Pregenerated sensors for B4GALT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028413Ensembl transcript IDs: ENSMUST00000030121.13, ENSMUST00000108096.3
Found 152 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CATCACCGCAGGCAGGCACAGAACACGGCCTGGCACAGGGCTCTGTaGATGACGACAGCTCATGGGTACACTGAGCAGTGGGAGCACCCA | + |
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Preference number: 1 (lower is better) Translates to: HHRRQAQNTAWHRAL*MTTAHGYTEQWEHP Trigger: TGGGTGCTCCCACTGCTCAGTGTACCCATGAGCTGTCGTCATTCACAGAGCCCTGTGCCAGGCCGTGTTCTGTGCCTGCCTGCGGTGATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| 3UTR TCA 90 bp | GGCCTGGCACAGGGCTCTGTGAATGACGACAGCTCATGGGTACACTaGGCAGTGGGAGCACCCACTAAAACCCTGAGTGGCAAGGAGGGG | + |
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Preference number: 1 (lower is better) Translates to: GLAQGSVNDDSSWVH*AVGAPTKTLSGKEG Trigger: CCCCTCCTTGCCACTCAGGGTTTTAGTGGGTGCTCCCACTGCTCAGTGTACCCATGAGCTGTCGTCATTCACAGAGCCCTGTGCCAGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| 3UTR TCA 90 bp | CCCAAGCCTAACGGTGCCTTGGGCTGGAGGTTCCCCAAAGGATGCTaGAAGGGAGGAGATAGGAGGACAGGCAAGACAGTTTCCCTTGGT | + |
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Preference number: 1 (lower is better) Translates to: PKPNGALGWRFPKGC*KGGDRRTGKTVSLG Trigger: ACCAAGGGAAACTGTCTTGCCTGTCCTCCTATCTCCTCCCTTTCAGCATCCTTTGGGGAACCTCCAGCCCAAGGCACCGTTAGGCTTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| 3UTR TCA 90 bp | AAGAGAAAGGCACAGCATGTTGACACCAGGGTGAGAATTCCCAGGTaGAGGGAACGTCCCCTTCTGTCCTCTAGTCCCCAGTGGCATCTC | + |
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Preference number: 1 (lower is better) Translates to: KRKAQHVDTRVRIPR*RERPLLSSSPQWHL Trigger: GAGATGCCACTGGGGACTAGAGGACAGAAGGGGACGTTCCCTTCACCTGGGAATTCTCACCCTGGTGTCAACATGCTGTGCCTTTCTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| 3UTR CCA 90 bp | GTGAGAAGGGAAAGGAAAGAAGGAAGGAAGGAGAACAATAAGAACTaGAGACGTTGGGTGGGTCAGGGAGTGTGGTGGAGGCTCGGAGAG | + |
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Preference number: 1 (lower is better) Translates to: VRRERKEGRKENNKN*RRWVGQGVWWRLGE Trigger: CTCTCCGAGCCTCCACCACACTCCCTGACCCACCCAACGTCTCCAGTTCTTATTGTTCTCCTTCCTTCCTTCTTTCCTTTCCCTTCTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| 3UTR CCA 90 bp | AAGGAGAACAATAAGAACTGGAGACGTTGGGTGGGTCAGGGAGTGTaGTGGAGGCTCGGAGAGATGGTAAACAAACCTGACTGCTATGAG | + |
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Preference number: 1 (lower is better) Translates to: KENNKNWRRWVGQGV*WRLGEMVNKPDCYE Trigger: CTCATAGCAGTCAGGTTTGTTTACCATCTCTCCGAGCCTCCACCACACTCCCTGACCCACCCAACGTCTCCAGTTCTTATTGTTCTCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| 3UTR CCA 90 bp | GATATCAACATACAAACACAGTATCACAGGTCTGGAACAGCCCAGTaGGCAGGGAGACCCTGCCAGGCTAAAGGGTGGCACATTTCCTTT | + |
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Preference number: 1 (lower is better) Translates to: DINIQTQYHRSGTAQ*AGRPCQAKGWHISF Trigger: AAAGGAAATGTGCCACCCTTTAGCCTGGCAGGGTCTCCCTGCCCACTGGGCTGTTCCAGACCTGTGATACTGTGTTTGTATGTTGATATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| 3UTR CCA 90 bp | GAGAACAATAAGAACTGGAGACGTTGGGTGGGTCAGGGAGTGTGGTaGAGGCTCGGAGAGATGGTAAACAAACCTGACTGCTATGAGTTT | + |
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Preference number: 1 (lower is better) Translates to: ENNKNWRRWVGQGVW*RLGEMVNKPDCYEF Trigger: AAACTCATAGCAGTCAGGTTTGTTTACCATCTCTCCGAGCCTCCACCACACTCCCTGACCCACCCAACGTCTCCAGTTCTTATTGTTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| 3UTR TCA 90 bp | TCCAGGTCACCAACAAAAATAGAGAAAGAGAAAGGCACAGCATGTTaGCACCAGGGTGAGAATTCCCAGGTGAAGGGAACGTCCCCTTCT | + |
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Preference number: 1 (lower is better) Translates to: SRSPTKIEKEKGTAC*HQGENSQVKGTSPS Trigger: AGAAGGGGACGTTCCCTTCACCTGGGAATTCTCACCCTGGTGTCAACATGCTGTGCCTTTCTCTTTCTCTATTTTTGTTGGTGACCTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| 3UTR TCA 90 bp | ACAAATGAGAGGGACCAGCCCAGTCAACTGGCAGAGACACATATCTaGGGTCTCCGGCCATTCTCAGGTCTCTTATTGGTACTAAAAATG | + |
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Preference number: 1 (lower is better) Translates to: TNERDQPSQLAETHI*GLRPFSGLLLVLKM Trigger: CATTTTTAGTACCAATAAGAGACCTGAGAATGGCCGGAGACCTCAGATATGTGTCTCTGCCAGTTGACTGGGCTGGTCCCTCTCATTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| 3UTR CCA 90 bp | TCCCTCAACAAGGGACCTGAAAGTAATTTTGCTCTTTACAAAACCTaGCCTGCCAGCTCAATCAGAGCTCCTTTGACCACTACAGCATAC | + |
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Preference number: 1 (lower is better) Translates to: SLNKGPESNFALYKT*PASSIRAPLTTTAY Trigger: GTATGCTGTAGTGGTCAAAGGAGCTCTGATTGAGCTGGCAGGCCAGGTTTTGTAAAGAGCAAAATTACTTTCAGGTCCCTTGTTGAGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| 3UTR GCA 90 bp | ATGAACAAAACCCAACACGAACAGCATAGAGAAAAGGCAGAGGTTTaGTTTAGGAGAGAAAGAAGCAACACACTCAATGAGTCTGTCTCC | + |
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Preference number: 1 (lower is better) Translates to: MNKTQHEQHREKAEV*FRRERSNTLNESVS Trigger: GGAGACAGACTCATTGAGTGTGTTGCTTCTTTCTCTCCTAAAGCAAACCTCTGCCTTTTCTCTATGCTGTTCGTGTTGGGTTTTGTTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| 3UTR CAA 90 bp | CCACCTGGGGGAGTGGAGTGGGGAGTTCTGCCAGGTAAGCAGATGTaGTCTCCCAAGTTCCTGACCCAGATGTCTGGCAGGATAACGCTG | + |
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Preference number: 2 (lower is better) Translates to: PPGGVEWGVLPGKQM*SPKFLTQMSGRITL Trigger: CAGCGTTATCCTGCCAGACATCTGGGTCAGGAACTTGGGAGACAACATCTGCTTACCTGGCAGAACTCCCCACTCCACTCCCCCAGGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| 3UTR-3UTR TCA 90 bp | CATGAGGGCGTCAGTTCTTGGTGGCTGAGGGTCCTTCCACCCAGCCCACCTGGGATCTGGAGGGACGTCTaGATGATAAGAAGAACTGTC | + |
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Preference number: 2 (lower is better) Translates to: HEGVSSWWLRVLPPSPPGIWRDV*MIRRTV Trigger: GACAGTTCTTCTTATCATTCAGACGTCCCTCCAGAT...CCCAGGTGGGCTGGGTGGAAGGACCCTCAGCCACCAAGAACTGACGCCCTCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| 3UTR-3UTR TCA 90 bp | ACAGCTGAGCCTAAGGATCCCAGCCCAGGCTTCCTCTTTGACGCCCTCTCGGCTCTGACTCTTTGGGGGTaGCACAACCAAGAAGTCTCT | + |
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Preference number: 2 (lower is better) Translates to: TAEPKDPSPGFLFDALSALTLWG*HNQEVS Trigger: AGAGACTTCTTGGTTGTGTCACCCCCAAAGAGTCAG...AGCCGAGAGGGCGTCAAAGAGGAAGCCTGGGCTGGGATCCTTAGGCTCAGCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| 3UTR CAA 90 bp | AGTGGGCAGGGAGACCCTGCCAGGCTAAAGGGTGGCACATTTCCTTaGCTTTCCTGTGCCTCTGATCTGTCCCAAAGGCCACACTATCCA | + |
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Preference number: 2 (lower is better) Translates to: SGQGDPARLKGGTFP*LSCASDLSQRPHYP Trigger: TGGATAGTGTGGCCTTTGGGACAGATCAGAGGCACAGGAAAGCAAAGGAAATGTGCCACCCTTTAGCCTGGCAGGGTCTCCCTGCCCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| 3UTR-3UTR GCA 90 bp | TGCCCAAGCCTAACGGTGCCTTGGGCTGGAGGTTCCCCAAAGGATGCTGAAAGGTTACAAAACCTGGCCTaGCAGCTCAATCAGAGCTCC | + |
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Preference number: 2 (lower is better) Translates to: CPSLTVPWAGGSPKDAERLQNLA*QLNQSS Trigger: GGAGCTCTGATTGAGCTGGCAGGCCAGGTTTTGTAA...CCTTTCAGCATCCTTTGGGGAACCTCCAGCCCAAGGCACCGTTAGGCTTGGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| 3UTR-3UTR TCA 90 bp | CCACCCCCAGCCCCAATGGTAAACACATTTGTACACATGGGATATCAACATACATGGAGACAGGCCACGTaGGTGAGAGTGCCCAGGCCC | + |
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Preference number: 2 (lower is better) Translates to: PPPAPMVNTFVHMGYQHTWRQAT*VRVPRP Trigger: GGGCCTGGGCACTCTCACTCACGTGGCCTGTCTCCA...TGTATGTTGATATCCCATGTGTACAAATGTGTTTACCATTGGGGCTGGGGGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| 3UTR-3UTR TCA 90 bp | TGCCCAAGCCTAACGGTGCCTTGGGCTGGAGGTTCCCCAAAGGATGCTGAAAGGACCACGTATCTGACATaGACAAAACCCAACACGAAC | + |
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Preference number: 2 (lower is better) Translates to: CPSLTVPWAGGSPKDAERTTYLT*TKPNTN Trigger: GTTCGTGTTGGGTTTTGTTCATGTCAGATACGTGGT...CCTTTCAGCATCCTTTGGGGAACCTCCAGCCCAAGGCACCGTTAGGCTTGGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| 3UTR-3UTR GCA 90 bp | CTAGTCCCCAGTGGCATCTCTTGGGCCAGGCTAATGCCCAAGCCTAACGGTGCCGAAAAGGCAGAGGTTTaGTTTAGGAGAGAAAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: LVPSGISWARLMPKPNGAEKAEV*FRRERS Trigger: GCTTCTTTCTCTCCTAAAGCAAACCTCTGCCTTTTC...GGCACCGTTAGGCTTGGGCATTAGCCTGGCCCAAGAGATGCCACTGGGGACTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| 3UTR-3UTR CCA 90 bp | CCACCCCCAGCCCCAATGGTAAACACATTTGTACACATGGGATATCAACATACAGAGGGCGTCAGTTCTTaGTGGCTGAGGGTCCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: PPPAPMVNTFVHMGYQHTEGVSS*WLRVLP Trigger: TGGAAGGACCCTCAGCCACCAAGAACTGACGCCCTC...TGTATGTTGATATCCCATGTGTACAAATGTGTTTACCATTGGGGCTGGGGGTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| 3UTR-3UTR CCA 90 bp | CCCCTTCTGTCCTCTAGTCCCCAGTGGCATCTCTTGGGCCAGGCTAATGCCCAATCTTTTAAGGCACTTTaGAAAAGTCAGGATCTTGGG | + |
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Preference number: 2 (lower is better) Translates to: PLLSSSPQWHLLGQANAQSFKAL*KSQDLG Trigger: CCCAAGATCCTGACTTTTCCAAAGTGCCTTAAAAGA...TTGGGCATTAGCCTGGCCCAAGAGATGCCACTGGGGACTAGAGGACAGAAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| 3UTR-3UTR CCA 90 bp | GTATCTGACATGAACAAAACCCAACACGAACAGCATAGAGAAAAGGCAGAGGTTGTGGGTCAGGGAGTGTaGTGGAGGCTCGGAGAGATG | + |
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Preference number: 2 (lower is better) Translates to: VSDMNKTQHEQHREKAEVVGQGV*WRLGEM Trigger: CATCTCTCCGAGCCTCCACCACACTCCCTGACCCAC...AACCTCTGCCTTTTCTCTATGCTGTTCGTGTTGGGTTTTGTTCATGTCAGATAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| 3UTR-3UTR TCA 90 bp | TATCAACATACAAACACAGTATCACAGGTCTGGAACAGCCCAGTGGGCAGGGAGAACTGTGTACAGTTCTaGCTCTTTGGGGGTGACACA | + |
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Preference number: 2 (lower is better) Translates to: YQHTNTVSQVWNSPVGRENCVQF*LFGGDT Trigger: TGTGTCACCCCCAAAGAGTCAGAACTGTACACAGTT...CTCCCTGCCCACTGGGCTGTTCCAGACCTGTGATACTGTGTTTGTATGTTGATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| 3UTR-3UTR CCA 90 bp | ATCAGGACCATAATGAGATGCAAGTCTTTGAAAATGAGACGCTCACATCTGGGGCTCACTAGAGCATGCTaGGTCACAGACGCATGCACT | + |
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Preference number: 2 (lower is better) Translates to: IRTIMRCKSLKMRRSHLGLTRAC*VTDACT Trigger: AGTGCATGCGTCTGTGACCCAGCATGCTCTAGTGAG...CCCCAGATGTGAGCGTCTCATTTTCAAAGACTTGCATCTCATTATGGTCCTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108096.3 |
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| 3UTR-3UTR GCA 90 bp | CCACCCCCAGCCCCAATGGTAAACACATTTGTACACATGGGATATCAACATACAGTGGCACATTTCCTTTaGTTTCCTGTGCCTCTGATC | + |
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Preference number: 2 (lower is better) Translates to: PPPAPMVNTFVHMGYQHTVAHFL*FPVPLI Trigger: GATCAGAGGCACAGGAAAGCAAAGGAAATGTGCCAC...TGTATGTTGATATCCCATGTGTACAAATGTGTTTACCATTGGGGCTGGGGGTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| 3UTR-3UTR TCA 90 bp | GTATCTGACATGAACAAAACCCAACACGAACAGCATAGAGAAAAGGCAGAGGTTTTCAGACTGTACAAATaGGAGGGACCAGCCCAGTCA | + |
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Preference number: 2 (lower is better) Translates to: VSDMNKTQHEQHREKAEVFRLYK*EGPAQS Trigger: TGACTGGGCTGGTCCCTCTCATTTGTACAGTCTGAA...AACCTCTGCCTTTTCTCTATGCTGTTCGTGTTGGGTTTTGTTCATGTCAGATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| 3UTR-3UTR TCA 90 bp | TATCAACATACAAACACAGTATCACAGGTCTGGAACAGCCCAGTGGGCAGGGAGACAGTCACTAAGTTTTaGACTGTGTACAGTTCTGAC | + |
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Preference number: 2 (lower is better) Translates to: YQHTNTVSQVWNSPVGRETVTKF*TVYSSD Trigger: GTCAGAACTGTACACAGTTCAAAACTTAGTGACTGT...CTCCCTGCCCACTGGGCTGTTCCAGACCTGTGATACTGTGTTTGTATGTTGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| 3UTR-3UTR CCA 90 bp | CCACCCCCAGCCCCAATGGTAAACACATTTGTACACATGGGATATCAACATACAAAGGCACAATCATGCTaGAGAATGAACAGTCTGACC | + |
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Preference number: 2 (lower is better) Translates to: PPPAPMVNTFVHMGYQHTKAQSC*RMNSLT Trigger: GGTCAGACTGTTCATTCTCCAGCATGATTGTGCCTT...TGTATGTTGATATCCCATGTGTACAAATGTGTTTACCATTGGGGCTGGGGGTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| 3UTR TCA 72 bp | AGGCACAGAACACGGCCTGGCACAGGGCTCTGTGAATaGCGACAGCTCATGGGTACACTGAGCAGTGGGAGC | + |
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Preference number: 3 (lower is better) Translates to: RHRTRPGTGLCE*RQLMGTLSSGS Trigger: GCTCCCACTGCTCAGTGTACCCATGAGCTGTCGTCATTCACAGAGCCCTGTGCCAGGCCGTGTTCTGTGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| 3UTR TCA 72 bp | AGGCAGGCACAGAACACGGCCTGGCACAGGGCTCTGTaGATGACGACAGCTCATGGGTACACTGAGCAGTGG | + |
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Preference number: 3 (lower is better) Translates to: RQAQNTAWHRAL*MTTAHGYTEQW Trigger: CCACTGCTCAGTGTACCCATGAGCTGTCGTCATTCACAGAGCCCTGTGCCAGGCCGTGTTCTGTGCCTGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| 3UTR-3UTR CAA 90 bp | CCCCTTCTGTCCTCTAGTCCCCAGTGGCATCTCTTGGGCCAGGCTAATGCCCAATCTGAGGGCAAGGCCTaGGAATCCACACACTACAGG | + |
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Preference number: 3 (lower is better) Translates to: PLLSSSPQWHLLGQANAQSEGKA*ESTHYR Trigger: CCTGTAGTGTGTGGATTCCAAGGCCTTGCCCTCAGA...TTGGGCATTAGCCTGGCCCAAGAGATGCCACTGGGGACTAGAGGACAGAAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| 3UTR GCA 72 bp | CCACACCGCCTCTATACTCAGGGCTGGAGTCCAGGCTaGCCGAAGCAGAAAGGGCTTAGCTCTGGGATTAGA | + |
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Preference number: 3 (lower is better) Translates to: PHRLYTQGWSPG*PKQKGLSSGIR Trigger: TCTAATCCCAGAGCTAAGCCCTTTCTGCTTCGGGCAGCCTGGACTCCAGCCCTGAGTATAGAGGCGGTGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| 3UTR TCA 72 bp | CAGGGCTCTGTGAATGACGACAGCTCATGGGTACACTaGGCAGTGGGAGCACCCACTAAAACCCTGAGTGGC | + |
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Preference number: 3 (lower is better) Translates to: QGSVNDDSSWVH*AVGAPTKTLSG Trigger: GCCACTCAGGGTTTTAGTGGGTGCTCCCACTGCTCAGTGTACCCATGAGCTGTCGTCATTCACAGAGCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| 3UTR TCA 72 bp | GCACAGCATGTTGACACCAGGGTGAGAATTCCCAGGTaGAGGGAACGTCCCCTTCTGTCCTCTAGTCCCCAG | + |
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Preference number: 3 (lower is better) Translates to: AQHVDTRVRIPR*RERPLLSSSPQ Trigger: CTGGGGACTAGAGGACAGAAGGGGACGTTCCCTTCACCTGGGAATTCTCACCCTGGTGTCAACATGCTGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| 3UTR CCA 72 bp | ATACAAACACAGTATCACAGGTCTGGAACAGCCCAGTaGGCAGGGAGACCCTGCCAGGCTAAAGGGTGGCAC | + |
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Preference number: 3 (lower is better) Translates to: IQTQYHRSGTAQ*AGRPCQAKGWH Trigger: GTGCCACCCTTTAGCCTGGCAGGGTCTCCCTGCCCACTGGGCTGTTCCAGACCTGTGATACTGTGTTTGTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| 3UTR-3UTR CAA 90 bp | ACAGCTGAGCCTAAGGATCCCAGCCCAGGCTTCCTCTTTGACGCCCTCTCGGCTTACAGTTCTGACTCTTaGGGGGTGACACAACCAAGA | + |
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Preference number: 3 (lower is better) Translates to: TAEPKDPSPGFLFDALSAYSSDS*GVTQPR Trigger: TCTTGGTTGTGTCACCCCCAAAGAGTCAGAACTGTA...AGCCGAGAGGGCGTCAAAGAGGAAGCCTGGGCTGGGATCCTTAGGCTCAGCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| 3UTR TCA 72 bp | GGGTACACTGAGCAGTGGGAGCACCCACTAAAACCCTaGGTGGCAAGGAGGGGCTTTAGAGGCACCAGAATT | + |
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Preference number: 3 (lower is better) Translates to: GYTEQWEHPLKP*VARRGFRGTRI Trigger: AATTCTGGTGCCTCTAAAGCCCCTCCTTGCCACTCAGGGTTTTAGTGGGTGCTCCCACTGCTCAGTGTACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| 3UTR CCA 72 bp | AAGAACTGGAGACGTTGGGTGGGTCAGGGAGTGTGGTaGAGGCTCGGAGAGATGGTAAACAAACCTGACTGC | + |
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Preference number: 3 (lower is better) Translates to: KNWRRWVGQGVW*RLGEMVNKPDC Trigger: GCAGTCAGGTTTGTTTACCATCTCTCCGAGCCTCCACCACACTCCCTGACCCACCCAACGTCTCCAGTTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| 3UTR CCA 72 bp | GAAGGAAGGAAGGAGAACAATAAGAACTGGAGACGTTaGGTGGGTCAGGGAGTGTGGTGGAGGCTCGGAGAG | + |
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Preference number: 3 (lower is better) Translates to: EGRKENNKNWRR*VGQGVWWRLGE Trigger: CTCTCCGAGCCTCCACCACACTCCCTGACCCACCCAACGTCTCCAGTTCTTATTGTTCTCCTTCCTTCCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| 3UTR CCA 72 bp | ATGGGATATCAACATACAAACACAGTATCACAGGTCTaGAACAGCCCAGTGGGCAGGGAGACCCTGCCAGGC | + |
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Preference number: 3 (lower is better) Translates to: MGYQHTNTVSQV*NSPVGRETLPG Trigger: GCCTGGCAGGGTCTCCCTGCCCACTGGGCTGTTCCAGACCTGTGATACTGTGTTTGTATGTTGATATCCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| 3UTR TCA 72 bp | AGGGACCAGCCCAGTCAACTGGCAGAGACACATATCTaGGGTCTCCGGCCATTCTCAGGTCTCTTATTGGTA | + |
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Preference number: 3 (lower is better) Translates to: RDQPSQLAETHI*GLRPFSGLLLV Trigger: TACCAATAAGAGACCTGAGAATGGCCGGAGACCTCAGATATGTGTCTCTGCCAGTTGACTGGGCTGGTCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| 3UTR CCA 72 bp | AATAAGAACTGGAGACGTTGGGTGGGTCAGGGAGTGTaGTGGAGGCTCGGAGAGATGGTAAACAAACCTGAC | + |
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Preference number: 3 (lower is better) Translates to: NKNWRRWVGQGV*WRLGEMVNKPD Trigger: GTCAGGTTTGTTTACCATCTCTCCGAGCCTCCACCACACTCCCTGACCCACCCAACGTCTCCAGTTCTTATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| 3UTR-3UTR CAA 90 bp | ACAGCTGAGCCTAAGGATCCCAGCCCAGGCTTCCTCTTTGACGCCCTCTCGGCTGACCTGAAAGTAATTTaGCTCTTTACAAAACCTGGC | + |
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Preference number: 3 (lower is better) Translates to: TAEPKDPSPGFLFDALSADLKVI*LFTKPG Trigger: GCCAGGTTTTGTAAAGAGCAAAATTACTTTCAGGTC...AGCCGAGAGGGCGTCAAAGAGGAAGCCTGGGCTGGGATCCTTAGGCTCAGCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| 3UTR TCA 72 bp | AAAGGGTGGCACATTTCCTTTGCTTTCCTGTGCCTCTaGTCTGTCCCAAAGGCCACACTATCCAGGTCACCA | + |
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Preference number: 3 (lower is better) Translates to: KGWHISFAFLCL*SVPKATLSRSP Trigger: TGGTGACCTGGATAGTGTGGCCTTTGGGACAGATCAGAGGCACAGGAAAGCAAAGGAAATGTGCCACCCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| 3UTR CCA 72 bp | AAGGGACCTGAAAGTAATTTTGCTCTTTACAAAACCTaGCCTGCCAGCTCAATCAGAGCTCCTTTGACCACT | + |
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Preference number: 3 (lower is better) Translates to: KGPESNFALYKT*PASSIRAPLTT Trigger: AGTGGTCAAAGGAGCTCTGATTGAGCTGGCAGGCCAGGTTTTGTAAAGAGCAAAATTACTTTCAGGTCCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| 3UTR TCA 72 bp | AATGTTACACTCACCCTGGGCATCTGGAGGGACGTCTaGATGATAAGAAGAACTGTCATTCAGACTGTACAA | + |
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Preference number: 3 (lower is better) Translates to: NVTLTLGIWRDV*MIRRTVIQTVQ Trigger: TTGTACAGTCTGAATGACAGTTCTTCTTATCATTCAGACGTCCCTCCAGATGCCCAGGGTGAGTGTAACATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| CDS-3UTR GCA 90 bp | TCACCGCAGGCAGGCACAGAACACGGCCTGGCACAGGGCTCTGTGAATGACGACCTCCTGGGGGCTGCTTaGTGGCTGCGGCGCCGTTCG | + |
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Preference number: 4 (lower is better) Translates to: SPQAGTEHGLAQGSVNDDLLGAA*WLRRRS Trigger: CGAACGGCGCCGCAGCCAGCAAGCAGCCCCCAGGAG...GTCGTCATTCACAGAGCCCTGTGCCAGGCCGTGTTCTGTGCCTGCCTGCGGTGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
||
| CDS-3UTR GCA 90 bp | CATGAGGGCGTCAGTTCTTGGTGGCTGAGGGTCCTTCCACCCAGCCCACCTGGGGCCGGGGCCAGAAGCTaGACCAGGGCTGGAGTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: HEGVSSWWLRVLPPSPPGAGARS*TRAGVE Trigger: CTCGACTCCAGCCCTGGTGCAGCTTCTGGCCCCGGC...CCCAGGTGGGCTGGGTGGAAGGACCCTCAGCCACCAAGAACTGACGCCCTCATG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| CDS-3UTR GCA 90 bp | ACAGCTGAGCCTAAGGATCCCAGCCCAGGCTTCCTCTTTGACGCCCTCTCGGCTAGGGTGACGCCGAGGTaGAGCGCGCAGACGGCCACG | + |
|
Preference number: 4 (lower is better) Translates to: TAEPKDPSPGFLFDALSARVTPR*SAQTAT Trigger: CGTGGCCGTCTGCGCGCTGCACCTCGGCGTCACCCT...AGCCGAGAGGGCGTCAAAGAGGAAGCCTGGGCTGGGATCCTTAGGCTCAGCTGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| CDS-3UTR GCA 90 bp | GACGCTCACATCTGGGGGTTGTCCTGTCCCCACGCCATCTCACTAGAGCATGCTGCACCCCGCGGCCGCTaGTCTCCTGGGGGCTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: DAHIWGLSCPHAISLEHAAPRGR*SPGGCL Trigger: CAAGCAGCCCCCAGGAGAGCAGCGGCCGCGGGGTGC...AGCATGCTCTAGTGAGATGGCGTGGGGACAGGACAACCCCCAGATGTGAGCGTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000108096.3 |
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| CDS-3UTR GCA 90 bp | CTCAGGGCTGGAGTCCAGGCTGCCCGAAGCAGAAAGGGCTTAGCTCTGGGATTACCGGCATCGCGGCGCTaGCGCCCAGGAACTGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LRAGVQAARSRKGLALGLPASRR*RPGTAH Trigger: GTGAGCAGTTCCTGGGCGGCAGCGCCGCGATGCCGG...TAATCCCAGAGCTAAGCCCTTTCTGCTTCGGGCAGCCTGGACTCCAGCCCTGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| CDS-3UTR GCA 90 bp | TCACATCTGGGGGTTGTCCTGTCCCCACGCCATCTCACTAGAGCATGCTGGGTCCCGGCATCGCGGCGCTaGCGCCCAGGAACTGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SHLGVVLSPRHLTRACWVPASRR*RPGTAH Trigger: GTGAGCAGTTCCTGGGCGGCAGCGCCGCGATGCCGG...GACCCAGCATGCTCTAGTGAGATGGCGTGGGGACAGGACAACCCCCAGATGTGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108096.3 |
||
| CDS-3UTR CCA 90 bp | TCAGACAGGGATCTGGAGACAGGCCACGTGAGTGAGAGTGCCCAGGCCCCTGCTGAGACTCCGACCAACTaGGGCAGGCGGCTCAGATCG | + |
|
Preference number: 4 (lower is better) Translates to: SDRDLETGHVSESAQAPAETPTN*GRRLRS Trigger: CGATCTGAGCCGCCTGCCCCAGTTGGTCGGAGTCTC...AGCAGGGGCCTGGGCACTCTCACTCACGTGGCCTGTCTCCAGATCCCTGTCTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| CDS-3UTR CCA 90 bp | GCTCACATCTGGGGGTTGTCCTGTCCCCACGCCATCTCACTAGAGCATGCTGGGGAGACTCCGACCAACTaGGGCAGGCGGCTCAGATCG | + |
|
Preference number: 4 (lower is better) Translates to: AHIWGLSCPHAISLEHAGETPTN*GRRLRS Trigger: CGATCTGAGCCGCCTGCCCCAGTTGGTCGGAGTCTC...CCCAGCATGCTCTAGTGAGATGGCGTGGGGACAGGACAACCCCCAGATGTGAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000108096.3 |
||
| CDS-3UTR TCA 90 bp | CATGAGGGCGTCAGTTCTTGGTGGCTGAGGGTCCTTCCACCCAGCCCACCTGGGATGATGGCCACCTTGTaGGGAGAGACACAGTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: HEGVSSWWLRVLPPSPPGMMATL*GETQSL Trigger: CAAGGACTGTGTCTCTCCTCACAAGGTGGCCATCAT...CCCAGGTGGGCTGGGTGGAAGGACCCTCAGCCACCAAGAACTGACGCCCTCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
||
| CDS-3UTR GCA 90 bp | TATCAACATACAAACACAGTATCACAGGTCTGGAACAGCCCAGTGGGCAGGGAGGCACCCCGCGGCCGCTaGTCTCCTGGGGGCTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: YQHTNTVSQVWNSPVGREAPRGR*SPGGCL Trigger: CAAGCAGCCCCCAGGAGAGCAGCGGCCGCGGGGTGC...CTCCCTGCCCACTGGGCTGTTCCAGACCTGTGATACTGTGTTTGTATGTTGATA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| CDS-3UTR CCA 90 bp | CTCAGGGCTGGAGTCCAGGCTGCCCGAAGCAGAAAGGGCTTAGCTCTGGGATTAGCGACAACAGTCCAGTaGTGGTGGGCACTGGCAACG | + |
|
Preference number: 4 (lower is better) Translates to: LRAGVQAARSRKGLALGLATTVQ*WWALAT Trigger: CGTTGCCAGTGCCCACCACCACTGGACTGTTGTCGC...TAATCCCAGAGCTAAGCCCTTTCTGCTTCGGGCAGCCTGGACTCCAGCCCTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
||
| CDS-3UTR CCA 90 bp | ATCTGGGGGTTGTCCTGTCCCCACGCCATCTCACTAGAGCATGCTGGGTCACAGGCGACAACAGTCCAGTaGTGGTGGGCACTGGCAACG | + |
|
Preference number: 4 (lower is better) Translates to: IWGLSCPHAISLEHAGSQATTVQ*WWALAT Trigger: CGTTGCCAGTGCCCACCACCACTGGACTGTTGTCGC...CTGTGACCCAGCATGCTCTAGTGAGATGGCGTGGGGACAGGACAACCCCCAGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108096.3 |
||
| CDS-3UTR CCA 90 bp | CATGAGGGCGTCAGTTCTTGGTGGCTGAGGGTCCTTCCACCCAGCCCACCTGGGCTGCCGGTTACGGAATaGGATGATGATGGCCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: HEGVSSWWLRVLPPSPPGLPVTE*DDDGHL Trigger: AAGGTGGCCATCATCATCCCATTCCGTAACCGGCAG...CCCAGGTGGGCTGGGTGGAAGGACCCTCAGCCACCAAGAACTGACGCCCTCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
||
| CDS-3UTR CCA 90 bp | TGCCCAGGCCCCTGCTCTGAGGGCAAGGCCTTGGAATCCACACACTACAGGACCAGTGGTGGTGGGCACTaGCAACGAAGACAAGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: CPGPCSEGKALESTHYRTSGGGH*QRRQVA Trigger: AGCAACTTGTCTTCGTTGCCAGTGCCCACCACCACT...GGTCCTGTAGTGTGTGGATTCCAAGGCCTTGCCCTCAGAGCAGGGGCCTGGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| CDS-3UTR CCA 90 bp | AGACGCTCACATCTGGGGGTTGTCCTGTCCCCACGCCATCTCACTAGAGCATGCACAACAGTCCAGTGGTaGTGGGCACTGGCAACGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RRSHLGVVLSPRHLTRACTTVQW*WALATK Trigger: CTTCGTTGCCAGTGCCCACCACCACTGGACTGTTGT...GCATGCTCTAGTGAGATGGCGTGGGGACAGGACAACCCCCAGATGTGAGCGTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108096.3 |
||
| CDS-3UTR TCA 90 bp | TCAGACAGGGATCTGGAGACAGGCCACGTGAGTGAGAGTGCCCAGGCCCCTGCTTCCTTCAAGGCCTCTTaGAAGCCAATATTGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SDRDLETGHVSESAQAPASFKAS*KPILSS Trigger: GCTGCTCAATATTGGCTTTCAAGAGGCCTTGAAGGA...AGCAGGGGCCTGGGCACTCTCACTCACGTGGCCTGTCTCCAGATCCCTGTCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| CDS-3UTR CCA 90 bp | CATGAGGGCGTCAGTTCTTGGTGGCTGAGGGTCCTTCCACCCAGCCCACCTGGGAACAGAAATGTGCCGTaGCTGCGAAAAACACCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: HEGVSSWWLRVLPPSPPGNRNVP*LRKTPV Trigger: TACAGGTGTTTTTCGCAGCCACGGCACATTTCTGTT...CCCAGGTGGGCTGGGTGGAAGGACCCTCAGCCACCAAGAACTGACGCCCTCATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| CDS-3UTR TCA 90 bp | GCTGGGTCACAGACGCATGCACTGCTTACAGCTAGCTCTCCATGGCTTGTGACGATGATGGCCACCTTGTaGGGAGAGACACAGTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: AGSQTHALLTASSPWLVTMMATL*GETQSL Trigger: CAAGGACTGTGTCTCTCCTCACAAGGTGGCCATCAT...CGTCACAAGCCATGGAGAGCTAGCTGTAAGCAGTGCATGCGTCTGTGACCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108096.3 |
||
| CDS-3UTR GCA 90 bp | CATAATGAGATGCAAGTCTTTGAAAATGAGACGCTCACATCTGGGGGTTGTCCTAGGGTGACGCCGAGGTaGAGCGCGCAGACGGCCACG | + |
|
Preference number: 4 (lower is better) Translates to: HNEMQVFENETLTSGGCPRVTPR*SAQTAT Trigger: CGTGGCCGTCTGCGCGCTGCACCTCGGCGTCACCCT...AGGACAACCCCCAGATGTGAGCGTCTCATTTTCAAAGACTTGCATCTCATTATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108096.3 |
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| CDS-3UTR GCA 90 bp | CAGGACCATAATGAGATGCAAGTCTTTGAAAATGAGACGCTCACATCTGGGGGTGCCGGGGCCAGAAGCTaGACCAGGGCTGGAGTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: QDHNEMQVFENETLTSGGAGARS*TRAGVE Trigger: CTCGACTCCAGCCCTGGTGCAGCTTCTGGCCCCGGC...ACCCCCAGATGTGAGCGTCTCATTTTCAAAGACTTGCATCTCATTATGGTCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000108096.3 |
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| CDS-3UTR GCA 90 bp | CCCCTTCTGTCCTCTAGTCCCCAGTGGCATCTCTTGGGCCAGGCTAATGCCCAACCCGAACTTGTCCATTaGAACAGAAATGTGCCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PLLSSSPQWHLLGQANAQPELVH*NRNVPW Trigger: CCACGGCACATTTCTGTTGCAATGGACAAGTTCGGG...TTGGGCATTAGCCTGGCCCAAGAGATGCCACTGGGGACTAGAGGACAGAAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
||
| CDS-3UTR GCA 90 bp | TCACCGCAGGCAGGCACAGAACACGGCCTGGCACAGGGCTCTGTGAATGACGACTTCTTGTCTCTTGAATaGCGGATCATTCGACACCTC | + |
|
Preference number: 4 (lower is better) Translates to: SPQAGTEHGLAQGSVNDDFLSLE*RIIRHL Trigger: GAGGTGTCGAATGATCCGGCATTCAAGAGACAAGAA...GTCGTCATTCACAGAGCCCTGTGCCAGGCCGTGTTCTGTGCCTGCCTGCGGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| CDS-3UTR CCA 90 bp | GGGTTGTCCTGTCCCCACGCCATCTCACTAGAGCATGCTGGGTCACAGACGCATGCTGGCGCTGAAGGATaGGATGCAAATAATACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GLSCPHAISLEHAGSQTHAGAEG*DANNTA Trigger: GGCTGTATTATTTGCATCCCATCCTTCAGCGCCAGC...ATGCGTCTGTGACCCAGCATGCTCTAGTGAGATGGCGTGGGGACAGGACAACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108096.3 |
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| 3UTR CAA 72 bp | GGAGACCCTGCCAGGCTAAAGGGTGGCACATTTCCTTaGCTTTCCTGTGCCTCTGATCTGTCCCAAAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GDPARLKGGTFP*LSCASDLSQRP Trigger: TGGCCTTTGGGACAGATCAGAGGCACAGGAAAGCAAAGGAAATGTGCCACCCTTTAGCCTGGCAGGGTCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| CDS-3UTR TCA 90 bp | AGACGCTCACATCTGGGGGTTGTCCTGTCCCCACGCCATCTCACTAGAGCATGCTCCTTCAAGGCCTCTTaGAAGCCAATATTGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RRSHLGVVLSPRHLTRACSFKAS*KPILSS Trigger: GCTGCTCAATATTGGCTTTCAAGAGGCCTTGAAGGA...GCATGCTCTAGTGAGATGGCGTGGGGACAGGACAACCCCCAGATGTGAGCGTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108096.3 |
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| CDS-3UTR TCA 90 bp | CTAGTCCCCAGTGGCATCTCTTGGGCCAGGCTAATGCCCAAGCCTAACGGTGCCGAAACTGTTGTTTACTaGGAGCAGAGACACCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LVPSGISWARLMPKPNGAETVVY*EQRHLQ Trigger: TTGGAGGTGTCTCTGCTCTCAGTAAACAACAGTTTC...GGCACCGTTAGGCTTGGGCATTAGCCTGGCCCAAGAGATGCCACTGGGGACTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| CDS-3UTR TCA 90 bp | CATGAGGGCGTCAGTTCTTGGTGGCTGAGGGTCCTTCCACCCAGCCCACCTGGGATTTTTCTTGTCTCTTaGATGCCGGATCATTCGACA | + |
|
Preference number: 4 (lower is better) Translates to: HEGVSSWWLRVLPPSPPGIFLVS*MPDHST Trigger: TGTCGAATGATCCGGCATTCAAGAGACAAGAAAAAT...CCCAGGTGGGCTGGGTGGAAGGACCCTCAGCCACCAAGAACTGACGCCCTCATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| CDS-3UTR GCA 90 bp | CCCCTTCTGTCCTCTAGTCCCCAGTGGCATCTCTTGGGCCAGGCTAATGCCCAACTCTGGGTTCTTCTTTaGCAAAAGCTCCAGATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PLLSSSPQWHLLGQANAQLWVLL*QKLQIH Trigger: GTGGATCTGGAGCTTTTGGCAAAGAAGAACCCAGAG...TTGGGCATTAGCCTGGCCCAAGAGATGCCACTGGGGACTAGAGGACAGAAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| CDS-3UTR GCA 90 bp | CGCTCACATCTGGGGGTTGTCCTGTCCCCACGCCATCTCACTAGAGCATGCTGGATTGCAACAGAAATGTaGCGTGGCTGCGAAAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: RSHLGVVLSPRHLTRACWIATEM*RGCEKH Trigger: GTGTTTTTCGCAGCCACGGCACATTTCTGTTGCAAT...CCAGCATGCTCTAGTGAGATGGCGTGGGGACAGGACAACCCCCAGATGTGAGCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000108096.3 |
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| CDS-3UTR CCA 90 bp | ATCTGGGGGTTGTCCTGTCCCCACGCCATCTCACTAGAGCATGCTGGGTCACAGGCCCGTCTTTATCTCTaGGTTCTTCTTTGCCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: IWGLSCPHAISLEHAGSQARLYL*VLLCQK Trigger: CTTTTGGCAAAGAAGAACCCAGAGATAAAGACGGGC...CTGTGACCCAGCATGCTCTAGTGAGATGGCGTGGGGACAGGACAACCCCCAGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000108096.3 |
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| CDS-3UTR CCA 90 bp | CTAGTCCCCAGTGGCATCTCTTGGGCCAGGCTAATGCCCAAGCCTAACGGTGCCCAAACCTCTGAGGATTaGGCTCATTTTTCTTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LVPSGISWARLMPKPNGAQTSED*AHFSCL Trigger: GAGACAAGAAAAATGAGCCCAATCCTCAGAGGTTTG...GGCACCGTTAGGCTTGGGCATTAGCCTGGCCCAAGAGATGCCACTGGGGACTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| CDS-3UTR CCA 90 bp | TGCCCAGGCCCCTGCTCTGAGGGCAAGGCCTTGGAATCCACACACTACAGGACCATGTCCACTGTGATTTaGGTATATAACGGGTATCTC | + |
|
Preference number: 4 (lower is better) Translates to: CPGPCSEGKALESTHYRTMSTVI*VYNGYL Trigger: GAGATACCCGTTATATACCCAAATCACAGTGGACAT...GGTCCTGTAGTGTGTGGATTCCAAGGCCTTGCCCTCAGAGCAGGGGCCTGGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| CDS-3UTR CCA 90 bp | TATCAACATACAAACACAGTATCACAGGTCTGGAACAGCCCAGTGGGCAGGGAGACAGTCCAGTGGTGGTaGGCACTGGCAACGAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: YQHTNTVSQVWNSPVGRETVQWW*ALATKT Trigger: TGTCTTCGTTGCCAGTGCCCACCACCACTGGACTGT...CTCCCTGCCCACTGGGCTGTTCCAGACCTGTGATACTGTGTTTGTATGTTGATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
||
| CDS-3UTR CCA 90 bp | TATCAACATACAAACACAGTATCACAGGTCTGGAACAGCCCAGTGGGCAGGGAGACAACAGTCCAGTGGTaGTGGGCACTGGCAACGAAG | + |
|
Preference number: 4 (lower is better) Translates to: YQHTNTVSQVWNSPVGRETTVQW*WALATK Trigger: CTTCGTTGCCAGTGCCCACCACCACTGGACTGTTGT...CTCCCTGCCCACTGGGCTGTTCCAGACCTGTGATACTGTGTTTGTATGTTGATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| CDS-3UTR TCA 90 bp | TGCCCAAGCCTAACGGTGCCTTGGGCTGGAGGTTCCCCAAAGGATGCTGAAAGGTACAGCATTTGGACGTaGTATAGACATGCCTTTATG | + |
|
Preference number: 4 (lower is better) Translates to: CPSLTVPWAGGSPKDAERYSIWT*YRHAFM Trigger: CATAAAGGCATGTCTATATCACGTCCAAATGCTGTA...CCTTTCAGCATCCTTTGGGGAACCTCCAGCCCAAGGCACCGTTAGGCTTGGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| CDS-3UTR CCA 90 bp | GGCACATTTCCTTTGCTTTCCTGTGCCTCTGATCTGTCCCAAAGGCCACACTATGCTGGCGCTGAAGGATaGGATGCAAATAATACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GTFPLLSCASDLSQRPHYAGAEG*DANNTA Trigger: GGCTGTATTATTTGCATCCCATCCTTCAGCGCCAGC...ATAGTGTGGCCTTTGGGACAGATCAGAGGCACAGGAAAGCAAAGGAAATGTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| CDS-3UTR TCA 90 bp | GGCACATTTCCTTTGCTTTCCTGTGCCTCTGATCTGTCCCAAAGGCCACACTATTCCCGATGTCCACTGTaGTTTGGGTATATAACGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GTFPLLSCASDLSQRPHYSRCPL*FGYITG Trigger: ACCCGTTATATACCCAAATCACAGTGGACATCGGGA...ATAGTGTGGCCTTTGGGACAGATCAGAGGCACAGGAAAGCAAAGGAAATGTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| CDS-3UTR CCA 90 bp | CAGGACCATAATGAGATGCAAGTCTTTGAAAATGAGACGCTCACATCTGGGGGTAGTGGTGGTGGGCACTaGCAACGAAGACAAGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QDHNEMQVFENETLTSGGSGGGH*QRRQVA Trigger: AGCAACTTGTCTTCGTTGCCAGTGCCCACCACCACT...ACCCCCAGATGTGAGCGTCTCATTTTCAAAGACTTGCATCTCATTATGGTCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108096.3 |
||
| CDS-3UTR GCA 90 bp | TATCAACATACAAACACAGTATCACAGGTCTGGAACAGCCCAGTGGGCAGGGAGATTGCAACAGAAATGTaGCGTGGCTGCGAAAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: YQHTNTVSQVWNSPVGREIATEM*RGCEKH Trigger: GTGTTTTTCGCAGCCACGGCACATTTCTGTTGCAAT...CTCCCTGCCCACTGGGCTGTTCCAGACCTGTGATACTGTGTTTGTATGTTGATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
||
| CDS-3UTR GCA 90 bp | CAGGACCATAATGAGATGCAAGTCTTTGAAAATGAGACGCTCACATCTGGGGGTCCCGAACTTGTCCATTaGAACAGAAATGTGCCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QDHNEMQVFENETLTSGGPELVH*NRNVPW Trigger: CCACGGCACATTTCTGTTGCAATGGACAAGTTCGGG...ACCCCCAGATGTGAGCGTCTCATTTTCAAAGACTTGCATCTCATTATGGTCCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108096.3 |
||
| CDS-3UTR CCA 90 bp | ATAATGAGATGCAAGTCTTTGAAAATGAGACGCTCACATCTGGGGGTTGTCCTGCTGCCGGTTACGGAATaGGATGATGATGGCCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: IMRCKSLKMRRSHLGVVLLPVTE*DDDGHL Trigger: AAGGTGGCCATCATCATCCCATTCCGTAACCGGCAG...CAGGACAACCCCCAGATGTGAGCGTCTCATTTTCAAAGACTTGCATCTCATTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108096.3 |
||
| CDS-3UTR TCA 90 bp | GGCACATTTCCTTTGCTTTCCTGTGCCTCTGATCTGTCCCAAAGGCCACACTATACACCTCCAAAATACTaGACATATGGCAGGCTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: GTFPLLSCASDLSQRPHYTPPKY*TYGRLN Trigger: GTTTAGCCTGCCATATGTTCAGTATTTTGGAGGTGT...ATAGTGTGGCCTTTGGGACAGATCAGAGGCACAGGAAAGCAAAGGAAATGTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
||
| CDS-3UTR GCA 90 bp | ATAATGAGATGCAAGTCTTTGAAAATGAGACGCTCACATCTGGGGGTTGTCCTGCTCTGGGTTCTTCTTTaGCAAAAGCTCCAGATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: IMRCKSLKMRRSHLGVVLLWVLL*QKLQIH Trigger: GTGGATCTGGAGCTTTTGGCAAAGAAGAACCCAGAG...CAGGACAACCCCCAGATGTGAGCGTCTCATTTTCAAAGACTTGCATCTCATTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000108096.3 |
||
| CDS-3UTR TCA 90 bp | CATAATGAGATGCAAGTCTTTGAAAATGAGACGCTCACATCTGGGGGTTGTCCTGAAACTGTTGTTTACTaGGAGCAGAGACACCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: HNEMQVFENETLTSGGCPETVVY*EQRHLQ Trigger: TTGGAGGTGTCTCTGCTCTCAGTAAACAACAGTTTC...AGGACAACCCCCAGATGTGAGCGTCTCATTTTCAAAGACTTGCATCTCATTATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108096.3 |
||
| CDS-3UTR TCA 90 bp | GTATCTGACATGAACAAAACCCAACACGAACAGCATAGAGAAAAGGCAGAGGTTCACCTTGTAGGTAAGTaGGTTCAAACCATCGAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: VSDMNKTQHEQHREKAEVHLVGK*VQTIEA Trigger: CGCTTCGATGGTTTGAACTCACTTACCTACAAGGTG...AACCTCTGCCTTTTCTCTATGCTGTTCGTGTTGGGTTTTGTTCATGTCAGATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
||
| CDS-3UTR CCA 90 bp | CATAATGAGATGCAAGTCTTTGAAAATGAGACGCTCACATCTGGGGGTTGTCCTAACAGAAATGTGCCGTaGCTGCGAAAAACACCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: HNEMQVFENETLTSGGCPNRNVP*LRKTPV Trigger: TACAGGTGTTTTTCGCAGCCACGGCACATTTCTGTT...AGGACAACCCCCAGATGTGAGCGTCTCATTTTCAAAGACTTGCATCTCATTATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000108096.3 |
||
| CDS-3UTR CCA 90 bp | CTAAGAAAAGACACACACACAGTGATTGTAATAGTCGCATACCGATGTAAAGGGGCCCGTCTTTATCTCTaGGTTCTTCTTTGCCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LRKDTHTVIVIVAYRCKGARLYL*VLLCQK Trigger: CTTTTGGCAAAGAAGAACCCAGAGATAAAGACGGGC...CCCTTTACATCGGTATGCGACTATTACAATCACTGTGTGTGTGTCTTTTCTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
||
| CDS GCA 90 bp | GGAGGCGGCGGCCGCGCACCCCGCGGCCGCTGCTCTCCTGGGGGCTaGTTGCTGGCTGCGGCGCCGTTCGTGCCGCCCTGCAGTGTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: GGGGRAPRGRCSPGG*LLAAAPFVPPCSVE Trigger: CTCTACACTGCAGGGCGGCACGAACGGCGCCGCAGCCAGCAAGCAGCCCCCAGGAGAGCAGCGGCCGCGGGGTGCGCGGCCGCCGCCTCC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030121.13 ENSMUST00000108096.3 |
||
| CDS GCA 90 bp | CCGCGCACCCCGCGGCCGCTGCTCTCCTGGGGGCTGCTTGCTGGCTaGGGCGCCGTTCGTGCCGCCCTGCAGTGTAGAGGAGACTCCGAC | + |
|
Preference number: 5 (lower is better) Translates to: PRTPRPLLSWGLLAG*GAVRAALQCRGDSD Trigger: GTCGGAGTCTCCTCTACACTGCAGGGCGGCACGAACGGCGCCGCAGCCAGCAAGCAGCCCCCAGGAGAGCAGCGGCCGCGGGGTGCGCGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030121.13 ENSMUST00000108096.3 |
||
| CDS GCA 90 bp | TCTCCTGGGGGCTGCTTGCTGGCTGCGGCGCCGTTCGTGCCGCCCTaGAGTGTAGAGGAGACTCCGACCAACTGGGGCAGGCGGCTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SPGGCLLAAAPFVPP*SVEETPTNWGRRLR Trigger: TCTGAGCCGCCTGCCCCAGTTGGTCGGAGTCTCCTCTACACTGCAGGGCGGCACGAACGGCGCCGCAGCCAGCAAGCAGCCCCCAGGAGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030121.13 ENSMUST00000108096.3 |
||
| CDS-3UTR CAA 90 bp | TCAGACAGGGATCTGGAGACAGGCCACGTGAGTGAGAGTGCCCAGGCCCCTGCTTCTCCTGGGGGCTGCTaGCTGGCTGCGGCGCCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SDRDLETGHVSESAQAPASPGGC*LAAAPF Trigger: GAACGGCGCCGCAGCCAGCAAGCAGCCCCCAGGAGA...AGCAGGGGCCTGGGCACTCTCACTCACGTGGCCTGTCTCCAGATCCCTGTCTGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
||
| CDS CCA 90 bp | AAGACAAGTTGCTCTTCAAGCCGGGGCCAGAAGCTGCACCAGGGCTaGAGTCGAGACCCGGGCGAGGCTTCGGGGAGACGCCTAAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: KTSCSSSRGQKLHQG*SRDPGEASGRRLKE Trigger: CTCCTTTAGGCGTCTCCCCGAAGCCTCGCCCGGGTCTCGACTCCAGCCCTGGTGCAGCTTCTGGCCCCGGCTTGAAGAGCAACTTGTCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030121.13 ENSMUST00000108096.3 |
||
| CDS CCA 90 bp | GCGGGGACTCCTCAGGGCAAGCTGGCAGCGACAACAGTCCAGTGGTaGTGGGCACTGGCAACGAAGACAAGTTGCTCTTCAAGCCGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: AGTPQGKLAATTVQW*WALATKTSCSSSRG Trigger: GCCCCGGCTTGAAGAGCAACTTGTCTTCGTTGCCAGTGCCCACCACCACTGGACTGTTGTCGCTGCCAGCTTGCCCTGAGGAGTCCCCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030121.13 ENSMUST00000108096.3 |
||
| CDS CCA 90 bp | GCAGCGGGGACTCCTCAGGGCAAGCTGGCAGCGACAACAGTCCAGTaGTGGTGGGCACTGGCAACGAAGACAAGTTGCTCTTCAAGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: AAGTPQGKLAATTVQ*WWALATKTSCSSSR Trigger: CCGGCTTGAAGAGCAACTTGTCTTCGTTGCCAGTGCCCACCACCACTGGACTGTTGTCGCTGCCAGCTTGCCCTGAGGAGTCCCCGCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030121.13 ENSMUST00000108096.3 |
||
| CDS CCA 90 bp | AATCAGCATGGGGCCAACGAGCAGCGGGGACTCCTCAGGGCAAGCTaGCAGCGACAACAGTCCAGTGGTGGTGGGCACTGGCAACGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: NQHGANEQRGLLRAS*QRQQSSGGGHWQRR Trigger: TCTTCGTTGCCAGTGCCCACCACCACTGGACTGTTGTCGCTGCCAGCTTGCCCTGAGGAGTCCCCGCTGCTCGTTGGCCCCATGCTGATT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030121.13 ENSMUST00000108096.3 |
||
| CDS CCA 90 bp | CTCAGGGCAAGCTGGCAGCGACAACAGTCCAGTGGTGGTGGGCACTaGCAACGAAGACAAGTTGCTCTTCAAGCCGGGGCCAGAAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LRASWQRQQSSGGGH*QRRQVALQAGARSC Trigger: GCAGCTTCTGGCCCCGGCTTGAAGAGCAACTTGTCTTCGTTGCCAGTGCCCACCACCACTGGACTGTTGTCGCTGCCAGCTTGCCCTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030121.13 ENSMUST00000108096.3 |
||
| CDS-3UTR CAA 90 bp | CGCTCACATCTGGGGGTTGTCCTGTCCCCACGCCATCTCACTAGAGCATGCTGGGGCAACGAAGACAAGTaGCTCTTCAAGCCGGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: RSHLGVVLSPRHLTRACWGNEDK*LFKPGP Trigger: TGGCCCCGGCTTGAAGAGCAACTTGTCTTCGTTGCC...CCAGCATGCTCTAGTGAGATGGCGTGGGGACAGGACAACCCCCAGATGTGAGCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000108096.3 |
||
| CDS-3UTR CAA 90 bp | CCCCTTCTGTCCTCTAGTCCCCAGTGGCATCTCTTGGGCCAGGCTAATGCCCAAGATGCCATAGTCGAGTaGCTGGCGCTGAAGGATGGG | + |
|
Preference number: 5 (lower is better) Translates to: PLLSSSPQWHLLGQANAQDAIVE*LALKDG Trigger: CCCATCCTTCAGCGCCAGCAACTCGACTATGGCATC...TTGGGCATTAGCCTGGCCCAAGAGATGCCACTGGGGACTAGAGGACAGAAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
||
| CDS-3UTR CAA 90 bp | CCCCTTCTGTCCTCTAGTCCCCAGTGGCATCTCTTGGGCCAGGCTAATGCCCAAAGCAGCTTAGCTCGATaGAACATGGTGTCTCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PLLSSSPQWHLLGQANAQSSLAR*NMVSPA Trigger: GGCTGGAGACACCATGTTCAATCGAGCTAAGCTGCT...TTGGGCATTAGCCTGGCCCAAGAGATGCCACTGGGGACTAGAGGACAGAAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
||
| CDS-3UTR CAA 90 bp | TGCCCAGGCCCCTGCTCTGAGGGCAAGGCCTTGGAATCCACACACTACAGGACCGTCCTTCAAGGCCTCTaGAAAGCCAATATTGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: CPGPCSEGKALESTHYRTVLQGL*KANIEQ Trigger: CTGCTCAATATTGGCTTTCAAGAGGCCTTGAAGGAC...GGTCCTGTAGTGTGTGGATTCCAAGGCCTTGCCCTCAGAGCAGGGGCCTGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
||
| CDS-3UTR CAA 90 bp | ATAATGAGATGCAAGTCTTTGAAAATGAGACGCTCACATCTGGGGGTTGTCCTGTCTCCTGGGGGCTGCTaGCTGGCTGCGGCGCCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: IMRCKSLKMRRSHLGVVLSPGGC*LAAAPF Trigger: GAACGGCGCCGCAGCCAGCAAGCAGCCCCCAGGAGA...CAGGACAACCCCCAGATGTGAGCGTCTCATTTTCAAAGACTTGCATCTCATTAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000108096.3 |
||
| CDS-3UTR CAA 90 bp | GCTGGGTCACAGACGCATGCACTGCTTACAGCTAGCTCTCCATGGCTTGTGACGAGCAGCTTAGCTCGATaGAACATGGTGTCTCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: AGSQTHALLTASSPWLVTSSLAR*NMVSPA Trigger: GGCTGGAGACACCATGTTCAATCGAGCTAAGCTGCT...CGTCACAAGCCATGGAGAGCTAGCTGTAAGCAGTGCATGCGTCTGTGACCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108096.3 |
||
| CDS-3UTR CAA 90 bp | TCACCGCAGGCAGGCACAGAACACGGCCTGGCACAGGGCTCTGTGAATGACGACGATGGCAAGAAACTGTaGTTTACTGAGAGCAGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: SPQAGTEHGLAQGSVNDDDGKKL*FTESRD Trigger: GTCTCTGCTCTCAGTAAACAACAGTTTCTTGCCATC...GTCGTCATTCACAGAGCCCTGTGCCAGGCCGTGTTCTGTGCCTGCCTGCGGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
||
| CDS-3UTR CAA 90 bp | TGCCCAAGCCTAACGGTGCCTTGGGCTGGAGGTTCCCCAAAGGATGCTGAAAGGTCTCTGGGTTCTTCTTaGCCAAAAGCTCCAGATCCA | + |
|
Preference number: 5 (lower is better) Translates to: CPSLTVPWAGGSPKDAERSLGSS*PKAPDP Trigger: TGGATCTGGAGCTTTTGGCAAAGAAGAACCCAGAGA...CCTTTCAGCATCCTTTGGGGAACCTCCAGCCCAAGGCACCGTTAGGCTTGGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
||
| CDS-3UTR CAA 90 bp | TATCAACATACAAACACAGTATCACAGGTCTGGAACAGCCCAGTGGGCAGGGAGGGCAACGAAGACAAGTaGCTCTTCAAGCCGGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: YQHTNTVSQVWNSPVGREGNEDK*LFKPGP Trigger: TGGCCCCGGCTTGAAGAGCAACTTGTCTTCGTTGCC...CTCCCTGCCCACTGGGCTGTTCCAGACCTGTGATACTGTGTTTGTATGTTGATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
||
| CDS-3UTR CAA 90 bp | TGCCCAAGCCTAACGGTGCCTTGGGCTGGAGGTTCCCCAAAGGATGCTGAAAGGTTGGGCTCATTTTTCTaGTCTCTTGAATGCCGGATC | + |
|
Preference number: 5 (lower is better) Translates to: CPSLTVPWAGGSPKDAERLGSFF*SLECRI Trigger: GATCCGGCATTCAAGAGACAAGAAAAATGAGCCCAA...CCTTTCAGCATCCTTTGGGGAACCTCCAGCCCAAGGCACCGTTAGGCTTGGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
||
| CDS-3UTR CAA 90 bp | ATCTGGGGGTTGTCCTGTCCCCACGCCATCTCACTAGAGCATGCTGGGTCACAGTCCTCAGCCGATGCTTaGGGTTTGCTTCTGTTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: IWGLSCPHAISLEHAGSQSSADA*GLLLLK Trigger: TTTTAACAGAAGCAAACCCAAAGCATCGGCTGAGGA...CTGTGACCCAGCATGCTCTAGTGAGATGGCGTGGGGACAGGACAACCCCCAGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108096.3 |
||
| CDS CCA 90 bp | TGGCAGGCTAAACCCGAACTTGTCCATTGCAACAGAAATGTGCCGTaGCTGCGAAAAACACCTGTAGGCATTACGGTCGTCCATCGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: WQAKPELVHCNRNVP*LRKTPVGITVVHRN Trigger: ATTCCGATGGACGACCGTAATGCCTACAGGTGTTTTTCGCAGCCACGGCACATTTCTGTTGCAATGGACAAGTTCGGGTTTAGCCTGCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030121.13 ENSMUST00000108096.3 |
||
| CDS CCA 90 bp | CAAATAATACAGCCAGTATTTGAGATGCTCCTGCCGGTTACGGAATaGGATGATGATGGCCACCTTGTGAGGAGAGACACAGTCCTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: QIIQPVFEMLLPVTE*DDDGHLVRRDTVLG Trigger: CCCAAGGACTGTGTCTCTCCTCACAAGGTGGCCATCATCATCCCATTCCGTAACCGGCAGGAGCATCTCAAATACTGGCTGTATTATTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030121.13 ENSMUST00000108096.3 |
||
| CDS-3UTR CAA 90 bp | ATAATGAGATGCAAGTCTTTGAAAATGAGACGCTCACATCTGGGGGTTGTCCTGGATGCCATAGTCGAGTaGCTGGCGCTGAAGGATGGG | + |
|
Preference number: 5 (lower is better) Translates to: IMRCKSLKMRRSHLGVVLDAIVE*LALKDG Trigger: CCCATCCTTCAGCGCCAGCAACTCGACTATGGCATC...CAGGACAACCCCCAGATGTGAGCGTCTCATTTTCAAAGACTTGCATCTCATTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108096.3 |
||
| CDS-3UTR CAA 90 bp | TATCAACATACAAACACAGTATCACAGGTCTGGAACAGCCCAGTGGGCAGGGAGACCCGAACTTGTCCATaGCAACAGAAATGTGCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: YQHTNTVSQVWNSPVGRETRTCP*QQKCAV Trigger: CACGGCACATTTCTGTTGCAATGGACAAGTTCGGGT...CTCCCTGCCCACTGGGCTGTTCCAGACCTGTGATACTGTGTTTGTATGTTGATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
||
| CDS-3UTR CAA 90 bp | ATCTGGGGGTTGTCCTGTCCCCACGCCATCTCACTAGAGCATGCTGGGTCACAGTTATTAGGGAATCCATaGATGGCAAGAAACTGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: IWGLSCPHAISLEHAGSQLLGNP*MARNCC Trigger: ACAACAGTTTCTTGCCATCAATGGATTCCCTAATAA...CTGTGACCCAGCATGCTCTAGTGAGATGGCGTGGGGACAGGACAACCCCCAGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108096.3 |
||
| CDS TCA 90 bp | GATCCGGTCAAACCTCTGAGGATTGGGCTCATTTTTCTTGTCTCTTaGATGCCGGATCATTCGACACCTCCCTACTACAGCATTTGGACG | + |
|
Preference number: 5 (lower is better) Translates to: DPVKPLRIGLIFLVS*MPDHSTPPYYSIWT Trigger: CGTCCAAATGCTGTAGTAGGGAGGTGTCGAATGATCCGGCATTCAAGAGACAAGAAAAATGAGCCCAATCCTCAGAGGTTTGACCGGATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
||
| CDS CCA 90 bp | AGAGACACAGTCCTTGGGGGAGTAACGGCCGCCCGTCTTTATCTCTaGGTTCTTCTTTGCCAAAAGCTCCAGATCCACAGCAATATTAAA | + |
|
Preference number: 5 (lower is better) Translates to: RDTVLGGVTAARLYL*VLLCQKLQIHSNIK Trigger: TTTAATATTGCTGTGGATCTGGAGCTTTTGGCAAAGAAGAACCCAGAGATAAAGACGGGCGGCCGTTACTCCCCCAAGGACTGTGTCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030121.13 ENSMUST00000108096.3 |
||
| CDS GCA 90 bp | CTTGGGGGAGTAACGGCCGCCCGTCTTTATCTCTGGGTTCTTCTTTaGCAAAAGCTCCAGATCCACAGCAATATTAAAGTCAATCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: LGGVTAARLYLWVLL*QKLQIHSNIKVNQH Trigger: ATGCTGATTGACTTTAATATTGCTGTGGATCTGGAGCTTTTGGCAAAGAAGAACCCAGAGATAAAGACGGGCGGCCGTTACTCCCCCAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030121.13 ENSMUST00000108096.3 |
||
| CDS-3UTR CAA 90 bp | ATAATGAGATGCAAGTCTTTGAAAATGAGACGCTCACATCTGGGGGTTGTCCTGACCCGAACTTGTCCATaGCAACAGAAATGTGCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: IMRCKSLKMRRSHLGVVLTRTCP*QQKCAV Trigger: CACGGCACATTTCTGTTGCAATGGACAAGTTCGGGT...CAGGACAACCCCCAGATGTGAGCGTCTCATTTTCAAAGACTTGCATCTCATTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108096.3 |
||
| CDS-3UTR CAA 90 bp | TATCAACATACAAACACAGTATCACAGGTCTGGAACAGCCCAGTGGGCAGGGAGCATTTTTCTTGTCTCTaGAATGCCGGATCATTCGAC | + |
|
Preference number: 5 (lower is better) Translates to: YQHTNTVSQVWNSPVGREHFSCL*NAGSFD Trigger: GTCGAATGATCCGGCATTCAAGAGACAAGAAAAATG...CTCCCTGCCCACTGGGCTGTTCCAGACCTGTGATACTGTGTTTGTATGTTGATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
||
| CDS-3UTR CAA 90 bp | ATCAGGACCATAATGAGATGCAAGTCTTTGAAAATGAGACGCTCACATCTGGGGGTCCTTCAAGGCCTCTaGAAAGCCAATATTGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: IRTIMRCKSLKMRRSHLGVLQGL*KANIEQ Trigger: CTGCTCAATATTGGCTTTCAAGAGGCCTTGAAGGAC...CCCCAGATGTGAGCGTCTCATTTTCAAAGACTTGCATCTCATTATGGTCCTGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108096.3 |
||
| CDS-3UTR CAA 90 bp | CAGGACCATAATGAGATGCAAGTCTTTGAAAATGAGACGCTCACATCTGGGGGTGATGGCAAGAAACTGTaGTTTACTGAGAGCAGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: QDHNEMQVFENETLTSGGDGKKL*FTESRD Trigger: GTCTCTGCTCTCAGTAAACAACAGTTTCTTGCCATC...ACCCCCAGATGTGAGCGTCTCATTTTCAAAGACTTGCATCTCATTATGGTCCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108096.3 |
||
| CDS-3UTR CAA 90 bp | TATCAACATACAAACACAGTATCACAGGTCTGGAACAGCCCAGTGGGCAGGGAGTTATTAGGGAATCCATaGATGGCAAGAAACTGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: YQHTNTVSQVWNSPVGRELLGNP*MARNCC Trigger: ACAACAGTTTCTTGCCATCAATGGATTCCCTAATAA...CTCCCTGCCCACTGGGCTGTTCCAGACCTGTGATACTGTGTTTGTATGTTGATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
||
| CDS-3UTR CAA 90 bp | CATAATGAGATGCAAGTCTTTGAAAATGAGACGCTCACATCTGGGGGTTGTCCTGCCGATGCTTTGGGTTaGCTTCTGTTAAAAATGTCG | + |
|
Preference number: 5 (lower is better) Translates to: HNEMQVFENETLTSGGCPADALG*LLLKMS Trigger: CGACATTTTTAACAGAAGCAAACCCAAAGCATCGGC...AGGACAACCCCCAGATGTGAGCGTCTCATTTTCAAAGACTTGCATCTCATTATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000108096.3 |
||
| CDS TCA 90 bp | GCAAGAAACTGTTGTTTACTGAGAGCAGAGACACCTCCAAAATACTaGACATATGGCAGGCTAAACCCGAACTTGTCCATTGCAACAGAA | + |
|
Preference number: 5 (lower is better) Translates to: ARNCCLLRAETPPKY*TYGRLNPNLSIATE Trigger: TTCTGTTGCAATGGACAAGTTCGGGTTTAGCCTGCCATATGTTCAGTATTTTGGAGGTGTCTCTGCTCTCAGTAAACAACAGTTTCTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030121.13 ENSMUST00000108096.3 |
||
| CDS CAA 90 bp | GGCGGCGGCCGCGCACCCCGCGGCCGCTGCTCTCCTGGGGGCTGCTaGCTGGCTGCGGCGCCGTTCGTGCCGCCCTGCAGTGTAGAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: GGGRAPRGRCSPGGC*LAAAPFVPPCSVEE Trigger: CTCCTCTACACTGCAGGGCGGCACGAACGGCGCCGCAGCCAGCAAGCAGCCCCCAGGAGAGCAGCGGCCGCGGGGTGCGCGGCCGCCGCC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030121.13 ENSMUST00000108096.3 |
||
| CDS GCA 72 bp | GGCTGCTTGCTGGCTGCGGCGCCGTTCGTGCCGCCCTaGAGTGTAGAGGAGACTCCGACCAACTGGGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GCLLAAAPFVPP*SVEETPTNWGR Trigger: CCTGCCCCAGTTGGTCGGAGTCTCCTCTACACTGCAGGGCGGCACGAACGGCGCCGCAGCCAGCAAGCAGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030121.13 ENSMUST00000108096.3 |
||
| CDS CCA 72 bp | TGCTCTTCAAGCCGGGGCCAGAAGCTGCACCAGGGCTaGAGTCGAGACCCGGGCGAGGCTTCGGGGAGACGC | + |
|
Preference number: 6 (lower is better) Translates to: CSSSRGQKLHQG*SRDPGEASGRR Trigger: GCGTCTCCCCGAAGCCTCGCCCGGGTCTCGACTCCAGCCCTGGTGCAGCTTCTGGCCCCGGCTTGAAGAGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030121.13 ENSMUST00000108096.3 |
||
| CDS CCA 72 bp | GGGGCCAACGAGCAGCGGGGACTCCTCAGGGCAAGCTaGCAGCGACAACAGTCCAGTGGTGGTGGGCACTGG | + |
|
Preference number: 6 (lower is better) Translates to: GANEQRGLLRAS*QRQQSSGGGHW Trigger: CCAGTGCCCACCACCACTGGACTGTTGTCGCTGCCAGCTTGCCCTGAGGAGTCCCCGCTGCTCGTTGGCCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030121.13 ENSMUST00000108096.3 |
||
| CDS TCA 72 bp | GGCTCAGATCGCGGCCAGAGAGGTAATAGACGAGGGTaGCGCCGAGGTGCAGCGCGCAGACGGCCACGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: GSDRGQRGNRRG*RRGAARRRPRA Trigger: TGCTCGTGGCCGTCTGCGCGCTGCACCTCGGCGTCACCCTCGTCTATTACCTCTCTGGCCGCGATCTGAGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030121.13 ENSMUST00000108096.3 |
||
| CDS CAA 72 bp | AGTCCAGTGGTGGTGGGCACTGGCAACGAAGACAAGTaGCTCTTCAAGCCGGGGCCAGAAGCTGCACCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SPVVVGTGNEDK*LFKPGPEAAPG Trigger: CCCTGGTGCAGCTTCTGGCCCCGGCTTGAAGAGCAACTTGTCTTCGTTGCCAGTGCCCACCACCACTGGACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030121.13 ENSMUST00000108096.3 |
||
| CDS CCA 72 bp | CAGGGCAAGCTGGCAGCGACAACAGTCCAGTGGTGGTaGGCACTGGCAACGAAGACAAGTTGCTCTTCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: QGKLAATTVQWW*ALATKTSCSSS Trigger: GCTTGAAGAGCAACTTGTCTTCGTTGCCAGTGCCCACCACCACTGGACTGTTGTCGCTGCCAGCTTGCCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030121.13 ENSMUST00000108096.3 |
||
| CDS CCA 72 bp | ACTCCTCAGGGCAAGCTGGCAGCGACAACAGTCCAGTaGTGGTGGGCACTGGCAACGAAGACAAGTTGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: TPQGKLAATTVQ*WWALATKTSCS Trigger: AGAGCAACTTGTCTTCGTTGCCAGTGCCCACCACCACTGGACTGTTGTCGCTGCCAGCTTGCCCTGAGGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030121.13 ENSMUST00000108096.3 |
||
| CDS CCA 72 bp | GTCCTTGGGGGAGTAACGGCCGCCCGTCTTTATCTCTaGGTTCTTCTTTGCCAAAAGCTCCAGATCCACAGC | + |
|
Preference number: 6 (lower is better) Translates to: VLGGVTAARLYL*VLLCQKLQIHS Trigger: GCTGTGGATCTGGAGCTTTTGGCAAAGAAGAACCCAGAGATAAAGACGGGCGGCCGTTACTCCCCCAAGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030121.13 ENSMUST00000108096.3 |
||
| CDS CCA 72 bp | CAGCCAGTATTTGAGATGCTCCTGCCGGTTACGGAATaGGATGATGATGGCCACCTTGTGAGGAGAGACACA | + |
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Preference number: 6 (lower is better) Translates to: QPVFEMLLPVTE*DDDGHLVRRDT Trigger: TGTGTCTCTCCTCACAAGGTGGCCATCATCATCCCATTCCGTAACCGGCAGGAGCATCTCAAATACTGGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030121.13 ENSMUST00000108096.3 |
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| CDS CCA 72 bp | AAACCCGAACTTGTCCATTGCAACAGAAATGTGCCGTaGCTGCGAAAAACACCTGTAGGCATTACGGTCGTC | + |
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Preference number: 6 (lower is better) Translates to: KPELVHCNRNVP*LRKTPVGITVV Trigger: GACGACCGTAATGCCTACAGGTGTTTTTCGCAGCCACGGCACATTTCTGTTGCAATGGACAAGTTCGGGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030121.13 ENSMUST00000108096.3 |
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| CDS CAA 72 bp | TTACCCAGCGAGCCGCCTGTCTCCTCAGCCGATGCTTaGGGTTTGCTTCTGTTAAAAATGTCGTCATCTTCT | + |
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Preference number: 6 (lower is better) Translates to: LPSEPPVSSADA*GLLLLKMSSSS Trigger: AGAAGATGACGACATTTTTAACAGAAGCAAACCCAAAGCATCGGCTGAGGAGACAGGCGGCTCGCTGGGTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108096.3 |
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| CDS CAA 90 bp | CGATCCGGTCAAACCTCTGAGGATTGGGCTCATTTTTCTTGTCTCTaGAATGCCGGATCATTCGACACCTCCCTACTACAGCATTTGGAC | + |
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Preference number: 6 (lower is better) Translates to: RSGQTSEDWAHFSCL*NAGSFDTSLLQHLD Trigger: GTCCAAATGCTGTAGTAGGGAGGTGTCGAATGATCCGGCATTCAAGAGACAAGAAAAATGAGCCCAATCCTCAGAGGTTTGACCGGATCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| CDS GCA 72 bp | CTGAACATATGGCAGGCTAAACCCGAACTTGTCCATTaGAACAGAAATGTGCCGTGGCTGCGAAAAACACCT | + |
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Preference number: 6 (lower is better) Translates to: LNIWQAKPELVH*NRNVPWLRKTP Trigger: AGGTGTTTTTCGCAGCCACGGCACATTTCTGTTGCAATGGACAAGTTCGGGTTTAGCCTGCCATATGTTCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030121.13 ENSMUST00000108096.3 |
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| CDS GCA 72 bp | GTTCAAACCATCGAAGCGCATCGTTTCCTTTGTATGTaGGATCCGGTCAAACCTCTGAGGATTGGGCTCATT | + |
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Preference number: 6 (lower is better) Translates to: VQTIEAHRFLCM*DPVKPLRIGLI Trigger: AATGAGCCCAATCCTCAGAGGTTTGACCGGATCGCACATACAAAGGAAACGATGCGCTTCGATGGTTTGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| CDS TCA 72 bp | AAACCTCTGAGGATTGGGCTCATTTTTCTTGTCTCTTaGATGCCGGATCATTCGACACCTCCCTACTACAGC | + |
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Preference number: 6 (lower is better) Translates to: KPLRIGLIFLVS*MPDHSTPPYYS Trigger: GCTGTAGTAGGGAGGTGTCGAATGATCCGGCATTCAAGAGACAAGAAAAATGAGCCCAATCCTCAGAGGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| CDS GCA 72 bp | GTAACGGCCGCCCGTCTTTATCTCTGGGTTCTTCTTTaGCAAAAGCTCCAGATCCACAGCAATATTAAAGTC | + |
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Preference number: 6 (lower is better) Translates to: VTAARLYLWVLL*QKLQIHSNIKV Trigger: GACTTTAATATTGCTGTGGATCTGGAGCTTTTGGCAAAGAAGAACCCAGAGATAAAGACGGGCGGCCGTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030121.13 ENSMUST00000108096.3 |
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| CDS CAA 72 bp | CAAACCTCTGAGGATTGGGCTCATTTTTCTTGTCTCTaGAATGCCGGATCATTCGACACCTCCCTACTACAG | + |
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Preference number: 6 (lower is better) Translates to: QTSEDWAHFSCL*NAGSFDTSLLQ Trigger: CTGTAGTAGGGAGGTGTCGAATGATCCGGCATTCAAGAGACAAGAAAAATGAGCCCAATCCTCAGAGGTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| CDS TCA 72 bp | CGGGTATCTCTGTACATCCAACACCTTGTAGGTAAGTaGGTTCAAACCATCGAAGCGCATCGTTTCCTTTGT | + |
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Preference number: 6 (lower is better) Translates to: RVSLYIQHLVGK*VQTIEAHRFLC Trigger: ACAAAGGAAACGATGCGCTTCGATGGTTTGAACTCACTTACCTACAAGGTGTTGGATGTACAGAGATACCCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030121.13 |
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| CDS CCA 72 bp | ACTGAGAGCAGAGACACCTCCAAAATACTGAACATATaGCAGGCTAAACCCGAACTTGTCCATTGCAACAGA | + |
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Preference number: 6 (lower is better) Translates to: TESRDTSKILNI*QAKPELVHCNR Trigger: TCTGTTGCAATGGACAAGTTCGGGTTTAGCCTGCCATATGTTCAGTATTTTGGAGGTGTCTCTGCTCTCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030121.13 ENSMUST00000108096.3 |
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| CDS TCA 72 bp | TGTTGTTTACTGAGAGCAGAGACACCTCCAAAATACTaGACATATGGCAGGCTAAACCCGAACTTGTCCATT | + |
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Preference number: 6 (lower is better) Translates to: CCLLRAETPPKY*TYGRLNPNLSI Trigger: AATGGACAAGTTCGGGTTTAGCCTGCCATATGTTCAGTATTTTGGAGGTGTCTCTGCTCTCAGTAAACAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030121.13 ENSMUST00000108096.3 |
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| CDS CAA 90 bp | ATCACTGAACACAAAGCAGTTGTAATCATAGTCCTTCAAGGCCTCTaGAAAGCCAATATTGAGCAGCTTAGCTCGATTGAACATGGTGTC | + |
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Preference number: 6 (lower is better) Translates to: ITEHKAVVIIVLQGL*KANIEQLSSIEHGV Trigger: GACACCATGTTCAATCGAGCTAAGCTGCTCAATATTGGCTTTCAAGAGGCCTTGAAGGACTATGATTACAACTGCTTTGTGTTCAGTGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030121.13 ENSMUST00000108096.3 |
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| CDS CAA 72 bp | CACAAAGCAGTTGTAATCATAGTCCTTCAAGGCCTCTaGAAAGCCAATATTGAGCAGCTTAGCTCGATTGAA | + |
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Preference number: 6 (lower is better) Translates to: HKAVVIIVLQGL*KANIEQLSSIE Trigger: TTCAATCGAGCTAAGCTGCTCAATATTGGCTTTCAAGAGGCCTTGAAGGACTATGATTACAACTGCTTTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030121.13 ENSMUST00000108096.3 |
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