Pregenerated sensors for B4GALT6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056124Ensembl transcript IDs: ENSMUST00000070080.6
Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTACAGTGTGGGTCCCAGGGATCAAATGCAGGTTGTCAGGCTTGGTaGAGGCACCTTTACACCCTGAGCCATCTCAAGGGCCTACAACTG | + |
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Preference number: 1 (lower is better) Translates to: LQCGSQGSNAGCQAW*RHLYTLSHLKGLQL Trigger: CAGTTGTAGGCCCTTGAGATGGCTCAGGGTGTAAAGGTGCCTGCACCAAGCCTGACAACCTGCATTTGATCCCTGGGACCCACACTGTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
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| 3UTR CCA 90 bp | CTTCTACAGTGTGGGTCCCAGGGATCAAATGCAGGTTGTCAGGCTTaGTGCAGGCACCTTTACACCCTGAGCCATCTCAAGGGCCTACAA | + |
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Preference number: 1 (lower is better) Translates to: LLQCGSQGSNAGCQA*CRHLYTLSHLKGLQ Trigger: TTGTAGGCCCTTGAGATGGCTCAGGGTGTAAAGGTGCCTGCACCAAGCCTGACAACCTGCATTTGATCCCTGGGACCCACACTGTAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
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| 3UTR GCA 90 bp | TGCGAGTCCTTCCTTCCTTCGAAGCCCTCAGAGGACCGTGCCTCCTaGCATGAGGCTGAAGGTCTAAAGCTGAACACCAATAGTACAGAA | + |
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Preference number: 1 (lower is better) Translates to: CESFLPSKPSEDRAS*HEAEGLKLNTNSTE Trigger: TTCTGTACTATTGGTGTTCAGCTTTAGACCTTCAGCCTCATGGCAGGAGGCACGGTCCTCTGAGGGCTTCGAAGGAAGGAAGGACTCGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
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| 3UTR TCA 90 bp | ACACCAATAGTACAGAACGGTTACTATATTATCTTTGTCTGTCGCTaGCAGTCCCTTCATTTGACACAAGGCTTAACCTTTGTTTGGCGA | + |
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Preference number: 1 (lower is better) Translates to: TPIVQNGYYIIFVCR*QSLHLTQGLTFVWR Trigger: TCGCCAAACAAAGGTTAAGCCTTGTGTCAAATGAAGGGACTGTCAGCGACAGACAAAGATAATATAGTAACCGTTCTGTACTATTGGTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
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| 3UTR GCA 90 bp | TCACTTTACAACTGGGAAGGTTTTCTTGGTAATACTCATGCAGTATaGATAAACAATATGGCTGTTGACTTGGCAAGATCTGATGAGACT | + |
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Preference number: 1 (lower is better) Translates to: SLYNWEGFLGNTHAV*INNMAVDLARSDET Trigger: AGTCTCATCAGATCTTGCCAAGTCAACAGCCATATTGTTTATGCATACTGCATGAGTATTACCAAGAAAACCTTCCCAGTTGTAAAGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
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| 3UTR-3UTR GCA 90 bp | GTGGGTCCCAGGGATCAAATGCAGGTTGTCAGGCTTGGTGCAGGCACCTTTACAGAGGACCGTGCCTCCTaGCATGAGGCTGAAGGTCTA | + |
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Preference number: 2 (lower is better) Translates to: VGPRDQMQVVRLGAGTFTEDRAS*HEAEGL Trigger: TAGACCTTCAGCCTCATGGCAGGAGGCACGGTCCTC...TGTAAAGGTGCCTGCACCAAGCCTGACAACCTGCATTTGATCCCTGGGACCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
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| 3UTR CAA 90 bp | ACTTCTACAGTGTGGGTCCCAGGGATCAAATGCAGGTTGTCAGGCTaGGTGCAGGCACCTTTACACCCTGAGCCATCTCAAGGGCCTACA | + |
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Preference number: 2 (lower is better) Translates to: TSTVWVPGIKCRLSG*VQAPLHPEPSQGPT Trigger: TGTAGGCCCTTGAGATGGCTCAGGGTGTAAAGGTGCCTGCACCAAGCCTGACAACCTGCATTTGATCCCTGGGACCCACACTGTAGAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
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| 3UTR-3UTR GCA 90 bp | GGAGACAGACACCCAGTGCAAAGCCACCAAATAGATTTGATTCTATCAGACTGCAGGCCCTCGGCTCACTaGCCAGCACCATGGTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: GDRHPVQSHQIDLILSDCRPSAH*PAPWWW Trigger: CCACCACCATGGTGCTGGGCAGTGAGCCGAGGGCCT...GCAGTCTGATAGAATCAAATCTATTTGGTGGCTTTGCACTGGGTGTCTGTCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
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| 3UTR CAA 90 bp | GAGGTCTCTACTTCTACAGTGTGGGTCCCAGGGATCAAATGCAGGTaGTCAGGCTTGGTGCAGGCACCTTTACACCCTGAGCCATCTCAA | + |
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Preference number: 2 (lower is better) Translates to: EVSTSTVWVPGIKCR*SGLVQAPLHPEPSQ Trigger: TTGAGATGGCTCAGGGTGTAAAGGTGCCTGCACCAAGCCTGACAACCTGCATTTGATCCCTGGGACCCACACTGTAGAAGTAGAGACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
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| 3UTR-3UTR CCA 90 bp | GGAGACAGACACCCAGTGCAAAGCCACCAAATAGATTTGATTCTATCAGACTGCCCAGCAGGGGGAGAGTaGGAGAGTGTGACGGATGGA | + |
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Preference number: 2 (lower is better) Translates to: GDRHPVQSHQIDLILSDCPAGGE*ESVTDG Trigger: TCCATCCGTCACACTCTCCCACTCTCCCCCTGCTGG...GCAGTCTGATAGAATCAAATCTATTTGGTGGCTTTGCACTGGGTGTCTGTCTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
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| 3UTR-3UTR CCA 90 bp | GAAAATCAGATAGAATGTGGGAAATCAATGAATGTAGGAACTTTCTCCCCATCACTACAGTGCTTGCCATaGGGGGACGCTCCCAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: ENQIECGKSMNVGTFSPSLQCLP*GDAPSR Trigger: CCTGCTGGGAGCGTCCCCCCATGGCAAGCACTGTAG...TGATGGGGAGAAAGTTCCTACATTCATTGATTTCCCACATTCTATCTGATTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
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| 3UTR-3UTR CCA 90 bp | CACCAAATAGATTTGATTCTATCAGACTGCCTGCTTGTGCTAATATGTAAGAAACACTGCCCAGCACCATaGTGGTGGTGGTGGGGTGGT | + |
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Preference number: 2 (lower is better) Translates to: HQIDLILSDCLLVLICKKHCPAP*WWWWGG Trigger: ACCACCCCACCACCACCACCATGGTGCTGGGCAGTG...TTTCTTACATATTAGCACAAGCAGGCAGTCTGATAGAATCAAATCTATTTGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
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| 3UTR-3UTR CCA 90 bp | ACACAAATCTGCTTCCCCCAGGGATCTCCAAAGGGACAATATTGTATTGATAATAACCTCACCCGTGTGTaGAGGGTGAGCAGAAGTCAC | + |
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Preference number: 2 (lower is better) Translates to: TQICFPQGSPKGQYCIDNNLTRV*RVSRSH Trigger: GTGACTTCTGCTCACCCTCCACACACGGGTGAGGTT...ATTATCAATACAATATTGTCCCTTTGGAGATCCCTGGGGGAAGCAGATTTGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
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| 3UTR-3UTR TCA 90 bp | AAGTCCTGTACAGCACGTCACTTTACAACTGGGAAGGTTTTCTTGGTAATACTCTCCAAGCCAAGTTCATaGTCCAGCACTGTGGTCTAC | + |
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Preference number: 2 (lower is better) Translates to: KSCTARHFTTGKVFLVILSKPSS*SSTVVY Trigger: GTAGACCACAGTGCTGGATCATGAACTTGGCTTGGA...GAGTATTACCAAGAAAACCTTCCCAGTTGTAAAGTGACGTGCTGTACAGGACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
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| 3UTR-3UTR GCA 90 bp | GGAGACAGACACCCAGTGCAAAGCCACCAAATAGATTTGATTCTATCAGACTGCCAGGAAGAAAAGTTATaGGAGTCCTTCCTTCCTTCG | + |
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Preference number: 2 (lower is better) Translates to: GDRHPVQSHQIDLILSDCQEEKL*ESFLPS Trigger: CGAAGGAAGGAAGGACTCGCATAACTTTTCTTCCTG...GCAGTCTGATAGAATCAAATCTATTTGGTGGCTTTGCACTGGGTGTCTGTCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
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| 3UTR-3UTR TCA 90 bp | ATCTGCAAACCCAAGGCAAGAAATCTAGAGTGTTATTTATCTGAAAGGTACATACCCGTGTGTGGAGGGTaGGCAGAAGTCACAATATCC | + |
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Preference number: 2 (lower is better) Translates to: ICKPKARNLECYLSERYIPVCGG*AEVTIS Trigger: GGATATTGTGACTTCTGCTCACCCTCCACACACGGG...TATGTACCTTTCAGATAAATAACACTCTAGATTTCTTGCCTTGGGTTTGCAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
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| 3UTR-3UTR CCA 90 bp | AGCAATTCTAAGAATAAACACGGAGAGATTGCTGTCACAACAGGGCATCTGTCTATATGGCTGTTGACTTaGCAAGATCTGATGAGACTG | + |
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Preference number: 2 (lower is better) Translates to: SNSKNKHGEIAVTTGHLSIWLLT*QDLMRL Trigger: CAGTCTCATCAGATCTTGCCAAGTCAACAGCCATAT...AGACAGATGCCCTGTTGTGACAGCAATCTCTCCGTGTTTATTCTTAGAATTGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
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| 3UTR-3UTR TCA 90 bp | TCTGTCTTCTCCGGTGCAAGAATTTTAGTTATCACTGTAGGGTTTGACTTGTGGACAGACAATGACAACTaGAAGCTAAGCTCTCAACAT | + |
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Preference number: 2 (lower is better) Translates to: SVFSGARILVITVGFDLWTDNDN*KLSSQH Trigger: ATGTTGAGAGCTTAGCTTTCAGTTGTCATTGTCTGT...CCACAAGTCAAACCCTACAGTGATAACTAAAATTCTTGCACCGGAGAAGACAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
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| 3UTR-3UTR CCA 90 bp | GAAAATCAGATAGAATGTGGGAAATCAATGAATGTAGGAACTTTCTCCCCATCATCCAGTCCCAAGCAATaGGTTCTTATCTCTACAGTG | + |
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Preference number: 2 (lower is better) Translates to: ENQIECGKSMNVGTFSPSSSPKQ*VLISTV Trigger: CACTGTAGAGATAAGAACCCATTGCTTGGGACTGGA...TGATGGGGAGAAAGTTCCTACATTCATTGATTTCCCACATTCTATCTGATTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
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| 3UTR-3UTR CCA 90 bp | TCTGTCTTCTCCGGTGCAAGAATTTTAGTTATCACTGTAGGGTTTGACTTGTGGAGTAAGAACACTATTTaGGCTTTGTTGTTGTCTGGT | + |
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Preference number: 2 (lower is better) Translates to: SVFSGARILVITVGFDLWSKNTI*ALLLSG Trigger: ACCAGACAACAACAAAGCCCAAATAGTGTTCTTACT...CCACAAGTCAAACCCTACAGTGATAACTAAAATTCTTGCACCGGAGAAGACAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
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| 3UTR CAA 90 bp | CACAAATCTGCTTCCCCCAGGGATCTCCAAAGGGACAATATTGTATaGATAATGCTTCCATTTCCTTTTACAAGGGTTATCAGTATCAAT | + |
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Preference number: 2 (lower is better) Translates to: HKSASPRDLQRDNIV*IMLPFPFTRVISIN Trigger: ATTGATACTGATAACCCTTGTAAAAGGAAATGGAAGCATTATCAATACAATATTGTCCCTTTGGAGATCCCTGGGGGAAGCAGATTTGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
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| 3UTR-3UTR GCA 90 bp | GCAAAACTGTCATCCATGGAAACATACCCAGGTCACTATTCATTACTGAAAAGAGTAAACATTAAGGATTaGTGGCTCTTTTTACAGACC | + |
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Preference number: 2 (lower is better) Translates to: AKLSSMETYPGHYSLLKRVNIKD*WLFLQT Trigger: GGTCTGTAAAAAGAGCCAGCAATCCTTAATGTTTAC...TCTTTTCAGTAATGAATAGTGACCTGGGTATGTTTCCATGGATGACAGTTTTGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
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| 3UTR-3UTR TCA 90 bp | CACCAAATAGATTTGATTCTATCAGACTGCCTGCTTGTGCTAATATGTAAGAAAAACTATGACAGACAATaGCAACTGAAAGCTAAGCTC | + |
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Preference number: 2 (lower is better) Translates to: HQIDLILSDCLLVLICKKNYDRQ*QLKAKL Trigger: GAGCTTAGCTTTCAGTTGTCATTGTCTGTCATAGTT...TTTCTTACATATTAGCACAAGCAGGCAGTCTGATAGAATCAAATCTATTTGGTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
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| 3UTR CCA 72 bp | GTCTATAGGCCCTCGGCTCACTGCCCAGCACCATGGTaGTGGTGGTGGGGTGGTGGTGGTGGTGGTAGGCAT | + |
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Preference number: 3 (lower is better) Translates to: VYRPSAHCPAPW*WWWGGGGGGRH Trigger: ATGCCTACCACCACCACCACCACCCCACCACCACCACCATGGTGCTGGGCAGTGAGCCGAGGGCCTATAGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
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| 3UTR CCA 72 bp | CCAAGCAATGGGTTCTTATCTCTACAGTGCTTGCCATaGGGGGACGCTCCCAGCAGGGGGAGAGTGGGAGAG | + |
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Preference number: 3 (lower is better) Translates to: PSNGFLSLQCLP*GDAPSRGRVGE Trigger: CTCTCCCACTCTCCCCCTGCTGGGAGCGTCCCCCCATGGCAAGCACTGTAGAGATAAGAACCCATTGCTTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
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| 3UTR GCA 72 bp | GGGTCCCAGGGATCAAATGCAGGTTGTCAGGCTTGGTaGAGGCACCTTTACACCCTGAGCCATCTCAAGGGC | + |
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Preference number: 3 (lower is better) Translates to: GSQGSNAGCQAW*RHLYTLSHLKG Trigger: GCCCTTGAGATGGCTCAGGGTGTAAAGGTGCCTGCACCAAGCCTGACAACCTGCATTTGATCCCTGGGACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
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| 3UTR CCA 72 bp | TGTGGGTCCCAGGGATCAAATGCAGGTTGTCAGGCTTaGTGCAGGCACCTTTACACCCTGAGCCATCTCAAG | + |
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Preference number: 3 (lower is better) Translates to: CGSQGSNAGCQA*CRHLYTLSHLK Trigger: CTTGAGATGGCTCAGGGTGTAAAGGTGCCTGCACCAAGCCTGACAACCTGCATTTGATCCCTGGGACCCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
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| 3UTR GCA 72 bp | TTCCTTCCTTCGAAGCCCTCAGAGGACCGTGCCTCCTaGCATGAGGCTGAAGGTCTAAAGCTGAACACCAAT | + |
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Preference number: 3 (lower is better) Translates to: FLPSKPSEDRAS*HEAEGLKLNTN Trigger: ATTGGTGTTCAGCTTTAGACCTTCAGCCTCATGGCAGGAGGCACGGTCCTCTGAGGGCTTCGAAGGAAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
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| 3UTR-3UTR CAA 90 bp | GTGGGTCCCAGGGATCAAATGCAGGTTGTCAGGCTTGGTGCAGGCACCTTTACAAGAAGATACCCTCTTTaGGTTCTTCTAAGGTGGGAA | + |
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Preference number: 3 (lower is better) Translates to: VGPRDQMQVVRLGAGTFTRRYPL*VLLRWE Trigger: TTCCCACCTTAGAAGAACCAAAAGAGGGTATCTTCT...TGTAAAGGTGCCTGCACCAAGCCTGACAACCTGCATTTGATCCCTGGGACCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
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| 3UTR CCA 72 bp | TGTTGTTGTCTGGTCATTGAAAACCTCACCCGTGTGTaGAGGGTGAGCAGAAGTCACAATATCCACACAGTC | + |
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Preference number: 3 (lower is better) Translates to: CCCLVIENLTRV*RVSRSHNIHTV Trigger: GACTGTGTGGATATTGTGACTTCTGCTCACCCTCCACACACGGGTGAGGTTTTCAATGACCAGACAACAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
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| 3UTR TCA 72 bp | AAGAACACTATTTGGGCTTTGTTGTTGTCTGGTCATTaGAAACCTCACCCGTGTGTGGAGGGTGAGCAGAAG | + |
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Preference number: 3 (lower is better) Translates to: KNTIWALLLSGH*KPHPCVEGEQK Trigger: CTTCTGCTCACCCTCCACACACGGGTGAGGTTTTCAATGACCAGACAACAACAAAGCCCAAATAGTGTTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
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| 3UTR TCA 72 bp | GTCTGGTCATTGAAAACCTCACCCGTGTGTGGAGGGTaGGCAGAAGTCACAATATCCACACAGTCAATTAAT | + |
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Preference number: 3 (lower is better) Translates to: VWSLKTSPVCGG*AEVTISTQSIN Trigger: ATTAATTGACTGTGTGGATATTGTGACTTCTGCTCACCCTCCACACACGGGTGAGGTTTTCAATGACCAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
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| 3UTR CCA 72 bp | CATGAAGAAGTCCTGTACAGCACGTCACTTTACAACTaGGAAGGTTTTCTTGGTAATACTCATGCAGTATGC | + |
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Preference number: 3 (lower is better) Translates to: HEEVLYSTSLYN*EGFLGNTHAVC Trigger: GCATACTGCATGAGTATTACCAAGAAAACCTTCCCAGTTGTAAAGTGACGTGCTGTACAGGACTTCTTCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
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| 3UTR-3UTR CAA 90 bp | ACACAAATCTGCTTCCCCCAGGGATCTCCAAAGGGACAATATTGTATTGATAATGTTACTATATTATCTTaGTCTGTCGCTGACAGTCCC | + |
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Preference number: 3 (lower is better) Translates to: TQICFPQGSPKGQYCIDNVTILS*SVADSP Trigger: GGGACTGTCAGCGACAGACAAAGATAATATAGTAAC...ATTATCAATACAATATTGTCCCTTTGGAGATCCCTGGGGGAAGCAGATTTGTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
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| 3UTR-3UTR CAA 90 bp | GCAAAACTGTCATCCATGGAAACATACCCAGGTCACTATTCATTACTGAAAAGAACTGGGAAGGTTTTCTaGGTAATACTCATGCAGTAT | + |
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Preference number: 3 (lower is better) Translates to: AKLSSMETYPGHYSLLKRTGKVF*VILMQY Trigger: ATACTGCATGAGTATTACCAAGAAAACCTTCCCAGT...TCTTTTCAGTAATGAATAGTGACCTGGGTATGTTTCCATGGATGACAGTTTTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
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| 3UTR-3UTR CAA 90 bp | GAAAATCAGATAGAATGTGGGAAATCAATGAATGTAGGAACTTTCTCCCCATCAGGGACCACACTAGATTaGAGACTAAGACATCTAACA | + |
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Preference number: 3 (lower is better) Translates to: ENQIECGKSMNVGTFSPSGTTLD*RLRHLT Trigger: TGTTAGATGTCTTAGTCTCAAATCTAGTGTGGTCCC...TGATGGGGAGAAAGTTCCTACATTCATTGATTTCCCACATTCTATCTGATTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
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| 3UTR TCA 72 bp | TGTGGTCATCAGCATTACCAAAACTATGACAGACAATaGCAACTGAAAGCTAAGCTCTCAACATTAGACAAG | + |
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Preference number: 3 (lower is better) Translates to: CGHQHYQNYDRQ*QLKAKLSTLDK Trigger: CTTGTCTAATGTTGAGAGCTTAGCTTTCAGTTGTCATTGTCTGTCATAGTTTTGGTAATGCTGATGACCACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
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| 3UTR GCA 72 bp | AACTGGGAAGGTTTTCTTGGTAATACTCATGCAGTATaGATAAACAATATGGCTGTTGACTTGGCAAGATCT | + |
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Preference number: 3 (lower is better) Translates to: NWEGFLGNTHAV*INNMAVDLARS Trigger: AGATCTTGCCAAGTCAACAGCCATATTGTTTATGCATACTGCATGAGTATTACCAAGAAAACCTTCCCAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
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| 3UTR CAA 72 bp | GTGTGGGTCCCAGGGATCAAATGCAGGTTGTCAGGCTaGGTGCAGGCACCTTTACACCCTGAGCCATCTCAA | + |
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Preference number: 4 (lower is better) Translates to: VWVPGIKCRLSG*VQAPLHPEPSQ Trigger: TTGAGATGGCTCAGGGTGTAAAGGTGCCTGCACCAAGCCTGACAACCTGCATTTGATCCCTGGGACCCACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
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| 3UTR CAA 72 bp | ACTTCTACAGTGTGGGTCCCAGGGATCAAATGCAGGTaGTCAGGCTTGGTGCAGGCACCTTTACACCCTGAG | + |
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Preference number: 4 (lower is better) Translates to: TSTVWVPGIKCR*SGLVQAPLHPE Trigger: CTCAGGGTGTAAAGGTGCCTGCACCAAGCCTGACAACCTGCATTTGATCCCTGGGACCCACACTGTAGAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
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| CDS-3UTR GCA 90 bp | GTGGGTCCCAGGGATCAAATGCAGGTTGTCAGGCTTGGTGCAGGCACCTTTACAAGTCCATCGATGTACTaGCGCTCCTTGGAATACCGA | + |
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Preference number: 4 (lower is better) Translates to: VGPRDQMQVVRLGAGTFTSPSMY*RSLEYR Trigger: TCGGTATTCCAAGGAGCGGCAGTACATCGATGGACT...TGTAAAGGTGCCTGCACCAAGCCTGACAACCTGCATTTGATCCCTGGGACCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
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| CDS-3UTR TCA 90 bp | GGAGACAGACACCCAGTGCAAAGCCACCAAATAGATTTGATTCTATCAGACTGCGGTTACGGAAGGGGATaGGAACTGCCACCTTCCATC | + |
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Preference number: 4 (lower is better) Translates to: GDRHPVQSHQIDLILSDCGYGRG*ELPPSI Trigger: GATGGAAGGTGGCAGTTCTCATCCCCTTCCGTAACC...GCAGTCTGATAGAATCAAATCTATTTGGTGGCTTTGCACTGGGTGTCTGTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
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| CDS-3UTR CCA 90 bp | AGTTTTCTTCACTTCCAGTCCCAAGCAATGGGTTCTTATCTCTACAGTGCTTGCTCTTTGGGCCTCCAGTaGCCTCCTGGCCCAATCTCT | + |
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Preference number: 4 (lower is better) Translates to: SFLHFQSQAMGSYLYSACSLGLQ*PPGPIS Trigger: AGAGATTGGGCCAGGAGGCCACTGGAGGCCCAAAGA...GCAAGCACTGTAGAGATAAGAACCCATTGCTTGGGACTGGAAGTGAAGAAAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
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| CDS-3UTR CCA 90 bp | AGCAATTCTAAGAATAAACACGGAGAGATTGCTGTCACAACAGGGCATCTGTCTTGGGCTTGCAGTCTTTaGGCCTCCAGTGGCCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: SNSKNKHGEIAVTTGHLSWACSL*ASSGLL Trigger: CAGGAGGCCACTGGAGGCCCAAAGACTGCAAGCCCA...AGACAGATGCCCTGTTGTGACAGCAATCTCTCCGTGTTTATTCTTAGAATTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
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| CDS-3UTR CCA 90 bp | AGTTTTCTTCACTTCCAGTCCCAAGCAATGGGTTCTTATCTCTACAGTGCTTGCCTGCCACCTTCCATCTaGGCTTGCAGTCTTTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: SFLHFQSQAMGSYLYSACLPPSI*ACSLWA Trigger: GGCCCAAAGACTGCAAGCCCAGATGGAAGGTGGCAG...GCAAGCACTGTAGAGATAAGAACCCATTGCTTGGGACTGGAAGTGAAGAAAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
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| CDS-3UTR TCA 90 bp | GAACACTATTTGGGCTTTGTTGTTGTCTGGTCATTGAAAACCTCACCCGTGTGTTCCTGGCCCAATCTCTaGGTCCTTGGAGAAGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: EHYLGFVVVWSLKTSPVCSWPNL*VLGEEL Trigger: CAGCTCTTCTCCAAGGACTCAGAGATTGGGCCAGGA...ACACACGGGTGAGGTTTTCAATGACCAGACAACAACAAAGCCCAAATAGTGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
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| CDS-3UTR CCA 90 bp | GAACACTATTTGGGCTTTGTTGTTGTCTGGTCATTGAAAACCTCACCCGTGTGTTCCAGCCGCTGTTTCTaGAGCATCGGAATCAGGTGC | + |
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Preference number: 4 (lower is better) Translates to: EHYLGFVVVWSLKTSPVCSSRCF*SIGIRC Trigger: GCACCTGATTCCGATGCTCCAGAAACAGCGGCTGGA...ACACACGGGTGAGGTTTTCAATGACCAGACAACAACAAAGCCCAAATAGTGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
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| CDS-3UTR CCA 90 bp | AGTTTTCTTCACTTCCAGTCCCAAGCAATGGGTTCTTATCTCTACAGTGCTTGCCAATCAGAGAGCGATTaGAGACCCGCATCATCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: SFLHFQSQAMGSYLYSACQSESD*RPASSA Trigger: AGCGGATGATGCGGGTCTCCAATCGCTCTCTGATTG...GCAAGCACTGTAGAGATAAGAACCCATTGCTTGGGACTGGAAGTGAAGAAAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
||
| CDS-3UTR CCA 90 bp | TCTGTCTTCTCCGGTGCAAGAATTTTAGTTATCACTGTAGGGTTTGACTTGTGGGTAAGGCAGCTTCTCTaGACAGGGGAGGTGTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SVFSGARILVITVGFDLWVRQLL*TGEVWQ Trigger: TTGCCACACCTCCCCTGTCCAGAGAAGCTGCCTTAC...CCACAAGTCAAACCCTACAGTGATAACTAAAATTCTTGCACCGGAGAAGACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
||
| CDS-3UTR GCA 90 bp | ACACAAATCTGCTTCCCCCAGGGATCTCCAAAGGGACAATATTGTATTGATAATCCTTCCATCTGGGCTTaGAGTCTTTGGGCCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TQICFPQGSPKGQYCIDNPSIWA*SLWASS Trigger: ACTGGAGGCCCAAAGACTGCAAGCCCAGATGGAAGG...ATTATCAATACAATATTGTCCCTTTGGAGATCCCTGGGGGAAGCAGATTTGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
||
| CDS-3UTR TCA 90 bp | GGAGACAGACACCCAGTGCAAAGCCACCAAATAGATTTGATTCTATCAGACTGCTCCTTGGAGAAGAGCTaGTGGACTTCATCAAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: GDRHPVQSHQIDLILSDCSLEKS*WTSSKL Trigger: CAGTTTTGATGAAGTCCATCAGCTCTTCTCCAAGGA...GCAGTCTGATAGAATCAAATCTATTTGGTGGCTTTGCACTGGGTGTCTGTCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
||
| CDS-3UTR GCA 90 bp | ACACAAATCTGCTTCCCCCAGGGATCTCCAAAGGGACAATATTGTATTGATAATGAAGGGGATGAGAACTaGCACCTTCCATCTGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TQICFPQGSPKGQYCIDNEGDEN*HLPSGL Trigger: AAGCCCAGATGGAAGGTGGCAGTTCTCATCCCCTTC...ATTATCAATACAATATTGTCCCTTTGGAGATCCCTGGGGGAAGCAGATTTGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
||
| CDS-3UTR CCA 90 bp | AGTTTTCTTCACTTCCAGTCCCAAGCAATGGGTTCTTATCTCTACAGTGCTTGCTGGACAGGGGAGGTGTaGCAAATACGTGAAGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SFLHFQSQAMGSYLYSACWTGEV*QIREVL Trigger: CAAAACTTCACGTATTTGCCACACCTCCCCTGTCCA...GCAAGCACTGTAGAGATAAGAACCCATTGCTTGGGACTGGAAGTGAAGAAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
||
| CDS-3UTR TCA 90 bp | GGAGACAGACACCCAGTGCAAAGCCACCAAATAGATTTGATTCTATCAGACTGCTCATTTTCAGGCAGATaGTCCACATCATGGAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: GDRHPVQSHQIDLILSDCSFSGR*STSWKI Trigger: GATCTTCCATGATGTGGATCATCTGCCTGAAAATGA...GCAGTCTGATAGAATCAAATCTATTTGGTGGCTTTGCACTGGGTGTCTGTCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
||
| CDS-3UTR GCA 90 bp | GTGGCAGGAAGAAAAGTTATGCGAGTCCTTCCTTCCTTCGAAGCCCTCAGAGGAAGTCACTTGTATTATTaGCTTCAGGATAATCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VAGRKVMRVLPSFEALRGSHLYY*LQDNLF Trigger: GAACAGATTATCCTGAAGGCAATAATACAAGTGACT...TCCTCTGAGGGCTTCGAAGGAAGGAAGGACTCGCATAACTTTTCTTCCTGCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
||
| CDS-3UTR GCA 90 bp | ACACAAATCTGCTTCCCCCAGGGATCTCCAAAGGGACAATATTGTATTGATAATTTGATCTTCCTGAATTaGTCCACCGTCAGGCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: TQICFPQGSPKGQYCIDNLIFLN*STVRPL Trigger: GAGTGGCCTGACGGTGGAGCAATTCAGGAAGATCAA...ATTATCAATACAATATTGTCCCTTTGGAGATCCCTGGGGGAAGCAGATTTGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
||
| CDS-3UTR CCA 90 bp | ACACAAATCTGCTTCCCCCAGGGATCTCCAAAGGGACAATATTGTATTGATAATATCGGAAGATGTTCATaGCGGTTACGGAAGGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: TQICFPQGSPKGQYCIDNIGRCS*RLRKGM Trigger: CATCCCCTTCCGTAACCGCCATGAACATCTTCCGAT...ATTATCAATACAATATTGTCCCTTTGGAGATCCCTGGGGGAAGCAGATTTGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
||
| 3UTR CAA 72 bp | ATTTTAGAAGCAATTCTAAGAATAAACACGGAGAGATaGCTGTCACAACAGGGCATCTGTCTTCTCCGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ILEAILRINTER*LSQQGICLLRC Trigger: GCACCGGAGAAGACAGATGCCCTGTTGTGACAGCAATCTCTCCGTGTTTATTCTTAGAATTGCTTCTAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
||
| CDS-3UTR TCA 90 bp | CACCAAATAGATTTGATTCTATCAGACTGCCTGCTTGTGCTAATATGTAAGAAACTGGAGCCACATAGATaGAGTAGAGACAGGACGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HQIDLILSDCLLVLICKKLEPHR*SRDRTW Trigger: CCACGTCCTGTCTCTACTTCATCTATGTGGCTCCAG...TTTCTTACATATTAGCACAAGCAGGCAGTCTGATAGAATCAAATCTATTTGGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
||
| CDS-3UTR TCA 90 bp | ACACAAATCTGCTTCCCCCAGGGATCTCCAAAGGGACAATATTGTATTGATAATTGCCGGTCTGTTCGATaGCATAAAAGGCAAATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TQICFPQGSPKGQYCIDNCRSVR*HKRQIP Trigger: TGGAATTTGCCTTTTATGTCATCGAACAGACCGGCA...ATTATCAATACAATATTGTCCCTTTGGAGATCCCTGGGGGAAGCAGATTTGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
||
| CDS-3UTR TCA 90 bp | CACCAAATAGATTTGATTCTATCAGACTGCCTGCTTGTGCTAATATGTAAGAAAAGAGCATCGCACGATTaGATGGTTGTGTGCCGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: HQIDLILSDCLLVLICKKRASHD*MVVCRS Trigger: AGACCGGCACACAACCATTCAATCGTGCGATGCTCT...TTTCTTACATATTAGCACAAGCAGGCAGTCTGATAGAATCAAATCTATTTGGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
||
| 3UTR CAA 72 bp | GCTTCCCCCAGGGATCTCCAAAGGGACAATATTGTATaGATAATGCTTCCATTTCCTTTTACAAGGGTTATC | + |
|
Preference number: 4 (lower is better) Translates to: ASPRDLQRDNIV*IMLPFPFTRVI Trigger: GATAACCCTTGTAAAAGGAAATGGAAGCATTATCAATACAATATTGTCCCTTTGGAGATCCCTGGGGGAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
||
| CDS-3UTR TCA 90 bp | GAAAATCAGATAGAATGTGGGAAATCAATGAATGTAGGAACTTTCTCCCCATCAGGGAGAAGAAGAAGATaGAGGCAATCAGAGAGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: ENQIECGKSMNVGTFSPSGRRRR*RQSESD Trigger: ATCGCTCTCTGATTGCCTTCATCTTCTTCTTCTCCC...TGATGGGGAGAAAGTTCCTACATTCATTGATTTCCCACATTCTATCTGATTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
||
| CDS-3UTR TCA 90 bp | AGTTTTCTTCACTTCCAGTCCCAAGCAATGGGTTCTTATCTCTACAGTGCTTGCTATTGGTATACAGCCTaGTCATGTGTCCAATTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SFLHFQSQAMGSYLYSACYWYTA*SCVQLF Trigger: AAACAATTGGACACATGATCAGGCTGTATACCAATA...GCAAGCACTGTAGAGATAAGAACCCATTGCTTGGGACTGGAAGTGAAGAAAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
||
| CDS-3UTR CCA 90 bp | GAAAATCAGATAGAATGTGGGAAATCAATGAATGTAGGAACTTTCTCCCCATCACAATCTCTGAGTCCTTaGAGAAGAGCTGATGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: ENQIECGKSMNVGTFSPSQSLSP*RRADGL Trigger: AAGTCCATCAGCTCTTCTCCAAGGACTCAGAGATTG...TGATGGGGAGAAAGTTCCTACATTCATTGATTTCCCACATTCTATCTGATTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
||
| CDS-3UTR GCA 90 bp | CACCAAATAGATTTGATTCTATCAGACTGCCTGCTTGTGCTAATATGTAAGAAAAAATACGTGAAGTTTTaGGGAAGATACGTTGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: HQIDLILSDCLLVLICKKKYVKF*GRYVVV Trigger: AACAACAACGTATCTTCCGCAAAACTTCACGTATTT...TTTCTTACATATTAGCACAAGCAGGCAGTCTGATAGAATCAAATCTATTTGGTG 34% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
||
| CDS-3UTR CAA 90 bp | GTGGGTCCCAGGGATCAAATGCAGGTTGTCAGGCTTGGTGCAGGCACCTTTACAGTTGATCTTCCTGAATaGCTCCACCGTCAGGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: VGPRDQMQVVRLGAGTFTVDLPE*LHRQAT Trigger: AGTGGCCTGACGGTGGAGCAATTCAGGAAGATCAAC...TGTAAAGGTGCCTGCACCAAGCCTGACAACCTGCATTTGATCCCTGGGACCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
||
| CDS-3UTR CAA 90 bp | GTGGCAGGAAGAAAAGTTATGCGAGTCCTTCCTTCCTTCGAAGCCCTCAGAGGACTGATCTCACTCACATaGACACTGAGGAATCCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: VAGRKVMRVLPSFEALRGLISLT*TLRNPR Trigger: GCGGGGATTCCTCAGTGTCAATGTGAGTGAGATCAG...TCCTCTGAGGGCTTCGAAGGAAGGAAGGACTCGCATAACTTTTCTTCCTGCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
||
| CDS CCA 90 bp | GATACCTCTAGCTTGTACCATAAAGAGGTACGTGTTGGCGATGCCTaGAGCCACATAGATGAAGTAGAGACAGGACGTGGAGAGGGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: DTSSLYHKEVRVGDA*SHIDEVETGRGEGE Trigger: TTCTCCCTCTCCACGTCCTGTCTCTACTTCATCTATGTGGCTCCAGGCATCGCCAACACGTACCTCTTTATGGTACAAGCTAGAGGTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
||
| CDS-3UTR CAA 90 bp | GAACACTATTTGGGCTTTGTTGTTGTCTGGTCATTGAAAACCTCACCCGTGTGTACCTTCCATCTGGGCTaGCAGTCTTTGGGCCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: EHYLGFVVVWSLKTSPVCTFHLG*QSLGLQ Trigger: CTGGAGGCCCAAAGACTGCAAGCCCAGATGGAAGGT...ACACACGGGTGAGGTTTTCAATGACCAGACAACAACAAAGCCCAAATAGTGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
||
| CDS-3UTR CAA 90 bp | GTGGGTCCCAGGGATCAAATGCAGGTTGTCAGGCTTGGTGCAGGCACCTTTACAGAACAAGATAGTCACTaGTATTATTGCCTTCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: VGPRDQMQVVRLGAGTFTEQDSH*YYCLQD Trigger: ATCCTGAAGGCAATAATACAAGTGACTATCTTGTTC...TGTAAAGGTGCCTGCACCAAGCCTGACAACCTGCATTTGATCCCTGGGACCCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
||
| CDS TCA 90 bp | GCATGTAAGGCAGCTTCTCTGGACAGGGGAGGTGTGGCAAATACGTaGAGTTTTGCGGAAGATACGTTGTTGTTTGAACAAGATAGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: ACKAASLDRGGVANT*SFAEDTLLFEQDSH Trigger: GTGACTATCTTGTTCAAACAACAACGTATCTTCCGCAAAACTTCACGTATTTGCCACACCTCCCCTGTCCAGAGAAGCTGCCTTACATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
||
| CDS-3UTR CAA 90 bp | AAGTCCTGTACAGCACGTCACTTTACAACTGGGAAGGTTTTCTTGGTAATACTCAAGAGCATCGCACGATaGAATGGTTGTGTGCCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: KSCTARHFTTGKVFLVILKSIAR*NGCVPV Trigger: GACCGGCACACAACCATTCAATCGTGCGATGCTCTT...GAGTATTACCAAGAAAACCTTCCCAGTTGTAAAGTGACGTGCTGTACAGGACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
||
| CDS-3UTR CAA 90 bp | ACACAAATCTGCTTCCCCCAGGGATCTCCAAAGGGACAATATTGTATTGATAATCATCCCCAGAAGGCATaGGGAAAGCCGTTGATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TQICFPQGSPKGQYCIDNHPQKA*GKPLIF Trigger: GAAGATCAACGGCTTTCCCAATGCCTTCTGGGGATG...ATTATCAATACAATATTGTCCCTTTGGAGATCCCTGGGGGAAGCAGATTTGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
||
| CDS-3UTR CAA 90 bp | CACCAAATAGATTTGATTCTATCAGACTGCCTGCTTGTGCTAATATGTAAGAAAGCAATCAGAGAGCGATaGGAGACCCGCATCATCCGC | + |
|
Preference number: 5 (lower is better) Translates to: HQIDLILSDCLLVLICKKAIRER*ETRIIR Trigger: GCGGATGATGCGGGTCTCCAATCGCTCTCTGATTGC...TTTCTTACATATTAGCACAAGCAGGCAGTCTGATAGAATCAAATCTATTTGGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
||
| CDS-3UTR CAA 90 bp | ACACAAATCTGCTTCCCCCAGGGATCTCCAAAGGGACAATATTGTATTGATAATGCATTGGGAAAGCCGTaGATCTTCCTGAATTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TQICFPQGSPKGQYCIDNALGKP*IFLNCS Trigger: GGAGCAATTCAGGAAGATCAACGGCTTTCCCAATGC...ATTATCAATACAATATTGTCCCTTTGGAGATCCCTGGGGGAAGCAGATTTGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
||
| CDS CCA 90 bp | GTGTGTATAATAAATTGTTCAGTCCATCGATGTACTGCCGCTCCTTaGAATACCGAAGTAATTTATACCGTCCTAGGAACTGTACCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: VCIINCSVHRCTAAP*NTEVIYTVLGTVPP Trigger: GGGAGGTACAGTTCCTAGGACGGTATAAATTACTTCGGTATTCCAAGGAGCGGCAGTACATCGATGGACTGAACAATTTATTATACACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
||
| CDS-3UTR CAA 90 bp | AGTTTTCTTCACTTCCAGTCCCAAGCAATGGGTTCTTATCTCTACAGTGCTTGCGCGGAAGATACGTTGTaGTTTGAACAAGATAGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: SFLHFQSQAMGSYLYSACAEDTL*FEQDSH Trigger: GTGACTATCTTGTTCAAACAACAACGTATCTTCCGC...GCAAGCACTGTAGAGATAAGAACCCATTGCTTGGGACTGGAAGTGAAGAAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
||
| CDS-3UTR CAA 90 bp | GGAGACAGACACCCAGTGCAAAGCCACCAAATAGATTTGATTCTATCAGACTGCCAAATACGTGAAGTTTaGCGGAAGATACGTTGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: GDRHPVQSHQIDLILSDCQIREV*RKIRCC Trigger: ACAACAACGTATCTTCCGCAAAACTTCACGTATTTG...GCAGTCTGATAGAATCAAATCTATTTGGTGGCTTTGCACTGGGTGTCTGTCTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
||
| CDS-3UTR CAA 90 bp | AGTTTTCTTCACTTCCAGTCCCAAGCAATGGGTTCTTATCTCTACAGTGCTTGCTCTTTCATGGCCTCTTaGAAACCCACATTAAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SFLHFQSQAMGSYLYSACSFMAS*KPTLKS Trigger: GCTCTTTAATGTGGGTTTCAAAGAGGCCATGAAAGA...GCAAGCACTGTAGAGATAAGAACCCATTGCTTGGGACTGGAAGTGAAGAAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
||
| CDS-3UTR CAA 90 bp | TCTGTCTTCTCCGGTGCAAGAATTTTAGTTATCACTGTAGGGTTTGACTTGTGGCATGATACCTCTAGCTaGTACCATAAAGAGGTACGT | + |
|
Preference number: 5 (lower is better) Translates to: SVFSGARILVITVGFDLWHDTSS*YHKEVR Trigger: ACGTACCTCTTTATGGTACAAGCTAGAGGTATCATG...CCACAAGTCAAACCCTACAGTGATAACTAAAATTCTTGCACCGGAGAAGACAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
||
| CDS-3UTR CAA 90 bp | AGTTTTCTTCACTTCCAGTCCCAAGCAATGGGTTCTTATCTCTACAGTGCTTGCAGCGTAGTGTTTTTATaGGTATACAGCCTGATCATG | + |
|
Preference number: 5 (lower is better) Translates to: SFLHFQSQAMGSYLYSACSVVFL*VYSLIM Trigger: CATGATCAGGCTGTATACCAATAAAAACACTACGCT...GCAAGCACTGTAGAGATAAGAACCCATTGCTTGGGACTGGAAGTGAAGAAAACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
||
| CDS-3UTR CAA 90 bp | AGTTTTCTTCACTTCCAGTCCCAAGCAATGGGTTCTTATCTCTACAGTGCTTGCTTTGCGGAAGATACGTaGTTGTTTGAACAAGATAGT | + |
|
Preference number: 5 (lower is better) Translates to: SFLHFQSQAMGSYLYSACFAEDT*LFEQDS Trigger: ACTATCTTGTTCAAACAACAACGTATCTTCCGCAAA...GCAAGCACTGTAGAGATAAGAACCCATTGCTTGGGACTGGAAGTGAAGAAAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
||
| CDS GCA 90 bp | AGTATTTTGGGTGTGTATAATAAATTGTTCAGTCCATCGATGTACTaGCGCTCCTTGGAATACCGAAGTAATTTATACCGTCCTAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SILGVYNKLFSPSMY*RSLEYRSNLYRPRN Trigger: GTTCCTAGGACGGTATAAATTACTTCGGTATTCCAAGGAGCGGCAGTACATCGATGGACTGAACAATTTATTATACACACCCAAAATACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
||
| CDS TCA 72 bp | AGAGGTACGTGTTGGCGATGCCTGGAGCCACATAGATaGAGTAGAGACAGGACGTGGAGAGGGAGAAGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: RGTCWRCLEPHR*SRDRTWRGRRR Trigger: TCTTCTTCTCCCTCTCCACGTCCTGTCTCTACTTCATCTATGTGGCTCCAGGCATCGCCAACACGTACCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
||
| CDS CCA 72 bp | CCGCATGTAAGGCAGCTTCTCTGGACAGGGGAGGTGTaGCAAATACGTGAAGTTTTGCGGAAGATACGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: PHVRQLLWTGEV*QIREVLRKIRC Trigger: ACAACGTATCTTCCGCAAAACTTCACGTATTTGCCACACCTCCCCTGTCCAGAGAAGCTGCCTTACATGCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
||
| CDS GCA 72 bp | ATAGGGAAGAATGTACATGTACTTGTCCAGCTTCGCTaGAAAGTGCCGCGGCATCTCTCCACATCCGTAGTA | + |
|
Preference number: 6 (lower is better) Translates to: IGKNVHVLVQLR*KVPRHLSTSVV Trigger: TACTACGGATGTGGAGAGATGCCGCGGCACTTTGCAGCGAAGCTGGACAAGTACATGTACATTCTTCCCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
||
| CDS CCA 72 bp | AGCTTGTACCATAAAGAGGTACGTGTTGGCGATGCCTaGAGCCACATAGATGAAGTAGAGACAGGACGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: SLYHKEVRVGDA*SHIDEVETGRG Trigger: TCCACGTCCTGTCTCTACTTCATCTATGTGGCTCCAGGCATCGCCAACACGTACCTCTTTATGGTACAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
||
| CDS TCA 72 bp | GCAGCTTCTCTGGACAGGGGAGGTGTGGCAAATACGTaGAGTTTTGCGGAAGATACGTTGTTGTTTGAACAA | + |
|
Preference number: 6 (lower is better) Translates to: AASLDRGGVANT*SFAEDTLLFEQ Trigger: TTGTTCAAACAACAACGTATCTTCCGCAAAACTTCACGTATTTGCCACACCTCCCCTGTCCAGAGAAGCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
||
| CDS CCA 72 bp | ATGAGGAATAGATATGTATTTTCCCAAGTCCCCTTCTaGCCGGGTTACATTGTAGCCGGCGTAGTGAACTCT | + |
|
Preference number: 6 (lower is better) Translates to: MRNRYVFSQVPF*PGYIVAGVVNS Trigger: AGAGTTCACTACGCCGGCTACAATGTAACCCGGCCAGAAGGGGACTTGGGAAAATACATATCTATTCCTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
||
| CDS CAA 90 bp | GTGTCCAATTGTTTTCACATTCTCTCTCAGCATGATACCTCTAGCTaGTACCATAAAGAGGTACGTGTTGGCGATGCCTGGAGCCACATA | + |
|
Preference number: 6 (lower is better) Translates to: VSNCFHILSQHDTSS*YHKEVRVGDAWSHI Trigger: TATGTGGCTCCAGGCATCGCCAACACGTACCTCTTTATGGTACAAGCTAGAGGTATCATGCTGAGAGAGAATGTGAAAACAATTGGACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
||
| CDS CAA 72 bp | TGTTTTCACATTCTCTCTCAGCATGATACCTCTAGCTaGTACCATAAAGAGGTACGTGTTGGCGATGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: CFHILSQHDTSS*YHKEVRVGDAW Trigger: CCAGGCATCGCCAACACGTACCTCTTTATGGTACAAGCTAGAGGTATCATGCTGAGAGAGAATGTGAAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
||
| CDS CAA 90 bp | AGGCAGCTTCTCTGGACAGGGGAGGTGTGGCAAATACGTGAAGTTTaGCGGAAGATACGTTGTTGTTTGAACAAGATAGTCACTTGTATT | + |
|
Preference number: 6 (lower is better) Translates to: RQLLWTGEVWQIREV*RKIRCCLNKIVTCI Trigger: AATACAAGTGACTATCTTGTTCAAACAACAACGTATCTTCCGCAAAACTTCACGTATTTGCCACACCTCCCCTGTCCAGAGAAGCTGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
||
| CDS CAA 72 bp | GAAACCCACATTAAAGAGCATCGCACGATTGAATGGTaGTGTGCCGGTCTGTTCGATGACATAAAAGGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: ETHIKEHRTIEW*CAGLFDDIKGK Trigger: TTTGCCTTTTATGTCATCGAACAGACCGGCACACAACCATTCAATCGTGCGATGCTCTTTAATGTGGGTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
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| CDS CAA 90 bp | GGTGTGTATAATAAATTGTTCAGTCCATCGATGTACTGCCGCTCCTaGGAATACCGAAGTAATTTATACCGTCCTAGGAACTGTACCTCC | + |
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Preference number: 6 (lower is better) Translates to: GVYNKLFSPSMYCRS*EYRSNLYRPRNCTS Trigger: GGAGGTACAGTTCCTAGGACGGTATAAATTACTTCGGTATTCCAAGGAGCGGCAGTACATCGATGGACTGAACAATTTATTATACACACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
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| CDS CCA 72 bp | ATAAATTGTTCAGTCCATCGATGTACTGCCGCTCCTTaGAATACCGAAGTAATTTATACCGTCCTAGGAACT | + |
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Preference number: 6 (lower is better) Translates to: INCSVHRCTAAP*NTEVIYTVLGT Trigger: AGTTCCTAGGACGGTATAAATTACTTCGGTATTCCAAGGAGCGGCAGTACATCGATGGACTGAACAATTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
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| CDS CAA 72 bp | AATAAATTGTTCAGTCCATCGATGTACTGCCGCTCCTaGGAATACCGAAGTAATTTATACCGTCCTAGGAAC | + |
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Preference number: 6 (lower is better) Translates to: NKLFSPSMYCRS*EYRSNLYRPRN Trigger: GTTCCTAGGACGGTATAAATTACTTCGGTATTCCAAGGAGCGGCAGTACATCGATGGACTGAACAATTTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
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| CDS CAA 72 bp | AGCCTATCAACCAGTATTTTGGGTGTGTATAATAAATaGTTCAGTCCATCGATGTACTGCCGCTCCTTGGAA | + |
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Preference number: 6 (lower is better) Translates to: SLSTSILGVYNK*FSPSMYCRSLE Trigger: TTCCAAGGAGCGGCAGTACATCGATGGACTGAACAATTTATTATACACACCCAAAATACTGGTTGATAGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
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| CDS CAA 90 bp | TTTGTATACAGCCTATCAACCAGTATTTTGGGTGTGTATAATAAATaGTTCAGTCCATCGATGTACTGCCGCTCCTTGGAATACCGAAGT | + |
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Preference number: 6 (lower is better) Translates to: FVYSLSTSILGVYNK*FSPSMYCRSLEYRS Trigger: ACTTCGGTATTCCAAGGAGCGGCAGTACATCGATGGACTGAACAATTTATTATACACACCCAAAATACTGGTTGATAGGCTGTATACAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
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| CDS GCA 72 bp | GGTGTGTATAATAAATTGTTCAGTCCATCGATGTACTaGCGCTCCTTGGAATACCGAAGTAATTTATACCGT | + |
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Preference number: 6 (lower is better) Translates to: GVYNKLFSPSMY*RSLEYRSNLYR Trigger: ACGGTATAAATTACTTCGGTATTCCAAGGAGCGGCAGTACATCGATGGACTGAACAATTTATTATACACACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
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| CDS CAA 90 bp | GAGGTGTGGCAAATACGTGAAGTTTTGCGGAAGATACGTTGTTGTTaGAACAAGATAGTCACTTGTATTATTGCCTTCAGGATAATCTGT | + |
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Preference number: 6 (lower is better) Translates to: EVWQIREVLRKIRCC*NKIVTCIIAFRIIC Trigger: ACAGATTATCCTGAAGGCAATAATACAAGTGACTATCTTGTTCAAACAACAACGTATCTTCCGCAAAACTTCACGTATTTGCCACACCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
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| CDS CAA 72 bp | CAAATACGTGAAGTTTTGCGGAAGATACGTTGTTGTTaGAACAAGATAGTCACTTGTATTATTGCCTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: QIREVLRKIRCC*NKIVTCIIAFR Trigger: CCTGAAGGCAATAATACAAGTGACTATCTTGTTCAAACAACAACGTATCTTCCGCAAAACTTCACGTATTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
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| CDS CAA 90 bp | ATGAGGTTTACAGATATATTTGTATACAGCCTATCAACCAGTATTTaGGGTGTGTATAATAAATTGTTCAGTCCATCGATGTACTGCCGC | + |
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Preference number: 6 (lower is better) Translates to: MRFTDIFVYSLSTSI*GVYNKLFSPSMYCR Trigger: GCGGCAGTACATCGATGGACTGAACAATTTATTATACACACCCAAAATACTGGTTGATAGGCTGTATACAAATATATCTGTAAACCTCAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070080.6 |
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