Pregenerated sensors for B4GALT3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052423Ensembl transcript IDs: ENSMUST00000064272.10, ENSMUST00000111313.10, ENSMUST00000126699.4, ENSMUST00000141114.3, ENSMUST00000141999.8
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GGGCCAAGACCAGAGGAGGAGCAGCCATTCCAGCACTCGCAGGAAATGCCCGGCATAAGCCCTGACAGGTaGCCCCTAGAAAGAGGAACC | + |
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Preference number: 2 (lower is better) Translates to: GPRPEEEQPFQHSQEMPGISPDR*PLERGT Trigger: GGTTCCTCTTTCTAGGGGTCACCTGTCAGGGCTTAT...GCCGGGCATTTCCTGCGAGTGCTGGAATGGCTGCTCCTCCTCTGGTCTTGGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 ENSMUST00000126699.4 |
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| 3UTR-3UTR TCA 90 bp | GGGCCAAGACCAGAGGAGGAGCAGCCATTCCAGCACTCGCAGGAAATGCCCGGCCACAGTCATAAGCCCTaGCAGGTGACCCCTAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: GPRPEEEQPFQHSQEMPGHSHKP*QVTPRK Trigger: CTTTCTAGGGGTCACCTGTCAGGGCTTATGACTGTG...GCCGGGCATTTCCTGCGAGTGCTGGAATGGCTGCTCCTCCTCTGGTCTTGGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 ENSMUST00000126699.4 |
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| CDS-3UTR GCA 90 bp | GGGCCAAGACCAGAGGAGGAGCAGCCATTCCAGCACTCGCAGGAAATGCCCGGCAGCCGGAGGAGCCCCTaGAGCTCCAGGGGCTGCGGG | + |
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Preference number: 4 (lower is better) Translates to: GPRPEEEQPFQHSQEMPGSRRSP*SSRGCG Trigger: CCCGCAGCCCCTGGAGCTGCAGGGGCTCCTCCGGCT...GCCGGGCATTTCCTGCGAGTGCTGGAATGGCTGCTCCTCCTCTGGTCTTGGCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 |
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| CDS-3UTR GCA 90 bp | CTAGAGGAGCCCAGCTCCAATCTAGCAGTGAGAAGAGGTCCCTGCCCCCTAGCAGCGAGGCTCACACCCTaGAGGACGGTACCGGCCCCC | + |
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Preference number: 4 (lower is better) Translates to: LEEPSSNLAVRRGPCPLAARLTP*RTVPAP Trigger: GGGGGCCGGTACCGTCCTGCAGGGTGTGAGCCTCGC...TGCTAGGGGGCAGGGACCTCTTCTCACTGCTAGATTGGAGCTGGGCTCCTCTAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 |
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| CDS-3UTR CCA 90 bp | GGGCCAAGACCAGAGGAGGAGCAGCCATTCCAGCACTCGCAGGAAATGCCCGGCCCGTACGCAAGCTGCTaGCGCTGCAGGAAAGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GPRPEEEQPFQHSQEMPGPYASC*RCRKGC Trigger: GCACCCTTTCCTGCAGCGCCAGCAGCTTGCGTACGG...GCCGGGCATTTCCTGCGAGTGCTGGAATGGCTGCTCCTCCTCTGGTCTTGGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 |
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| CDS-3UTR TCA 90 bp | CTAGAGGAGCCCAGCTCCAATCTAGCAGTGAGAAGAGGTCCCTGCCCCCTAGCAACGGTACCGGCCCCCTaGTTCCACCCGGGGATTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LEEPSSNLAVRRGPCPLATVPAP*FHPGIP Trigger: CGGAATCCCCGGGTGGAATCAGGGGGCCGGTACCGT...TGCTAGGGGGCAGGGACCTCTTCTCACTGCTAGATTGGAGCTGGGCTCCTCTAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 |
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| CDS-3UTR GCA 90 bp | GGGCCAAGACCAGAGGAGGAGCAGCCATTCCAGCACTCGCAGGAAATGCCCGGCTGGACAGTAGGGCAATaGTTGAGCCGGAGGAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: GPRPEEEQPFQHSQEMPGWTVGQ*LSRRSP Trigger: GGGGCTCCTCCGGCTCAAGCATTGCCCTACTGTCCA...GCCGGGCATTTCCTGCGAGTGCTGGAATGGCTGCTCCTCCTCTGGTCTTGGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 |
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| CDS-3UTR CCA 90 bp | GCCCAGCTCCAATCTAGCAGTGAGAAGAGGTCCCTGCCCCCTAGCACAGCACTAAGGGCCAGGCCTAGCTaGGGGCCGGCGTTGCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: AQLQSSSEKRSLPPSTALRARPS*GPALQH Trigger: ATGCTGCAACGCCGGCCCCCAGCTAGGCCTGGCCCT...TAGTGCTGTGCTAGGGGGCAGGGACCTCTTCTCACTGCTAGATTGGAGCTGGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 ENSMUST00000126699.4 |
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| CDS-3UTR GCA 90 bp | GAGGAACCTCCAGGTCTAGAGGAGCCCAGCTCCAATCTAGCAGTGAGAAGAGGTGCGAGGCTCACACCCTaGAGGACGGTACCGGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: EEPPGLEEPSSNLAVRRGARLTP*RTVPAP Trigger: GGGGGCCGGTACCGTCCTGCAGGGTGTGAGCCTCGC...ACCTCTTCTCACTGCTAGATTGGAGCTGGGCTCCTCTAGACCTGGAGGTTCCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 |
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| CDS-3UTR CCA 90 bp | CTAGAGGAGCCCAGCTCCAATCTAGCAGTGAGAAGAGGTCCCTGCCCCCTAGCAGGGGAGCTGTGTGGTTaGCAGTGGGCAGAGGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LEEPSSNLAVRRGPCPLAGELCG*QWAEGQ Trigger: CTGGCCCTCTGCCCACTGCCAACCACACAGCTCCCC...TGCTAGGGGGCAGGGACCTCTTCTCACTGCTAGATTGGAGCTGGGCTCCTCTAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 ENSMUST00000126699.4 |
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| CDS-3UTR CCA 90 bp | GCCCAGCTCCAATCTAGCAGTGAGAAGAGGTCCCTGCCCCCTAGCACAGCACTAGGGGAGCTGTGTGGTTaGCAGTGGGCAGAGGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: AQLQSSSEKRSLPPSTALGELCG*QWAEGQ Trigger: CTGGCCCTCTGCCCACTGCCAACCACACAGCTCCCC...TAGTGCTGTGCTAGGGGGCAGGGACCTCTTCTCACTGCTAGATTGGAGCTGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 ENSMUST00000126699.4 |
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| CDS-3UTR GCA 90 bp | GAGGAACCTCCAGGTCTAGAGGAGCCCAGCTCCAATCTAGCAGTGAGAAGAGGTAGCAGCCGAAGGTGGTaGTCCCGGGCACGATGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: EEPPGLEEPSSNLAVRRGSSRRW*SRARWG Trigger: GCCCCATCGTGCCCGGGAGCACCACCTTCGGCTGCT...ACCTCTTCTCACTGCTAGATTGGAGCTGGGCTCCTCTAGACCTGGAGGTTCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 |
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| CDS-3UTR CCA 90 bp | GGGCCAAGACCAGAGGAGGAGCAGCCATTCCAGCACTCGCAGGAAATGCCCGGCACTCCGCCAAAGTACTaGGGGTACGGGAGGCTGTAT | + |
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Preference number: 4 (lower is better) Translates to: GPRPEEEQPFQHSQEMPGTPPKY*GYGRLY Trigger: ATACAGCCTCCCGTACCCCCAGTACTTTGGCGGAGT...GCCGGGCATTTCCTGCGAGTGCTGGAATGGCTGCTCCTCCTCTGGTCTTGGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 ENSMUST00000126699.4 |
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| CDS-3UTR CCA 90 bp | GCCCAGCTCCAATCTAGCAGTGAGAAGAGGTCCCTGCCCCCTAGCACAGCACTACTGGGAGGAACCAGGTaGGTATCGGGGACCAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: AQLQSSSEKRSLPPSTALLGGTR*VSGTRG Trigger: CCCTCTGGTCCCCGATACCCACCTGGTTCCTCCCAG...TAGTGCTGTGCTAGGGGGCAGGGACCTCTTCTCACTGCTAGATTGGAGCTGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 ENSMUST00000126699.4 |
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| CDS-3UTR CCA 90 bp | GAGGAACCTCCAGGTCTAGAGGAGCCCAGCTCCAATCTAGCAGTGAGAAGAGGTAGGGCCAGGCCTAGCTaGGGGCCGGCGTTGCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: EEPPGLEEPSSNLAVRRGRARPS*GPALQH Trigger: ATGCTGCAACGCCGGCCCCCAGCTAGGCCTGGCCCT...ACCTCTTCTCACTGCTAGATTGGAGCTGGGCTCCTCTAGACCTGGAGGTTCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 ENSMUST00000126699.4 |
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| CDS-3UTR TCA 90 bp | CTAGAAAGAGGAACCTCCAGGTCTAGAGGAGCCCAGCTCCAATCTAGCAGTGAGACGGTACCGGCCCCCTaGTTCCACCCGGGGATTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LERGTSRSRGAQLQSSSETVPAP*FHPGIP Trigger: CGGAATCCCCGGGTGGAATCAGGGGGCCGGTACCGT...CTCACTGCTAGATTGGAGCTGGGCTCCTCTAGACCTGGAGGTTCCTCTTTCTAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 |
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| CDS-3UTR TCA 90 bp | GGGCCAAGACCAGAGGAGGAGCAGCCATTCCAGCACTCGCAGGAAATGCCCGGCTCCCGATGTCTGCGGTaGTGTTGGTATAGAGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GPRPEEEQPFQHSQEMPGSRCLR*CWYRED Trigger: GTCCTCTCTATACCAACATCACCGCAGACATCGGGA...GCCGGGCATTTCCTGCGAGTGCTGGAATGGCTGCTCCTCCTCTGGTCTTGGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 ENSMUST00000126699.4 |
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| CDS-3UTR CCA 90 bp | CCCTCCGGGGCCAAGACCAGAGGAGGAGCAGCCATTCCAGCACTCGCAGGAAATGATGGGGCACAATTATaGCTGTTCGGGAGCGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PSGAKTRGGAAIPALAGNDGAQL*LFGSEA Trigger: AGCCTCGCTCCCGAACAGCCATAATTGTGCCCCATC...ATTTCCTGCGAGTGCTGGAATGGCTGCTCCTCCTCTGGTCTTGGCCCCGGAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 |
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| CDS-3UTR CCA 90 bp | GAGGAACCTCCAGGTCTAGAGGAGCCCAGCTCCAATCTAGCAGTGAGAAGAGGTAGCAGCAGCCGAAGGTaGTGCTCCCGGGCACGATGG | + |
|
Preference number: 4 (lower is better) Translates to: EEPPGLEEPSSNLAVRRGSSSRR*CSRARW Trigger: CCATCGTGCCCGGGAGCACCACCTTCGGCTGCTGCT...ACCTCTTCTCACTGCTAGATTGGAGCTGGGCTCCTCTAGACCTGGAGGTTCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 |
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| CDS-3UTR TCA 90 bp | CCCTCCGGGGCCAAGACCAGAGGAGGAGCAGCCATTCCAGCACTCGCAGGAAATCTGCGGGCAGGTGACTaGGGTTACTATAGACATCGT | + |
|
Preference number: 4 (lower is better) Translates to: PSGAKTRGGAAIPALAGNLRAGD*GYYRHR Trigger: ACGATGTCTATAGTAACCTCAGTCACCTGCCCGCAG...ATTTCCTGCGAGTGCTGGAATGGCTGCTCCTCCTCTGGTCTTGGCCCCGGAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 |
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| CDS-3UTR TCA 90 bp | GCCCAGCTCCAATCTAGCAGTGAGAAGAGGTCCCTGCCCCCTAGCACAGCACTACGTTGCAGCATCTCTTaGCGGAAGGCCTGGGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: AQLQSSSEKRSLPPSTALRCSIS*RKAWEE Trigger: TTCCTCCCAGGCCTTCCGTCAAGAGATGCTGCAACG...TAGTGCTGTGCTAGGGGGCAGGGACCTCTTCTCACTGCTAGATTGGAGCTGGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 ENSMUST00000126699.4 |
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| CDS-3UTR CCA 90 bp | GCCCAGCTCCAATCTAGCAGTGAGAAGAGGTCCCTGCCCCCTAGCACAGCACTAATCATCACTGCCAGTTaGGAGCCCACAAGCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: AQLQSSSEKRSLPPSTALIITAS*EPTSRA Trigger: GGCCCTGCTTGTGGGCTCCCAACTGGCAGTGATGAT...TAGTGCTGTGCTAGGGGGCAGGGACCTCTTCTCACTGCTAGATTGGAGCTGGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 |
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| CDS-3UTR CCA 90 bp | CTAGAGGAGCCCAGCTCCAATCTAGCAGTGAGAAGAGGTCCCTGCCCCCTAGCAATCATCACTGCCAGTTaGGAGCCCACAAGCAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: LEEPSSNLAVRRGPCPLAIITAS*EPTSRA Trigger: GGCCCTGCTTGTGGGCTCCCAACTGGCAGTGATGAT...TGCTAGGGGGCAGGGACCTCTTCTCACTGCTAGATTGGAGCTGGGCTCCTCTAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 |
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| CDS-3UTR CCA 90 bp | GGGCCAAGACCAGAGGAGGAGCAGCCATTCCAGCACTCGCAGGAAATGCCCGGCATCCAAACTTGTTCATaGCAACAGCAACGTGGCGGG | + |
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Preference number: 4 (lower is better) Translates to: GPRPEEEQPFQHSQEMPGIQTCS*QQQRGG Trigger: CCCGCCACGTTGCTGTTGCCATGAACAAGTTTGGAT...GCCGGGCATTTCCTGCGAGTGCTGGAATGGCTGCTCCTCCTCTGGTCTTGGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 |
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| CDS-3UTR CCA 90 bp | GAGGAACCTCCAGGTCTAGAGGAGCCCAGCTCCAATCTAGCAGTGAGAAGAGGTCTGGGAGGAACCAGGTaGGTATCGGGGACCAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: EEPPGLEEPSSNLAVRRGLGGTR*VSGTRG Trigger: CCCTCTGGTCCCCGATACCCACCTGGTTCCTCCCAG...ACCTCTTCTCACTGCTAGATTGGAGCTGGGCTCCTCTAGACCTGGAGGTTCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 ENSMUST00000126699.4 |
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| CDS-3UTR GCA 90 bp | GAGGAACCTCCAGGTCTAGAGGAGCCCAGCTCCAATCTAGCAGTGAGAAGAGGTTGGACAGTAGGGCAATaGTTGAGCCGGAGGAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: EEPPGLEEPSSNLAVRRGWTVGQ*LSRRSP Trigger: GGGGCTCCTCCGGCTCAAGCATTGCCCTACTGTCCA...ACCTCTTCTCACTGCTAGATTGGAGCTGGGCTCCTCTAGACCTGGAGGTTCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 |
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| CDS-3UTR CCA 90 bp | GCCCAGCTCCAATCTAGCAGTGAGAAGAGGTCCCTGCCCCCTAGCACAGCACTAACTCCGCCAAAGTACTaGGGGTACGGGAGGCTGTAT | + |
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Preference number: 4 (lower is better) Translates to: AQLQSSSEKRSLPPSTALTPPKY*GYGRLY Trigger: ATACAGCCTCCCGTACCCCCAGTACTTTGGCGGAGT...TAGTGCTGTGCTAGGGGGCAGGGACCTCTTCTCACTGCTAGATTGGAGCTGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 ENSMUST00000126699.4 |
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| CDS-3UTR CCA 90 bp | CCCTCCGGGGCCAAGACCAGAGGAGGAGCAGCCATTCCAGCACTCGCAGGAAATTGTGTCCAAGAATTCTaGGTACGGACCAGGAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: PSGAKTRGGAAIPALAGNCVQEF*VRTRRS Trigger: TGACCTCCTGGTCCGTACCCAGAATTCTTGGACACA...ATTTCCTGCGAGTGCTGGAATGGCTGCTCCTCCTCTGGTCTTGGCCCCGGAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 ENSMUST00000126699.4 |
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| CDS-3UTR GCA 90 bp | GTGAGGAGCAGAGGTGTGAGGGACACAACCCCTCCAATTCAGTCTCATGATTACTGCAGCTCCAGGGGCTaGGGGCAGGTGACTGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: VRSRGVRDTTPPIQSHDYCSSRG*GQVTEV Trigger: AACCTCAGTCACCTGCCCGCAGCCCCTGGAGCTGCA...GTAATCATGAGACTGAATTGGAGGGGTTGTGTCCCTCACACCTCTGCTCCTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 |
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| CDS-3UTR CCA 90 bp | GTGAGGAGCAGAGGTGTGAGGGACACAACCCCTCCAATTCAGTCTCATGATTACCCGTACGCAAGCTGCTaGCGCTGCAGGAAAGGGTGC | + |
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Preference number: 4 (lower is better) Translates to: VRSRGVRDTTPPIQSHDYPYASC*RCRKGC Trigger: GCACCCTTTCCTGCAGCGCCAGCAGCTTGCGTACGG...GTAATCATGAGACTGAATTGGAGGGGTTGTGTCCCTCACACCTCTGCTCCTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 |
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| CDS-3UTR CCA 90 bp | CTAGAGGAGCCCAGCTCCAATCTAGCAGTGAGAAGAGGTCCCTGCCCCCTAGCAAGCCCCAGTACTCGTTaGGGAAGCCGTTCATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LEEPSSNLAVRRGPCPLASPSTR*GSRSSS Trigger: TGAAGATGAACGGCTTCCCCAACGAGTACTGGGGCT...TGCTAGGGGGCAGGGACCTCTTCTCACTGCTAGATTGGAGCTGGGCTCCTCTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 ENSMUST00000126699.4 |
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| CDS-3UTR CCA 90 bp | GTGAGGAGCAGAGGTGTGAGGGACACAACCCCTCCAATTCAGTCTCATGATTACCTGGGAGGAACCAGGTaGGTATCGGGGACCAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: VRSRGVRDTTPPIQSHDYLGGTR*VSGTRG Trigger: CCCTCTGGTCCCCGATACCCACCTGGTTCCTCCCAG...GTAATCATGAGACTGAATTGGAGGGGTTGTGTCCCTCACACCTCTGCTCCTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 ENSMUST00000126699.4 |
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| CDS-3UTR GCA 90 bp | GCCCAGCTCCAATCTAGCAGTGAGAAGAGGTCCCTGCCCCCTAGCACAGCACTACAGATACATCATCACTaGCAGTTGGGAGCCCACAAG | + |
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Preference number: 4 (lower is better) Translates to: AQLQSSSEKRSLPPSTALQIHHH*QLGAHK Trigger: CTTGTGGGCTCCCAACTGGCAGTGATGATGTATCTG...TAGTGCTGTGCTAGGGGGCAGGGACCTCTTCTCACTGCTAGATTGGAGCTGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 |
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| CDS-3UTR GCA 90 bp | GTGAGGAGCAGAGGTGTGAGGGACACAACCCCTCCAATTCAGTCTCATGATTACATGCCGTACGCAAGCTaGTGGCGCTGCAGGAAAGGG | + |
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Preference number: 4 (lower is better) Translates to: VRSRGVRDTTPPIQSHDYMPYAS*WRCRKG Trigger: CCCTTTCCTGCAGCGCCAGCAGCTTGCGTACGGCAT...GTAATCATGAGACTGAATTGGAGGGGTTGTGTCCCTCACACCTCTGCTCCTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 |
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| CDS-3UTR GCA 90 bp | GCCCAGCTCCAATCTAGCAGTGAGAAGAGGTCCCTGCCCCCTAGCACAGCACTAGTCAGTCCCGATGTCTaGGGTGATGTTGGTATAGAG | + |
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Preference number: 4 (lower is better) Translates to: AQLQSSSEKRSLPPSTALVSPDV*GDVGIE Trigger: CTCTATACCAACATCACCGCAGACATCGGGACTGAC...TAGTGCTGTGCTAGGGGGCAGGGACCTCTTCTCACTGCTAGATTGGAGCTGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 ENSMUST00000126699.4 |
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| CDS-3UTR CCA 90 bp | CCCTCCGGGGCCAAGACCAGAGGAGGAGCAGCCATTCCAGCACTCGCAGGAAATCACACATACAGGTTATaGTCGTTTTCTGGAAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: PSGAKTRGGAAIPALAGNHTYRL*SFSGRR Trigger: CCTCCTTCCAGAAAACGACCATAACCTGTATGTGTG...ATTTCCTGCGAGTGCTGGAATGGCTGCTCCTCCTCTGGTCTTGGCCCCGGAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 |
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| CDS-3UTR CCA 90 bp | CTAGAGGAGCCCAGCTCCAATCTAGCAGTGAGAAGAGGTCCCTGCCCCCTAGCATTCATCTTCAGGTACTaGTCGGGAGTGAGCGCTGAA | + |
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Preference number: 4 (lower is better) Translates to: LEEPSSNLAVRRGPCPLAFIFRY*SGVSAE Trigger: TTCAGCGCTCACTCCCGACCAGTACCTGAAGATGAA...TGCTAGGGGGCAGGGACCTCTTCTCACTGCTAGATTGGAGCTGGGCTCCTCTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 ENSMUST00000126699.4 |
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| CDS-3UTR CCA 90 bp | GCCCAGCTCCAATCTAGCAGTGAGAAGAGGTCCCTGCCCCCTAGCACAGCACTATTCATCTTCAGGTACTaGTCGGGAGTGAGCGCTGAA | + |
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Preference number: 4 (lower is better) Translates to: AQLQSSSEKRSLPPSTALFIFRY*SGVSAE Trigger: TTCAGCGCTCACTCCCGACCAGTACCTGAAGATGAA...TAGTGCTGTGCTAGGGGGCAGGGACCTCTTCTCACTGCTAGATTGGAGCTGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 ENSMUST00000126699.4 |
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| CDS-3UTR CCA 90 bp | CTAGAAAGAGGAACCTCCAGGTCTAGAGGAGCCCAGCTCCAATCTAGCAGTGAGGATGGGGCACAATTATaGCTGTTCGGGAGCGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: LERGTSRSRGAQLQSSSEDGAQL*LFGSEA Trigger: AGCCTCGCTCCCGAACAGCCATAATTGTGCCCCATC...CTCACTGCTAGATTGGAGCTGGGCTCCTCTAGACCTGGAGGTTCCTCTTTCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 |
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| CDS-3UTR CCA 90 bp | GAGGAACCTCCAGGTCTAGAGGAGCCCAGCTCCAATCTAGCAGTGAGAAGAGGTAGCCCCAGTACTCGTTaGGGAAGCCGTTCATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: EEPPGLEEPSSNLAVRRGSPSTR*GSRSSS Trigger: TGAAGATGAACGGCTTCCCCAACGAGTACTGGGGCT...ACCTCTTCTCACTGCTAGATTGGAGCTGGGCTCCTCTAGACCTGGAGGTTCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 ENSMUST00000126699.4 |
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| CDS-3UTR TCA 90 bp | CTAGAAAGAGGAACCTCCAGGTCTAGAGGAGCCCAGCTCCAATCTAGCAGTGAGCTGCGGGCAGGTGACTaGGGTTACTATAGACATCGT | + |
|
Preference number: 4 (lower is better) Translates to: LERGTSRSRGAQLQSSSELRAGD*GYYRHR Trigger: ACGATGTCTATAGTAACCTCAGTCACCTGCCCGCAG...CTCACTGCTAGATTGGAGCTGGGCTCCTCTAGACCTGGAGGTTCCTCTTTCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 |
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| CDS-3UTR TCA 90 bp | CTAGAAAGAGGAACCTCCAGGTCTAGAGGAGCCCAGCTCCAATCTAGCAGTGAGTCCCGATGTCTGCGGTaGTGTTGGTATAGAGAGGAC | + |
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Preference number: 4 (lower is better) Translates to: LERGTSRSRGAQLQSSSESRCLR*CWYRED Trigger: GTCCTCTCTATACCAACATCACCGCAGACATCGGGA...CTCACTGCTAGATTGGAGCTGGGCTCCTCTAGACCTGGAGGTTCCTCTTTCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 ENSMUST00000126699.4 |
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| CDS-3UTR CCA 90 bp | GTGAGGAGCAGAGGTGTGAGGGACACAACCCCTCCAATTCAGTCTCATGATTACTGCTCCCGGGCACGATaGGGCACAATTATGGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: VRSRGVRDTTPPIQSHDYCSRAR*GTIMAV Trigger: AACAGCCATAATTGTGCCCCATCGTGCCCGGGAGCA...GTAATCATGAGACTGAATTGGAGGGGTTGTGTCCCTCACACCTCTGCTCCTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 |
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| CDS-3UTR CCA 90 bp | GCCCAGCTCCAATCTAGCAGTGAGAAGAGGTCCCTGCCCCCTAGCACAGCACTACACACATACAGGTTATaGTCGTTTTCTGGAAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: AQLQSSSEKRSLPPSTALHTYRL*SFSGRR Trigger: CCTCCTTCCAGAAAACGACCATAACCTGTATGTGTG...TAGTGCTGTGCTAGGGGGCAGGGACCTCTTCTCACTGCTAGATTGGAGCTGGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 |
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| CDS-3UTR CCA 90 bp | GTGAGGAGCAGAGGTGTGAGGGACACAACCCCTCCAATTCAGTCTCATGATTACACTCCGCCAAAGTACTaGGGGTACGGGAGGCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: VRSRGVRDTTPPIQSHDYTPPKY*GYGRLY Trigger: ATACAGCCTCCCGTACCCCCAGTACTTTGGCGGAGT...GTAATCATGAGACTGAATTGGAGGGGTTGTGTCCCTCACACCTCTGCTCCTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 ENSMUST00000126699.4 |
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| CDS-3UTR CCA 90 bp | CTAGAAAGAGGAACCTCCAGGTCTAGAGGAGCCCAGCTCCAATCTAGCAGTGAGAGCCCCAGTACTCGTTaGGGAAGCCGTTCATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LERGTSRSRGAQLQSSSESPSTR*GSRSSS Trigger: TGAAGATGAACGGCTTCCCCAACGAGTACTGGGGCT...CTCACTGCTAGATTGGAGCTGGGCTCCTCTAGACCTGGAGGTTCCTCTTTCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 ENSMUST00000126699.4 |
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| CDS-3UTR CCA 90 bp | GCAGAGGACTCCCAGGATTCGTCACATAAAATGACATCAAAGATTCACAGTCATAGGGCCAGGCCTAGCTaGGGGCCGGCGTTGCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: AEDSQDSSHKMTSKIHSHRARPS*GPALQH Trigger: ATGCTGCAACGCCGGCCCCCAGCTAGGCCTGGCCCT...ATGACTGTGAATCTTTGATGTCATTTTATGTGACGAATCCTGGGAGTCCTCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 ENSMUST00000126699.4 |
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| CDS-3UTR GCA 90 bp | CTAGAAAGAGGAACCTCCAGGTCTAGAGGAGCCCAGCTCCAATCTAGCAGTGAGCAGATACATCATCACTaGCAGTTGGGAGCCCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: LERGTSRSRGAQLQSSSEQIHHH*QLGAHK Trigger: CTTGTGGGCTCCCAACTGGCAGTGATGATGTATCTG...CTCACTGCTAGATTGGAGCTGGGCTCCTCTAGACCTGGAGGTTCCTCTTTCTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 |
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| CDS-3UTR GCA 90 bp | CTAGAAAGAGGAACCTCCAGGTCTAGAGGAGCCCAGCTCCAATCTAGCAGTGAGGTCAGTCCCGATGTCTaGGGTGATGTTGGTATAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LERGTSRSRGAQLQSSSEVSPDV*GDVGIE Trigger: CTCTATACCAACATCACCGCAGACATCGGGACTGAC...CTCACTGCTAGATTGGAGCTGGGCTCCTCTAGACCTGGAGGTTCCTCTTTCTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 ENSMUST00000126699.4 |
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| CDS-3UTR CCA 90 bp | GCAGAGGACTCCCAGGATTCGTCACATAAAATGACATCAAAGATTCACAGTCATAGCAGCAGCCGAAGGTaGTGCTCCCGGGCACGATGG | + |
|
Preference number: 4 (lower is better) Translates to: AEDSQDSSHKMTSKIHSHSSSRR*CSRARW Trigger: CCATCGTGCCCGGGAGCACCACCTTCGGCTGCTGCT...ATGACTGTGAATCTTTGATGTCATTTTATGTGACGAATCCTGGGAGTCCTCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 |
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| CDS-3UTR CCA 90 bp | CTAGAAAGAGGAACCTCCAGGTCTAGAGGAGCCCAGCTCCAATCTAGCAGTGAGTTCATCTTCAGGTACTaGTCGGGAGTGAGCGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LERGTSRSRGAQLQSSSEFIFRY*SGVSAE Trigger: TTCAGCGCTCACTCCCGACCAGTACCTGAAGATGAA...CTCACTGCTAGATTGGAGCTGGGCTCCTCTAGACCTGGAGGTTCCTCTTTCTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 ENSMUST00000126699.4 |
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| CDS-3UTR GCA 90 bp | GCAGAGGACTCCCAGGATTCGTCACATAAAATGACATCAAAGATTCACAGTCATTGCAGCTCCAGGGGCTaGGGGCAGGTGACTGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: AEDSQDSSHKMTSKIHSHCSSRG*GQVTEV Trigger: AACCTCAGTCACCTGCCCGCAGCCCCTGGAGCTGCA...ATGACTGTGAATCTTTGATGTCATTTTATGTGACGAATCCTGGGAGTCCTCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 |
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| CDS-3UTR GCA 90 bp | GTGAGGAGCAGAGGTGTGAGGGACACAACCCCTCCAATTCAGTCTCATGATTACGTCAGTCCCGATGTCTaGGGTGATGTTGGTATAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VRSRGVRDTTPPIQSHDYVSPDV*GDVGIE Trigger: CTCTATACCAACATCACCGCAGACATCGGGACTGAC...GTAATCATGAGACTGAATTGGAGGGGTTGTGTCCCTCACACCTCTGCTCCTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 ENSMUST00000126699.4 |
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| CDS-3UTR CCA 90 bp | GTGAGGAGCAGAGGTGTGAGGGACACAACCCCTCCAATTCAGTCTCATGATTACATCCAAACTTGTTCATaGCAACAGCAACGTGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: VRSRGVRDTTPPIQSHDYIQTCS*QQQRGG Trigger: CCCGCCACGTTGCTGTTGCCATGAACAAGTTTGGAT...GTAATCATGAGACTGAATTGGAGGGGTTGTGTCCCTCACACCTCTGCTCCTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 |
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| CDS-3UTR CCA 90 bp | GTGAGGAGCAGAGGTGTGAGGGACACAACCCCTCCAATTCAGTCTCATGATTACTGTGTCCAAGAATTCTaGGTACGGACCAGGAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VRSRGVRDTTPPIQSHDYCVQEF*VRTRRS Trigger: TGACCTCCTGGTCCGTACCCAGAATTCTTGGACACA...GTAATCATGAGACTGAATTGGAGGGGTTGTGTCCCTCACACCTCTGCTCCTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 ENSMUST00000126699.4 |
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| CDS-3UTR CCA 90 bp | GAGGAACCTCCAGGTCTAGAGGAGCCCAGCTCCAATCTAGCAGTGAGAAGAGGTAGGAGGTCAAATCTGTaGGGATTTTCCTCATTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: EEPPGLEEPSSNLAVRRGRRSNL*GFSSFP Trigger: AGGAAATGAGGAAAATCCCCACAGATTTGACCTCCT...ACCTCTTCTCACTGCTAGATTGGAGCTGGGCTCCTCTAGACCTGGAGGTTCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 ENSMUST00000126699.4 |
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| CDS-3UTR TCA 90 bp | GCAGAGGACTCCCAGGATTCGTCACATAAAATGACATCAAAGATTCACAGTCATCGTTGCAGCATCTCTTaGCGGAAGGCCTGGGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: AEDSQDSSHKMTSKIHSHRCSIS*RKAWEE Trigger: TTCCTCCCAGGCCTTCCGTCAAGAGATGCTGCAACG...ATGACTGTGAATCTTTGATGTCATTTTATGTGACGAATCCTGGGAGTCCTCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 ENSMUST00000126699.4 |
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| CDS-3UTR CCA 90 bp | GTGAGGAGCAGAGGTGTGAGGGACACAACCCCTCCAATTCAGTCTCATGATTACAGGAGGTCAAATCTGTaGGGATTTTCCTCATTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VRSRGVRDTTPPIQSHDYRRSNL*GFSSFP Trigger: AGGAAATGAGGAAAATCCCCACAGATTTGACCTCCT...GTAATCATGAGACTGAATTGGAGGGGTTGTGTCCCTCACACCTCTGCTCCTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 ENSMUST00000126699.4 |
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| CDS-3UTR TCA 90 bp | GCAGAGGACTCCCAGGATTCGTCACATAAAATGACATCAAAGATTCACAGTCATTTCCAGCCTGGTGGATaGCATAAATGCCGTACGCAA | + |
|
Preference number: 4 (lower is better) Translates to: AEDSQDSSHKMTSKIHSHFQPGG*HKCRTQ Trigger: TTGCGTACGGCATTTATGTCATCCACCAGGCTGGAA...ATGACTGTGAATCTTTGATGTCATTTTATGTGACGAATCCTGGGAGTCCTCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 |
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| CDS TCA 90 bp | GGCAGAGGGCCAGGCCTAGCTGGGGGCCGGCGTTGCAGCATCTCTTaGCGGAAGGCCTGGGAGGAACCAGGTGGGTATCGGGGACCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: GRGPGLAGGRRCSIS*RKAWEEPGGYRGPE Trigger: CTCTGGTCCCCGATACCCACCTGGTTCCTCCCAGGCCTTCCGTCAAGAGATGCTGCAACGCCGGCCCCCAGCTAGGCCTGGCCCTCTGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 ENSMUST00000126699.4 |
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| CDS CCA 90 bp | GCAGCAGCCGAAGGTGGTGCTCCCGGGCACGATGGGGCACAATTATaGCTGTTCGGGAGCGAGGCTCACACCCTGCAGGACGGTACCGGC | + |
|
Preference number: 5 (lower is better) Translates to: AAAEGGAPGHDGAQL*LFGSEAHTLQDGTG Trigger: GCCGGTACCGTCCTGCAGGGTGTGAGCCTCGCTCCCGAACAGCCATAATTGTGCCCCATCGTGCCCGGGAGCACCACCTTCGGCTGCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 |
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| CDS-3UTR CAA 90 bp | CCCTCCGGGGCCAAGACCAGAGGAGGAGCAGCCATTCCAGCACTCGCAGGAAATCGGGGAGCTGTGTGGTaGGCAGTGGGCAGAGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PSGAKTRGGAAIPALAGNRGAVW*AVGRGP Trigger: TGGCCCTCTGCCCACTGCCAACCACACAGCTCCCCG...ATTTCCTGCGAGTGCTGGAATGGCTGCTCCTCCTCTGGTCTTGGCCCCGGAGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 ENSMUST00000126699.4 |
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| CDS GCA 90 bp | GGGACCAGAGGGAGACCGGGGACCCCGAGGGTCAGTCCCGATGTCTaGGGTGATGTTGGTATAGAGAGGACCCAGCTCTCTTGCCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GTRGRPGTPRVSPDV*GDVGIERTQLSCQQ Trigger: CTGCTGGCAAGAGAGCTGGGTCCTCTCTATACCAACATCACCGCAGACATCGGGACTGACCCTCGGGGTCCCCGGTCTCCCTCTGGTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 ENSMUST00000126699.4 |
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| CDS TCA 90 bp | CAGAGGGAGACCGGGGACCCCGAGGGTCAGTCCCGATGTCTGCGGTaGTGTTGGTATAGAGAGGACCCAGCTCTCTTGCCAGCAGTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: QRETGDPEGQSRCLR*CWYREDPALLPAVG Trigger: ACCGACTGCTGGCAAGAGAGCTGGGTCCTCTCTATACCAACATCACCGCAGACATCGGGACTGACCCTCGGGGTCCCCGGTCTCCCTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 ENSMUST00000126699.4 |
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| CDS-3UTR CAA 90 bp | GCCCAGCTCCAATCTAGCAGTGAGAAGAGGTCCCTGCCCCCTAGCACAGCACTAACAGTAGGGCAATGCTaGAGCCGGAGGAGCCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: AQLQSSSEKRSLPPSTALTVGQC*SRRSPC Trigger: GCAGGGGCTCCTCCGGCTCAAGCATTGCCCTACTGT...TAGTGCTGTGCTAGGGGGCAGGGACCTCTTCTCACTGCTAGATTGGAGCTGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 |
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| CDS-3UTR CAA 90 bp | GCCCAGCTCCAATCTAGCAGTGAGAAGAGGTCCCTGCCCCCTAGCACAGCACTAAGCTGGGGGCCGGCGTaGCAGCATCTCTTGACGGAA | + |
|
Preference number: 5 (lower is better) Translates to: AQLQSSSEKRSLPPSTALSWGPA*QHLLTE Trigger: TTCCGTCAAGAGATGCTGCAACGCCGGCCCCCAGCT...TAGTGCTGTGCTAGGGGGCAGGGACCTCTTCTCACTGCTAGATTGGAGCTGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 ENSMUST00000126699.4 |
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| CDS-3UTR CAA 90 bp | GAGGAACCTCCAGGTCTAGAGGAGCCCAGCTCCAATCTAGCAGTGAGAAGAGGTCGGGGAGCTGTGTGGTaGGCAGTGGGCAGAGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: EEPPGLEEPSSNLAVRRGRGAVW*AVGRGP Trigger: TGGCCCTCTGCCCACTGCCAACCACACAGCTCCCCG...ACCTCTTCTCACTGCTAGATTGGAGCTGGGCTCCTCTAGACCTGGAGGTTCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 ENSMUST00000126699.4 |
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| CDS-3UTR CAA 90 bp | CTAGAAAGAGGAACCTCCAGGTCTAGAGGAGCCCAGCTCCAATCTAGCAGTGAGCGGGGAGCTGTGTGGTaGGCAGTGGGCAGAGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LERGTSRSRGAQLQSSSERGAVW*AVGRGP Trigger: TGGCCCTCTGCCCACTGCCAACCACACAGCTCCCCG...CTCACTGCTAGATTGGAGCTGGGCTCCTCTAGACCTGGAGGTTCCTCTTTCTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 ENSMUST00000126699.4 |
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| CDS-3UTR CAA 90 bp | GAGGAACCTCCAGGTCTAGAGGAGCCCAGCTCCAATCTAGCAGTGAGAAGAGGTAGCTGGGGGCCGGCGTaGCAGCATCTCTTGACGGAA | + |
|
Preference number: 5 (lower is better) Translates to: EEPPGLEEPSSNLAVRRGSWGPA*QHLLTE Trigger: TTCCGTCAAGAGATGCTGCAACGCCGGCCCCCAGCT...ACCTCTTCTCACTGCTAGATTGGAGCTGGGCTCCTCTAGACCTGGAGGTTCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 ENSMUST00000126699.4 |
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| CDS-3UTR CAA 90 bp | GAGGAACCTCCAGGTCTAGAGGAGCCCAGCTCCAATCTAGCAGTGAGAAGAGGTCATCATCACTGCCAGTaGGGAGCCCACAAGCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: EEPPGLEEPSSNLAVRRGHHHCQ*GAHKQG Trigger: GCCCTGCTTGTGGGCTCCCAACTGGCAGTGATGATG...ACCTCTTCTCACTGCTAGATTGGAGCTGGGCTCCTCTAGACCTGGAGGTTCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 |
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| CDS CCA 90 bp | AGACTTCGGAAGCCCCCTAGTGACAGATACATCATCACTGCCAGTTaGGAGCCCACAAGCAGGGCCAATGTACAGGGTCTCTCCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RLRKPPSDRYIITAS*EPTSRANVQGLSSS Trigger: GCTGCTGGAGAGACCCTGTACATTGGCCCTGCTTGTGGGCTCCCAACTGGCAGTGATGATGTATCTGTCACTAGGGGGCTTCCGAAGTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 ENSMUST00000141114.3 ENSMUST00000141999.8 |
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| CDS-3UTR CAA 90 bp | GTGAGGAGCAGAGGTGTGAGGGACACAACCCCTCCAATTCAGTCTCATGATTACACAGTAGGGCAATGCTaGAGCCGGAGGAGCCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VRSRGVRDTTPPIQSHDYTVGQC*SRRSPC Trigger: GCAGGGGCTCCTCCGGCTCAAGCATTGCCCTACTGT...GTAATCATGAGACTGAATTGGAGGGGTTGTGTCCCTCACACCTCTGCTCCTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 |
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| CDS-3UTR CAA 90 bp | GTGAGGAGCAGAGGTGTGAGGGACACAACCCCTCCAATTCAGTCTCATGATTACAGCTGGGGGCCGGCGTaGCAGCATCTCTTGACGGAA | + |
|
Preference number: 5 (lower is better) Translates to: VRSRGVRDTTPPIQSHDYSWGPA*QHLLTE Trigger: TTCCGTCAAGAGATGCTGCAACGCCGGCCCCCAGCT...GTAATCATGAGACTGAATTGGAGGGGTTGTGTCCCTCACACCTCTGCTCCTCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 ENSMUST00000126699.4 |
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| CDS-3UTR CAA 90 bp | GTGAGGAGCAGAGGTGTGAGGGACACAACCCCTCCAATTCAGTCTCATGATTACCATCATCACTGCCAGTaGGGAGCCCACAAGCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: VRSRGVRDTTPPIQSHDYHHHCQ*GAHKQG Trigger: GCCCTGCTTGTGGGCTCCCAACTGGCAGTGATGATG...GTAATCATGAGACTGAATTGGAGGGGTTGTGTCCCTCACACCTCTGCTCCTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 |
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| CDS CCA 90 bp | ACTGAGGTTACTATAGACATCGTGGGGATGAGAATAGTCGAATGTTaGGCCCGGATCTCGACCAAACAGGGCACTAAGACTTCGGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: TEVTIDIVGMRIVEC*ARISTKQGTKTSEA Trigger: GGCTTCCGAAGTCTTAGTGCCCTGTTTGGTCGAGATCCGGGCCCAACATTCGACTATTCTCATCCCCACGATGTCTATAGTAACCTCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 ENSMUST00000141114.3 ENSMUST00000141999.8 |
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| CDS-3UTR CAA 90 bp | GCAGAGGACTCCCAGGATTCGTCACATAAAATGACATCAAAGATTCACAGTCATGCGTTGCAGCATCTCTaGACGGAAGGCCTGGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: AEDSQDSSHKMTSKIHSHALQHL*TEGLGG Trigger: TCCTCCCAGGCCTTCCGTCAAGAGATGCTGCAACGC...ATGACTGTGAATCTTTGATGTCATTTTATGTGACGAATCCTGGGAGTCCTCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 ENSMUST00000126699.4 |
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| CDS GCA 90 bp | TTCTTCATCACGAAGGGCTTCCCTCACCCCTACGTTCAGCAGCTTTaGCCTGTTAAACGTTCCATTTCCAGCCTGGTGGATGACATAAAT | + |
|
Preference number: 5 (lower is better) Translates to: FFITKGFPHPYVQQL*PVKRSISSLVDDIN Trigger: ATTTATGTCATCCACCAGGCTGGAAATGGAACGTTTAACAGGGCAAAGCTGCTGAACGTAGGGGTGAGGGAAGCCCTTCGTGATGAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 |
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| CDS CCA 90 bp | AGTCGGTACGTTAGTGAGTTCATTCCATCTTGTGTCCAAGAATTCTaGGTACGGACCAGGAGGTCAAATCTGTGGGGATTTTCCTCATTT | + |
|
Preference number: 5 (lower is better) Translates to: SRYVSEFIPSCVQEF*VRTRRSNLWGFSSF Trigger: AAATGAGGAAAATCCCCACAGATTTGACCTCCTGGTCCGTACCCAGAATTCTTGGACACAAGATGGAATGAACTCACTAACGTACCGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 ENSMUST00000126699.4 |
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| CDS CAA 90 bp | GGGCAGAGGGCCAGGCCTAGCTGGGGGCCGGCGTTGCAGCATCTCTaGACGGAAGGCCTGGGAGGAACCAGGTGGGTATCGGGGACCAGA | + |
|
Preference number: 6 (lower is better) Translates to: GQRARPSWGPALQHL*TEGLGGTRWVSGTR Trigger: TCTGGTCCCCGATACCCACCTGGTTCCTCCCAGGCCTTCCGTCAAGAGATGCTGCAACGCCGGCCCCCAGCTAGGCCTGGCCCTCTGCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 ENSMUST00000126699.4 |
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| CDS TCA 72 bp | GCGAGGCTCACACCCTGCAGGACGGTACCGGCCCCCTaGTTCCACCCGGGGATTCCGCTCCACAATCTCCGC | + |
|
Preference number: 6 (lower is better) Translates to: ARLTPCRTVPAP*FHPGIPLHNLR Trigger: GCGGAGATTGTGGAGCGGAATCCCCGGGTGGAATCAGGGGGCCGGTACCGTCCTGCAGGGTGTGAGCCTCGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 |
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| CDS CAA 72 bp | AGTGGGCAGAGGGCCAGGCCTAGCTGGGGGCCGGCGTaGCAGCATCTCTTGACGGAAGGCCTGGGAGGAACC | + |
|
Preference number: 6 (lower is better) Translates to: SGQRARPSWGPA*QHLLTEGLGGT Trigger: GGTTCCTCCCAGGCCTTCCGTCAAGAGATGCTGCAACGCCGGCCCCCAGCTAGGCCTGGCCCTCTGCCCACT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 ENSMUST00000126699.4 |
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| CDS CAA 90 bp | GTGGTTGGCAGTGGGCAGAGGGCCAGGCCTAGCTGGGGGCCGGCGTaGCAGCATCTCTTGACGGAAGGCCTGGGAGGAACCAGGTGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: VVGSGQRARPSWGPA*QHLLTEGLGGTRWV Trigger: TACCCACCTGGTTCCTCCCAGGCCTTCCGTCAAGAGATGCTGCAACGCCGGCCCCCAGCTAGGCCTGGCCCTCTGCCCACTGCCAACCAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 ENSMUST00000126699.4 |
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| CDS TCA 72 bp | CCAGGCCTAGCTGGGGGCCGGCGTTGCAGCATCTCTTaGCGGAAGGCCTGGGAGGAACCAGGTGGGTATCGG | + |
|
Preference number: 6 (lower is better) Translates to: PGLAGGRRCSIS*RKAWEEPGGYR Trigger: CCGATACCCACCTGGTTCCTCCCAGGCCTTCCGTCAAGAGATGCTGCAACGCCGGCCCCCAGCTAGGCCTGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 ENSMUST00000126699.4 |
||
| CDS CAA 72 bp | GCCAGGCCTAGCTGGGGGCCGGCGTTGCAGCATCTCTaGACGGAAGGCCTGGGAGGAACCAGGTGGGTATCG | + |
|
Preference number: 6 (lower is better) Translates to: ARPSWGPALQHL*TEGLGGTRWVS Trigger: CGATACCCACCTGGTTCCTCCCAGGCCTTCCGTCAAGAGATGCTGCAACGCCGGCCCCCAGCTAGGCCTGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 ENSMUST00000126699.4 |
||
| CDS CCA 72 bp | GAAGGTGGTGCTCCCGGGCACGATGGGGCACAATTATaGCTGTTCGGGAGCGAGGCTCACACCCTGCAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: EGGAPGHDGAQL*LFGSEAHTLQD Trigger: GTCCTGCAGGGTGTGAGCCTCGCTCCCGAACAGCCATAATTGTGCCCCATCGTGCCCGGGAGCACCACCTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 |
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| CDS GCA 72 bp | GGGAGACCGGGGACCCCGAGGGTCAGTCCCGATGTCTaGGGTGATGTTGGTATAGAGAGGACCCAGCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: GRPGTPRVSPDV*GDVGIERTQLS Trigger: AGAGAGCTGGGTCCTCTCTATACCAACATCACCGCAGACATCGGGACTGACCCTCGGGGTCCCCGGTCTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 ENSMUST00000126699.4 |
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| CDS TCA 72 bp | ACCGGGGACCCCGAGGGTCAGTCCCGATGTCTGCGGTaGTGTTGGTATAGAGAGGACCCAGCTCTCTTGCCA | + |
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Preference number: 6 (lower is better) Translates to: TGDPEGQSRCLR*CWYREDPALLP Trigger: TGGCAAGAGAGCTGGGTCCTCTCTATACCAACATCACCGCAGACATCGGGACTGACCCTCGGGGTCCCCGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 ENSMUST00000126699.4 |
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| CDS TCA 72 bp | GCCGTTCATCTTCAGGTACTGGTCGGGAGTGAGCGCTaGAACTCCGCCAAAGTACTGGGGGTACGGGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: AVHLQVLVGSER*NSAKVLGVREA Trigger: AGCCTCCCGTACCCCCAGTACTTTGGCGGAGTTTCAGCGCTCACTCCCGACCAGTACCTGAAGATGAACGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 ENSMUST00000126699.4 |
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| CDS TCA 72 bp | TGGGGAAGCCGTTCATCTTCAGGTACTGGTCGGGAGTaGGCGCTGAAACTCCGCCAAAGTACTGGGGGTACG | + |
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Preference number: 6 (lower is better) Translates to: WGSRSSSGTGRE*ALKLRQSTGGT Trigger: CGTACCCCCAGTACTTTGGCGGAGTTTCAGCGCTCACTCCCGACCAGTACCTGAAGATGAACGGCTTCCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 ENSMUST00000126699.4 |
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| CDS GCA 72 bp | ACGAAGGGCTTCCCTCACCCCTACGTTCAGCAGCTTTaGCCTGTTAAACGTTCCATTTCCAGCCTGGTGGAT | + |
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Preference number: 6 (lower is better) Translates to: TKGFPHPYVQQL*PVKRSISSLVD Trigger: ATCCACCAGGCTGGAAATGGAACGTTTAACAGGGCAAAGCTGCTGAACGTAGGGGTGAGGGAAGCCCTTCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 |
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| CDS CCA 72 bp | ACTATAGACATCGTGGGGATGAGAATAGTCGAATGTTaGGCCCGGATCTCGACCAAACAGGGCACTAAGACT | + |
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Preference number: 6 (lower is better) Translates to: TIDIVGMRIVEC*ARISTKQGTKT Trigger: AGTCTTAGTGCCCTGTTTGGTCGAGATCCGGGCCCAACATTCGACTATTCTCATCCCCACGATGTCTATAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 ENSMUST00000141114.3 ENSMUST00000141999.8 |
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| CDS CCA 72 bp | GTTAGTGAGTTCATTCCATCTTGTGTCCAAGAATTCTaGGTACGGACCAGGAGGTCAAATCTGTGGGGATTT | + |
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Preference number: 6 (lower is better) Translates to: VSEFIPSCVQEF*VRTRRSNLWGF Trigger: AAATCCCCACAGATTTGACCTCCTGGTCCGTACCCAGAATTCTTGGACACAAGATGGAATGAACTCACTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064272.10 ENSMUST00000111313.10 ENSMUST00000126699.4 |
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