Pregenerated sensors for B4GALT5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000017929Ensembl transcript IDs: ENSMUST00000109221.9, ENSMUST00000149698.2
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGAGGCGGAGGGAGGGTGGAGACCGGGCGGAACCCAGGCTTTATTaGTGTGTGTACCGTAAGACAAGGCAGGTCAACGCAGCGGTGCAG | + |
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Preference number: 1 (lower is better) Translates to: GRRREGGDRAEPRLY*CVYRKTRQVNAAVQ Trigger: CTGCACCGCTGCGTTGACCTGCCTTGTCTTACGGTACACACAGCAATAAAGCCTGGGTTCCGCCCGGTCTCCACCCTCCCTCCGCCTCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| 3UTR CCA 90 bp | GTCTCTAGCTCCCGCCATCCATACTGGAGTGATAAGCCTGTGCCCTaGGCCTTTGCCTCCCCTCCCCTGCACATCCCAGCTGGCTCCGCT | + |
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Preference number: 1 (lower is better) Translates to: VSSSRHPYWSDKPVP*AFASPPLHIPAGSA Trigger: AGCGGAGCCAGCTGGGATGTGCAGGGGAGGGGAGGCAAAGGCCCAGGGCACAGGCTTATCACTCCAGTATGGATGGCGGGAGCTAGAGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| 3UTR TCA 90 bp | GGCAGGTCAACGCAGCGGTGCAGCTCCTTGCCCAGCGCAAACAGATaGCGCGGCTCACCAGCTCTCAAGGGCAGACACCTGCTCTCTCAT | + |
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Preference number: 1 (lower is better) Translates to: GRSTQRCSSLPSANR*RGSPALKGRHLLSH Trigger: ATGAGAGAGCAGGTGTCTGCCCTTGAGAGCTGGTGAGCCGCGTCATCTGTTTGCGCTGGGCAAGGAGCTGCACCGCTGCGTTGACCTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| 3UTR GCA 90 bp | TCCTGGTCTCTAGCTCCCGCCATCCATACTGGAGTGATAAGCCTGTaGCCTGGGCCTTTGCCTCCCCTCCCCTGCACATCCCAGCTGGCT | + |
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Preference number: 1 (lower is better) Translates to: SWSLAPAIHTGVISL*PGPLPPLPCTSQLA Trigger: AGCCAGCTGGGATGTGCAGGGGAGGGGAGGCAAAGGCCCAGGGCACAGGCTTATCACTCCAGTATGGATGGCGGGAGCTAGAGACCAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| 3UTR TCA 90 bp | GTGGTGGGTACGTCAGTGTGTACGCCGCGGCTCTGTGCTGTCCTCTaGGGAAGGGAAGCGATGACAGAGTCCCCTGACAGAGTCCCCCAT | + |
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Preference number: 1 (lower is better) Translates to: VVGTSVCTPRLCAVL*GREAMTESPDRVPH Trigger: ATGGGGGACTCTGTCAGGGGACTCTGTCATCGCTTCCCTTCCTCAGAGGACAGCACAGAGCCGCGGCGTACACACTGACGTACCCACCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| 3UTR GCA 90 bp | AGAGCGTTCCTCACCACACACGATCCCTGCTTTAGGGACTGGGGGTaGAGTGGAGGCAGACACAGGAAGGAGGTGCCCTTTTCAGTGCCC | + |
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Preference number: 1 (lower is better) Translates to: RAFLTTHDPCFRDWG*SGGRHRKEVPFSVP Trigger: GGGCACTGAAAAGGGCACCTCCTTCCTGTGTCTGCCTCCACTGCACCCCCAGTCCCTAAAGCAGGGATCGTGTGTGGTGAGGAACGCTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| 3UTR TCA 90 bp | GACGCGGCTCACCAGCTCTCAAGGGCAGACACCTGCTCTCTCATATaGGCGGGAAGCACTCTGCAGTGCCATCTGTTCCCTAGTTACCAC | + |
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Preference number: 1 (lower is better) Translates to: DAAHQLSRADTCSLI*AGSTLQCHLFPSYH Trigger: GTGGTAACTAGGGAACAGATGGCACTGCAGAGTGCTTCCCGCTCATATGAGAGAGCAGGTGTCTGCCCTTGAGAGCTGGTGAGCCGCGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| 3UTR TCA 90 bp | AGGGAGCTGGACTGTGCTACACAGCACAGGCTGACCTGGAACTTGTaGCACAGCTCACACTGGCCTCATATCTCCTGGTCTCTAGCTCCC | + |
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Preference number: 1 (lower is better) Translates to: RELDCATQHRLTWNL*HSSHWPHISWSLAP Trigger: GGGAGCTAGAGACCAGGAGATATGAGGCCAGTGTGAGCTGTGTCACAAGTTCCAGGTCAGCCTGTGCTGTGTAGCACAGTCCAGCTCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| 3UTR CCA 90 bp | GACACCAGTGCTGATGACAGGTGTCCTCAAGTCTCCTGTCCCTGTTaGGCCCTACAGCGAAGGCCTTTGTGCGTGTGCTCTGTGACAGTT | + |
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Preference number: 1 (lower is better) Translates to: DTSADDRCPQVSCPC*ALQRRPLCVCSVTV Trigger: AACTGTCACAGAGCACACGCACAAAGGCCTTCGCTGTAGGGCCCAACAGGGACAGGAGACTTGAGGACACCTGTCATCAGCACTGGTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| 3UTR CCA 90 bp | CCAGGATACATGCCGCGTGCACCGTTGTCCCTCCAAAGGACACCATaGCTCCAGCACAGTGAAGCACTCCTGGCCTTTGGTATGGAAACA | + |
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Preference number: 1 (lower is better) Translates to: PGYMPRAPLSLQRTP*LQHSEALLAFGMET Trigger: TGTTTCCATACCAAAGGCCAGGAGTGCTTCACTGTGCTGGAGCCATGGTGTCCTTTGGAGGGACAACGGTGCACGCGGCATGTATCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| 3UTR CCA 90 bp | GCCCTACAGCGAAGGCCTTTGTGCGTGTGCTCTGTGACAGTTTTCTaGAACCCCTATGGTCCTGTGCTCCACTCTCTTCTGTCCTCCTGT | + |
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Preference number: 1 (lower is better) Translates to: ALQRRPLCVCSVTVF*NPYGPVLHSLLSSC Trigger: ACAGGAGGACAGAAGAGAGTGGAGCACAGGACCATAGGGGTTCCAGAAAACTGTCACAGAGCACACGCACAAAGGCCTTCGCTGTAGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| 3UTR CCA 90 bp | TGTCCCTCCAAAGGACACCATGGCTCCAGCACAGTGAAGCACTCCTaGCCTTTGGTATGGAAACAGAAGAATGAGGGAGAGAGGGCTGGG | + |
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Preference number: 1 (lower is better) Translates to: CPSKGHHGSSTVKHS*PLVWKQKNEGERAG Trigger: CCCAGCCCTCTCTCCCTCATTCTTCTGTTTCCATACCAAAGGCCAGGAGTGCTTCACTGTGCTGGAGCCATGGTGTCCTTTGGAGGGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| 3UTR TCA 90 bp | CTACATCCCACCCCCACCCATGTAAACCATGAACATCAAGGGTGCTaGAGGCAAAGAGGCAAAGAGCTTGAGGCCAGAAGAGAGCGTTCC | + |
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Preference number: 1 (lower is better) Translates to: LHPTPTHVNHEHQGC*RQRGKELEARRERS Trigger: GGAACGCTCTCTTCTGGCCTCAAGCTCTTTGCCTCTTTGCCTTCAGCACCCTTGATGTTCATGGTTTACATGGGTGGGGGTGGGATGTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| 3UTR CCA 90 bp | AACAAAGAGCAAGCTCACAACAGAGACAGTAATGCTGGGCTAAGCTaGCTGCGTCAGTGCCTCAATCTGTTGGTGGTGGGTACGTCAGTG | + |
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Preference number: 1 (lower is better) Translates to: NKEQAHNRDSNAGLS*LRQCLNLLVVGTSV Trigger: CACTGACGTACCCACCACCAACAGATTGAGGCACTGACGCAGCCAGCTTAGCCCAGCATTACTGTCTCTGTTGTGAGCTTGCTCTTTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| 3UTR GCA 90 bp | TCTCAAGGGCAGACACCTGCTCTCTCATATGAGCGGGAAGCACTCTaGAGTGCCATCTGTTCCCTAGTTACCACACTAGTCTACAAAAAG | + |
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Preference number: 1 (lower is better) Translates to: SQGQTPALSYEREAL*SAICSLVTTLVYKK Trigger: CTTTTTGTAGACTAGTGTGGTAACTAGGGAACAGATGGCACTGCAGAGTGCTTCCCGCTCATATGAGAGAGCAGGTGTCTGCCCTTGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| 3UTR TCA 90 bp | AAGGCATTTTACATGGCTTATTTACAACTGCACTTCTTCAAGAAGTaGCTGTTATATGTCTATCACACCAAGTCCCTCCCCTCTGTCCTC | + |
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Preference number: 1 (lower is better) Translates to: KAFYMAYLQLHFFKK*LLYVYHTKSLPSVL Trigger: GAGGACAGAGGGGAGGGACTTGGTGTGATAGACATATAACAGTCACTTCTTGAAGAAGTGCAGTTGTAAATAAGCCATGTAAAATGCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| 3UTR CAA 90 bp | GCTCCCGCCATCCATACTGGAGTGATAAGCCTGTGCCCTGGGCCTTaGCCTCCCCTCCCCTGCACATCCCAGCTGGCTCCGCTGGGTCTG | + |
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Preference number: 2 (lower is better) Translates to: APAIHTGVISLCPGP*PPLPCTSQLAPLGL Trigger: CAGACCCAGCGGAGCCAGCTGGGATGTGCAGGGGAGGGGAGGCAAAGGCCCAGGGCACAGGCTTATCACTCCAGTATGGATGGCGGGAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| 3UTR CAA 90 bp | GGAACCCCTATGGTCCTGTGCTCCACTCTCTTCTGTCCTCCTGTGTaGACCCCCAGGATGGCGGGTCGCAGCCCGTCCAAGGGAGCGGTG | + |
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Preference number: 2 (lower is better) Translates to: GTPMVLCSTLFCPPV*TPRMAGRSPSKGAV Trigger: CACCGCTCCCTTGGACGGGCTGCGACCCGCCATCCTGGGGGTCAACACAGGAGGACAGAAGAGAGTGGAGCACAGGACCATAGGGGTTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109221.9 ENSMUST00000149698.2 |
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| 3UTR-3UTR TCA 90 bp | CTGTGCTCCACTCTCTTCTGTCCTCCTGTGTTGACCCCCAGGATGGCGGGTCGCGGAGCGGTGGGTAGGTaGGTGCGGCTTCTCTTCGCA | + |
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Preference number: 2 (lower is better) Translates to: LCSTLFCPPVLTPRMAGRGAVGR*VRLLFA Trigger: TGCGAAGAGAAGCCGCACTCACCTACCCACCGCTCC...GCGACCCGCCATCCTGGGGGTCAACACAGGAGGACAGAAGAGAGTGGAGCACAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109221.9 ENSMUST00000149698.2 |
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| 3UTR-3UTR CCA 90 bp | ACGGGCCTTCAGGCCAGGGGGCTTGGCCACCCATCTATCCAAGGGGCACCTAGCACGGACGGAAGGGAGTaGCAGGGCAGACATCTGTCT | + |
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Preference number: 2 (lower is better) Translates to: TGLQARGLGHPSIQGAPSTDGRE*QGRHLS Trigger: AGACAGATGTCTGCCCTGCCACTCCCTTCCGTCCGT...GCTAGGTGCCCCTTGGATAGATGGGTGGCCAAGCCCCCTGGCCTGAAGGCCCGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| 3UTR-3UTR GCA 90 bp | AGGGAGAGAGGGCTGGGCCGTGACTCAGTGGCAGAGCACTCGCCTAGCGTGGTGGAAGCCAGCTGGTCATaGAGGCACAGCCCAGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: RERGLGRDSVAEHSPSVVEASWS*RHSPEK Trigger: TTTCTCTGGGCTGTGCCTGCATGACCAGCTGGCTTC...CACCACGCTAGGCGAGTGCTCTGCCACTGAGTCACGGCCCAGCCCTCTCTCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| 3UTR-3UTR CCA 90 bp | GAGGCAAAGAGCTTGAGGCCAGAAGAGAGCGTTCCTCACCACACACGATCCCTGGGGCTGACTGGCCCCTaGCTGACATGCACCCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: EAKSLRPEESVPHHTRSLGLTGP*LTCTPG Trigger: CCCTGGGGTGCATGTCAGCCAGGGGCCAGTCAGCCC...CAGGGATCGTGTGTGGTGAGGAACGCTCTCTTCTGGCCTCAAGCTCTTTGCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| 3UTR-3UTR GCA 90 bp | GAGGCAAAGAGCTTGAGGCCAGAAGAGAGCGTTCCTCACCACACACGATCCCTGTTGCCTCCCCTCCCCTaGACATCCCAGCTGGCTCCG | + |
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Preference number: 2 (lower is better) Translates to: EAKSLRPEESVPHHTRSLLPPLP*TSQLAP Trigger: CGGAGCCAGCTGGGATGTGCAGGGGAGGGGAGGCAA...CAGGGATCGTGTGTGGTGAGGAACGCTCTCTTCTGGCCTCAAGCTCTTTGCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| 3UTR-3UTR CCA 90 bp | CCGCGTGCACCGTTGTCCCTCCAAAGGACACCATGGCTCCAGCACAGTGAAGCAGTCTCCTGTCCCTGTTaGGCCCTACAGCGAAGGCCT | + |
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Preference number: 2 (lower is better) Translates to: PRAPLSLQRTPWLQHSEAVSCPC*ALQRRP Trigger: AGGCCTTCGCTGTAGGGCCCAACAGGGACAGGAGAC...TGCTTCACTGTGCTGGAGCCATGGTGTCCTTTGGAGGGACAACGGTGCACGCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| 3UTR-3UTR CCA 90 bp | CCGCGTGCACCGTTGTCCCTCCAAAGGACACCATGGCTCCAGCACAGTGAAGCAGGACTGGGGGTGCAGTaGAGGCAGACACAGGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: PRAPLSLQRTPWLQHSEAGLGVQ*RQTQEG Trigger: TCCTTCCTGTGTCTGCCTCCACTGCACCCCCAGTCC...TGCTTCACTGTGCTGGAGCCATGGTGTCCTTTGGAGGGACAACGGTGCACGCGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| 3UTR-3UTR TCA 90 bp | GGCTCAGTGGTAGCTTTGGCTGTGACACTGCCCACTCGGTACGTGACTGGGTGGGAAGAGGGGCTACAGTaGCCGGAGGTTCTTTGTTCC | + |
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Preference number: 2 (lower is better) Translates to: GSVVALAVTLPTRYVTGWEEGLQ*PEVLCS Trigger: GGAACAAAGAACCTCCGGTCACTGTAGCCCCTCTTC...CCACCCAGTCACGTACCGAGTGGGCAGTGTCACAGCCAAAGCTACCACTGAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| 3UTR-3UTR TCA 90 bp | GAGGCAAAGAGCTTGAGGCCAGAAGAGAGCGTTCCTCACCACACACGATCCCTGCAGCCACTGTGTGTGTaGGGAGGTGTAGGGAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: EAKSLRPEESVPHHTRSLQPLCV*GGVGSW Trigger: CCAGCTCCCTACACCTCCTCACACACACAGTGGCTG...CAGGGATCGTGTGTGGTGAGGAACGCTCTCTTCTGGCCTCAAGCTCTTTGCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| 3UTR-3UTR TCA 90 bp | GGCTCAGTGGTAGCTTTGGCTGTGACACTGCCCACTCGGTACGTGACTGGGTGGAAGAGGCAAAGAGCTTaGGGCCAGAAGAGAGCGTTC | + |
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Preference number: 2 (lower is better) Translates to: GSVVALAVTLPTRYVTGWKRQRA*GQKRAF Trigger: GAACGCTCTCTTCTGGCCTCAAGCTCTTTGCCTCTT...CCACCCAGTCACGTACCGAGTGGGCAGTGTCACAGCCAAAGCTACCACTGAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| 3UTR CAA 90 bp | GGAGGGGCAGAGCAGAGAAGAGGGGCTACAGTGACCGGAGGTTCTTaGTTCCACCCTGCATCCACTTCCTTCCTAGATGACAGGGACTTG | + |
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Preference number: 2 (lower is better) Translates to: GGAEQRRGATVTGGS*FHPASTSFLDDRDL Trigger: CAAGTCCCTGTCATCTAGGAAGGAAGTGGATGCAGGGTGGAACAAAGAACCTCCGGTCACTGTAGCCCCTCTTCTCTGCTCTGCCCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| 3UTR-3UTR TCA 90 bp | TCTGTGACAGTTTTCTGGAACCCCTATGGTCCTGTGCTCCACTCTCTTCTGTCCGGAGCGGTGGGTAGGTaGGTGCGGCTTCTCTTCGCA | + |
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Preference number: 2 (lower is better) Translates to: SVTVFWNPYGPVLHSLLSGAVGR*VRLLFA Trigger: TGCGAAGAGAAGCCGCACTCACCTACCCACCGCTCC...GGACAGAAGAGAGTGGAGCACAGGACCATAGGGGTTCCAGAAAACTGTCACAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109221.9 ENSMUST00000149698.2 |
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| 3UTR-3UTR TCA 90 bp | ACACAAGGCAGGCAGTTGAGGAGGTCATCTAAGGGTCACTCGTCTGTAGCACTCTGTGCGTGTGCTCTGTaGCAGTTTTCTGGAACCCCT | + |
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Preference number: 2 (lower is better) Translates to: TQGRQLRRSSKGHSSVALCACAL*QFSGTP Trigger: AGGGGTTCCAGAAAACTGTCACAGAGCACACGCACA...GAGTGCTACAGACGAGTGACCCTTAGATGACCTCCTCAACTGCCTGCCTTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| 3UTR-3UTR GCA 90 bp | CTGCATTTTCCCTCTTCAATTAAGTATCAGCCTTTGGCTCAAAACAGTACCCTGGGCCCCTGGCTGACATaGACCCCAGGGCCACCTGCT | + |
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Preference number: 2 (lower is better) Translates to: LHFPSSIKYQPLAQNSTLGPWLT*TPGPPA Trigger: AGCAGGTGGCCCTGGGGTGCATGTCAGCCAGGGGCC...CAGGGTACTGTTTTGAGCCAAAGGCTGATACTTAATTGAAGAGGGAAAATGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| 3UTR-3UTR GCA 90 bp | ACACAAGGCAGGCAGTTGAGGAGGTCATCTAAGGGTCACTCGTCTGTAGCACTCAGGTGCCCTTTTCAGTaGCCTTTAGGAACTCATGTC | + |
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Preference number: 2 (lower is better) Translates to: TQGRQLRRSSKGHSSVALRCPFQ*PLGTHV Trigger: GACATGAGTTCCTAAAGGGCACTGAAAAGGGCACCT...GAGTGCTACAGACGAGTGACCCTTAGATGACCTCCTCAACTGCCTGCCTTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| 3UTR-3UTR CCA 90 bp | CAGTGCCCACAAAAGTCCACACTAAAAACAAACTTGGACATGATTGCAACAGGACAACTGCGTGGGAACTaGGGTGTTTGCCACCCAAGG | + |
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Preference number: 2 (lower is better) Translates to: QCPQKSTLKTNLDMIATGQLRGN*GVCHPR Trigger: CCTTGGGTGGCAAACACCCCAGTTCCCACGCAGTTG...TCCTGTTGCAATCATGTCCAAGTTTGTTTTTAGTGTGGACTTTTGTGGGCACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| 3UTR-3UTR GCA 90 bp | AGTGCCATCTGTTCCCTAGTTACCACACTAGTCTACAAAAAGAACAAAACACAAGGAGTGATAAGCCTGTaGCCTGGGCCTTTGCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: SAICSLVTTLVYKKNKTQGVISL*PGPLPP Trigger: GGGAGGCAAAGGCCCAGGGCACAGGCTTATCACTCC...TTGTGTTTTGTTCTTTTTGTAGACTAGTGTGGTAACTAGGGAACAGATGGCACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| 3UTR-3UTR GCA 90 bp | CAGTGCCCACAAAAGTCCACACTAAAAACAAACTTGGACATGATTGCAACAGGAACCCCTATGGTCCTGTaGTCCACTCTCTTCTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: QCPQKSTLKTNLDMIATGTPMVL*STLFCP Trigger: AGGACAGAAGAGAGTGGAGCACAGGACCATAGGGGT...TCCTGTTGCAATCATGTCCAAGTTTGTTTTTAGTGTGGACTTTTGTGGGCACTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| 3UTR-3UTR GCA 90 bp | CAGTGCCCACAAAAGTCCACACTAAAAACAAACTTGGACATGATTGCAACAGGAGTGATGACACTCAACTaGGTGGGAACTGGGGTGTTT | + |
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Preference number: 2 (lower is better) Translates to: QCPQKSTLKTNLDMIATGVMTLN*VGTGVF Trigger: AAACACCCCAGTTCCCACGCAGTTGAGTGTCATCAC...TCCTGTTGCAATCATGTCCAAGTTTGTTTTTAGTGTGGACTTTTGTGGGCACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| 3UTR-3UTR CCA 90 bp | AGTGCCATCTGTTCCCTAGTTACCACACTAGTCTACAAAAAGAACAAAACACAAATCACTGAAGCCAGCTaGTCATGCAGGCACAGCCCA | + |
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Preference number: 2 (lower is better) Translates to: SAICSLVTTLVYKKNKTQITEAS*SCRHSP Trigger: TGGGCTGTGCCTGCATGACCAGCTGGCTTCAGTGAT...TTGTGTTTTGTTCTTTTTGTAGACTAGTGTGGTAACTAGGGAACAGATGGCACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| 3UTR TCA 72 bp | ACGCAGCGGTGCAGCTCCTTGCCCAGCGCAAACAGATaGCGCGGCTCACCAGCTCTCAAGGGCAGACACCTG | + |
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Preference number: 3 (lower is better) Translates to: TQRCSSLPSANR*RGSPALKGRHL Trigger: CAGGTGTCTGCCCTTGAGAGCTGGTGAGCCGCGTCATCTGTTTGCGCTGGGCAAGGAGCTGCACCGCTGCGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| 3UTR GCA 72 bp | GAGCACTCGCCTAGCGTGGTGGGCCACGGGCTTCATTaGCAGCACTGTGAAACTAACCAAGGGAGGCGGAGG | + |
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Preference number: 3 (lower is better) Translates to: EHSPSVVGHGLH*QHCETNQGRRR Trigger: CCTCCGCCTCCCTTGGTTAGTTTCACAGTGCTGGCAATGAAGCCCGTGGCCCACCACGCTAGGCGAGTGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| 3UTR GCA 72 bp | GGCCAGAAGAGAGCGTTCCTCACCACACACGATCCCTaGTTTAGGGACTGGGGGTGCAGTGGAGGCAGACAC | + |
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Preference number: 3 (lower is better) Translates to: GQKRAFLTTHDP*FRDWGCSGGRH Trigger: GTGTCTGCCTCCACTGCACCCCCAGTCCCTAAAGCAGGGATCGTGTGTGGTGAGGAACGCTCTCTTCTGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| 3UTR TCA 72 bp | ACGTCAGTGTGTACGCCGCGGCTCTGTGCTGTCCTCTaGGGAAGGGAAGCGATGACAGAGTCCCCTGACAGA | + |
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Preference number: 3 (lower is better) Translates to: TSVCTPRLCAVL*GREAMTESPDR Trigger: TCTGTCAGGGGACTCTGTCATCGCTTCCCTTCCTCAGAGGACAGCACAGAGCCGCGGCGTACACACTGACGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| 3UTR CCA 72 bp | ATGCCGCGTGCACCGTTGTCCCTCCAAAGGACACCATaGCTCCAGCACAGTGAAGCACTCCTGGCCTTTGGT | + |
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Preference number: 3 (lower is better) Translates to: MPRAPLSLQRTP*LQHSEALLAFG Trigger: ACCAAAGGCCAGGAGTGCTTCACTGTGCTGGAGCCATGGTGTCCTTTGGAGGGACAACGGTGCACGCGGCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| 3UTR-3UTR CAA 90 bp | GAGGCAAAGAGCTTGAGGCCAGAAGAGAGCGTTCCTCACCACACACGATCCCTGTCCAGGAGGAAGTCCTaGGGGGAAGGGGCTAAAGGA | + |
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Preference number: 3 (lower is better) Translates to: EAKSLRPEESVPHHTRSLSRRKS*GEGAKG Trigger: TCCTTTAGCCCCTTCCCCCAAGGACTTCCTCCTGGA...CAGGGATCGTGTGTGGTGAGGAACGCTCTCTTCTGGCCTCAAGCTCTTTGCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| 3UTR TCA 72 bp | GGGCCCTACAGCGAAGGCCTTTGTGCGTGTGCTCTGTaGCAGTTTTCTGGAACCCCTATGGTCCTGTGCTCC | + |
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Preference number: 3 (lower is better) Translates to: GPYSEGLCACAL*QFSGTPMVLCS Trigger: GGAGCACAGGACCATAGGGGTTCCAGAAAACTGTCACAGAGCACACGCACAAAGGCCTTCGCTGTAGGGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| 3UTR-3UTR CAA 90 bp | GAGGCAAAGAGCTTGAGGCCAGAAGAGAGCGTTCCTCACCACACACGATCCCTGCTGCAGTTCTATGGGTaGCAGCTGAGACAGGACCTG | + |
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Preference number: 3 (lower is better) Translates to: EAKSLRPEESVPHHTRSLLQFYG*QLRQDL Trigger: CAGGTCCTGTCTCAGCTGCAACCCATAGAACTGCAG...CAGGGATCGTGTGTGGTGAGGAACGCTCTCTTCTGGCCTCAAGCTCTTTGCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| 3UTR TCA 72 bp | GAAGCACTCCTGGCCTTTGGTATGGAAACAGAAGAATaGGGGAGAGAGGGCTGGGCCGTGACTCAGTGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: EALLAFGMETEE*GREGWAVTQWQ Trigger: CTGCCACTGAGTCACGGCCCAGCCCTCTCTCCCTCATTCTTCTGTTTCCATACCAAAGGCCAGGAGTGCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
||
| 3UTR CCA 72 bp | TCATATCTCCTGGTCTCTAGCTCCCGCCATCCATACTaGAGTGATAAGCCTGTGCCCTGGGCCTTTGCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: SYLLVSSSRHPY*SDKPVPWAFAS Trigger: GGAGGCAAAGGCCCAGGGCACAGGCTTATCACTCCAGTATGGATGGCGGGAGCTAGAGACCAGGAGATATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
||
| 3UTR CCA 72 bp | TTGGCTGTGACACTGCCCACTCGGTACGTGACTGGGTaGCCAATGACAGACAGTGCCCACAAAAGTCCACAC | + |
|
Preference number: 3 (lower is better) Translates to: LAVTLPTRYVTG*PMTDSAHKSPH Trigger: GTGTGGACTTTTGTGGGCACTGTCTGTCATTGGCCACCCAGTCACGTACCGAGTGGGCAGTGTCACAGCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
||
| 3UTR GCA 72 bp | TCCTGTCCCTGTTGGGCCCTACAGCGAAGGCCTTTGTaGGTGTGCTCTGTGACAGTTTTCTGGAACCCCTAT | + |
|
Preference number: 3 (lower is better) Translates to: SCPCWALQRRPL*VCSVTVFWNPY Trigger: ATAGGGGTTCCAGAAAACTGTCACAGAGCACACGCACAAAGGCCTTCGCTGTAGGGCCCAACAGGGACAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
||
| 3UTR TCA 72 bp | GACTGTGCTACACAGCACAGGCTGACCTGGAACTTGTaGCACAGCTCACACTGGCCTCATATCTCCTGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: DCATQHRLTWNL*HSSHWPHISWS Trigger: AGACCAGGAGATATGAGGCCAGTGTGAGCTGTGTCACAAGTTCCAGGTCAGCCTGTGCTGTGTAGCACAGTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
||
| 3UTR GCA 72 bp | AGAGACAGTAATGCTGGGCTAAGCTGGCTGCGTCAGTaGCTCAATCTGTTGGTGGTGGGTACGTCAGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: RDSNAGLSWLRQ*LNLLVVGTSVC Trigger: ACACACTGACGTACCCACCACCAACAGATTGAGGCACTGACGCAGCCAGCTTAGCCCAGCATTACTGTCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
||
| 3UTR CCA 72 bp | CGAAGGCCTTTGTGCGTGTGCTCTGTGACAGTTTTCTaGAACCCCTATGGTCCTGTGCTCCACTCTCTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: RRPLCVCSVTVF*NPYGPVLHSLL Trigger: CAGAAGAGAGTGGAGCACAGGACCATAGGGGTTCCAGAAAACTGTCACAGAGCACACGCACAAAGGCCTTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
||
| 3UTR TCA 72 bp | ACATCAAGGGTGCTGAAGGCAAAGAGGCAAAGAGCTTaGGGCCAGAAGAGAGCGTTCCTCACCACACACGAT | + |
|
Preference number: 3 (lower is better) Translates to: TSRVLKAKRQRA*GQKRAFLTTHD Trigger: ATCGTGTGTGGTGAGGAACGCTCTCTTCTGGCCTCAAGCTCTTTGCCTCTTTGCCTTCAGCACCCTTGATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
||
| 3UTR TCA 72 bp | ACCCCCACCCATGTAAACCATGAACATCAAGGGTGCTaGAGGCAAAGAGGCAAAGAGCTTGAGGCCAGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: TPTHVNHEHQGC*RQRGKELEARR Trigger: TCTTCTGGCCTCAAGCTCTTTGCCTCTTTGCCTTCAGCACCCTTGATGTTCATGGTTTACATGGGTGGGGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
||
| 3UTR TCA 72 bp | CACATATCTACATCCCACCCCCACCCATGTAAACCATaGACATCAAGGGTGCTGAAGGCAAAGAGGCAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: HISTSHPHPCKP*TSRVLKAKRQR Trigger: TCTTTGCCTCTTTGCCTTCAGCACCCTTGATGTTCATGGTTTACATGGGTGGGGGTGGGATGTAGATATGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
||
| 3UTR-3UTR CAA 90 bp | ACACAAGGCAGGCAGTTGAGGAGGTCATCTAAGGGTCACTCGTCTGTAGCACTCACACTAAAAACAAACTaGGACATGATTGCAACAGGA | + |
|
Preference number: 3 (lower is better) Translates to: TQGRQLRRSSKGHSSVALTLKTN*DMIATG Trigger: TCCTGTTGCAATCATGTCCAAGTTTGTTTTTAGTGT...GAGTGCTACAGACGAGTGACCCTTAGATGACCTCCTCAACTGCCTGCCTTGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
||
| 3UTR-3UTR CAA 90 bp | CAGTGCCCACAAAAGTCCACACTAAAAACAAACTTGGACATGATTGCAACAGGAATTAAGTATCAGCCTTaGGCTCAAAACAGTACCCTG | + |
|
Preference number: 3 (lower is better) Translates to: QCPQKSTLKTNLDMIATGIKYQP*AQNSTL Trigger: CAGGGTACTGTTTTGAGCCAAAGGCTGATACTTAAT...TCCTGTTGCAATCATGTCCAAGTTTGTTTTTAGTGTGGACTTTTGTGGGCACTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
||
| 3UTR CAA 72 bp | GTAGAGATGCAGAGACGGGCCTTCAGGCCAGGGGGCTaGGCCACCCATCTATCCAAGGGGCACCTAGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VEMQRRAFRPGG*ATHLSKGHLAW Trigger: CCAGGCTAGGTGCCCCTTGGATAGATGGGTGGCCAAGCCCCCTGGCCTGAAGGCCCGTCTCTGCATCTCTAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
||
| CDS-3UTR TCA 90 bp | AGGGAGAGAGGGCTGGGCCGTGACTCAGTGGCAGAGCACTCGCCTAGCGTGGTGCAGTACTCAGTCACCTaGGCCAGCTCGGGTGTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: RERGLGRDSVAEHSPSVVQYSVT*ASSGVK Trigger: CTTGACACCCGAGCTGGCTCAGGTGACTGAGTACTG...CACCACGCTAGGCGAGTGCTCTGCCACTGAGTCACGGCCCAGCCCTCTCTCCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
||
| CDS-3UTR GCA 90 bp | ACGGGCCTTCAGGCCAGGGGGCTTGGCCACCCATCTATCCAAGGGGCACCTAGCAGCTTGGTTGCAAAGTaGCTGGGCATCTGCCCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TGLQARGLGHPSIQGAPSSLVAK*LGICPQ Trigger: CTGCGGGCAGATGCCCAGGCACTTTGCAACCAAGCT...GCTAGGTGCCCCTTGGATAGATGGGTGGCCAAGCCCCCTGGCCTGAAGGCCCGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
||
| CDS-3UTR GCA 90 bp | ACGGGCCTTCAGGCCAGGGGGCTTGGCCACCCATCTATCCAAGGGGCACCTAGCGGTAGGTGTTCACTATaGCGGGCGCCACATAGACGA | + |
|
Preference number: 4 (lower is better) Translates to: TGLQARGLGHPSIQGAPSGRCSL*RAPHRR Trigger: TCGTCTATGTGGCGCCCGGCATAGTGAACACCTACC...GCTAGGTGCCCCTTGGATAGATGGGTGGCCAAGCCCCCTGGCCTGAAGGCCCGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
||
| 3UTR CAA 72 bp | ATGGTCCTGTGCTCCACTCTCTTCTGTCCTCCTGTGTaGACCCCCAGGATGGCGGGTCGCAGCCCGTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: MVLCSTLFCPPV*TPRMAGRSPSK Trigger: CTTGGACGGGCTGCGACCCGCCATCCTGGGGGTCAACACAGGAGGACAGAAGAGAGTGGAGCACAGGACCAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109221.9 ENSMUST00000149698.2 |
||
| CDS-3UTR CCA 90 bp | GGCTCAGTGGTAGCTTTGGCTGTGACACTGCCCACTCGGTACGTGACTGGGTGGGGCTGCTGTTCCTCTTaGCATAGGCGCTGCGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: GSVVALAVTLPTRYVTGWGCCSS*HRRCGP Trigger: TGGTCCGCAGCGCCTATGCCAAGAGGAACAGCAGCC...CCACCCAGTCACGTACCGAGTGGGCAGTGTCACAGCCAAAGCTACCACTGAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
||
| CDS-3UTR GCA 90 bp | CCGCGTGCACCGTTGTCCCTCCAAAGGACACCATGGCTCCAGCACAGTGAAGCATCTGCAGGCTTCCAGTaGCCTCCGAGCTTAATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PRAPLSLQRTPWLQHSEASAGFQ*PPSLMA Trigger: GGCCATTAAGCTCGGAGGGCACTGGAAGCCTGCAGA...TGCTTCACTGTGCTGGAGCCATGGTGTCCTTTGGAGGGACAACGGTGCACGCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
||
| CDS-3UTR GCA 90 bp | CTGTGCTCCACTCTCTTCTGTCCTCCTGTGTTGACCCCCAGGATGGCGGGTCGCAGGCCATCCAGTCCTTaGCGCTCCTTTGACTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LCSTLFCPPVLTPRMAGRRPSSP*RSFDFL Trigger: GAGGAAGTCAAAGGAGCGGCAAGGACTGGATGGCCT...GCGACCCGCCATCCTGGGGGTCAACACAGGAGGACAGAAGAGAGTGGAGCACAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109221.9 ENSMUST00000149698.2 |
||
| CDS-3UTR CCA 90 bp | AGTCTCCTGTCCCTGTTGGGCCCTACAGCGAAGGCCTTTGTGCGTGTGCTCTGTGCTGGCGCTGAAGCATaGGGAGCAGGTGTCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLLSLLGPTAKAFVRVLCAGAEA*GAGVSG Trigger: TCCTGAGACACCTGCTCCCCATGCTTCAGCGCCAGC...ACAGAGCACACGCACAAAGGCCTTCGCTGTAGGGCCCAACAGGGACAGGAGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
||
| CDS-3UTR GCA 90 bp | CTGTGCTCCACTCTCTTCTGTCCTCCTGTGTTGACCCCCAGGATGGCGGGTCGCTCAGCAGAGCGTACCTaGCAAGAAACTGGACCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LCSTLFCPPVLTPRMAGRSAERT*QETGPL Trigger: GAGAGGTCCAGTTTCTTGGCAGGTACGCTCTGCTGA...GCGACCCGCCATCCTGGGGGTCAACACAGGAGGACAGAAGAGAGTGGAGCACAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109221.9 ENSMUST00000149698.2 |
||
| CDS-3UTR CCA 90 bp | CTGTGCTCCACTCTCTTCTGTCCTCCTGTGTTGACCCCCAGGATGGCGGGTCGCTACCTGCCAAGAAACTaGACCTCTCCTCGATGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LCSTLFCPPVLTPRMAGRYLPRN*TSPRWW Trigger: CCACCATCGAGGAGAGGTCCAGTTTCTTGGCAGGTA...GCGACCCGCCATCCTGGGGGTCAACACAGGAGGACAGAAGAGAGTGGAGCACAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109221.9 ENSMUST00000149698.2 |
||
| 3UTR CAA 72 bp | GTCTCCTGTCCCTGTTGGGCCCTACAGCGAAGGCCTTaGTGCGTGTGCTCTGTGACAGTTTTCTGGAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: VSCPCWALQRRP*CVCSVTVFWNP Trigger: GGGGTTCCAGAAAACTGTCACAGAGCACACGCACAAAGGCCTTCGCTGTAGGGCCCAACAGGGACAGGAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
||
| CDS-3UTR GCA 90 bp | TGGCAGGGCAGACATCTGTCTTGTGGAATAGACACCAGTGCTGATGACAGGTGTAGGAGGACCGGGAGGTaGTCATGGCGGTTCCGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: WQGRHLSCGIDTSADDRCRRTGR*SWRFRK Trigger: CTTCCGGAACCGCCATGAGCACCTCCCGGTCCTCCT...ACACCTGTCATCAGCACTGGTGTCTATTCCACAAGACAGATGTCTGCCCTGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
||
| CDS-3UTR CCA 90 bp | AGGAGGTGCCCTTTTCAGTGCCCTTTAGGAACTCATGTCAGGGAGCAGGGGAGAGGAAGGGAGCCTCTCTaGGCAAGGGTGGTTGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RRCPFQCPLGTHVREQGRGREPL*ARVVGK Trigger: TTTGCCAACCACCCTTGCCCAGAGAGGCTCCCTTCC...TCTCCCCTGCTCCCTGACATGAGTTCCTAAAGGGCACTGAAAAGGGCACCTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
||
| CDS-3UTR CCA 90 bp | AGTCTCCTGTCCCTGTTGGGCCCTACAGCGAAGGCCTTTGTGCGTGTGCTCTGTTACCTGCCAAGAAACTaGACCTCTCCTCGATGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLLSLLGPTAKAFVRVLCYLPRN*TSPRWW Trigger: CCACCATCGAGGAGAGGTCCAGTTTCTTGGCAGGTA...ACAGAGCACACGCACAAAGGCCTTCGCTGTAGGGCCCAACAGGGACAGGAGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
||
| 3UTR CAA 72 bp | CACCCTGCATCCACTTCCTTCCTAGATGACAGGGACTaGGGTGATGACACTCAACTGCGTGGGAACTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: HPASTSFLDDRD*GDDTQLRGNWG Trigger: ACCCCAGTTCCCACGCAGTTGAGTGTCATCACCCAAGTCCCTGTCATCTAGGAAGGAAGTGGATGCAGGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
||
| CDS-3UTR TCA 90 bp | TCTGTGACAGTTTTCTGGAACCCCTATGGTCCTGTGCTCCACTCTCTTCTGTCCCAGTACTCAGTCACCTaGGCCAGCTCGGGTGTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SVTVFWNPYGPVLHSLLSQYSVT*ASSGVK Trigger: CTTGACACCCGAGCTGGCTCAGGTGACTGAGTACTG...GGACAGAAGAGAGTGGAGCACAGGACCATAGGGGTTCCAGAAAACTGTCACAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109221.9 ENSMUST00000149698.2 |
||
| CDS-3UTR GCA 90 bp | CTGTGCTCCACTCTCTTCTGTCCTCCTGTGTTGACCCCCAGGATGGCGGGTCGCGCTCACAGAATAGCCTaGATTTTGTACCAGGTACAT | + |
|
Preference number: 4 (lower is better) Translates to: LCSTLFCPPVLTPRMAGRAHRIA*ILYQVH Trigger: ATGTACCTGGTACAAAATGCAGGCTATTCTGTGAGC...GCGACCCGCCATCCTGGGGGTCAACACAGGAGGACAGAAGAGAGTGGAGCACAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149698.2 |
||
| CDS-3UTR TCA 90 bp | TCTGTGACAGTTTTCTGGAACCCCTATGGTCCTGTGCTCCACTCTCTTCTGTCCTCCTTGCCGCTCCTTTaGCTTCCTCAGCAGAGCGTA | + |
|
Preference number: 4 (lower is better) Translates to: SVTVFWNPYGPVLHSLLSSLPLL*LPQQSV Trigger: TACGCTCTGCTGAGGAAGTCAAAGGAGCGGCAAGGA...GGACAGAAGAGAGTGGAGCACAGGACCATAGGGGTTCCAGAAAACTGTCACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109221.9 ENSMUST00000149698.2 |
||
| CDS-3UTR GCA 90 bp | AGTCTCCTGTCCCTGTTGGGCCCTACAGCGAAGGCCTTTGTGCGTGTGCTCTGTGCTCACAGAATAGCCTaGATTTTGTACCCTGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLLSLLGPTAKAFVRVLCAHRIA*ILYPVP Trigger: TGGAACAGGGTACAAAATGCAGGCTATTCTGTGAGC...ACAGAGCACACGCACAAAGGCCTTCGCTGTAGGGCCCAACAGGGACAGGAGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
||
| CDS-3UTR GCA 90 bp | TCTGTGACAGTTTTCTGGAACCCCTATGGTCCTGTGCTCCACTCTCTTCTGTCCAGGCCATCCAGTCCTTaGCGCTCCTTTGACTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SVTVFWNPYGPVLHSLLSRPSSP*RSFDFL Trigger: GAGGAAGTCAAAGGAGCGGCAAGGACTGGATGGCCT...GGACAGAAGAGAGTGGAGCACAGGACCATAGGGGTTCCAGAAAACTGTCACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109221.9 ENSMUST00000149698.2 |
||
| 3UTR CAA 72 bp | AACATCAAGGGTGCTGAAGGCAAAGAGGCAAAGAGCTaGAGGCCAGAAGAGAGCGTTCCTCACCACACACGA | + |
|
Preference number: 4 (lower is better) Translates to: NIKGAEGKEAKS*RPEESVPHHTR Trigger: TCGTGTGTGGTGAGGAACGCTCTCTTCTGGCCTCAAGCTCTTTGCCTCTTTGCCTTCAGCACCCTTGATGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
||
| 3UTR CAA 72 bp | TTTGGCTCAAAACAGTACCCTGTGGCTAGTGTAAGATaGCAGCGCTTCAGCCAGGATACATGCCGCGTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: FGSKQYPVASVR*QRFSQDTCRVH Trigger: GTGCACGCGGCATGTATCCTGGCTGAAGCGCTGCAATCTTACACTAGCCACAGGGTACTGTTTTGAGCCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
||
| CDS-3UTR TCA 90 bp | TCTGTGACAGTTTTCTGGAACCCCTATGGTCCTGTGCTCCACTCTCTTCTGTCCAGTAGTTCAGGTTGTTaGGGCCATCCAGTCCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SVTVFWNPYGPVLHSLLSSSSGC*GHPVLA Trigger: GGCAAGGACTGGATGGCCTCAACAACCTGAACTACT...GGACAGAAGAGAGTGGAGCACAGGACCATAGGGGTTCCAGAAAACTGTCACAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109221.9 ENSMUST00000149698.2 |
||
| CDS-3UTR TCA 90 bp | CCGCGTGCACCGTTGTCCCTCCAAAGGACACCATGGCTCCAGCACAGTGAAGCAGCTCGGGTGTCAAGTTaGCAGTTATGTTTTTATACA | + |
|
Preference number: 4 (lower is better) Translates to: PRAPLSLQRTPWLQHSEAARVSS*QLCFYT Trigger: TGTATAAAAACATAACTGTCAACTTGACACCCGAGC...TGCTTCACTGTGCTGGAGCCATGGTGTCCTTTGGAGGGACAACGGTGCACGCGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
||
| CDS-3UTR CCA 90 bp | CTGCATTTTCCCTCTTCAATTAAGTATCAGCCTTTGGCTCAAAACAGTACCCTGACCGGGAGGTGCTCATaGCGGTTCCGGAAGGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: LHFPSSIKYQPLAQNSTLTGRCS*RFRKGM Trigger: CATCCCCTTCCGGAACCGCCATGAGCACCTCCCGGT...CAGGGTACTGTTTTGAGCCAAAGGCTGATACTTAATTGAAGAGGGAAAATGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
||
| CDS-3UTR TCA 90 bp | CAGTGCCCACAAAAGTCCACACTAAAAACAAACTTGGACATGATTGCAACAGGATCCTTGCCGCTCCTTTaGCTTCCTCAGCAGAGCGTA | + |
|
Preference number: 4 (lower is better) Translates to: QCPQKSTLKTNLDMIATGSLPLL*LPQQSV Trigger: TACGCTCTGCTGAGGAAGTCAAAGGAGCGGCAAGGA...TCCTGTTGCAATCATGTCCAAGTTTGTTTTTAGTGTGGACTTTTGTGGGCACTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
||
| CDS-3UTR CCA 90 bp | AGTGCCATCTGTTCCCTAGTTACCACACTAGTCTACAAAAAGAACAAAACACAACTATCGGGCCCTTCATaGAAGGGAGCCTCTCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SAICSLVTTLVYKKNKTQLSGPS*KGASLG Trigger: GCCCAGAGAGGCTCCCTTCCATGAAGGGCCCGATAG...TTGTGTTTTGTTCTTTTTGTAGACTAGTGTGGTAACTAGGGAACAGATGGCACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
||
| CDS-3UTR TCA 90 bp | TCTGTGACAGTTTTCTGGAACCCCTATGGTCCTGTGCTCCACTCTCTTCTGTCCGCTCGGGTGTCAAGTTaGCAGTTATGTTTTTATACA | + |
|
Preference number: 4 (lower is better) Translates to: SVTVFWNPYGPVLHSLLSARVSS*QLCFYT Trigger: TGTATAAAAACATAACTGTCAACTTGACACCCGAGC...GGACAGAAGAGAGTGGAGCACAGGACCATAGGGGTTCCAGAAAACTGTCACAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000109221.9 ENSMUST00000149698.2 |
||
| CDS-3UTR GCA 90 bp | CTGCATTTTCCCTCTTCAATTAAGTATCAGCCTTTGGCTCAAAACAGTACCCTGTCAGCAGAGCGTACCTaGCAAGAAACTGGACCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LHFPSSIKYQPLAQNSTLSAERT*QETGPL Trigger: GAGAGGTCCAGTTTCTTGGCAGGTACGCTCTGCTGA...CAGGGTACTGTTTTGAGCCAAAGGCTGATACTTAATTGAAGAGGGAAAATGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
||
| CDS-3UTR TCA 90 bp | AGTGCCATCTGTTCCCTAGTTACCACACTAGTCTACAAAAAGAACAAAACACAACCTGAGCCTGCACCATaGAGAGGTAGGTGTTCACTA | + |
|
Preference number: 4 (lower is better) Translates to: SAICSLVTTLVYKKNKTQPEPAP*RGRCSL Trigger: TAGTGAACACCTACCTCTTCATGGTGCAGGCTCAGG...TTGTGTTTTGTTCTTTTTGTAGACTAGTGTGGTAACTAGGGAACAGATGGCACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
||
| CDS-3UTR GCA 90 bp | AGTGCCATCTGTTCCCTAGTTACCACACTAGTCTACAAAAAGAACAAAACACAACTGAGTCATTCAGGCTaGTGTTCCTCTTGGCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: SAICSLVTTLVYKKNKTQLSHSG*CSSWHR Trigger: CCTATGCCAAGAGGAACAGCAGCCTGAATGACTCAG...TTGTGTTTTGTTCTTTTTGTAGACTAGTGTGGTAACTAGGGAACAGATGGCACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
||
| CDS-3UTR TCA 90 bp | CTGCATTTTCCCTCTTCAATTAAGTATCAGCCTTTGGCTCAAAACAGTACCCTGTCCTTCATGGCTTCTTaGAAACCAACATTGAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LHFPSSIKYQPLAQNSTLSFMAS*KPTLKS Trigger: GCTTTTCAATGTTGGTTTTCAAGAAGCCATGAAGGA...CAGGGTACTGTTTTGAGCCAAAGGCTGATACTTAATTGAAGAGGGAAAATGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
||
| CDS CCA 90 bp | GCTCGATCACATAGAAGGCGAACTGCAGGCGCTGGCGCTGAAGCATaGGGAGCAGGTGTCTCAGGAGGACCGGGAGGTGCTCATGGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: ARSHRRRTAGAGAEA*GAGVSGGPGGAHGG Trigger: ACCGCCATGAGCACCTCCCGGTCCTCCTGAGACACCTGCTCCCCATGCTTCAGCGCCAGCGCCTGCAGTTCGCCTTCTATGTGATCGAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
||
| CDS GCA 90 bp | CCGGAAGGGGATGAGGATAGCCACCTTCCACCGAGGCACACAGTCTaGAGGCTTCCAGTGCCCTCCGAGCTTAATGGCCGGGTCTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: PEGDEDSHLPPRHTV*RLPVPSELNGRVSG Trigger: TCCAGAGACCCGGCCATTAAGCTCGGAGGGCACTGGAAGCCTGCAGACTGTGTGCCTCGGTGGAAGGTGGCTATCCTCATCCCCTTCCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
||
| CDS-3UTR CAA 90 bp | GTCTCTAGCTCCCGCCATCCATACTGGAGTGATAAGCCTGTGCCCTGGGCCTTTCCGATGGTCCTCACATaGTCCCGCAGTAGGATGCCC | + |
|
Preference number: 5 (lower is better) Translates to: VSSSRHPYWSDKPVPWAFPMVLT*SRSRMP Trigger: GGGCATCCTACTGCGGGACAATGTGAGGACCATCGG...AAAGGCCCAGGGCACAGGCTTATCACTCCAGTATGGATGGCGGGAGCTAGAGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| CDS-3UTR CAA 90 bp | CTGTGCTCCACTCTCTTCTGTCCTCCTGTGTTGACCCCCAGGATGGCGGGTCGCATGTACTTGTCCAGCTaGGTTGCAAAGTGCCTGGGC | + |
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Preference number: 5 (lower is better) Translates to: LCSTLFCPPVLTPRMAGRMYLSS*VAKCLG Trigger: GCCCAGGCACTTTGCAACCAAGCTGGACAAGTACAT...GCGACCCGCCATCCTGGGGGTCAACACAGGAGGACAGAAGAGAGTGGAGCACAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| CDS-3UTR CAA 90 bp | GGCTCAGTGGTAGCTTTGGCTGTGACACTGCCCACTCGGTACGTGACTGGGTGGACTTGTCCAGCTTGGTaGCAAAGTGCCTGGGCATCT | + |
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Preference number: 5 (lower is better) Translates to: GSVVALAVTLPTRYVTGWTCPAW*QSAWAS Trigger: AGATGCCCAGGCACTTTGCAACCAAGCTGGACAAGT...CCACCCAGTCACGTACCGAGTGGGCAGTGTCACAGCCAAAGCTACCACTGAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| CDS GCA 90 bp | GATAATCTGAGTCATTCAGGCTGCTGTTCCTCTTGGCATAGGCGCTaGGGACCACCTGCTCGTACACCTGGGCACCGATGGTCCTCACAT | + |
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Preference number: 5 (lower is better) Translates to: DNLSHSGCCSSWHRR*GPPARTPGHRWSSH Trigger: ATGTGAGGACCATCGGTGCCCAGGTGTACGAGCAGGTGGTCCGCAGCGCCTATGCCAAGAGGAACAGCAGCCTGAATGACTCAGATTATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| CDS-3UTR CAA 90 bp | GATGACAGGGACTTGGGTGATGACACTCAACTGCGTGGGAACTGGGGTGTTTGCGTCCTTGCCGCTCCTTaGACTTCCTCAGCAGAGCGT | + |
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Preference number: 5 (lower is better) Translates to: DDRDLGDDTQLRGNWGVCVLAAP*TSSAER Trigger: ACGCTCTGCTGAGGAAGTCAAAGGAGCGGCAAGGAC...GCAAACACCCCAGTTCCCACGCAGTTGAGTGTCATCACCCAAGTCCCTGTCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| CDS TCA 90 bp | AGAGTAGTTCAGGTTGTTGAGGCCATCCAGTCCTTGCCGCTCCTTTaGCTTCCTCAGCAGAGCGTACCTGCCAAGAAACTGGACCTCTCC | + |
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Preference number: 5 (lower is better) Translates to: RVVQVVEAIQSLPLL*LPQQSVPAKKLDLS Trigger: GGAGAGGTCCAGTTTCTTGGCAGGTACGCTCTGCTGAGGAAGTCAAAGGAGCGGCAAGGACTGGATGGCCTCAACAACCTGAACTACTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109221.9 ENSMUST00000149698.2 |
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| CDS CCA 90 bp | AGGGCAGCAGGTACATGTACTTGTCCAGCTTGGTTGCAAAGTGCCTaGGCATCTGCCCGCAGCCATAGTAGTTTCGGTCACTCTCAGGTA | + |
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Preference number: 5 (lower is better) Translates to: RAAGTCTCPAWLQSA*ASARSHSSFGHSQV Trigger: TACCTGAGAGTGACCGAAACTACTATGGCTGCGGGCAGATGCCCAGGCACTTTGCAACCAAGCTGGACAAGTACATGTACCTGCTGCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| CDS-3UTR CAA 90 bp | GATGACAGGGACTTGGGTGATGACACTCAACTGCGTGGGAACTGGGGTGTTTGCGAAGAAAGGTCGTGGTaGGGGGAAAGGCTTCACTGT | + |
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Preference number: 5 (lower is better) Translates to: DDRDLGDDTQLRGNWGVCEERSW*GERLHC Trigger: ACAGTGAAGCCTTTCCCCCAACCACGACCTTTCTTC...GCAAACACCCCAGTTCCCACGCAGTTGAGTGTCATCACCCAAGTCCCTGTCATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| CDS-3UTR CAA 90 bp | TCTGTGACAGTTTTCTGGAACCCCTATGGTCCTGTGCTCCACTCTCTTCTGTCCGTCCTTGCCGCTCCTTaGACTTCCTCAGCAGAGCGT | + |
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Preference number: 5 (lower is better) Translates to: SVTVFWNPYGPVLHSLLSVLAAP*TSSAER Trigger: ACGCTCTGCTGAGGAAGTCAAAGGAGCGGCAAGGAC...GGACAGAAGAGAGTGGAGCACAGGACCATAGGGGTTCCAGAAAACTGTCACAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109221.9 ENSMUST00000149698.2 |
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| CDS TCA 90 bp | TCATGGAAGGGAGCCTCTCTGGGCAAGGGTGGTTGGCAAAGTAGGTaGAATCTTCAGGAAGAAAGGTCGTGGTTGGGGGAAAGGCTTCAC | + |
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Preference number: 5 (lower is better) Translates to: SWKGASLGKGGWQSR*NLQEERSWLGERLH Trigger: GTGAAGCCTTTCCCCCAACCACGACCTTTCTTCCTGAAGATTTCACCTACTTTGCCAACCACCCTTGCCCAGAGAGGCTCCCTTCCATGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| CDS TCA 90 bp | CAGTGCCCTCCGAGCTTAATGGCCGGGTCTCTGGAGAACAGCTCATaGATATCGTCCATTGCGATCTCACTCATGTTTATATCTATCGGG | + |
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Preference number: 5 (lower is better) Translates to: QCPPSLMAGSLENSS*ISSIAISLMFISIG Trigger: CCCGATAGATATAAACATGAGTGAGATCGCAATGGACGATATTCATGAGCTGTTCTCCAGAGACCCGGCCATTAAGCTCGGAGGGCACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| CDS-3UTR CAA 90 bp | GATGACAGGGACTTGGGTGATGACACTCAACTGCGTGGGAACTGGGGTGTTTGCGTCCTTCATGGCTTCTaGAAAACCAACATTGAAAAG | + |
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Preference number: 5 (lower is better) Translates to: DDRDLGDDTQLRGNWGVCVLHGF*KTNIEK Trigger: CTTTTCAATGTTGGTTTTCAAGAAGCCATGAAGGAC...GCAAACACCCCAGTTCCCACGCAGTTGAGTGTCATCACCCAAGTCCCTGTCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| CDS GCA 90 bp | CTTAATGGCCGGGTCTCTGGAGAACAGCTCATGAATATCGTCCATTaGGATCTCACTCATGTTTATATCTATCGGGCCCTTCATGGAAGG | + |
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Preference number: 5 (lower is better) Translates to: LNGRVSGEQLMNIVH*DLTHVYIYRALHGR Trigger: CCTTCCATGAAGGGCCCGATAGATATAAACATGAGTGAGATCGCAATGGACGATATTCATGAGCTGTTCTCCAGAGACCCGGCCATTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| CDS-3UTR CAA 90 bp | TCTGTGACAGTTTTCTGGAACCCCTATGGTCCTGTGCTCCACTCTCTTCTGTCCAGCTCGGGTGTCAAGTaGACAGTTATGTTTTTATAC | + |
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Preference number: 5 (lower is better) Translates to: SVTVFWNPYGPVLHSLLSSSGVK*TVMFLY Trigger: GTATAAAAACATAACTGTCAACTTGACACCCGAGCT...GGACAGAAGAGAGTGGAGCACAGGACCATAGGGGTTCCAGAAAACTGTCACAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000109221.9 ENSMUST00000149698.2 |
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| CDS-3UTR CAA 90 bp | CAGTGCCCACAAAAGTCCACACTAAAAACAAACTTGGACATGATTGCAACAGGAAGCTCGGGTGTCAAGTaGACAGTTATGTTTTTATAC | + |
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Preference number: 5 (lower is better) Translates to: QCPQKSTLKTNLDMIATGSSGVK*TVMFLY Trigger: GTATAAAAACATAACTGTCAACTTGACACCCGAGCT...TCCTGTTGCAATCATGTCCAAGTTTGTTTTTAGTGTGGACTTTTGTGGGCACTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| CDS GCA 72 bp | AGCATGGGGAGCAGGTGTCTCAGGAGGACCGGGAGGTaGTCATGGCGGTTCCGGAAGGGGATGAGGATAGCC | + |
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Preference number: 6 (lower is better) Translates to: SMGSRCLRRTGR*SWRFRKGMRIA Trigger: GGCTATCCTCATCCCCTTCCGGAACCGCCATGAGCACCTCCCGGTCCTCCTGAGACACCTGCTCCCCATGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| CDS CCA 72 bp | CGCTGCGGACCACCTGCTCGTACACCTGGGCACCGATaGTCCTCACATTGTCCCGCAGTAGGATGCCCTGAG | + |
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Preference number: 6 (lower is better) Translates to: RCGPPARTPGHR*SSHCPAVGCPE Trigger: CTCAGGGCATCCTACTGCGGGACAATGTGAGGACCATCGGTGCCCAGGTGTACGAGCAGGTGGTCCGCAGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| CDS CCA 72 bp | GGGAGCAGGTGTCTCAGGAGGACCGGGAGGTGCTCATaGCGGTTCCGGAAGGGGATGAGGATAGCCACCTTC | + |
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Preference number: 6 (lower is better) Translates to: GSRCLRRTGRCS*RFRKGMRIATF Trigger: GAAGGTGGCTATCCTCATCCCCTTCCGGAACCGCCATGAGCACCTCCCGGTCCTCCTGAGACACCTGCTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| CDS CCA 72 bp | CATAGAAGGCGAACTGCAGGCGCTGGCGCTGAAGCATaGGGAGCAGGTGTCTCAGGAGGACCGGGAGGTGCT | + |
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Preference number: 6 (lower is better) Translates to: HRRRTAGAGAEA*GAGVSGGPGGA Trigger: AGCACCTCCCGGTCCTCCTGAGACACCTGCTCCCCATGCTTCAGCGCCAGCGCCTGCAGTTCGCCTTCTATG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| CDS GCA 72 bp | AGTCATTCAGGCTGCTGTTCCTCTTGGCATAGGCGCTaGGGACCACCTGCTCGTACACCTGGGCACCGATGG | + |
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Preference number: 6 (lower is better) Translates to: SHSGCCSSWHRR*GPPARTPGHRW Trigger: CCATCGGTGCCCAGGTGTACGAGCAGGTGGTCCGCAGCGCCTATGCCAAGAGGAACAGCAGCCTGAATGACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| CDS GCA 72 bp | ACCTTCCACCGAGGCACACAGTCTGCAGGCTTCCAGTaGCCTCCGAGCTTAATGGCCGGGTCTCTGGAGAAC | + |
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Preference number: 6 (lower is better) Translates to: TFHRGTQSAGFQ*PPSLMAGSLEN Trigger: GTTCTCCAGAGACCCGGCCATTAAGCTCGGAGGGCACTGGAAGCCTGCAGACTGTGTGCCTCGGTGGAAGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| CDS GCA 72 bp | GATGAGGATAGCCACCTTCCACCGAGGCACACAGTCTaGAGGCTTCCAGTGCCCTCCGAGCTTAATGGCCGG | + |
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Preference number: 6 (lower is better) Translates to: DEDSHLPPRHTV*RLPVPSELNGR Trigger: CCGGCCATTAAGCTCGGAGGGCACTGGAAGCCTGCAGACTGTGTGCCTCGGTGGAAGGTGGCTATCCTCATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| CDS TCA 72 bp | CATTGTCCCGCAGTAGGATGCCCTGAGCCTGCACCATaGAGAGGTAGGTGTTCACTATGCCGGGCGCCACAT | + |
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Preference number: 6 (lower is better) Translates to: HCPAVGCPEPAP*RGRCSLCRAPH Trigger: ATGTGGCGCCCGGCATAGTGAACACCTACCTCTTCATGGTGCAGGCTCAGGGCATCCTACTGCGGGACAATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| CDS CCA 72 bp | GAGGATAATCTGAGTCATTCAGGCTGCTGTTCCTCTTaGCATAGGCGCTGCGGACCACCTGCTCGTACACCT | + |
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Preference number: 6 (lower is better) Translates to: EDNLSHSGCCSS*HRRCGPPARTP Trigger: AGGTGTACGAGCAGGTGGTCCGCAGCGCCTATGCCAAGAGGAACAGCAGCCTGAATGACTCAGATTATCCTC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| CDS CAA 72 bp | GAAAAGCATGGCTCGGTTAAAGGGCTGGGTGCCAACTaGCTCGATCACATAGAAGGCGAACTGCAGGCGCTG | + |
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Preference number: 6 (lower is better) Translates to: EKHGSVKGLGAN*LDHIEGELQAL Trigger: CAGCGCCTGCAGTTCGCCTTCTATGTGATCGAGCAAGTTGGCACCCAGCCCTTTAACCGAGCCATGCTTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| CDS GCA 72 bp | GGTTCAAGTCCAGAGGATAATCTGAGTCATTCAGGCTaGTGTTCCTCTTGGCATAGGCGCTGCGGACCACCT | + |
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Preference number: 6 (lower is better) Translates to: GSSPEDNLSHSG*CSSWHRRCGPP Trigger: AGGTGGTCCGCAGCGCCTATGCCAAGAGGAACAGCAGCCTGAATGACTCAGATTATCCTCTGGACTTGAACC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| CDS CCA 72 bp | GGTACATGTACTTGTCCAGCTTGGTTGCAAAGTGCCTaGGCATCTGCCCGCAGCCATAGTAGTTTCGGTCAC | + |
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Preference number: 6 (lower is better) Translates to: GTCTCPAWLQSA*ASARSHSSFGH Trigger: GTGACCGAAACTACTATGGCTGCGGGCAGATGCCCAGGCACTTTGCAACCAAGCTGGACAAGTACATGTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| CDS CCA 72 bp | CGATCTCACTCATGTTTATATCTATCGGGCCCTTCATaGAAGGGAGCCTCTCTGGGCAAGGGTGGTTGGCAA | + |
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Preference number: 6 (lower is better) Translates to: RSHSCLYLSGPS*KGASLGKGGWQ Trigger: TTGCCAACCACCCTTGCCCAGAGAGGCTCCCTTCCATGAAGGGCCCGATAGATATAAACATGAGTGAGATCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| CDS CAA 72 bp | GTCCCCTTCTGGCCGGCTCACAGAATAGCCTGCATTTaGTACCAGGTACATGTACTTGTCCAGCTTGGTTGC | + |
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Preference number: 6 (lower is better) Translates to: VPFWPAHRIACI*YQVHVLVQLGC Trigger: GCAACCAAGCTGGACAAGTACATGTACCTGGTACAAAATGCAGGCTATTCTGTGAGCCGGCCAGAAGGGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149698.2 |
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| CDS CCA 72 bp | AAAGTAGGTGAAATCTTCAGGAAGAAAGGTCGTGGTTaGGGGAAAGGCTTCACTGTGGTTCAAGTCCAGAGG | + |
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Preference number: 6 (lower is better) Translates to: KVGEIFRKKGRG*GKGFTVVQVQR Trigger: CCTCTGGACTTGAACCACAGTGAAGCCTTTCCCCCAACCACGACCTTTCTTCCTGAAGATTTCACCTACTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| CDS CAA 72 bp | CCGGGTCTCTGGAGAACAGCTCATGAATATCGTCCATaGCGATCTCACTCATGTTTATATCTATCGGGCCCT | + |
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Preference number: 6 (lower is better) Translates to: PGLWRTAHEYRP*RSHSCLYLSGP Trigger: AGGGCCCGATAGATATAAACATGAGTGAGATCGCAATGGACGATATTCATGAGCTGTTCTCCAGAGACCCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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| CDS GCA 72 bp | CGGGTCTCTGGAGAACAGCTCATGAATATCGTCCATTaGGATCTCACTCATGTTTATATCTATCGGGCCCTT | + |
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Preference number: 6 (lower is better) Translates to: RVSGEQLMNIVH*DLTHVYIYRAL Trigger: AAGGGCCCGATAGATATAAACATGAGTGAGATCGCAATGGACGATATTCATGAGCTGTTCTCCAGAGACCCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109221.9 |
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