Pregenerated sensors for B4GALT7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021504Ensembl transcript IDs: ENSMUST00000064701.8, ENSMUST00000100764.10, ENSMUST00000133176.8
Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTTCCAGAGGAGCAGCGGAGCAGTATGTCCCTGCTGAGGCCGTCCTaGCCACCTTCTCACTGCCTCAGGCCTCAGCACACACAGCAGGGC | + |
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Preference number: 1 (lower is better) Translates to: LPEEQRSSMSLLRPS*PPSHCLRPQHTQQG Trigger: GCCCTGCTGTGTGTGCTGAGGCCTGAGGCAGTGAGAAGGTGGCCAGGACGGCCTCAGCAGGGACATACTGCTCCGCTGCTCCTCTGGAAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
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| 3UTR TCA 90 bp | TCTACCTGTGTTCTGTCTTGGGCCTGGCTCTGGGGGCCAGGTTGCTaGAGACGCCGATGGGCTGGCAACTCCTTCAGGCCTCTCTGCATC | + |
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Preference number: 1 (lower is better) Translates to: STCVLSWAWLWGPGC*RRRWAGNSFRPLCI Trigger: GATGCAGAGAGGCCTGAAGGAGTTGCCAGCCCATCGGCGTCTTCAGCAACCTGGCCCCCAGAGCCAGGCCCAAGACAGAACACAGGTAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
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| 3UTR TCA 90 bp | ATCCCAGCAACCACATGGTGGCTCACAACCATCTGCAATGAGATCTaGTGCCCTCTTCTGGTGTGTCTGAAGACAGCTACAGCGTACTCA | + |
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Preference number: 1 (lower is better) Translates to: IPATTWWLTTICNEI*CPLLVCLKTATAYS Trigger: TGAGTACGCTGTAGCTGTCTTCAGACACACCAGAAGAGGGCATCAGATCTCATTGCAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
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| 3UTR TCA 90 bp | AGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGCAATaGGATCTGATGCCCTCTTCTGGTGTGTCTGAAGACAGCTACAGC | + |
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Preference number: 1 (lower is better) Translates to: SSNPSNHMVAHNHLQ*DLMPSSGVSEDSYS Trigger: GCTGTAGCTGTCTTCAGACACACCAGAAGAGGGCATCAGATCTCATTGCAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
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| 3UTR-3UTR TCA 90 bp | GGCTCTGGGGGCCAGGTTGCTGAAGACGCCGATGGGCTGGCAACTCCTTCAGGCGCTGGGCCAAAGGCCTaGGGTTTCCTGAGCCTGAGC | + |
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Preference number: 2 (lower is better) Translates to: GSGGQVAEDADGLATPSGAGPKA*GFLSLS Trigger: GCTCAGGCTCAGGAAACCTCAGGCCTTTGGCCCAGC...GCCTGAAGGAGTTGCCAGCCCATCGGCGTCTTCAGCAACCTGGCCCCCAGAGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
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| 3UTR-3UTR CCA 90 bp | GCATTCAGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTCTTCCAGTTCTGTCTTGGGCCTaGCTCTGGGGGCCAGGTTGC | + |
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Preference number: 2 (lower is better) Translates to: AFRAGEMAQRLRALTALPVLSWA*LWGPGC Trigger: GCAACCTGGCCCCCAGAGCCAGGCCCAAGACAGAAC...TGGAAGAGCAGTCAGTGCTCTTAACCGCTGAGCCATCTCTCCAGCCCTGAATGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
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| 3UTR-3UTR GCA 90 bp | CTTTGTGAGTCTGTTCTTCCAGAGGAGCAGCGGAGCAGTATGTCCCTGCTGAGGTCCTTCAGGCCTCTCTaGATCCTCCTGAGCTGGGCC | + |
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Preference number: 2 (lower is better) Translates to: LCESVLPEEQRSSMSLLRSFRPL*ILLSWA Trigger: GGCCCAGCTCAGGAGGATGCAGAGAGGCCTGAAGGA...CCTCAGCAGGGACATACTGCTCCGCTGCTCCTCTGGAAGAACAGACTCACAAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
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| 3UTR-3UTR CCA 90 bp | CTTTGTGAGTCTGTTCTTCCAGAGGAGCAGCGGAGCAGTATGTCCCTGCTGAGGTGCATCCTCCTGAGCTaGGCCAAAGGCCTGAGGTTT | + |
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Preference number: 2 (lower is better) Translates to: LCESVLPEEQRSSMSLLRCILLS*AKGLRF Trigger: AAACCTCAGGCCTTTGGCCCAGCTCAGGAGGATGCA...CCTCAGCAGGGACATACTGCTCCGCTGCTCCTCTGGAAGAACAGACTCACAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
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| 3UTR-3UTR TCA 90 bp | GCTGTACACACTGGTCACATGACTTCTGACTACATCTTTGTGAGTCTGTTCTTCGCTGGGCCAAAGGCCTaGGGTTTCCTGAGCCTGAGC | + |
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Preference number: 2 (lower is better) Translates to: AVHTGHMTSDYIFVSLFFAGPKA*GFLSLS Trigger: GCTCAGGCTCAGGAAACCTCAGGCCTTTGGCCCAGC...GAAGAACAGACTCACAAAGATGTAGTCAGAAGTCATGTGACCAGTGTGTACAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
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| 3UTR-3UTR TCA 90 bp | GCATTCAGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTCTTCCATTGTGTTCTGCCTTCTaGTGTCCTAAGCCTCCTAGT | + |
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Preference number: 2 (lower is better) Translates to: AFRAGEMAQRLRALTALPLCSAF*CPKPPS Trigger: ACTAGGAGGCTTAGGACATCAGAAGGCAGAACACAA...TGGAAGAGCAGTCAGTGCTCTTAACCGCTGAGCCATCTCTCCAGCCCTGAATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
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| 3UTR-3UTR GCA 90 bp | CACATGACTTCTGACTACATCTTTGTGAGTCTGTTCTTCCAGAGGAGCAGCGGATGGCCACCTTCTCACTaGCTCAGGCCTCAGCACACA | + |
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Preference number: 2 (lower is better) Translates to: HMTSDYIFVSLFFQRSSGWPPSH*LRPQHT Trigger: TGTGTGCTGAGGCCTGAGGCAGTGAGAAGGTGGCCA...TCCGCTGCTCCTCTGGAAGAACAGACTCACAAAGATGTAGTCAGAAGTCATGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
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| 3UTR-3UTR TCA 90 bp | GCATTCAGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTCTTCCACTGACTACATCTTTGTaGGTCTGTTCTTCCAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: AFRAGEMAQRLRALTALPLTTSL*VCSSRG Trigger: TCCTCTGGAAGAACAGACTCACAAAGATGTAGTCAG...TGGAAGAGCAGTCAGTGCTCTTAACCGCTGAGCCATCTCTCCAGCCCTGAATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
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| 3UTR-3UTR CCA 90 bp | CTTTGTGAGTCTGTTCTTCCAGAGGAGCAGCGGAGCAGTATGTCCCTGCTGAGGAGCAGCACTGAGGTCTaGAAGCTTCCTTACAGTTTA | + |
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Preference number: 2 (lower is better) Translates to: LCESVLPEEQRSSMSLLRSSTEV*KLPYSL Trigger: TAAACTGTAAGGAAGCTTCCAGACCTCAGTGCTGCT...CCTCAGCAGGGACATACTGCTCCGCTGCTCCTCTGGAAGAACAGACTCACAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
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| 3UTR-3UTR TCA 90 bp | CATATTTTGTTTGGCCTGCCACAGATTTTCAAAGCTTTAGTTAACTGCTGCCATGCAGTATGTCCCTGCTaGGGCCGTCCTGGCCACCTT | + |
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Preference number: 2 (lower is better) Translates to: HILFGLPQIFKALVNCCHAVCPC*GRPGHL Trigger: AAGGTGGCCAGGACGGCCTCAGCAGGGACATACTGC...ATGGCAGCAGTTAACTAAAGCTTTGAAAATCTGTGGCAGGCCAAACAAAATATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
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| 3UTR-3UTR CCA 90 bp | CATATTTTGTTTGGCCTGCCACAGATTTTCAAAGCTTTAGTTAACTGCTGCCATACCTGTGTTCTGTCTTaGGCCTGGCTCTGGGGGCCA | + |
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Preference number: 2 (lower is better) Translates to: HILFGLPQIFKALVNCCHTCVLS*AWLWGP Trigger: TGGCCCCCAGAGCCAGGCCCAAGACAGAACACAGGT...ATGGCAGCAGTTAACTAAAGCTTTGAAAATCTGTGGCAGGCCAAACAAAATATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
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| 3UTR-3UTR GCA 90 bp | CATATTTTGTTTGGCCTGCCACAGATTTTCAAAGCTTTAGTTAACTGCTGCCATTGGCCACCTTCTCACTaGCTCAGGCCTCAGCACACA | + |
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Preference number: 2 (lower is better) Translates to: HILFGLPQIFKALVNCCHWPPSH*LRPQHT Trigger: TGTGTGCTGAGGCCTGAGGCAGTGAGAAGGTGGCCA...ATGGCAGCAGTTAACTAAAGCTTTGAAAATCTGTGGCAGGCCAAACAAAATATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
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| 3UTR-3UTR CCA 90 bp | TTGTTTGGCCTGCCACAGATTTTCAAAGCTTTAGTTAACTGCTGCCATTTAAAAACCTGTGTTCTGTCTTaGGCCTGGCTCTGGGGGCCA | + |
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Preference number: 2 (lower is better) Translates to: LFGLPQIFKALVNCCHLKTCVLS*AWLWGP Trigger: TGGCCCCCAGAGCCAGGCCCAAGACAGAACACAGGT...TTTTAAATGGCAGCAGTTAACTAAAGCTTTGAAAATCTGTGGCAGGCCAAACAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
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| 3UTR-3UTR CCA 90 bp | CATATTTTGTTTGGCCTGCCACAGATTTTCAAAGCTTTAGTTAACTGCTGCCATTGCATCCTCCTGAGCTaGGCCAAAGGCCTGAGGTTT | + |
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Preference number: 2 (lower is better) Translates to: HILFGLPQIFKALVNCCHCILLS*AKGLRF Trigger: AAACCTCAGGCCTTTGGCCCAGCTCAGGAGGATGCA...ATGGCAGCAGTTAACTAAAGCTTTGAAAATCTGTGGCAGGCCAAACAAAATATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
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| 3UTR-3UTR CCA 90 bp | TTGTTTGGCCTGCCACAGATTTTCAAAGCTTTAGTTAACTGCTGCCATTTAAAACCAGCAACCACATGGTaGCTCACAACCATCTGCAAT | + |
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Preference number: 2 (lower is better) Translates to: LFGLPQIFKALVNCCHLKPATTW*LTTICN Trigger: ATTGCAGATGGTTGTGAGCCACCATGTGGTTGCTGG...TTTTAAATGGCAGCAGTTAACTAAAGCTTTGAAAATCTGTGGCAGGCCAAACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
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| 3UTR-3UTR TCA 90 bp | TTGTTTGGCCTGCCACAGATTTTCAAAGCTTTAGTTAACTGCTGCCATTTAAAACTGACTACATCTTTGTaGGTCTGTTCTTCCAGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: LFGLPQIFKALVNCCHLKLTTSL*VCSSRG Trigger: TCCTCTGGAAGAACAGACTCACAAAGATGTAGTCAG...TTTTAAATGGCAGCAGTTAACTAAAGCTTTGAAAATCTGTGGCAGGCCAAACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
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| 3UTR-3UTR CCA 90 bp | TTGTTTGGCCTGCCACAGATTTTCAAAGCTTTAGTTAACTGCTGCCATTTAAAAAGCAGCACTGAGGTCTaGAAGCTTCCTTACAGTTTA | + |
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Preference number: 2 (lower is better) Translates to: LFGLPQIFKALVNCCHLKSSTEV*KLPYSL Trigger: TAAACTGTAAGGAAGCTTCCAGACCTCAGTGCTGCT...TTTTAAATGGCAGCAGTTAACTAAAGCTTTGAAAATCTGTGGCAGGCCAAACAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
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| 3UTR TCA 72 bp | GTTCTGTCTTGGGCCTGGCTCTGGGGGCCAGGTTGCTaGAGACGCCGATGGGCTGGCAACTCCTTCAGGCCT | + |
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Preference number: 3 (lower is better) Translates to: VLSWAWLWGPGC*RRRWAGNSFRP Trigger: AGGCCTGAAGGAGTTGCCAGCCCATCGGCGTCTTCAGCAACCTGGCCCCCAGAGCCAGGCCCAAGACAGAAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
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| 3UTR CCA 72 bp | GAGCAGCGGAGCAGTATGTCCCTGCTGAGGCCGTCCTaGCCACCTTCTCACTGCCTCAGGCCTCAGCACACA | + |
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Preference number: 3 (lower is better) Translates to: EQRSSMSLLRPS*PPSHCLRPQHT Trigger: TGTGTGCTGAGGCCTGAGGCAGTGAGAAGGTGGCCAGGACGGCCTCAGCAGGGACATACTGCTCCGCTGCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
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| 3UTR TCA 72 bp | TTCTTCCAGAGGAGCAGCGGAGCAGTATGTCCCTGCTaGGGCCGTCCTGGCCACCTTCTCACTGCCTCAGGC | + |
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Preference number: 3 (lower is better) Translates to: FFQRSSGAVCPC*GRPGHLLTASG Trigger: GCCTGAGGCAGTGAGAAGGTGGCCAGGACGGCCTCAGCAGGGACATACTGCTCCGCTGCTCCTCTGGAAGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
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| 3UTR GCA 72 bp | AGACGCCGATGGGCTGGCAACTCCTTCAGGCCTCTCTaGATCCTCCTGAGCTGGGCCAAAGGCCTGAGGTTT | + |
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Preference number: 3 (lower is better) Translates to: RRRWAGNSFRPL*ILLSWAKGLRF Trigger: AAACCTCAGGCCTTTGGCCCAGCTCAGGAGGATGCAGAGAGGCCTGAAGGAGTTGCCAGCCCATCGGCGTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
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| 3UTR-3UTR CAA 90 bp | GCATTCAGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTCTTCCATACCTGTGTTCTGTCTaGGGCCTGGCTCTGGGGGCC | + |
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Preference number: 3 (lower is better) Translates to: AFRAGEMAQRLRALTALPYLCSV*GLALGA Trigger: GGCCCCCAGAGCCAGGCCCAAGACAGAACACAGGTA...TGGAAGAGCAGTCAGTGCTCTTAACCGCTGAGCCATCTCTCCAGCCCTGAATGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
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| 3UTR GCA 72 bp | GGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTaGTCTTCCAAGGGTCCCGAGTTCAAATCCCAGCAA | + |
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Preference number: 3 (lower is better) Translates to: GWRDGSAVKSTD*SSKGPEFKSQQ Trigger: TTGCTGGGATTTGAACTCGGGACCCTTGGAAGAGCAGTCAGTGCTCTTAACCGCTGAGCCATCTCTCCAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
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| 3UTR TCA 72 bp | CCCAGCAACCACATGGTGGCTCACAACCATCTGCAATaGGATCTGATGCCCTCTTCTGGTGTGTCTGAAGAC | + |
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Preference number: 3 (lower is better) Translates to: PSNHMVAHNHLQ*DLMPSSGVSED Trigger: GTCTTCAGACACACCAGAAGAGGGCATCAGATCTCATTGCAGATGGTTGTGAGCCACCATGTGGTTGCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
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| 3UTR CCA 72 bp | AGATCTTGTGCCCTGGTTCCTCCGGTTTTGCTGTGGTaGCACCAATTACAGCTATATCAGCCGCTCCTTCAC | + |
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Preference number: 3 (lower is better) Translates to: RSCALVPPVLLW*HQLQLYQPLLH Trigger: GTGAAGGAGCGGCTGATATAGCTGTAATTGGTGCCACCACAGCAAAACCGGAGGAACCAGGGCACAAGATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
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| 3UTR-3UTR CAA 90 bp | CATATTTTGTTTGGCCTGCCACAGATTTTCAAAGCTTTAGTTAACTGCTGCCATTACCTGTGTTCTGTCTaGGGCCTGGCTCTGGGGGCC | + |
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Preference number: 3 (lower is better) Translates to: HILFGLPQIFKALVNCCHYLCSV*GLALGA Trigger: GGCCCCCAGAGCCAGGCCCAAGACAGAACACAGGTA...ATGGCAGCAGTTAACTAAAGCTTTGAAAATCTGTGGCAGGCCAAACAAAATATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
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| 3UTR TCA 72 bp | AGTAGCAGCGGCTGTACACACTGGTCACATGACTTCTaGCTACATCTTTGTGAGTCTGTTCTTCCAGAGGAG | + |
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Preference number: 3 (lower is better) Translates to: SSSGCTHWSHDF*LHLCESVLPEE Trigger: CTCCTCTGGAAGAACAGACTCACAAAGATGTAGTCAGAAGTCATGTGACCAGTGTGTACAGCCGCTGCTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
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| CDS-3UTR CCA 90 bp | GGCTCTGGGGGCCAGGTTGCTGAAGACGCCGATGGGCTGGCAACTCCTTCAGGCCTCAGGGGGCGGCTCTaGAGGGCAAGCCCGGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: GSGGQVAEDADGLATPSGLRGRL*RASPGW Trigger: CCACCCCGGGCTTGCCCTCCAGAGCCGCCCCCTGAG...GCCTGAAGGAGTTGCCAGCCCATCGGCGTCTTCAGCAACCTGGCCCCCAGAGCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
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| CDS-3UTR GCA 90 bp | GGCTCTGGGGGCCAGGTTGCTGAAGACGCCGATGGGCTGGCAACTCCTTCAGGCCCAGAACAGCTGAGCTaGAGCCAGAGCAGGGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: GSGGQVAEDADGLATPSGPEQLS*SQSREK Trigger: CTTCTCCCTGCTCTGGCTGCAGCTCAGCTGTTCTGG...GCCTGAAGGAGTTGCCAGCCCATCGGCGTCTTCAGCAACCTGGCCCCCAGAGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
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| CDS-3UTR CCA 90 bp | CCAGCATTCAGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTCTTCTCAGGGGGCGGCTCTaGAGGGCAAGCCCGGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: PAFRAGEMAQRLRALTALLRGRL*RASPGW Trigger: CCACCCCGGGCTTGCCCTCCAGAGCCGCCCCCTGAG...AAGAGCAGTCAGTGCTCTTAACCGCTGAGCCATCTCTCCAGCCCTGAATGCTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
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| CDS-3UTR GCA 90 bp | GGCTCTGGGGGCCAGGTTGCTGAAGACGCCGATGGGCTGGCAACTCCTTCAGGCAGTCTGTGCTGTTGCTaGTCTCCAGGAAGCCCACAT | + |
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Preference number: 4 (lower is better) Translates to: GSGGQVAEDADGLATPSGSLCCC*SPGSPH Trigger: ATGTGGGCTTCCTGGAGAGCAGCAACAGCACAGACT...GCCTGAAGGAGTTGCCAGCCCATCGGCGTCTTCAGCAACCTGGCCCCCAGAGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
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| CDS-3UTR GCA 90 bp | GGCTCTGGGGGCCAGGTTGCTGAAGACGCCGATGGGCTGGCAACTCCTTCAGGCTGGACAGCAGCAGAATaGCGCCCACATAGGTCTTGT | + |
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Preference number: 4 (lower is better) Translates to: GSGGQVAEDADGLATPSGWTAAE*RPHRSC Trigger: ACAAGACCTATGTGGGCGGCATTCTGCTGCTGTCCA...GCCTGAAGGAGTTGCCAGCCCATCGGCGTCTTCAGCAACCTGGCCCCCAGAGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
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| CDS-3UTR TCA 90 bp | GCAGCGGAGCAGTATGTCCCTGCTGAGGCCGTCCTGGCCACCTTCTCACTGCCTAATGGTCCACCTGGTTaGGCACATAGATGTGGTGCT | + |
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Preference number: 4 (lower is better) Translates to: AAEQYVPAEAVLATFSLPNGPPG*AHRCGA Trigger: AGCACCACATCTATGTGCTCAACCAGGTGGACCATT...AGGCAGTGAGAAGGTGGCCAGGACGGCCTCAGCAGGGACATACTGCTCCGCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
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| CDS-3UTR GCA 90 bp | GGCTCTGGGGGCCAGGTTGCTGAAGACGCCGATGGGCTGGCAACTCCTTCAGGCGTTTTTGAGCCGCAATaGGTTTTTGGTCCCTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: GSGGQVAEDADGLATPSGVFEPQ*VFGPSS Trigger: GGAAGAGGGACCAAAAACGCATTGCGGCTCAAAAAC...GCCTGAAGGAGTTGCCAGCCCATCGGCGTCTTCAGCAACCTGGCCCCCAGAGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000064701.8 |
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| CDS-3UTR CCA 90 bp | CTTTGTGAGTCTGTTCTTCCAGAGGAGCAGCGGAGCAGTATGTCCCTGCTGAGGCTCCAGGAAGCAACCTaGCCCTGCCATCCTCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LCESVLPEEQRSSMSLLRLQEAT*PCHPPR Trigger: CCTGGGAGGATGGCAGGGCCAGGTTGCTTCCTGGAG...CCTCAGCAGGGACATACTGCTCCGCTGCTCCTCTGGAAGAACAGACTCACAAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
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| CDS-3UTR CCA 90 bp | CCAGCATTCAGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTCTTCTCCAGGAAGCAACCTaGCCCTGCCATCCTCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: PAFRAGEMAQRLRALTALLQEAT*PCHPPR Trigger: CCTGGGAGGATGGCAGGGCCAGGTTGCTTCCTGGAG...AAGAGCAGTCAGTGCTCTTAACCGCTGAGCCATCTCTCCAGCCCTGAATGCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
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| CDS-3UTR CCA 90 bp | GCATTCAGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTCTTCCAGAGAGGGTGGAGCTCTaGGGAGGCCACATGGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: AFRAGEMAQRLRALTALPERVEL*GGHMEG Trigger: CCCTTCCATGTGGCCTCCCCAGAGCTCCACCCTCTC...TGGAAGAGCAGTCAGTGCTCTTAACCGCTGAGCCATCTCTCCAGCCCTGAATGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
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| CDS-3UTR CCA 90 bp | TCCCAGCAACCACATGGTGGCTCACAACCATCTGCAATGAGATCTGATGCCCTCGAGAGGGTGGAGCTCTaGGGAGGCCACATGGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: SQQPHGGSQPSAMRSDALERVEL*GGHMEG Trigger: CCCTTCCATGTGGCCTCCCCAGAGCTCCACCCTCTC...GAGGGCATCAGATCTCATTGCAGATGGTTGTGAGCCACCATGTGGTTGCTGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
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| CDS-3UTR GCA 90 bp | CACATGACTTCTGACTACATCTTTGTGAGTCTGTTCTTCCAGAGGAGCAGCGGATCCTCCCAGGGCAGCTaGGCCGCTTTCCTCCGGGAG | + |
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Preference number: 4 (lower is better) Translates to: HMTSDYIFVSLFFQRSSGSSQGS*AAFLRE Trigger: CTCCCGGAGGAAAGCGGCGCAGCTGCCCTGGGAGGA...TCCGCTGCTCCTCTGGAAGAACAGACTCACAAAGATGTAGTCAGAAGTCATGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
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| CDS-3UTR CCA 90 bp | CACATGACTTCTGACTACATCTTTGTGAGTCTGTTCTTCCAGAGGAGCAGCGGAAGGGCAAGCCCGGGGTaGACCCGAGGTCTCTTGCCC | + |
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Preference number: 4 (lower is better) Translates to: HMTSDYIFVSLFFQRSSGRASPG*TRGLLP Trigger: GGGCAAGAGACCTCGGGTCCACCCCGGGCTTGCCCT...TCCGCTGCTCCTCTGGAAGAACAGACTCACAAAGATGTAGTCAGAAGTCATGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
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| CDS-3UTR TCA 90 bp | CCAGCATTCAGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTCTTGGAGGCCAGCTCCTTTaGTGCGCCGGTAGAATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PAFRAGEMAQRLRALTALGGQLL*CAGRIH Trigger: ATGAATTCTACCGGCGCATCAAAGGAGCTGGCCTCC...AAGAGCAGTCAGTGCTCTTAACCGCTGAGCCATCTCTCCAGCCCTGAATGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
||
| CDS-3UTR TCA 90 bp | GCATTCAGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTCTTCCATCTGGTACCCAGTTGTaGTTCCCGAGGGGCGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: AFRAGEMAQRLRALTALPSGTQL*FPRGGK Trigger: TTTTCCGCCCCTCGGGAATCACAACTGGGTACCAGA...TGGAAGAGCAGTCAGTGCTCTTAACCGCTGAGCCATCTCTCCAGCCCTGAATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064701.8 |
||
| CDS-3UTR GCA 90 bp | GCATTCAGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTCTTCCACTGCTTAGGAAGCGGTaGATGTGGGGCACAAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: AFRAGEMAQRLRALTALPLLRKR*MWGTKT Trigger: GGTCTTTGTGCCCCACATGCACCGCTTCCTAAGCAG...TGGAAGAGCAGTCAGTGCTCTTAACCGCTGAGCCATCTCTCCAGCCCTGAATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
||
| CDS-3UTR GCA 90 bp | CTTTGTGAGTCTGTTCTTCCAGAGGAGCAGCGGAGCAGTATGTCCCTGCTGAGGCTGCTTAGGAAGCGGTaGATGTGGGGCACAAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: LCESVLPEEQRSSMSLLRLLRKR*MWGTKT Trigger: GGTCTTTGTGCCCCACATGCACCGCTTCCTAAGCAG...CCTCAGCAGGGACATACTGCTCCGCTGCTCCTCTGGAAGAACAGACTCACAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
||
| CDS-3UTR CCA 90 bp | GCATTCAGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTCTTCCATGTCCCCTGGTCACCTaGGCCATATCTCCAGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: AFRAGEMAQRLRALTALPCPLVT*AISPEQ Trigger: CTGTTCTGGAGATATGGCCCAGGTGACCAGGGGACA...TGGAAGAGCAGTCAGTGCTCTTAACCGCTGAGCCATCTCTCCAGCCCTGAATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
||
| CDS-3UTR TCA 90 bp | CTTTGTGAGTCTGTTCTTCCAGAGGAGCAGCGGAGCAGTATGTCCCTGCTGAGGCCTCCCGGTCCACCTTaGACTGTTCCTGTTTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LCESVLPEEQRSSMSLLRPPGPP*TVPVFE Trigger: CTCAAAAACAGGAACAGTTCAAGGTGGACCGGGAGG...CCTCAGCAGGGACATACTGCTCCGCTGCTCCTCTGGAAGAACAGACTCACAAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064701.8 |
||
| CDS-3UTR GCA 90 bp | CACATGACTTCTGACTACATCTTTGTGAGTCTGTTCTTCCAGAGGAGCAGCGGAGGACCCGAGGTCTCTTaGCCTTGTCCCCTGGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: HMTSDYIFVSLFFQRSSGGPEVS*PCPLVT Trigger: GGTGACCAGGGGACAAGGGCAAGAGACCTCGGGTCC...TCCGCTGCTCCTCTGGAAGAACAGACTCACAAAGATGTAGTCAGAAGTCATGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
||
| CDS-3UTR GCA 90 bp | GCATTCAGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTCTTCCAGCTGGATCCTCTTCCTaGTTAGGAAGCGGTGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: AFRAGEMAQRLRALTALPAGSSS*LGSGAC Trigger: ACATGCACCGCTTCCTAAGCAGGAAGAGGATCCAGC...TGGAAGAGCAGTCAGTGCTCTTAACCGCTGAGCCATCTCTCCAGCCCTGAATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
||
| CDS-3UTR GCA 90 bp | CTTTGTGAGTCTGTTCTTCCAGAGGAGCAGCGGAGCAGTATGTCCCTGCTGAGGGCTGGATCCTCTTCCTaGTTAGGAAGCGGTGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: LCESVLPEEQRSSMSLLRAGSSS*LGSGAC Trigger: ACATGCACCGCTTCCTAAGCAGGAAGAGGATCCAGC...CCTCAGCAGGGACATACTGCTCCGCTGCTCCTCTGGAAGAACAGACTCACAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
||
| CDS-3UTR GCA 90 bp | CCAGCATTCAGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTCTTTGTAGTCTGTGCTGTTaGTGCTCTCCAGGAAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PAFRAGEMAQRLRALTALCSLCC*CSPGSP Trigger: TGGGCTTCCTGGAGAGCAGCAACAGCACAGACTACA...AAGAGCAGTCAGTGCTCTTAACCGCTGAGCCATCTCTCCAGCCCTGAATGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
||
| CDS-3UTR GCA 90 bp | CCAGGAGGAGAAGGTCAGTCAAGAGCCATACCTTCAGCAGCATCCCAGGGTCTATGTAGTCTGTGCTGTTaGTGCTCTCCAGGAAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PGGEGQSRAIPSAASQGLCSLCC*CSPGSP Trigger: TGGGCTTCCTGGAGAGCAGCAACAGCACAGACTACA...TAGACCCTGGGATGCTGCTGAAGGTATGGCTCTTGACTGACCTTCTCCTCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
||
| CDS-3UTR GCA 90 bp | CTTTGTGAGTCTGTTCTTCCAGAGGAGCAGCGGAGCAGTATGTCCCTGCTGAGGTGGCGATGTAGTCTGTaGTGTTGCTGCTCTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LCESVLPEEQRSSMSLLRWRCSL*CCCSPG Trigger: TCCTGGAGAGCAGCAACAGCACAGACTACATCGCCA...CCTCAGCAGGGACATACTGCTCCGCTGCTCCTCTGGAAGAACAGACTCACAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
||
| CDS-3UTR GCA 90 bp | GCATTCAGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTCTTCCATGGACAGCAGCAGAATaGCGCCCACATAGGTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: AFRAGEMAQRLRALTALPWTAAE*RPHRSC Trigger: ACAAGACCTATGTGGGCGGCATTCTGCTGCTGTCCA...TGGAAGAGCAGTCAGTGCTCTTAACCGCTGAGCCATCTCTCCAGCCCTGAATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
||
| CDS-3UTR GCA 90 bp | CACATGACTTCTGACTACATCTTTGTGAGTCTGTTCTTCCAGAGGAGCAGCGGACCCTCCTATAGACAGTaGCGTGCGGGAATCCACCCG | + |
|
Preference number: 4 (lower is better) Translates to: HMTSDYIFVSLFFQRSSGPSYRQ*RAGIHP Trigger: CGGGTGGATTCCCGCACGGCACTGTCTATAGGAGGG...TCCGCTGCTCCTCTGGAAGAACAGACTCACAAAGATGTAGTCAGAAGTCATGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
||
| CDS-3UTR TCA 90 bp | GCATTCAGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTCTTCCAAACTGTTCCTGTTTTTaGGCCGCAATGCGTTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: AFRAGEMAQRLRALTALPNCSCF*AAMRFW Trigger: CCAAAAACGCATTGCGGCTCAAAAACAGGAACAGTT...TGGAAGAGCAGTCAGTGCTCTTAACCGCTGAGCCATCTCTCCAGCCCTGAATGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000064701.8 |
||
| CDS-3UTR GCA 90 bp | CATATTTTGTTTGGCCTGCCACAGATTTTCAAAGCTTTAGTTAACTGCTGCCATTCCTCCCAGGGCAGCTaGGCCGCTTTCCTCCGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HILFGLPQIFKALVNCCHSSQGS*AAFLRE Trigger: CTCCCGGAGGAAAGCGGCGCAGCTGCCCTGGGAGGA...ATGGCAGCAGTTAACTAAAGCTTTGAAAATCTGTGGCAGGCCAAACAAAATATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
||
| CDS-3UTR GCA 90 bp | GCTGTACACACTGGTCACATGACTTCTGACTACATCTTTGTGAGTCTGTTCTTCCCCTCCTATAGACAGTaGCGTGCGGGAATCCACCCG | + |
|
Preference number: 4 (lower is better) Translates to: AVHTGHMTSDYIFVSLFFPSYRQ*RAGIHP Trigger: CGGGTGGATTCCCGCACGGCACTGTCTATAGGAGGG...GAAGAACAGACTCACAAAGATGTAGTCAGAAGTCATGTGACCAGTGTGTACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
||
| CDS-3UTR CCA 90 bp | CACATGACTTCTGACTACATCTTTGTGAGTCTGTTCTTCCAGAGGAGCAGCGGATGTCCCCTGGTCACCTaGGCCATATCTCCAGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: HMTSDYIFVSLFFQRSSGCPLVT*AISPEQ Trigger: CTGTTCTGGAGATATGGCCCAGGTGACCAGGGGACA...TCCGCTGCTCCTCTGGAAGAACAGACTCACAAAGATGTAGTCAGAAGTCATGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
||
| CDS-3UTR GCA 90 bp | CACATGACTTCTGACTACATCTTTGTGAGTCTGTTCTTCCAGAGGAGCAGCGGATGGCGATGTAGTCTGTaGTGTTGCTGCTCTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: HMTSDYIFVSLFFQRSSGWRCSL*CCCSPG Trigger: TCCTGGAGAGCAGCAACAGCACAGACTACATCGCCA...TCCGCTGCTCCTCTGGAAGAACAGACTCACAAAGATGTAGTCAGAAGTCATGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
||
| CDS-3UTR CCA 90 bp | CACATGACTTCTGACTACATCTTTGTGAGTCTGTTCTTCCAGAGGAGCAGCGGAGCAGGGTCATGCAAGTaGCGAAATGTCTGGTACCCA | + |
|
Preference number: 4 (lower is better) Translates to: HMTSDYIFVSLFFQRSSGAGSCK*RNVWYP Trigger: TGGGTACCAGACATTTCGCCACTTGCATGACCCTGC...TCCGCTGCTCCTCTGGAAGAACAGACTCACAAAGATGTAGTCAGAAGTCATGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064701.8 |
||
| CDS-3UTR GCA 90 bp | GCTGTACACACTGGTCACATGACTTCTGACTACATCTTTGTGAGTCTGTTCTTCAGTCTGTGCTGTTGCTaGTCTCCAGGAAGCCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: AVHTGHMTSDYIFVSLFFSLCCC*SPGSPH Trigger: ATGTGGGCTTCCTGGAGAGCAGCAACAGCACAGACT...GAAGAACAGACTCACAAAGATGTAGTCAGAAGTCATGTGACCAGTGTGTACAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
||
| CDS-3UTR GCA 90 bp | TTGTTTGGCCTGCCACAGATTTTCAAAGCTTTAGTTAACTGCTGCCATTTAAAACCAGAACAGCTGAGCTaGAGCCAGAGCAGGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LFGLPQIFKALVNCCHLKPEQLS*SQSREK Trigger: CTTCTCCCTGCTCTGGCTGCAGCTCAGCTGTTCTGG...TTTTAAATGGCAGCAGTTAACTAAAGCTTTGAAAATCTGTGGCAGGCCAAACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
||
| CDS-3UTR GCA 90 bp | TTGTTTGGCCTGCCACAGATTTTCAAAGCTTTAGTTAACTGCTGCCATTTAAAACGCCAGGCAGGGTCATaGAAGTGGCGAAATGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LFGLPQIFKALVNCCHLKRQAGS*KWRNVW Trigger: CCAGACATTTCGCCACTTGCATGACCCTGCCTGGCG...TTTTAAATGGCAGCAGTTAACTAAAGCTTTGAAAATCTGTGGCAGGCCAAACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064701.8 |
||
| CDS-3UTR CCA 90 bp | TTGTTTGGCCTGCCACAGATTTTCAAAGCTTTAGTTAACTGCTGCCATTTAAAAGCCGCAATGCGTTTTTaGTCCCTCTTCCGCCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LFGLPQIFKALVNCCHLKAAMRF*SLFRQA Trigger: TGCCTGGCGGAAGAGGGACCAAAAACGCATTGCGGC...TTTTAAATGGCAGCAGTTAACTAAAGCTTTGAAAATCTGTGGCAGGCCAAACAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000064701.8 |
||
| CDS-3UTR TCA 90 bp | TTGTTTGGCCTGCCACAGATTTTCAAAGCTTTAGTTAACTGCTGCCATTTAAAAGGAGGCCAGCTCCTTTaGTGCGCCGGTAGAATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LFGLPQIFKALVNCCHLKGGQLL*CAGRIH Trigger: ATGAATTCTACCGGCGCATCAAAGGAGCTGGCCTCC...TTTTAAATGGCAGCAGTTAACTAAAGCTTTGAAAATCTGTGGCAGGCCAAACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
||
| CDS-3UTR TCA 90 bp | TTGTTTGGCCTGCCACAGATTTTCAAAGCTTTAGTTAACTGCTGCCATTTAAAAAATGGTCCACCTGGTTaGGCACATAGATGTGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LFGLPQIFKALVNCCHLKNGPPG*AHRCGA Trigger: AGCACCACATCTATGTGCTCAACCAGGTGGACCATT...TTTTAAATGGCAGCAGTTAACTAAAGCTTTGAAAATCTGTGGCAGGCCAAACAA 42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
||
| CDS-3UTR CCA 90 bp | CATATTTTGTTTGGCCTGCCACAGATTTTCAAAGCTTTAGTTAACTGCTGCCATAAGTGGCGAAATGTCTaGTACCCAGTTGTGATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: HILFGLPQIFKALVNCCHKWRNV*YPVVIP Trigger: GGGAATCACAACTGGGTACCAGACATTTCGCCACTT...ATGGCAGCAGTTAACTAAAGCTTTGAAAATCTGTGGCAGGCCAAACAAAATATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064701.8 |
||
| CDS-3UTR CCA 90 bp | TTGTTTGGCCTGCCACAGATTTTCAAAGCTTTAGTTAACTGCTGCCATTTAAAAACCTTGAACTGTTCCTaGAGGCCAGCTCCTTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: LFGLPQIFKALVNCCHLKTLNCS*RPAPLM Trigger: CATCAAAGGAGCTGGCCTCCAGGAACAGTTCAAGGT...TTTTAAATGGCAGCAGTTAACTAAAGCTTTGAAAATCTGTGGCAGGCCAAACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100764.10 |
||
| CDS CCA 90 bp | GCCCGGGGTGGACCCGAGGTCTCTTGCCCTTGTCCCCTGGTCACCTaGGCCATATCTCCAGAACAGCTGAGCTGCAGCCAGAGCAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ARGGPEVSCPCPLVT*AISPEQLSCSQSRE Trigger: CTCCCTGCTCTGGCTGCAGCTCAGCTGTTCTGGAGATATGGCCCAGGTGACCAGGGGACAAGGGCAAGAGACCTCGGGTCCACCCCGGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
||
| CDS CCA 90 bp | AGCTCCTCAAAGCGCTCACGAAAGGGCACCAGCACTGCCAAGCGGTaGGGCCCCCAGGACTCATCTTCTTCCCAGTGCTCAGGGGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: SSSKRSRKGTSTAKR*GPQDSSSSQCSGGG Trigger: GCCGCCCCCTGAGCACTGGGAAGAAGATGAGTCCTGGGGGCCCCACCGCTTGGCAGTGCTGGTGCCCTTTCGTGAGCGCTTTGAGGAGCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 ENSMUST00000133176.8 |
||
| CDS-3UTR CAA 90 bp | GGCTCTGGGGGCCAGGTTGCTGAAGACGCCGATGGGCTGGCAACTCCTTCAGGCTGGACCCGAGGTCTCTaGCCCTTGTCCCCTGGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: GSGGQVAEDADGLATPSGWTRGL*PLSPGH Trigger: GTGACCAGGGGACAAGGGCAAGAGACCTCGGGTCCA...GCCTGAAGGAGTTGCCAGCCCATCGGCGTCTTCAGCAACCTGGCCCCCAGAGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
||
| CDS-3UTR CAA 90 bp | GCAGCGGAGCAGTATGTCCCTGCTGAGGCCGTCCTGGCCACCTTCTCACTGCCTCAGTCCAGCATGACATaGAGGACAGTGCACGGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: AAEQYVPAEAVLATFSLPQSSMT*RTVHGA Trigger: GGCCCCGTGCACTGTCCTCAATGTCATGCTGGACTG...AGGCAGTGAGAAGGTGGCCAGGACGGCCTCAGCAGGGACATACTGCTCCGCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
||
| CDS CCA 90 bp | AATGCCGCCCACATAGGTCTTGTAGTGGTAGAGAGGGTGGAGCTCTaGGGAGGCCACATGGAAGGGCCCAGCCTCCGGGAAGCCATAGTC | + |
|
Preference number: 5 (lower is better) Translates to: NAAHIGLVVVERVEL*GGHMEGPSLREAIV Trigger: GACTATGGCTTCCCGGAGGCTGGGCCCTTCCATGTGGCCTCCCCAGAGCTCCACCCTCTCTACCACTACAAGACCTATGTGGGCGGCATT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 ENSMUST00000133176.8 |
||
| CDS GCA 90 bp | CAGCATGACATTGAGGACAGTGCACGGGGCCCCTCCTATAGACAGTaGCGTGCGGGAATCCACCCGGTACTTCACAGTGTTCAGGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QHDIEDSARGPSYRQ*RAGIHPVLHSVQAS Trigger: GGAGGCCTGAACACTGTGAAGTACCGGGTGGATTCCCGCACGGCACTGTCTATAGGAGGGGCCCCGTGCACTGTCCTCAATGTCATGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
||
| CDS-3UTR CAA 90 bp | CCAGCATTCAGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTCTTCGAGGTCTCTTGCCCTaGTCCCCTGGTCACCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PAFRAGEMAQRLRALTALRGLLP*SPGHLG Trigger: GCCCAGGTGACCAGGGGACAAGGGCAAGAGACCTCG...AAGAGCAGTCAGTGCTCTTAACCGCTGAGCCATCTCTCCAGCCCTGAATGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
||
| CDS-3UTR CAA 90 bp | CTTTGTGAGTCTGTTCTTCCAGAGGAGCAGCGGAGCAGTATGTCCCTGCTGAGGCGAGGTCTCTTGCCCTaGTCCCCTGGTCACCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LCESVLPEEQRSSMSLLRRGLLP*SPGHLG Trigger: GCCCAGGTGACCAGGGGACAAGGGCAAGAGACCTCG...CCTCAGCAGGGACATACTGCTCCGCTGCTCCTCTGGAAGAACAGACTCACAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
||
| CDS-3UTR CAA 90 bp | GCATTCAGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTCTTCCATGGACCCGAGGTCTCTaGCCCTTGTCCCCTGGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: AFRAGEMAQRLRALTALPWTRGL*PLSPGH Trigger: GTGACCAGGGGACAAGGGCAAGAGACCTCGGGTCCA...TGGAAGAGCAGTCAGTGCTCTTAACCGCTGAGCCATCTCTCCAGCCCTGAATGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
||
| CDS-3UTR CAA 90 bp | CTTTGTGAGTCTGTTCTTCCAGAGGAGCAGCGGAGCAGTATGTCCCTGCTGAGGCAGTCCAGCATGACATaGAGGACAGTGCACGGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LCESVLPEEQRSSMSLLRQSSMT*RTVHGA Trigger: GGCCCCGTGCACTGTCCTCAATGTCATGCTGGACTG...CCTCAGCAGGGACATACTGCTCCGCTGCTCCTCTGGAAGAACAGACTCACAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
||
| CDS CCA 90 bp | GCAATGCGTTTTTGGTCCCTCTTCCGCCAGGCAGGGTCATGCAAGTaGCGAAATGTCTGGTACCCAGTTGTGATTCCCGAGGGGCGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: AMRFWSLFRQAGSCK*RNVWYPVVIPEGRK Trigger: TTTCCGCCCCTCGGGAATCACAACTGGGTACCAGACATTTCGCCACTTGCATGACCCTGCCTGGCGGAAGAGGGACCAAAAACGCATTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000133176.8 |
||
| CDS GCA 90 bp | ACATTCCGTTGCACAGCTGGTAGTGCTGTTTGGACAGCAGCAGAATaGCGCCCACATAGGTCTTGTAGTGGTAGAGAGGGTGGAGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: TFRCTAGSAVWTAAE*RPHRSCSGREGGAL Trigger: CAGAGCTCCACCCTCTCTACCACTACAAGACCTATGTGGGCGGCATTCTGCTGCTGTCCAAACAGCACTACCAGCTGTGCAACGGAATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 ENSMUST00000133176.8 |
||
| CDS-3UTR CAA 90 bp | GCATTCAGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTCTTCCAGAACTGTTCCTGTTTTaGAGCCGCAATGCGTTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: AFRAGEMAQRLRALTALPELFLF*SRNAFL Trigger: CAAAAACGCATTGCGGCTCAAAAACAGGAACAGTTC...TGGAAGAGCAGTCAGTGCTCTTAACCGCTGAGCCATCTCTCCAGCCCTGAATGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064701.8 |
||
| CDS-3UTR CAA 90 bp | CATATTTTGTTTGGCCTGCCACAGATTTTCAAAGCTTTAGTTAACTGCTGCCATAGCCGCAATGCGTTTTaGGTCCCTCTTCCGCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: HILFGLPQIFKALVNCCHSRNAF*VPLPPG Trigger: GCCTGGCGGAAGAGGGACCAAAAACGCATTGCGGCT...ATGGCAGCAGTTAACTAAAGCTTTGAAAATCTGTGGCAGGCCAAACAAAATATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064701.8 |
||
| CDS-3UTR CAA 90 bp | TTGTTTGGCCTGCCACAGATTTTCAAAGCTTTAGTTAACTGCTGCCATTTAAAACCCTCCCGGTCCACCTaGAACTGTTCCTGGAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LFGLPQIFKALVNCCHLKPSRST*NCSWRP Trigger: TGGCCTCCAGGAACAGTTCAAGGTGGACCGGGAGGG...TTTTAAATGGCAGCAGTTAACTAAAGCTTTGAAAATCTGTGGCAGGCCAAACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100764.10 |
||
| CDS-3UTR CAA 90 bp | TTGTTTGGCCTGCCACAGATTTTCAAAGCTTTAGTTAACTGCTGCCATTTAAAATCCAGGAAGCCCACATaGATGAGTGCTGCCCGATTG | + |
|
Preference number: 5 (lower is better) Translates to: LFGLPQIFKALVNCCHLKSRKPT*MSAARL Trigger: CAATCGGGCAGCACTCATCAATGTGGGCTTCCTGGA...TTTTAAATGGCAGCAGTTAACTAAAGCTTTGAAAATCTGTGGCAGGCCAAACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
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| CDS CCA 72 bp | GGACTCATCTTCTTCCCAGTGCTCAGGGGGCGGCTCTaGAGGGCAAGCCCGGGGTGGACCCGAGGTCTCTTG | + |
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Preference number: 6 (lower is better) Translates to: GLIFFPVLRGRL*RASPGWTRGLL Trigger: CAAGAGACCTCGGGTCCACCCCGGGCTTGCCCTCCAGAGCCGCCCCCTGAGCACTGGGAAGAAGATGAGTCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 ENSMUST00000133176.8 |
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| CDS CCA 72 bp | AAGCGCTCACGAAAGGGCACCAGCACTGCCAAGCGGTaGGGCCCCCAGGACTCATCTTCTTCCCAGTGCTCA | + |
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Preference number: 6 (lower is better) Translates to: KRSRKGTSTAKR*GPQDSSSSQCS Trigger: TGAGCACTGGGAAGAAGATGAGTCCTGGGGGCCCCACCGCTTGGCAGTGCTGGTGCCCTTTCGTGAGCGCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 ENSMUST00000133176.8 |
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| CDS CCA 72 bp | CACATAGGTCTTGTAGTGGTAGAGAGGGTGGAGCTCTaGGGAGGCCACATGGAAGGGCCCAGCCTCCGGGAA | + |
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Preference number: 6 (lower is better) Translates to: HIGLVVVERVEL*GGHMEGPSLRE Trigger: TTCCCGGAGGCTGGGCCCTTCCATGTGGCCTCCCCAGAGCTCCACCCTCTCTACCACTACAAGACCTATGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 ENSMUST00000133176.8 |
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| CDS TCA 72 bp | GTCCCCTGGTCACCTGGGCCATATCTCCAGAACAGCTaGGCTGCAGCCAGAGCAGGGAGAAGAAGACCAACA | + |
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Preference number: 6 (lower is better) Translates to: VPWSPGPYLQNS*AAARAGRRRPT Trigger: TGTTGGTCTTCTTCTCCCTGCTCTGGCTGCAGCTCAGCTGTTCTGGAGATATGGCCCAGGTGACCAGGGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
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| CDS GCA 72 bp | ATTGAGGACAGTGCACGGGGCCCCTCCTATAGACAGTaGCGTGCGGGAATCCACCCGGTACTTCACAGTGTT | + |
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Preference number: 6 (lower is better) Translates to: IEDSARGPSYRQ*RAGIHPVLHSV Trigger: AACACTGTGAAGTACCGGGTGGATTCCCGCACGGCACTGTCTATAGGAGGGGCCCCGTGCACTGTCCTCAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 |
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| CDS CAA 72 bp | TACTTCACAGTGTTCAGGCCTCCCTCCCGGTCCACCTaGAACTGTTCCTGGAGGCCAGCTCCTTTGATGCGC | + |
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Preference number: 6 (lower is better) Translates to: YFTVFRPPSRST*NCSWRPAPLMR Trigger: GCGCATCAAAGGAGCTGGCCTCCAGGAACAGTTCAAGGTGGACCGGGAGGGAGGCCTGAACACTGTGAAGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100764.10 |
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| CDS CCA 72 bp | TGCTGGATCCTCTTCCTGCTTAGGAAGCGGTGCATGTaGGGCACAAAGACCAGCAGCTCCTCAAAGCGCTCA | + |
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Preference number: 6 (lower is better) Translates to: CWILFLLRKRCM*GTKTSSSSKRS Trigger: TGAGCGCTTTGAGGAGCTGCTGGTCTTTGTGCCCCACATGCACCGCTTCCTAAGCAGGAAGAGGATCCAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 ENSMUST00000133176.8 |
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| CDS CCA 72 bp | TTTTGGTCCCTCTTCCGCCAGGCAGGGTCATGCAAGTaGCGAAATGTCTGGTACCCAGTTGTGATTCCCGAG | + |
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Preference number: 6 (lower is better) Translates to: FWSLFRQAGSCK*RNVWYPVVIPE Trigger: CTCGGGAATCACAACTGGGTACCAGACATTTCGCCACTTGCATGACCCTGCCTGGCGGAAGAGGGACCAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000133176.8 |
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| CDS CAA 90 bp | CCGGTCCACCTTGAACTGTTCCTGTTTTTGAGCCGCAATGCGTTTTaGGTCCCTCTTCCGCCAGGCAGGGTCATGCAAGTGGCGAAATGT | + |
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Preference number: 6 (lower is better) Translates to: PVHLELFLFLSRNAF*VPLPPGRVMQVAKC Trigger: ACATTTCGCCACTTGCATGACCCTGCCTGGCGGAAGAGGGACCAAAAACGCATTGCGGCTCAAAAACAGGAACAGTTCAAGGTGGACCGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064701.8 |
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| CDS GCA 72 bp | GCTGTTGCTGCTCTCCAGGAAGCCCACATTGATGAGTaGTGCCCGATTGAACCTGAAATGGTCCACCTGGTT | + |
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Preference number: 6 (lower is better) Translates to: AVAALQEAHIDE*CPIEPEMVHLV Trigger: AACCAGGTGGACCATTTCAGGTTCAATCGGGCAGCACTCATCAATGTGGGCTTCCTGGAGAGCAGCAACAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 ENSMUST00000133176.8 |
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| CDS GCA 72 bp | TGCACAGCTGGTAGTGCTGTTTGGACAGCAGCAGAATaGCGCCCACATAGGTCTTGTAGTGGTAGAGAGGGT | + |
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Preference number: 6 (lower is better) Translates to: CTAGSAVWTAAE*RPHRSCSGREG Trigger: ACCCTCTCTACCACTACAAGACCTATGTGGGCGGCATTCTGCTGCTGTCCAAACAGCACTACCAGCTGTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 ENSMUST00000133176.8 |
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| CDS CCA 72 bp | GGTTGGACATTCCGTTGCACAGCTGGTAGTGCTGTTTaGACAGCAGCAGAATGCCGCCCACATAGGTCTTGT | + |
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Preference number: 6 (lower is better) Translates to: GWTFRCTAGSAV*TAAECRPHRSC Trigger: ACAAGACCTATGTGGGCGGCATTCTGCTGCTGTCCAAACAGCACTACCAGCTGTGCAACGGAATGTCCAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064701.8 ENSMUST00000100764.10 ENSMUST00000133176.8 |
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| CDS GCA 72 bp | ATGCGTTTTTGGTCCCTCTTCCGCCAGGCAGGGTCATaGAAGTGGCGAAATGTCTGGTACCCAGTTGTGATT | + |
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Preference number: 6 (lower is better) Translates to: MRFWSLFRQAGS*KWRNVWYPVVI Trigger: AATCACAACTGGGTACCAGACATTTCGCCACTTGCATGACCCTGCCTGGCGGAAGAGGGACCAAAAACGCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064701.8 ENSMUST00000133176.8 |
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| CDS CAA 72 bp | CTTGAACTGTTCCTGTTTTTGAGCCGCAATGCGTTTTaGGTCCCTCTTCCGCCAGGCAGGGTCATGCAAGTG | + |
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Preference number: 6 (lower is better) Translates to: LELFLFLSRNAF*VPLPPGRVMQV Trigger: CACTTGCATGACCCTGCCTGGCGGAAGAGGGACCAAAAACGCATTGCGGCTCAAAAACAGGAACAGTTCAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064701.8 |
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| CDS TCA 72 bp | ACTTCACAGTGTTCAGGCCTCCCTCCCGGTCCACCTTaGACTGTTCCTGTTTTTGAGCCGCAATGCGTTTTT | + |
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Preference number: 6 (lower is better) Translates to: TSQCSGLPPGPP*TVPVFEPQCVF Trigger: AAAAACGCATTGCGGCTCAAAAACAGGAACAGTTCAAGGTGGACCGGGAGGGAGGCCTGAACACTGTGAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064701.8 |
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