCTGGCAGGTTaGCCCAGCGGGAGTAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ERETFLALHSTFSSFFPKSPLAG*PSGSSW Trigger: CCAACTACTCCCGCTGGGTCAACCTGCCAGAGGAGA...TTTTGGAAAGAAAGATGAAAACGTAGAATGTAGTGCTAAGAACGTTTCCCGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS-3UTR TCA 90 bp | CATGTTTCTTACCCCAGTCAGGCCTGGAGCCAGATACTGACAATTCTCAGACCATCCTTGAATCCCTTATaGACCAGAAAACCTTCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HVSYPSQAWSQILTILRPSLNPL*TRKPSF Trigger: GAACGAAGGTTTTCTGGTTCATAAGGGATTCAAGGA...TGGTCTGAGAATTGTCAGTATCTGGCTCCAGGCCTGACTGGGGTAAGAAACATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053705.8 |
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| CDS-3UTR TCA 90 bp | AGGATGTTTACACATACAGCGTCTCATCTGAGCCAACAGTTCTGTGAGGTAGGTCCTTCAACTCCTGTTTaGACTGGCGGTAAAGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: RMFTHTASHLSQQFCEVGPSTPV*TGGKGS Trigger: AGATCCTTTACCGCCAGTTCAAACAGGAGTTGAAGG...ACCTACCTCACAGAACTGTTGGCTCAGATGAGACGCTGTATGTGTAAACATCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053705.8 |
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| CDS-3UTR GCA 90 bp | AGAACGGGAAACGTTCTTAGCACTACATTCTACGTTTTCATCTTTCTTTCCAAAGAGCAGCTGCAGCATTaGCACCAACATGAGCGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: RTGNVLSTTFYVFIFLSKEQLQH*HQHERG Trigger: GCCGCGCTCATGTTGGTGGCAATGCTGCAGCTGCTC...TTTGGAAAGAAAGATGAAAACGTAGAATGTAGTGCTAAGAACGTTTCCCGTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS-3UTR CCA 90 bp | GAACGGGAAACGTTCTTAGCACTACATTCTACGTTTTCATCTTTCTTTCCAAAATGTTCCTGCTCCTCCTaGCCGTGCAGTCCAGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ERETFLALHSTFSSFFPKCSCSS*PCSPES Trigger: GCTCTCTGGACTGCACGGCCAGGAGGAGCAGGAACA...TTTTGGAAAGAAAGATGAAAACGTAGAATGTAGTGCTAAGAACGTTTCCCGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| 3UTR CAA 72 bp | GTAAAGGATCTTATTGCGCTGGTTTTCAGCCTCCTTTaGGGGATGGAACTTCAATGCCTCCTTGAATCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VKDLIALVFSLL*GMELQCLLESL Trigger: AAGGGATTCAAGGAGGCATTGAAGTTCCATCCCCAAAAGGAGGCTGAAAACCAGCGCAATAAGATCCTTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235776.2 |
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| CDS-3UTR GCA 90 bp | CAAACTTTTTGCTCTGCCGCTATCCACCCAACATGGTTAATAGTAACAATATCAGGTAAAGGATCTTATTaGGCTGGTTTTCAGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QTFCSAAIHPTWLIVTISGKGSY*AGFQPP Trigger: AGGAGGCTGAAAACCAGCGCAATAAGATCCTTTACC...TGATATTGTTACTATTAACCATGTTGGGTGGATAGCGGCAGAGCAAAAAGTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053705.8 |
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| CDS CCA 90 bp | GGTCGGGCACAGCAGCCTCATAGCGCGAGGGGCACACGAGGTGCATaGCGACCCTGGCGCGCATCTCGGGGCAGTGGCTACTCAGCGCGT | + |
|
Preference number: 5 (lower is better) Translates to: GRAQQPHSARGTRGA*RPWRASRGSGYSAR Trigger: ACGCGCTGAGTAGCCACTGCCCCGAGATGCGCGCCAGGGTCGCCATGCACCTCGTGTGCCCCTCGCGCTATGAGGCTGCTGTGCCCGACC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS CCA 90 bp | CAGCAGCCTCATAGCGCGAGGGGCACACGAGGTGCATGGCGACCCTaGCGCGCATCTCGGGGCAGTGGCTACTCAGCGCGTAGGCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: QQPHSARGTRGAWRP*RASRGSGYSARRPA Trigger: TGCTGGCCTACGCGCTGAGTAGCCACTGCCCCGAGATGCGCGCCAGGGTCGCCATGCACCTCGTGTGCCCCTCGCGCTATGAGGCTGCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS CCA 90 bp | GTCCCTCCAGGGCACCACGTAGGCAGGTCTCAGCAAGCTCTCCTCTaGCAGGTTGACCCAGCGGGAGTAGTTGGTGGGCGCATGGCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: VPPGHHVGRSQQALL*QVDPAGVVGGRMAR Trigger: CCTTGCCATGCGCCCACCAACTACTCCCGCTGGGTCAACCTGCCAGAGGAGAGCTTGCTGAGACCTGCCTACGTGGTGCCCTGGAGGGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS TCA 90 bp | CCGCTGGCATCTAGAACGCCTCCGGAGGCCAGTGCGGTGCGGAGTTaGGACTTTACCTGGTCTACGGATCGCGGAGACGGCGGGAAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: PLASRTPPEASAVRS*DFTWSTDRGDGGKN Trigger: GTTCTTCCCGCCGTCTCCGCGATCCGTAGACCAGGTAAAGTCTCAACTCCGCACCGCACTGGCCTCCGGAGGCGTTCTAGATGCCAGCGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS TCA 90 bp | AGGGCACCACGTAGGCAGGTCTCAGCAAGCTCTCCTCTGGCAGGTTaGCCCAGCGGGAGTAGTTGGTGGGCGCATGGCAAGGCGTGCACA | + |
|
Preference number: 5 (lower is better) Translates to: RAPRRQVSASSPLAG*PSGSSWWAHGKACT Trigger: TGTGCACGCCTTGCCATGCGCCCACCAACTACTCCCGCTGGGTCAACCTGCCAGAGGAGAGCTTGCTGAGACCTGCCTACGTGGTGCCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS GCA 90 bp | GATAATCGCCGCTGGCATCTAGAACGCCTCCGGAGGCCAGTGCGGTaGGGAGTTGAGACTTTACCTGGTCTACGGATCGCGGAGACGGCG | + |
|
Preference number: 5 (lower is better) Translates to: DNRRWHLERLRRPVR*GVETLPGLRIAETA Trigger: CGCCGTCTCCGCGATCCGTAGACCAGGTAAAGTCTCAACTCCGCACCGCACTGGCCTCCGGAGGCGTTCTAGATGCCAGCGGCGATTATC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS TCA 90 bp | CAGAGAGCAGCGATAGGTAGAGCAGCTGCAGCATTGCCACCAACATaGGCGCGGCCAGCAGCAGCTGGTAGAAGGCGCATCGGATGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: QRAAIGRAAAALPPT*ARPAAAGRRRIGWR Trigger: ACGCCATCCGATGCGCCTTCTACCAGCTGCTGCTGGCCGCGCTCATGTTGGTGGCAATGCTGCAGCTGCTCTACCTATCGCTGCTCTCTG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS CCA 90 bp | CCATGGTGGTCTTCAATAGACCCCTGTAGACGCGATAATCGCCGCTaGCATCTAGAACGCCTCCGGAGGCCAGTGCGGTGCGGAGTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: PWWSSIDPCRRDNRR*HLERLRRPVRCGVE Trigger: CTCAACTCCGCACCGCACTGGCCTCCGGAGGCGTTCTAGATGCCAGCGGCGATTATCGCGTCTACAGGGGTCTATTGAAGACCACCATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS GCA 90 bp | TTCGGCGGGACCGGCGGATTTCAAATGCAGGCACCACCAGGGCTGTaGCATCCCAGTGATTGCTCTGATCCAACATTTCCCTCAGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: FGGTGGFQMQAPPGL*HPSDCSDPTFPSGL Trigger: GAGGCCTGAGGGAAATGTTGGATCAGAGCAATCACTGGGATGGCACAGCCCTGGTGGTGCCTGCATTTGAAATCCGCCGGTCCCGCCGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS GCA 90 bp | CTCGTTCTTGTTCATCGGCATTCGGCGGGACCGGCGGATTTCAAATaGAGGCACCACCAGGGCTGTGCCATCCCAGTGATTGCTCTGATC | + |
|
Preference number: 5 (lower is better) Translates to: LVLVHRHSAGPADFK*RHHQGCAIPVIALI Trigger: GATCAGAGCAATCACTGGGATGGCACAGCCCTGGTGGTGCCTGCATTTGAAATCCGCCGGTCCCGCCGAATGCCGATGAACAAGAACGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS CCA 90 bp | AAAGCGTTCGTCAAATGTGGGCACCTTTCCTCCAGCCACATAAAATaGTTCCCAGGGGTCCCTCCAGGGCACCACGTAGGCAGGTCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: KAFVKCGHLSSSHIK*FPGVPPGHHVGRSQ Trigger: CTGAGACCTGCCTACGTGGTGCCCTGGAGGGACCCCTGGGAACCATTTTATGTGGCTGGAGGAAAGGTGCCCACATTTGACGAACGCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS CCA 90 bp | GCCCTTCGCTGGGCACCATGTCCACATCAATCACCAGGGCGTAGTTaGCCTCTTCCCGAGCCAGATTCCTTAACAGGTTATTGGGATAGG | + |
|
Preference number: 5 (lower is better) Translates to: ALRWAPCPHQSPGRS*PLPEPDSLTGYWDR Trigger: CCTATCCCAATAACCTGTTAAGGAATCTGGCTCGGGAAGAGGCCAACTACGCCCTGGTGATTGATGTGGACATGGTGCCCAGCGAAGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS-3UTR CAA 90 bp | TTTATCTCTTTCCTCCTTCAGGGATCTCGGAGGGCGGAGGGCGAAGGCATGAGAGCTAAGATGACATCGTaGGGGTCCATGGTGGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FISFLLQGSRRAEGEGMRAKMTS*GSMVVF Trigger: GAAGACCACCATGGACCCCAACGATGTCATCTTAGC...TCTCATGCCTTCGCCCTCCGCCCTCCGAGATCCCTGAAGGAGGAAAGAGATAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS-3UTR CAA 90 bp | CATGTTTCTTACCCCAGTCAGGCCTGGAGCCAGATACTGACAATTCTCAGACCAAGCTGCGCCTCCTCTTaGGTGGCCGCGAACACTGAA | + |
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Preference number: 5 (lower is better) Translates to: HVSYPSQAWSQILTILRPSCASS*VAANTE Trigger: TTCAGTGTTCGCGGCCACCAAAGAGGAGGCGCAGCT...TGGTCTGAGAATTGTCAGTATCTGGCTCCAGGCCTGACTGGGGTAAGAAACATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS-3UTR CAA 90 bp | CATGTTTCTTACCCCAGTCAGGCCTGGAGCCAGATACTGACAATTCTCAGACCACTTGTCAAAGACCTCTaGGCAGGACCGCAGCAGGGC | + |
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Preference number: 5 (lower is better) Translates to: HVSYPSQAWSQILTILRPLVKDL*AGPQQG Trigger: GCCCTGCTGCGGTCCTGCCAAGAGGTCTTTGACAAG...TGGTCTGAGAATTGTCAGTATCTGGCTCCAGGCCTGACTGGGGTAAGAAACATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS GCA 90 bp | CGCTCCAGAAGTCCGGACAGGTGTAGTAGGTTGTCCACACTGGCATaGGTAGCTAAGATGACATCGTTGGGGTCCATGGTGGTCTTCAAT | + |
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Preference number: 5 (lower is better) Translates to: RSRSPDRCSRLSTLA*VAKMTSLGSMVVFN Trigger: ATTGAAGACCACCATGGACCCCAACGATGTCATCTTAGCTACGCATGCCAGTGTGGACAACCTACTACACCTGTCCGGACTTCTGGAGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS-3UTR CAA 90 bp | GTAAAGCTGAGACTTGACTCCCAGCACCCCATAGTCAAGTCCAGTGTTCCAAACGCCACCCTGGCTAGCTaGTCAAAGACCTCTTGGCAG | + |
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Preference number: 5 (lower is better) Translates to: VKLRLDSQHPIVKSSVPNATLAS*SKTSWQ Trigger: CTGCCAAGAGGTCTTTGACAAGCTAGCCAGGGTGGC...GTTTGGAACACTGGACTTGACTATGGGGTGCTGGGAGTCAAGTCTCAGCTTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS-3UTR CAA 90 bp | GCACCCCATAGTCAAGTCCAGTGTTCCAAACCCATAGCTACCTCTGTAAAGTGGTGCACCAGCTCGTTCTaGTTCATCGGCATTCGGCGG | + |
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Preference number: 5 (lower is better) Translates to: APHSQVQCSKPIATSVKWCTSSF*FIGIRR Trigger: CCGCCGAATGCCGATGAACAAGAACGAGCTGGTGCA...CCACTTTACAGAGGTAGCTATGGGTTTGGAACACTGGACTTGACTATGGGGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS-3UTR CAA 90 bp | CTCCCAGCACCCCATAGTCAAGTCCAGTGTTCCAAACCCATAGCTACCTCTGTAGCTAAGATGACATCGTaGGGGTCCATGGTGGTCTTC | + |
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Preference number: 5 (lower is better) Translates to: LPAPHSQVQCSKPIATSVAKMTS*GSMVVF Trigger: GAAGACCACCATGGACCCCAACGATGTCATCTTAGC...TACAGAGGTAGCTATGGGTTTGGAACACTGGACTTGACTATGGGGTGCTGGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS-3UTR CAA 90 bp | AGGATGTTTACACATACAGCGTCTCATCTGAGCCAACAGTTCTGTGAGGTAGGTAGCTGCGCCTCCTCTTaGGTGGCCGCGAACACTGAA | + |
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Preference number: 5 (lower is better) Translates to: RMFTHTASHLSQQFCEVGSCASS*VAANTE Trigger: TTCAGTGTTCGCGGCCACCAAAGAGGAGGCGCAGCT...ACCTACCTCACAGAACTGTTGGCTCAGATGAGACGCTGTATGTGTAAACATCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS GCA 90 bp | GCCCTCTCCCTTTTAAGTACCTGGCTGATTCGATTGAAACCATACTaGCGAAAGCGTTCGTCAAATGTGGGCACCTTTCCTCCAGCCACA | + |
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Preference number: 5 (lower is better) Translates to: ALSLLSTWLIRLKPY*RKRSSNVGTFPPAT Trigger: TGTGGCTGGAGGAAAGGTGCCCACATTTGACGAACGCTTTCGGCAGTATGGTTTCAATCGAATCAGCCAGGTACTTAAAAGGGAGAGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235776.2 |
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| CDS-3UTR CAA 90 bp | GAAGTTTACAGGATGTTTACACATACAGCGTCTCATCTGAGCCAACAGTTCTGTGCCACCCTGGCTAGCTaGTCAAAGACCTCTTGGCAG | + |
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Preference number: 5 (lower is better) Translates to: EVYRMFTHTASHLSQQFCATLAS*SKTSWQ Trigger: CTGCCAAGAGGTCTTTGACAAGCTAGCCAGGGTGGC...ACAGAACTGTTGGCTCAGATGAGACGCTGTATGTGTAAACATCCTGTAAACTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS-3UTR CAA 90 bp | CTGAGCCAACAGTTCTGTGAGGTAGGTATTTTCACCTCCCTTTTTACAGACGGCGCCTGGCTGATTCGATaGAAACCATACTGCCGAAAG | + |
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Preference number: 5 (lower is better) Translates to: LSQQFCEVGIFTSLFTDGAWLIR*KPYCRK Trigger: CTTTCGGCAGTATGGTTTCAATCGAATCAGCCAGGC...GCCGTCTGTAAAAAGGGAGGTGAAAATACCTACCTCACAGAACTGTTGGCTCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053705.8 |
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| CDS-3UTR CAA 90 bp | GCACCCCATAGTCAAGTCCAGTGTTCCAAACCCATAGCTACCTCTGTAAAGTGGGTTTTCAGCCTCCTTTaGGGGATGGAACTTCAATGC | + |
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Preference number: 5 (lower is better) Translates to: APHSQVQCSKPIATSVKWVFSLL*GMELQC Trigger: GCATTGAAGTTCCATCCCCAAAAGGAGGCTGAAAAC...CCACTTTACAGAGGTAGCTATGGGTTTGGAACACTGGACTTGACTATGGGGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053705.8 |
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| CDS CCA 90 bp | TTCAGCACCTCAAAATTAAACCCTGCCACGTGCAGCTCACAAGCCTaGCTGATTCGATTGAAACCATACTGCCGAAAGCGTTCGTCAAAT | + |
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Preference number: 5 (lower is better) Translates to: FSTSKLNPATCSSQA*LIRLKPYCRKRSSN Trigger: ATTTGACGAACGCTTTCGGCAGTATGGTTTCAATCGAATCAGCCAGGCTTGTGAGCTGCACGTGGCAGGGTTTAATTTTGAGGTGCTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053705.8 |
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| CDS CCA 90 bp | ACGCCTCCAGTCTTAGTCCTACATGCCCTCTCCCTTTTAAGTACCTaGCTGATTCGATTGAAACCATACTGCCGAAAGCGTTCGTCAAAT | + |
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Preference number: 5 (lower is better) Translates to: TPPVLVLHALSLLST*LIRLKPYCRKRSSN Trigger: ATTTGACGAACGCTTTCGGCAGTATGGTTTCAATCGAATCAGCCAGGTACTTAAAAGGGAGAGGGCATGTAGGACTAAGACTGGAGGCGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235776.2 |
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| CDS-3UTR CAA 90 bp | TTCCAAAAGCCTCATTTTATTAAACACTCAAGCTTCCCACCTCTAGCCCATTCATGCACCAGCTCGTTCTaGTTCATCGGCATTCGGCGG | + |
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Preference number: 5 (lower is better) Translates to: FQKPHFIKHSSFPPLAHSCTSSF*FIGIRR Trigger: CCGCCGAATGCCGATGAACAAGAACGAGCTGGTGCA...TGAATGGGCTAGAGGTGGGAAGCTTGAGTGTTTAATAAAATGAGGCTTTTGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS-3UTR CAA 90 bp | AGAACGGGAAACGTTCTTAGCACTACATTCTACGTTTTCATCTTTCTTTCCAAAACCTGGCTGATTCGATaGAAACCATACTGCCGAAAG | + |
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Preference number: 5 (lower is better) Translates to: RTGNVLSTTFYVFIFLSKTWLIR*KPYCRK Trigger: CTTTCGGCAGTATGGTTTCAATCGAATCAGCCAGGT...TTTGGAAAGAAAGATGAAAACGTAGAATGTAGTGCTAAGAACGTTTCCCGTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235776.2 |
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| CDS CCA 72 bp | CATAGCGCGAGGGGCACACGAGGTGCATGGCGACCCTaGCGCGCATCTCGGGGCAGTGGCTACTCAGCGCGT | + |
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Preference number: 6 (lower is better) Translates to: HSARGTRGAWRP*RASRGSGYSAR Trigger: ACGCGCTGAGTAGCCACTGCCCCGAGATGCGCGCCAGGGTCGCCATGCACCTCGTGTGCCCCTCGCGCTATG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS CCA 72 bp | CAGCAGCCTCATAGCGCGAGGGGCACACGAGGTGCATaGCGACCCTGGCGCGCATCTCGGGGCAGTGGCTAC | + |
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Preference number: 6 (lower is better) Translates to: QQPHSARGTRGA*RPWRASRGSGY Trigger: GTAGCCACTGCCCCGAGATGCGCGCCAGGGTCGCCATGCACCTCGTGTGCCCCTCGCGCTATGAGGCTGCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS TCA 72 bp | GGCCAGCTGCGCCTCCTCTTTGGTGGCCGCGAACACTaGAACGGACAGCGGACCCTCCCAGCGCTCCAGAAG | + |
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Preference number: 6 (lower is better) Translates to: GQLRLLFGGREH*NGQRTLPALQK Trigger: CTTCTGGAGCGCTGGGAGGGTCCGCTGTCCGTTTCAGTGTTCGCGGCCACCAAAGAGGAGGCGCAGCTGGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS GCA 72 bp | CCCAGCGGGAGTAGTTGGTGGGCGCATGGCAAGGCGTaGACAGCCCATAATAGAAGGGCCGGACTTCGCCCA | + |
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Preference number: 6 (lower is better) Translates to: PSGSSWWAHGKA*TAHNRRAGLRP Trigger: TGGGCGAAGTCCGGCCCTTCTATTATGGGCTGTGCACGCCTTGCCATGCGCCCACCAACTACTCCCGCTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS TCA 72 bp | TCTAGAACGCCTCCGGAGGCCAGTGCGGTGCGGAGTTaGGACTTTACCTGGTCTACGGATCGCGGAGACGGC | + |
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Preference number: 6 (lower is better) Translates to: SRTPPEASAVRS*DFTWSTDRGDG Trigger: GCCGTCTCCGCGATCCGTAGACCAGGTAAAGTCTCAACTCCGCACCGCACTGGCCTCCGGAGGCGTTCTAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS GCA 72 bp | CGCTGGCATCTAGAACGCCTCCGGAGGCCAGTGCGGTaGGGAGTTGAGACTTTACCTGGTCTACGGATCGCG | + |
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Preference number: 6 (lower is better) Translates to: RWHLERLRRPVR*GVETLPGLRIA Trigger: CGCGATCCGTAGACCAGGTAAAGTCTCAACTCCGCACCGCACTGGCCTCCGGAGGCGTTCTAGATGCCAGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS GCA 72 bp | CGCGGAGACGGCGGGAAGAACTCGAAATACTGTTCCTaGTCCTCCTGGCCGTGCAGTCCAGAGAGCAGCGAT | + |
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Preference number: 6 (lower is better) Translates to: RGDGGKNSKYCS*SSWPCSPESSD Trigger: ATCGCTGCTCTCTGGACTGCACGGCCAGGAGGAGCAGGAACAGTATTTCGAGTTCTTCCCGCCGTCTCCGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS CCA 72 bp | TCTTCAATAGACCCCTGTAGACGCGATAATCGCCGCTaGCATCTAGAACGCCTCCGGAGGCCAGTGCGGTGC | + |
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Preference number: 6 (lower is better) Translates to: SSIDPCRRDNRR*HLERLRRPVRC Trigger: GCACCGCACTGGCCTCCGGAGGCGTTCTAGATGCCAGCGGCGATTATCGCGTCTACAGGGGTCTATTGAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS CAA 90 bp | AGCGGACCCTCCCAGCGCTCCAGAAGTCCGGACAGGTGTAGTAGGTaGTCCACACTGGCATGCGTAGCTAAGATGACATCGTTGGGGTCC | + |
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Preference number: 6 (lower is better) Translates to: SGPSQRSRSPDRCSR*STLACVAKMTSLGS Trigger: GGACCCCAACGATGTCATCTTAGCTACGCATGCCAGTGTGGACAACCTACTACACCTGTCCGGACTTCTGGAGCGCTGGGAGGGTCCGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS CCA 72 bp | GTCAAATGTGGGCACCTTTCCTCCAGCCACATAAAATaGTTCCCAGGGGTCCCTCCAGGGCACCACGTAGGC | + |
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Preference number: 6 (lower is better) Translates to: VKCGHLSSSHIK*FPGVPPGHHVG Trigger: GCCTACGTGGTGCCCTGGAGGGACCCCTGGGAACCATTTTATGTGGCTGGAGGAAAGGTGCCCACATTTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS GCA 72 bp | ACCGGCGGATTTCAAATGCAGGCACCACCAGGGCTGTaGCATCCCAGTGATTGCTCTGATCCAACATTTCCC | + |
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Preference number: 6 (lower is better) Translates to: TGGFQMQAPPGL*HPSDCSDPTFP Trigger: GGGAAATGTTGGATCAGAGCAATCACTGGGATGGCACAGCCCTGGTGGTGCCTGCATTTGAAATCCGCCGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS CAA 72 bp | TCCCAGCGCTCCAGAAGTCCGGACAGGTGTAGTAGGTaGTCCACACTGGCATGCGTAGCTAAGATGACATCG | + |
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Preference number: 6 (lower is better) Translates to: SQRSRSPDRCSR*STLACVAKMTS Trigger: CGATGTCATCTTAGCTACGCATGCCAGTGTGGACAACCTACTACACCTGTCCGGACTTCTGGAGCGCTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS GCA 72 bp | AGTCCGGACAGGTGTAGTAGGTTGTCCACACTGGCATaGGTAGCTAAGATGACATCGTTGGGGTCCATGGTG | + |
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Preference number: 6 (lower is better) Translates to: SPDRCSRLSTLA*VAKMTSLGSMV Trigger: CACCATGGACCCCAACGATGTCATCTTAGCTACGCATGCCAGTGTGGACAACCTACTACACCTGTCCGGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS CCA 72 bp | TGGGCACCATGTCCACATCAATCACCAGGGCGTAGTTaGCCTCTTCCCGAGCCAGATTCCTTAACAGGTTAT | + |
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Preference number: 6 (lower is better) Translates to: WAPCPHQSPGRS*PLPEPDSLTGY Trigger: ATAACCTGTTAAGGAATCTGGCTCGGGAAGAGGCCAACTACGCCCTGGTGATTGATGTGGACATGGTGCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053705.8 ENSMUST00000235776.2 |
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| CDS GCA 72 bp | AGCTCACAAGCCTGGCTGATTCGATTGAAACCATACTaGCGAAAGCGTTCGTCAAATGTGGGCACCTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: SSQAWLIRLKPY*RKRSSNVGTFP Trigger: AGGAAAGGTGCCCACATTTGACGAACGCTTTCGGCAGTATGGTTTCAATCGAATCAGCCAGGCTTGTGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053705.8 |
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| CDS GCA 72 bp | CCTTCGTTCAGCACCTCAAAATTAAACCCTGCCACGTaGAGCTCACAAGCCTGGCTGATTCGATTGAAACCA | + |
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Preference number: 6 (lower is better) Translates to: PSFSTSKLNPAT*SSQAWLIRLKP Trigger: TGGTTTCAATCGAATCAGCCAGGCTTGTGAGCTGCACGTGGCAGGGTTTAATTTTGAGGTGCTGAACGAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053705.8 |
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| CDS CAA 90 bp | AAATTAAACCCTGCCACGTGCAGCTCACAAGCCTGGCTGATTCGATaGAAACCATACTGCCGAAAGCGTTCGTCAAATGTGGGCACCTTT | + |
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Preference number: 6 (lower is better) Translates to: KLNPATCSSQAWLIR*KPYCRKRSSNVGTF Trigger: AAAGGTGCCCACATTTGACGAACGCTTTCGGCAGTATGGTTTCAATCGAATCAGCCAGGCTTGTGAGCTGCACGTGGCAGGGTTTAATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053705.8 |
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| CDS CCA 72 bp | TCAAAATTAAACCCTGCCACGTGCAGCTCACAAGCCTaGCTGATTCGATTGAAACCATACTGCCGAAAGCGT | + |
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Preference number: 6 (lower is better) Translates to: SKLNPATCSSQA*LIRLKPYCRKR Trigger: ACGCTTTCGGCAGTATGGTTTCAATCGAATCAGCCAGGCTTGTGAGCTGCACGTGGCAGGGTTTAATTTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053705.8 |
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| CDS CAA 90 bp | TTAGTCCTACATGCCCTCTCCCTTTTAAGTACCTGGCTGATTCGATaGAAACCATACTGCCGAAAGCGTTCGTCAAATGTGGGCACCTTT | + |
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Preference number: 6 (lower is better) Translates to: LVLHALSLLSTWLIR*KPYCRKRSSNVGTF Trigger: AAAGGTGCCCACATTTGACGAACGCTTTCGGCAGTATGGTTTCAATCGAATCAGCCAGGTACTTAAAAGGGAGAGGGCATGTAGGACTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235776.2 |
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| CDS CCA 72 bp | GTCTTAGTCCTACATGCCCTCTCCCTTTTAAGTACCTaGCTGATTCGATTGAAACCATACTGCCGAAAGCGT | + |
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Preference number: 6 (lower is better) Translates to: VLVLHALSLLST*LIRLKPYCRKR Trigger: ACGCTTTCGGCAGTATGGTTTCAATCGAATCAGCCAGGTACTTAAAAGGGAGAGGGCATGTAGGACTAAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235776.2 |
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| CDS CAA 72 bp | CATGCCCTCTCCCTTTTAAGTACCTGGCTGATTCGATaGAAACCATACTGCCGAAAGCGTTCGTCAAATGTG | + |
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Preference number: 6 (lower is better) Translates to: HALSLLSTWLIR*KPYCRKRSSNV Trigger: CACATTTGACGAACGCTTTCGGCAGTATGGTTTCAATCGAATCAGCCAGGTACTTAAAAGGGAGAGGGCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235776.2 |
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| CDS GCA 72 bp | CTTTTAAGTACCTGGCTGATTCGATTGAAACCATACTaGCGAAAGCGTTCGTCAAATGTGGGCACCTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: LLSTWLIRLKPY*RKRSSNVGTFP Trigger: AGGAAAGGTGCCCACATTTGACGAACGCTTTCGGCAGTATGGTTTCAATCGAATCAGCCAGGTACTTAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235776.2 |
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