Pregenerated sensors for B4GALNT4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055629Ensembl transcript IDs: ENSMUST00000048002.7, ENSMUST00000210517.2
Found 189 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCCCAGAGGAGGCTTTTAGGGACCAGCACAGGTGGTGGCAGAGCCTaGATCAAGCTCAGGACGCAGCTTCTACCTGCTGCACCAAGACCC | + |
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Preference number: 1 (lower is better) Translates to: SQRRLLGTSTGGGRA*IKLRTQLLPAAPRP Trigger: GGGTCTTGGTGCAGCAGGTAGAAGCTGCGTCCTGAGCTTGATTCAGGCTCTGCCACCACCTGTGCTGGTCCCTAAAAGCCTCCTCTGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048002.7 ENSMUST00000210517.2 |
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| 3UTR CCA 90 bp | CTATCTGCAGTCCCAGAGGAGGCTTTTAGGGACCAGCACAGGTGGTaGCAGAGCCTGAATCAAGCTCAGGACGCAGCTTCTACCTGCTGC | + |
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Preference number: 1 (lower is better) Translates to: LSAVPEEAFRDQHRW*QSLNQAQDAASTCC Trigger: GCAGCAGGTAGAAGCTGCGTCCTGAGCTTGATTCAGGCTCTGCCACCACCTGTGCTGGTCCCTAAAAGCCTCCTCTGGGACTGCAGATAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048002.7 ENSMUST00000210517.2 |
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| 3UTR CCA 90 bp | CAATGTCGTCGCTACGGAAAATTTCACAGAAATCATCAGGGGGTGTaGGGACCAAGGTGCCTGCCCTGCCACGAGCGCCACCTATCTGCA | + |
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Preference number: 1 (lower is better) Translates to: QCRRYGKFHRNHQGV*GPRCLPCHERHLSA Trigger: TGCAGATAGGTGGCGCTCGTGGCAGGGCAGGCACCTTGGTCCCCACACCCCCTGATGATTTCTGTGAAATTTTCCGTAGCGACGACATTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| 3UTR-3UTR TCA 90 bp | AAATCATCAGGGGGTGTGGGGACCAAGGTGCCTGCCCTGCCACGAGCGCCACCTGGTGGTGGCAGAGCCTaGATCAAGCTCAGGACGCAG | + |
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Preference number: 2 (lower is better) Translates to: KSSGGVGTKVPALPRAPPGGGRA*IKLRTQ Trigger: CTGCGTCCTGAGCTTGATTCAGGCTCTGCCACCACC...AGGTGGCGCTCGTGGCAGGGCAGGCACCTTGGTCCCCACACCCCCTGATGATTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048002.7 ENSMUST00000210517.2 |
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| 3UTR GCA 72 bp | AATCATCAGGGGGTGTGGGGACCAAGGTGCCTGCCCTaGCACGAGCGCCACCTATCTGCAGTCCCAGAGGAG | + |
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Preference number: 3 (lower is better) Translates to: NHQGVWGPRCLP*HERHLSAVPEE Trigger: CTCCTCTGGGACTGCAGATAGGTGGCGCTCGTGGCAGGGCAGGCACCTTGGTCCCCACACCCCCTGATGATT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048002.7 ENSMUST00000210517.2 |
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| 3UTR GCA 72 bp | AGCCTGAATCAAGCTCAGGACGCAGCTTCTACCTGCTaGACCAAGACCCGGTGGCCCAGAGGGCAGCTAGGT | + |
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Preference number: 3 (lower is better) Translates to: SLNQAQDAASTC*TKTRWPRGQLG Trigger: ACCTAGCTGCCCTCTGGGCCACCGGGTCTTGGTGCAGCAGGTAGAAGCTGCGTCCTGAGCTTGATTCAGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048002.7 ENSMUST00000210517.2 |
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| 3UTR GCA 72 bp | CAGAGCCTGAATCAAGCTCAGGACGCAGCTTCTACCTaGTGCACCAAGACCCGGTGGCCCAGAGGGCAGCTA | + |
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Preference number: 3 (lower is better) Translates to: QSLNQAQDAAST*CTKTRWPRGQL Trigger: TAGCTGCCCTCTGGGCCACCGGGTCTTGGTGCAGCAGGTAGAAGCTGCGTCCTGAGCTTGATTCAGGCTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048002.7 ENSMUST00000210517.2 |
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| 3UTR CCA 72 bp | GCAGTCCCAGAGGAGGCTTTTAGGGACCAGCACAGGTaGTGGCAGAGCCTGAATCAAGCTCAGGACGCAGCT | + |
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Preference number: 3 (lower is better) Translates to: AVPEEAFRDQHR*WQSLNQAQDAA Trigger: AGCTGCGTCCTGAGCTTGATTCAGGCTCTGCCACCACCTGTGCTGGTCCCTAAAAGCCTCCTCTGGGACTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048002.7 ENSMUST00000210517.2 |
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| 3UTR CCA 72 bp | GTCCCAGAGGAGGCTTTTAGGGACCAGCACAGGTGGTaGCAGAGCCTGAATCAAGCTCAGGACGCAGCTTCT | + |
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Preference number: 3 (lower is better) Translates to: VPEEAFRDQHRW*QSLNQAQDAAS Trigger: AGAAGCTGCGTCCTGAGCTTGATTCAGGCTCTGCCACCACCTGTGCTGGTCCCTAAAAGCCTCCTCTGGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048002.7 ENSMUST00000210517.2 |
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| 3UTR TCA 72 bp | AGGCTTTTAGGGACCAGCACAGGTGGTGGCAGAGCCTaGATCAAGCTCAGGACGCAGCTTCTACCTGCTGCA | + |
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Preference number: 3 (lower is better) Translates to: RLLGTSTGGGRA*IKLRTQLLPAA Trigger: TGCAGCAGGTAGAAGCTGCGTCCTGAGCTTGATTCAGGCTCTGCCACCACCTGTGCTGGTCCCTAAAAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048002.7 ENSMUST00000210517.2 |
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| CDS-3UTR CCA 90 bp | ACCAAGGTGCCTGCCCTGCCACGAGCGCCACCTATCTGCAGTCCCAGAGGAGGCCCCTCCCGGCCTCCCTaGCTGGTCTGGGCCCTGACT | + |
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Preference number: 4 (lower is better) Translates to: TKVPALPRAPPICSPRGGPSRPP*LVWALT Trigger: AGTCAGGGCCCAGACCAGCCAGGGAGGCCGGGAGGG...GCCTCCTCTGGGACTGCAGATAGGTGGCGCTCGTGGCAGGGCAGGCACCTTGGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR TCA 90 bp | GGGACCAAGGTGCCTGCCCTGCCACGAGCGCCACCTATCTGCAGTCCCAGAGGAGCCACGCGGCGCAGGTaGGCAGCAGCAACAGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: GTKVPALPRAPPICSPRGATRRR*AAATAA Trigger: TGCTGCTGTTGCTGCTGCTCACCTGCGCCGCGTGGC...TCCTCTGGGACTGCAGATAGGTGGCGCTCGTGGCAGGGCAGGCACCTTGGTCCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR CCA 90 bp | GGGGACCAAGGTGCCTGCCCTGCCACGAGCGCCACCTATCTGCAGTCCCAGAGGAGGAAACAGCATGTTTaGGCCCCGCCCCTCGGGCGC | + |
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Preference number: 4 (lower is better) Translates to: GDQGACPATSATYLQSQRRKQHV*APPLGR Trigger: GCGCCCGAGGGGCGGGGCCCAAACATGCTGTTTCCT...CCTCTGGGACTGCAGATAGGTGGCGCTCGTGGCAGGGCAGGCACCTTGGTCCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR TCA 90 bp | GGGGACCAAGGTGCCTGCCCTGCCACGAGCGCCACCTATCTGCAGTCCCAGAGGGGCTGGTCTGGGCCCTaGCTGGGGGCTTTAGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: GDQGACPATSATYLQSQRGWSGP*LGALVL Trigger: CAGAACTAAAGCCCCCAGTCAGGGCCCAGACCAGCC...CCTCTGGGACTGCAGATAGGTGGCGCTCGTGGCAGGGCAGGCACCTTGGTCCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR GCA 90 bp | GTGTGGGGACCAAGGTGCCTGCCCTGCCACGAGCGCCACCTATCTGCAGTCCCACGTTCCAGTGGAGGCTaGTGGGGTGGGGGTCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: VWGPRCLPCHERHLSAVPRSSGG*WGGGPV Trigger: CACAGGACCCCCACCCCAGCAGCCTCCACTGGAACG...TGGGACTGCAGATAGGTGGCGCTCGTGGCAGGGCAGGCACCTTGGTCCCCACAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR GCA 90 bp | GGGGACCAAGGTGCCTGCCCTGCCACGAGCGCCACCTATCTGCAGTCCCAGAGGGGTGAATTCTCCAGGTaGGGTCCACTCGGAGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: GDQGACPATSATYLQSQRGEFSR*GPLGAS Trigger: ACTGGCTCCGAGTGGACCGCACCTGGAGAATTCACC...CCTCTGGGACTGCAGATAGGTGGCGCTCGTGGCAGGGCAGGCACCTTGGTCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR GCA 90 bp | GACCAAGGTGCCTGCCCTGCCACGAGCGCCACCTATCTGCAGTCCCAGAGGAGGGCATCCACTCCAGTTTaGAGGCCTGCAGAGCGCTCG | + |
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Preference number: 4 (lower is better) Translates to: DQGACPATSATYLQSQRRASTPV*RPAERS Trigger: CGAGCGCTCTGCAGGCCTGCAAACTGGAGTGGATGC...CCTCCTCTGGGACTGCAGATAGGTGGCGCTCGTGGCAGGGCAGGCACCTTGGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR GCA 90 bp | ATCATCAGGGGGTGTGGGGACCAAGGTGCCTGCCCTGCCACGAGCGCCACCTATGGGCGAAGGCCAGCTTaGCCTCCACGCAATGCTTGC | + |
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Preference number: 4 (lower is better) Translates to: IIRGCGDQGACPATSATYGRRPA*PPRNAC Trigger: GCAAGCATTGCGTGGAGGGCAAGCTGGCCTTCGCCC...ATAGGTGGCGCTCGTGGCAGGGCAGGCACCTTGGTCCCCACACCCCCTGATGAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR GCA 90 bp | CCCTGCCACGAGCGCCACCTATCTGCAGTCCCAGAGGAGGCTTTTAGGGACCAGGGGCACCTTTGCGGCTaGGTGTGGCCCACATGCCTC | + |
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Preference number: 4 (lower is better) Translates to: PCHERHLSAVPEEAFRDQGHLCG*VWPTCL Trigger: GAGGCATGTGGGCCACACGCAGCCGCAAAGGTGCCC...CTGGTCCCTAAAAGCCTCCTCTGGGACTGCAGATAGGTGGCGCTCGTGGCAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048002.7 ENSMUST00000210517.2 |
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| CDS-3UTR CCA 90 bp | CAAGGTGCCTGCCCTGCCACGAGCGCCACCTATCTGCAGTCCCAGAGGAGGCTTCGCCATGGGGGTGTCTaGTGGGTGAGGTTCAGTGGG | + |
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Preference number: 4 (lower is better) Translates to: QGACPATSATYLQSQRRLRHGGV*WVRFSG Trigger: CCCACTGAACCTCACCCACCAGACACCCCCATGGCG...AAGCCTCCTCTGGGACTGCAGATAGGTGGCGCTCGTGGCAGGGCAGGCACCTTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR CCA 90 bp | CAAGGTGCCTGCCCTGCCACGAGCGCCACCTATCTGCAGTCCCAGAGGAGGCTTAGGCCGGCAGAGCTCTaGGCGACTGTCTGGGTGGAT | + |
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Preference number: 4 (lower is better) Translates to: QGACPATSATYLQSQRRLRPAEL*ATVWVD Trigger: ATCCACCCAGACAGTCGCCCAGAGCTCTGCCGGCCT...AAGCCTCCTCTGGGACTGCAGATAGGTGGCGCTCGTGGCAGGGCAGGCACCTTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048002.7 ENSMUST00000210517.2 |
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| CDS-3UTR TCA 90 bp | CAGGGGGTGTGGGGACCAAGGTGCCTGCCCTGCCACGAGCGCCACCTATCTGCAGTTCCATCCGAGGAGTaGGGAAGAAGGTATCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: QGVWGPRCLPCHERHLSAVPSEE*GRRYPW Trigger: CCAGGGATACCTTCTTCCTCACTCCTCGGATGGAAC...TGCAGATAGGTGGCGCTCGTGGCAGGGCAGGCACCTTGGTCCCCACACCCCCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR GCA 90 bp | GTGTGGGGACCAAGGTGCCTGCCCTGCCACGAGCGCCACCTATCTGCAGTCCCACACAGAGGAAAACGATaGTGCTGGGGTCCTCCACGG | + |
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Preference number: 4 (lower is better) Translates to: VWGPRCLPCHERHLSAVPHRGKR*CWGPPR Trigger: CCGTGGAGGACCCCAGCAGCATCGTTTTCCTCTGTG...TGGGACTGCAGATAGGTGGCGCTCGTGGCAGGGCAGGCACCTTGGTCCCCACAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR GCA 90 bp | CTCAGGACGCAGCTTCTACCTGCTGCACCAAGACCCGGTGGCCCAGAGGGCAGCTTGCCCTCCACGCAATaGTTGCGGATGCTGTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LRTQLLPAAPRPGGPEGSLPSTQ*LRMLSR Trigger: CCTGGACAGCATCCGCAAGCATTGCGTGGAGGGCAA...GCTGCCCTCTGGGCCACCGGGTCTTGGTGCAGCAGGTAGAAGCTGCGTCCTGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR GCA 90 bp | CTCAGGACGCAGCTTCTACCTGCTGCACCAAGACCCGGTGGCCCAGAGGGCAGCACCTCCAGCCCTGCCTaGAGGACCCTGTCAAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: LRTQLLPAAPRPGGPEGSTSSPA*RTLSRS Trigger: ACTTCTTGACAGGGTCCTGCAGGCAGGGCTGGAGGT...GCTGCCCTCTGGGCCACCGGGTCTTGGTGCAGCAGGTAGAAGCTGCGTCCTGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR GCA 90 bp | GGGGACCAAGGTGCCTGCCCTGCCACGAGCGCCACCTATCTGCAGTCCCAGAGGTGCGTGTGGCCCACATaGCTCGCTTCGAGTGATAGT | + |
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Preference number: 4 (lower is better) Translates to: GDQGACPATSATYLQSQRCVWPT*LASSDS Trigger: ACTATCACTCGAAGCGAGGCATGTGGGCCACACGCA...CCTCTGGGACTGCAGATAGGTGGCGCTCGTGGCAGGGCAGGCACCTTGGTCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048002.7 ENSMUST00000210517.2 |
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| CDS-3UTR TCA 90 bp | GTGTGGGGACCAAGGTGCCTGCCCTGCCACGAGCGCCACCTATCTGCAGTCCCAGCCTGCTCCTCTTCATaGCTTTCACTCGAGTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: VWGPRCLPCHERHLSAVPACSSS*LSLESS Trigger: GGAGGACTCGAGTGAAAGTCATGAAGAGGAGCAGGC...TGGGACTGCAGATAGGTGGCGCTCGTGGCAGGGCAGGCACCTTGGTCCCCACAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR TCA 90 bp | CCAGCACAGGTGGTGGCAGAGCCTGAATCAAGCTCAGGACGCAGCTTCTACCTGACGTGCGCTGCCAGTTaGTGGCATCCTCCCGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: PAQVVAEPESSSGRSFYLTCAAS*WHPPAS Trigger: GCTGGCGGGAGGATGCCATCAACTGGCAGCGCACGT...CAGGTAGAAGCTGCGTCCTGAGCTTGATTCAGGCTCTGCCACCACCTGTGCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR GCA 90 bp | AGCCTGAATCAAGCTCAGGACGCAGCTTCTACCTGCTGCACCAAGACCCGGTGGGGGCACCTTTGCGGCTaGGTGTGGCCCACATGCCTC | + |
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Preference number: 4 (lower is better) Translates to: SLNQAQDAASTCCTKTRWGHLCG*VWPTCL Trigger: GAGGCATGTGGGCCACACGCAGCCGCAAAGGTGCCC...CCACCGGGTCTTGGTGCAGCAGGTAGAAGCTGCGTCCTGAGCTTGATTCAGGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048002.7 ENSMUST00000210517.2 |
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| CDS-3UTR CCA 90 bp | CCTGCCACGAGCGCCACCTATCTGCAGTCCCAGAGGAGGCTTTTAGGGACCAGCCACAGTTCGGGGAGGTaGAGCTCGCCCCAAGAAGAG | + |
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Preference number: 4 (lower is better) Translates to: PATSATYLQSQRRLLGTSHSSGR*SSPQEE Trigger: CTCTTCTTGGGGCGAGCTCCACCTCCCCGAACTGTG...GCTGGTCCCTAAAAGCCTCCTCTGGGACTGCAGATAGGTGGCGCTCGTGGCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR CCA 90 bp | AGGTGGTGGCAGAGCCTGAATCAAGCTCAGGACGCAGCTTCTACCTGCTGCACCCCTCCCTGGCTGGTCTaGGCCCTGACTGGGGGCTTT | + |
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Preference number: 4 (lower is better) Translates to: RWWQSLNQAQDAASTCCTPPWLV*ALTGGF Trigger: AAAGCCCCCAGTCAGGGCCCAGACCAGCCAGGGAGG...GGTGCAGCAGGTAGAAGCTGCGTCCTGAGCTTGATTCAGGCTCTGCCACCACCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR CCA 90 bp | CTCAGGACGCAGCTTCTACCTGCTGCACCAAGACCCGGTGGCCCAGAGGGCAGCCTCTCCTGGCAGCTGTaGCCTGGATACCTGAGACAA | + |
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Preference number: 4 (lower is better) Translates to: LRTQLLPAAPRPGGPEGSLSWQL*PGYLRQ Trigger: TTGTCTCAGGTATCCAGGCCACAGCTGCCAGGAGAG...GCTGCCCTCTGGGCCACCGGGTCTTGGTGCAGCAGGTAGAAGCTGCGTCCTGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR CCA 90 bp | AGGTGGTGGCAGAGCCTGAATCAAGCTCAGGACGCAGCTTCTACCTGCTGCACCTGTGGCCTCATCACCTaGGGCCCCATCCTCCTCCCC | + |
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Preference number: 4 (lower is better) Translates to: RWWQSLNQAQDAASTCCTCGLIT*GPILLP Trigger: GGGGAGGAGGATGGGGCCCCAGGTGATGAGGCCACA...GGTGCAGCAGGTAGAAGCTGCGTCCTGAGCTTGATTCAGGCTCTGCCACCACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR CCA 90 bp | GAGCGCCACCTATCTGCAGTCCCAGAGGAGGCTTTTAGGGACCAGCACAGGTGGAGGCCGGCAGAGCTCTaGGCGACTGTCTGGGTGGAT | + |
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Preference number: 4 (lower is better) Translates to: ERHLSAVPEEAFRDQHRWRPAEL*ATVWVD Trigger: ATCCACCCAGACAGTCGCCCAGAGCTCTGCCGGCCT...CCACCTGTGCTGGTCCCTAAAAGCCTCCTCTGGGACTGCAGATAGGTGGCGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048002.7 ENSMUST00000210517.2 |
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| CDS-3UTR TCA 90 bp | GCTTTTAGGGACCAGCACAGGTGGTGGCAGAGCCTGAATCAAGCTCAGGACGCAGGGGTGTCTGGTGGGTaGGGTTCAGTGGGGGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: AFRDQHRWWQSLNQAQDAGVSGG*GSVGVA Trigger: AGCCACCCCCACTGAACCTCACCCACCAGACACCCC...TGCGTCCTGAGCTTGATTCAGGCTCTGCCACCACCTGTGCTGGTCCCTAAAAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR TCA 90 bp | GACCAAGGTGCCTGCCCTGCCACGAGCGCCACCTATCTGCAGTCCCAGAGGAGGGGTCACGTACACCTTTaGAGGCGACTTCTCCACAGT | + |
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Preference number: 4 (lower is better) Translates to: DQGACPATSATYLQSQRRGHVHL*RRLLHS Trigger: ACTGTGGAGAAGTCGCCTTCAAAGGTGTACGTGACC...CCTCCTCTGGGACTGCAGATAGGTGGCGCTCGTGGCAGGGCAGGCACCTTGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR GCA 90 bp | TTTAGGGACCAGCACAGGTGGTGGCAGAGCCTGAATCAAGCTCAGGACGCAGCTCGCACCAGGCTCCGGTaGACATACGTGAGCCACGCG | + |
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Preference number: 4 (lower is better) Translates to: FRDQHRWWQSLNQAQDAARTRLR*TYVSHA Trigger: CGCGTGGCTCACGTATGTGCACCGGAGCCTGGTGCG...AGCTGCGTCCTGAGCTTGATTCAGGCTCTGCCACCACCTGTGCTGGTCCCTAAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR CCA 90 bp | CACGAGCGCCACCTATCTGCAGTCCCAGAGGAGGCTTTTAGGGACCAGCACAGGGTGGGTGAGGTTCAGTaGGGGTGGCTTCCTAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: HERHLSAVPEEAFRDQHRVGEVQ*GWLPRS Trigger: GGACCTAGGAAGCCACCCCCACTGAACCTCACCCAC...CCTGTGCTGGTCCCTAAAAGCCTCCTCTGGGACTGCAGATAGGTGGCGCTCGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR CCA 90 bp | AATTTCACAGAAATCATCAGGGGGTGTGGGGACCAAGGTGCCTGCCCTGCCACGTGGAGGCTGCTGGGGTaGGGGTCCTGTGGCTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: NFTEIIRGCGDQGACPATWRLLG*GSCGSA Trigger: AGCAGAGCCACAGGACCCCCACCCCAGCAGCCTCCA...CGTGGCAGGGCAGGCACCTTGGTCCCCACACCCCCTGATGATTTCTGTGAAATT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR TCA 90 bp | GGGGACCAAGGTGCCTGCCCTGCCACGAGCGCCACCTATCTGCAGTCCCAGAGGCACTTCCACATGGTCTaGACCCTTGTCATCTTGCTT | + |
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Preference number: 4 (lower is better) Translates to: GDQGACPATSATYLQSQRHFHMV*TLVILL Trigger: AAGCAAGATGACAAGGGTTCAGACCATGTGGAAGTG...CCTCTGGGACTGCAGATAGGTGGCGCTCGTGGCAGGGCAGGCACCTTGGTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR TCA 90 bp | GGACGCAGCTTCTACCTGCTGCACCAAGACCCGGTGGCCCAGAGGGCAGCTAGGTTGTCTGTCTCCATGTaGGTGAGACGGGTATGGTCA | + |
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Preference number: 4 (lower is better) Translates to: GRSFYLLHQDPVAQRAARLSVSM*VRRVWS Trigger: TGACCATACCCGTCTCACTCACATGGAGACAGACAA...CCTAGCTGCCCTCTGGGCCACCGGGTCTTGGTGCAGCAGGTAGAAGCTGCGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR TCA 90 bp | AAATCATCAGGGGGTGTGGGGACCAAGGTGCCTGCCCTGCCACGAGCGCCACCTGGAAGTCATCTGGGTTaGGGAAGAGGAAGGCTCTAC | + |
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Preference number: 4 (lower is better) Translates to: KSSGGVGTKVPALPRAPPGSHLG*GRGRLY Trigger: GTAGAGCCTTCCTCTTCCTCAACCCAGATGACTTCC...AGGTGGCGCTCGTGGCAGGGCAGGCACCTTGGTCCCCACACCCCCTGATGATTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR TCA 90 bp | CAAGGTGCCTGCCCTGCCACGAGCGCCACCTATCTGCAGTCCCAGAGGAGGCTTTTCCTCACTGTCTTCTaGTGTGGCCTCATCACCTGG | + |
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Preference number: 4 (lower is better) Translates to: QGACPATSATYLQSQRRLFLTVF*CGLITW Trigger: CCAGGTGATGAGGCCACATCAGAAGACAGTGAGGAA...AAGCCTCCTCTGGGACTGCAGATAGGTGGCGCTCGTGGCAGGGCAGGCACCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR GCA 90 bp | GGGACCAAGGTGCCTGCCCTGCCACGAGCGCCACCTATCTGCAGTCCCAGAGGACAGTCCTCAAACACGTaGAGGTTCACCTGTCCTTTG | + |
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Preference number: 4 (lower is better) Translates to: GTKVPALPRAPPICSPRGQSSNT*RFTCPL Trigger: CAAAGGACAGGTGAACCTGCACGTGTTTGAGGACTG...TCCTCTGGGACTGCAGATAGGTGGCGCTCGTGGCAGGGCAGGCACCTTGGTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR CCA 90 bp | AATCAAGCTCAGGACGCAGCTTCTACCTGCTGCACCAAGACCCGGTGGCCCAGACATGGGGGTGTCTGGTaGGTGAGGTTCAGTGGGGGT | + |
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Preference number: 4 (lower is better) Translates to: NQAQDAASTCCTKTRWPRHGGVW*VRFSGG Trigger: ACCCCCACTGAACCTCACCCACCAGACACCCCCATG...TCTGGGCCACCGGGTCTTGGTGCAGCAGGTAGAAGCTGCGTCCTGAGCTTGATT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR CCA 90 bp | TTTAGGGACCAGCACAGGTGGTGGCAGAGCCTGAATCAAGCTCAGGACGCAGCTGGTATCCCTGGGGTCTaGGTGCAGCATGTCGGCGCT | + |
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Preference number: 4 (lower is better) Translates to: FRDQHRWWQSLNQAQDAAGIPGV*VQHVGA Trigger: AGCGCCGACATGCTGCACCCAGACCCCAGGGATACC...AGCTGCGTCCTGAGCTTGATTCAGGCTCTGCCACCACCTGTGCTGGTCCCTAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR CCA 90 bp | CCTGCCACGAGCGCCACCTATCTGCAGTCCCAGAGGAGGCTTTTAGGGACCAGCGTCCAGGTCGGACCCTaGTCACGTACACCTTTGAAG | + |
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Preference number: 4 (lower is better) Translates to: PATSATYLQSQRRLLGTSVQVGP*SRTPLK Trigger: CTTCAAAGGTGTACGTGACCAGGGTCCGACCTGGAC...GCTGGTCCCTAAAAGCCTCCTCTGGGACTGCAGATAGGTGGCGCTCGTGGCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR CCA 90 bp | CCTGCCACGAGCGCCACCTATCTGCAGTCCCAGAGGAGGCTTTTAGGGACCAGCTTCTTCACCCTCTCCTaGCAGCTGTGGCCTGGATAC | + |
|
Preference number: 4 (lower is better) Translates to: PATSATYLQSQRRLLGTSFFTLS*QLWPGY Trigger: GTATCCAGGCCACAGCTGCCAGGAGAGGGTGAAGAA...GCTGGTCCCTAAAAGCCTCCTCTGGGACTGCAGATAGGTGGCGCTCGTGGCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR TCA 90 bp | GTGGCAGAGCCTGAATCAAGCTCAGGACGCAGCTTCTACCTGCTGCACCAAGACGGGGCTTTAGTTCTGTaGCCTTGGGGCCACTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VAEPESSSGRSFYLLHQDGALVL*PWGHWS Trigger: GGACCAGTGGCCCCAAGGTCACAGAACTAAAGCCCC...GTCTTGGTGCAGCAGGTAGAAGCTGCGTCCTGAGCTTGATTCAGGCTCTGCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR GCA 90 bp | AGGTGCCTGCCCTGCCACGAGCGCCACCTATCTGCAGTCCCAGAGGAGGCTTTTGGAAAGAGTGGGAAGTaGAGATTCCGTCTCAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RCLPCHERHLSAVPEEAFGKSGK*RFRLRW Trigger: CCACCTGAGACGGAATCTGCACTTCCCACTCTTTCC...AAAAGCCTCCTCTGGGACTGCAGATAGGTGGCGCTCGTGGCAGGGCAGGCACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR GCA 90 bp | CCAGCACAGGTGGTGGCAGAGCCTGAATCAAGCTCAGGACGCAGCTTCTACCTGACGCTGAACGTGCGCTaGCAGTTGATGGCATCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PAQVVAEPESSSGRSFYLTLNVR*QLMASS Trigger: GGAGGATGCCATCAACTGGCAGCGCACGTTCAGCGT...CAGGTAGAAGCTGCGTCCTGAGCTTGATTCAGGCTCTGCCACCACCTGTGCTGG 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR GCA 90 bp | GAGCCTGAATCAAGCTCAGGACGCAGCTTCTACCTGCTGCACCAAGACCCGGTGGAGAAGCGCCCGCCATaGTTTGCATTTAGCCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: EPESSSGRSFYLLHQDPVEKRPP*FAFSRS Trigger: GGAGCGGCTAAATGCAAAGCATGGCGGGCGCTTCTC...CACCGGGTCTTGGTGCAGCAGGTAGAAGCTGCGTCCTGAGCTTGATTCAGGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR GCA 90 bp | AGGGACCAGCACAGGTGGTGGCAGAGCCTGAATCAAGCTCAGGACGCAGCTTCTCTCCCTCCGCGCTCTTaGAATTCCAGTTCCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RDQHRWWQSLNQAQDAASLPPRS*NSSSRR Trigger: CCTCCTGGAACTGGAATTGCAAGAGCGCGGAGGGAG...AGAAGCTGCGTCCTGAGCTTGATTCAGGCTCTGCCACCACCTGTGCTGGTCCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR GCA 90 bp | GAGCGCCACCTATCTGCAGTCCCAGAGGAGGCTTTTAGGGACCAGCACAGGTGGCAGCGCGGTCATATCTaGCAGGAACTGCACTACCCA | + |
|
Preference number: 4 (lower is better) Translates to: ERHLSAVPEEAFRDQHRWQRGHI*QELHYP Trigger: TGGGTAGTGCAGTTCCTGGCAGATATGACCGCGCTG...CCACCTGTGCTGGTCCCTAAAAGCCTCCTCTGGGACTGCAGATAGGTGGCGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048002.7 ENSMUST00000210517.2 |
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| CDS-3UTR CCA 90 bp | CCAGCACAGGTGGTGGCAGAGCCTGAATCAAGCTCAGGACGCAGCTTCTACCTGAAGCTGGGCGGCTGCTaGGCTCTCATCCAAACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PAQVVAEPESSSGRSFYLKLGGC*ALIQTQ Trigger: CTGAGTTTGGATGAGAGCCCAGCAGCCGCCCAGCTT...CAGGTAGAAGCTGCGTCCTGAGCTTGATTCAGGCTCTGCCACCACCTGTGCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR CCA 90 bp | AGGGACCAGCACAGGTGGTGGCAGAGCCTGAATCAAGCTCAGGACGCAGCTTCTTCCTATGTGGCTGGCTaGAGACTGAGGCACATGGGC | + |
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Preference number: 4 (lower is better) Translates to: RDQHRWWQSLNQAQDAASSYVAG*RLRHMG Trigger: GCCCATGTGCCTCAGTCTCCAGCCAGCCACATAGGA...AGAAGCTGCGTCCTGAGCTTGATTCAGGCTCTGCCACCACCTGTGCTGGTCCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR CCA 90 bp | CAAGGTGCCTGCCCTGCCACGAGCGCCACCTATCTGCAGTCCCAGAGGAGGCTTATCCAGGAAGTCATCTaGGTTGAGGAAGAGGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: QGACPATSATYLQSQRRLIQEVI*VEEEEG Trigger: GCCTTCCTCTTCCTCAACCCAGATGACTTCCTGGAT...AAGCCTCCTCTGGGACTGCAGATAGGTGGCGCTCGTGGCAGGGCAGGCACCTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR CCA 90 bp | AGGGACCAGCACAGGTGGTGGCAGAGCCTGAATCAAGCTCAGGACGCAGCTTCTCACTGTCTTCTGATGTaGCCTCATCACCTGGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RDQHRWWQSLNQAQDAASHCLLM*PHHLGP Trigger: GGGCCCCAGGTGATGAGGCCACATCAGAAGACAGTG...AGAAGCTGCGTCCTGAGCTTGATTCAGGCTCTGCCACCACCTGTGCTGGTCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR CCA 90 bp | AATTTCACAGAAATCATCAGGGGGTGTGGGGACCAAGGTGCCTGCCCTGCCACGTCCTCGCCTCCCCACTaGTCACGGAACTCCTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: NFTEIIRGCGDQGACPATSSPPH*SRNSSV Trigger: CACTGAGGAGTTCCGTGACCAGTGGGGAGGCGAGGA...CGTGGCAGGGCAGGCACCTTGGTCCCCACACCCCCTGATGATTTCTGTGAAATT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR TCA 90 bp | GCTCAGGACGCAGCTTCTACCTGCTGCACCAAGACCCGGTGGCCCAGAGGGCAGTGTGAGCAGAATCAATaGTCTCGAACTTCAGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: AQDAASTCCTKTRWPRGQCEQNQ*SRTSDQ Trigger: CTGGTCTGAAGTTCGAGATCATTGATTCTGCTCACA...CTGCCCTCTGGGCCACCGGGTCTTGGTGCAGCAGGTAGAAGCTGCGTCCTGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR TCA 90 bp | ACCAAGGTGCCTGCCCTGCCACGAGCGCCACCTATCTGCAGTCCCAGAGGAGGCGTGTACAGGGAAATGTaGGCAGAATCAATGATCTCG | + |
|
Preference number: 4 (lower is better) Translates to: TKVPALPRAPPICSPRGGVYREM*AESMIS Trigger: CGAGATCATTGATTCTGCTCACATTTCCCTGTACAC...GCCTCCTCTGGGACTGCAGATAGGTGGCGCTCGTGGCAGGGCAGGCACCTTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR GCA 90 bp | TTTAGGGACCAGCACAGGTGGTGGCAGAGCCTGAATCAAGCTCAGGACGCAGCTGGGGTCCTGTGGCTCTaGTGTACAGATGCATCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: FRDQHRWWQSLNQAQDAAGVLWL*CTDASV Trigger: CACCGATGCATCTGTACAGCAGAGCCACAGGACCCC...AGCTGCGTCCTGAGCTTGATTCAGGCTCTGCCACCACCTGTGCTGGTCCCTAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR GCA 90 bp | CAGAGCCTGAATCAAGCTCAGGACGCAGCTTCTACCTGCTGCACCAAGACCCGGTGCGTGTGGCCCACATaGCTCGCTTCGAGTGATAGT | + |
|
Preference number: 4 (lower is better) Translates to: QSLNQAQDAASTCCTKTRCVWPT*LASSDS Trigger: ACTATCACTCGAAGCGAGGCATGTGGGCCACACGCA...CCGGGTCTTGGTGCAGCAGGTAGAAGCTGCGTCCTGAGCTTGATTCAGGCTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048002.7 ENSMUST00000210517.2 |
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| CDS-3UTR CCA 90 bp | CACAGAAATCATCAGGGGGTGTGGGGACCAAGGTGCCTGCCCTGCCACGAGCGCCAACCCACTTCCACATaGTCTGAACCCTTGTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: HRNHQGVWGPRCLPCHERQPTST*SEPLSS Trigger: AGATGACAAGGGTTCAGACCATGTGGAAGTGGGTTG...GCGCTCGTGGCAGGGCAGGCACCTTGGTCCCCACACCCCCTGATGATTTCTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR CCA 90 bp | GAGCGCCACCTATCTGCAGTCCCAGAGGAGGCTTTTAGGGACCAGCACAGGTGGGGCACATGGGCCACATaGTCCATCTTCAGAGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: ERHLSAVPEEAFRDQHRWGTWAT*SIFRDD Trigger: GTCATCTCTGAAGATGGACCATGTGGCCCATGTGCC...CCACCTGTGCTGGTCCCTAAAAGCCTCCTCTGGGACTGCAGATAGGTGGCGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR CCA 90 bp | GAGCCTGAATCAAGCTCAGGACGCAGCTTCTACCTGCTGCACCAAGACCCGGTGGGAAGAAGGTATCCCTaGGGTCTGGGTGCAGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: EPESSSGRSFYLLHQDPVGRRYP*GLGAAC Trigger: ACATGCTGCACCCAGACCCCAGGGATACCTTCTTCC...CACCGGGTCTTGGTGCAGCAGGTAGAAGCTGCGTCCTGAGCTTGATTCAGGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR CCA 90 bp | CCTGCCACGAGCGCCACCTATCTGCAGTCCCAGAGGAGGCTTTTAGGGACCAGCGTCCAGGATATTAGGTaGGAAGTGGATGTGCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PATSATYLQSQRRLLGTSVQDIR*EVDVQV Trigger: GACCTGCACATCCACTTCCCACCTAATATCCTGGAC...GCTGGTCCCTAAAAGCCTCCTCTGGGACTGCAGATAGGTGGCGCTCGTGGCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR GCA 90 bp | CCAGAGGAGGCTTTTAGGGACCAGCACAGGTGGTGGCAGAGCCTGAATCAAGCTCAGCGCGGTCATATCTaGCAGGAACTGCACTACCCA | + |
|
Preference number: 4 (lower is better) Translates to: PEEAFRDQHRWWQSLNQAQRGHI*QELHYP Trigger: TGGGTAGTGCAGTTCCTGGCAGATATGACCGCGCTG...AGCTTGATTCAGGCTCTGCCACCACCTGTGCTGGTCCCTAAAAGCCTCCTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048002.7 ENSMUST00000210517.2 |
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| CDS-3UTR TCA 90 bp | AATTTCACAGAAATCATCAGGGGGTGTGGGGACCAAGGTGCCTGCCCTGCCACGACCGTAGTACGAGTGTaGGGAAAGAGTGGGAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: NFTEIIRGCGDQGACPATTVVRV*GKSGKC Trigger: GCACTTCCCACTCTTTCCTCACACTCGTACTACGGT...CGTGGCAGGGCAGGCACCTTGGTCCCCACACCCCCTGATGATTTCTGTGAAATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR GCA 90 bp | AAATTTCACAGAAATCATCAGGGGGTGTGGGGACCAAGGTGCCTGCCCTGCCACGCAGCTTCATCTGCTTaGGGACCTTCTTCACCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KFHRNHQGVWGPRCLPCHAASSA*GPSSPG Trigger: TCCCGGTGAAGAAGGTCCGCAAGCAGATGAAGCTGC...GTGGCAGGGCAGGCACCTTGGTCCCCACACCCCCTGATGATTTCTGTGAAATTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR CCA 90 bp | GTCCCAGAGGAGGCTTTTAGGGACCAGCACAGGTGGTGGCAGAGCCTGAATCAAATCCTCCTATGTGGCTaGCTGGAGACTGAGGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: VPEEAFRDQHRWWQSLNQILLCG*LETEAH Trigger: ATGTGCCTCAGTCTCCAGCCAGCCACATAGGAGGAT...TTGATTCAGGCTCTGCCACCACCTGTGCTGGTCCCTAAAAGCCTCCTCTGGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR TCA 90 bp | AGGTGGTGGCAGAGCCTGAATCAAGCTCAGGACGCAGCTTCTACCTGCTGCACCGTCCATCTTCAGAGATaGCTCATCTGTGTACAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RWWQSLNQAQDAASTCCTVHLQR*LICVQG Trigger: TCCCTGTACACAGATGAGTCATCTCTGAAGATGGAC...GGTGCAGCAGGTAGAAGCTGCGTCCTGAGCTTGATTCAGGCTCTGCCACCACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR TCA 90 bp | AAATTTCACAGAAATCATCAGGGGGTGTGGGGACCAAGGTGCCTGCCCTGCCACCTGTCTCCATGTGAGTaGGACGGGTATGGTCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: KFHRNHQGVWGPRCLPCHLSPCE*DGYGHW Trigger: CCAATGACCATACCCGTCTCACTCACATGGAGACAG...GTGGCAGGGCAGGCACCTTGGTCCCCACACCCCCTGATGATTTCTGTGAAATTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR TCA 90 bp | AATTTCACAGAAATCATCAGGGGGTGTGGGGACCAAGGTGCCTGCCCTGCCACGAGGCTGTGTTTCCACTaGGGAGTTCAAGTCCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: NFTEIIRGCGDQGACPATRLCFH*GVQVHC Trigger: ACAGTGGACTTGAACTCCTCAGTGGAAACACAGCCT...CGTGGCAGGGCAGGCACCTTGGTCCCCACACCCCCTGATGATTTCTGTGAAATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR TCA 90 bp | AAATTTCACAGAAATCATCAGGGGGTGTGGGGACCAAGGTGCCTGCCCTGCCACTGTGGCCTGGATACCTaGGACAAGCTCAGGAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KFHRNHQGVWGPRCLPCHCGLDT*DKLRKE Trigger: TTCCTTCCTGAGCTTGTCTCAGGTATCCAGGCCACA...GTGGCAGGGCAGGCACCTTGGTCCCCACACCCCCTGATGATTTCTGTGAAATTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR GCA 90 bp | AAATTTCACAGAAATCATCAGGGGGTGTGGGGACCAAGGTGCCTGCCCTGCCACACTCGGAGCCAGTCTTaGCCACAAAGGCTACAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KFHRNHQGVWGPRCLPCHTRSQS*PQRLQA Trigger: AGCTTGTAGCCTTTGTGGGCAAGACTGGCTCCGAGT...GTGGCAGGGCAGGCACCTTGGTCCCCACACCCCCTGATGATTTCTGTGAAATTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR CCA 90 bp | TTTAGGGACCAGCACAGGTGGTGGCAGAGCCTGAATCAAGCTCAGGACGCAGCTCGTGGCTTAGACACCTaGGAGCTGAACTTGGTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: FRDQHRWWQSLNQAQDAARGLDT*ELNLVN Trigger: ATTCACCAAGTTCAGCTCCCAGGTGTCTAAGCCACG...AGCTGCGTCCTGAGCTTGATTCAGGCTCTGCCACCACCTGTGCTGGTCCCTAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR CCA 90 bp | CACAGAAATCATCAGGGGGTGTGGGGACCAAGGTGCCTGCCCTGCCACGAGCGCCGCCTGATTCTTCACTaGTACAATGAAATGAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: HRNHQGVWGPRCLPCHERRLILH*YNEMNH Trigger: ATGGTTCATTTCATTGTACCAGTGAAGAATCAGGCG...GCGCTCGTGGCAGGGCAGGCACCTTGGTCCCCACACCCCCTGATGATTTCTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048002.7 ENSMUST00000210517.2 |
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| CDS-3UTR CCA 90 bp | CCAGAGGAGGCTTTTAGGGACCAGCACAGGTGGTGGCAGAGCCTGAATCAAGCTAGTGTGAGGAAAGAGTaGGAAGTGCAGATTCCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PEEAFRDQHRWWQSLNQASVRKE*EVQIPS Trigger: AGACGGAATCTGCACTTCCCACTCTTTCCTCACACT...AGCTTGATTCAGGCTCTGCCACCACCTGTGCTGGTCCCTAAAAGCCTCCTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR CCA 90 bp | GCTTTTAGGGACCAGCACAGGTGGTGGCAGAGCCTGAATCAAGCTCAGGACGCAGTCTCCATCTCTGGCTaGGTGGATGAAGCCAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: AFRDQHRWWQSLNQAQDAVSISG*VDEAKN Trigger: ATTTTTGGCTTCATCCACCCAGCCAGAGATGGAGAC...TGCGTCCTGAGCTTGATTCAGGCTCTGCCACCACCTGTGCTGGTCCCTAAAAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR GCA 90 bp | CCAGAGGAGGCTTTTAGGGACCAGCACAGGTGGTGGCAGAGCCTGAATCAAGCTACTCCTCAGTGTTCATaGCTCCTACTCTGTCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: PEEAFRDQHRWWQSLNQATPQCS*LLLCQS Trigger: ACTTTGACAGAGTAGGAGGCATGAACACTGAGGAGT...AGCTTGATTCAGGCTCTGCCACCACCTGTGCTGGTCCCTAAAAGCCTCCTCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR CCA 90 bp | CCAGCACAGGTGGTGGCAGAGCCTGAATCAAGCTCAGGACGCAGCTTCTACCTGACAAACTGTAGTCCTTaGTATCTGGCTATGGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: PAQVVAEPESSSGRSFYLTNCSP*YLAMGK Trigger: TTTCCCCATAGCCAGATACCAAGGACTACAGTTTGT...CAGGTAGAAGCTGCGTCCTGAGCTTGATTCAGGCTCTGCCACCACCTGTGCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR CCA 90 bp | CACGAGCGCCACCTATCTGCAGTCCCAGAGGAGGCTTTTAGGGACCAGCACAGGCGCCTGATTCTTCACTaGTACAATGAAATGAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: HERHLSAVPEEAFRDQHRRLILH*YNEMNH Trigger: ATGGTTCATTTCATTGTACCAGTGAAGAATCAGGCG...CCTGTGCTGGTCCCTAAAAGCCTCCTCTGGGACTGCAGATAGGTGGCGCTCGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048002.7 ENSMUST00000210517.2 |
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| CDS-3UTR TCA 90 bp | AGGTGGTGGCAGAGCCTGAATCAAGCTCAGGACGCAGCTTCTACCTGCTGCACCTACTCTGTCAAAGTCTaGTTTGTAGATCCCAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RWWQSLNQAQDAASTCCTYSVKV*FVDPKE Trigger: CTCTTTGGGATCTACAAATCAGACTTTGACAGAGTA...GGTGCAGCAGGTAGAAGCTGCGTCCTGAGCTTGATTCAGGCTCTGCCACCACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR CCA 90 bp | GTAAATTCTGAAAACAATGTCGTCGCTACGGAAAATTTCACAGAAATCATCAGGTGGCTGTCGTTCCAGTaGAGGCTGCTGGGGTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VNSENNVVATENFTEIIRWLSFQ*RLLGWG Trigger: CCCCCACCCCAGCAGCCTCCACTGGAACGACAGCCA...CCTGATGATTTCTGTGAAATTTTCCGTAGCGACGACATTGTTTTCAGAATTTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR CCA 90 bp | GTAAATTCTGAAAACAATGTCGTCGCTACGGAAAATTTCACAGAAATCATCAGGGGGGTGGGGGTCCTGTaGCTCTGCTGTACAGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: VNSENNVVATENFTEIIRGVGVL*LCCTDA Trigger: TGCATCTGTACAGCAGAGCCACAGGACCCCCACCCC...CCTGATGATTTCTGTGAAATTTTCCGTAGCGACGACATTGTTTTCAGAATTTAC 47% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR CCA 90 bp | GTAAATTCTGAAAACAATGTCGTCGCTACGGAAAATTTCACAGAAATCATCAGGACAAAGGCTACAAGCTaGGCGGCTGCTGGGCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VNSENNVVATENFTEIIRTKATS*AAAGLS Trigger: TGAGAGCCCAGCAGCCGCCCAGCTTGTAGCCTTTGT...CCTGATGATTTCTGTGAAATTTTCCGTAGCGACGACATTGTTTTCAGAATTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR TCA 90 bp | AACAGAACAGACAGAACTCTTGTAAATTCTGAAAACAATGTCGTCGCTACGGAACTATGGGGAAATCCTTaGGGATATAGGTGGGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: NRTDRTLVNSENNVVATELWGNP*GYRWGH Trigger: ATGCCCCCACCTATATCCTCAAGGATTTCCCCATAG...TTCCGTAGCGACGACATTGTTTTCAGAATTTACAAGAGTTCTGTCTGTTCTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR GCA 90 bp | CTTGTAAATTCTGAAAACAATGTCGTCGCTACGGAAAATTTCACAGAAATCATCTCTCCACGTTCACGATaGGTAGAAGCGAGAAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: LVNSENNVVATENFTEIISPRSR*VEARSA Trigger: GGCGCTTCTCGCTTCTACGCATCGTGAACGTGGAGA...GATGATTTCTGTGAAATTTTCCGTAGCGACGACATTGTTTTCAGAATTTACAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR CCA 90 bp | CTTGTAAATTCTGAAAACAATGTCGTCGCTACGGAAAATTTCACAGAAATCATCCTGGCAGCTGTGGCCTaGATACCTGAGACAAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LVNSENNVVATENFTEIILAAVA*IPETSS Trigger: TGAGCTTGTCTCAGGTATCCAGGCCACAGCTGCCAG...GATGATTTCTGTGAAATTTTCCGTAGCGACGACATTGTTTTCAGAATTTACAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR GCA 90 bp | GTAAATTCTGAAAACAATGTCGTCGCTACGGAAAATTTCACAGAAATCATCAGGGAACCCTTGTCATCTTaGTTGTGGAGCAGTTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VNSENNVVATENFTEIIREPLSS*LWSSSK Trigger: CTTTGAACTGCTCCACAAGCAAGATGACAAGGGTTC...CCTGATGATTTCTGTGAAATTTTCCGTAGCGACGACATTGTTTTCAGAATTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS GCA 90 bp | GAGCGCAGGAGCTCGAAGTCCATGGCGCCCACGCTGAACGTGCGCTaGCAGTTGATGGCATCCTCCCGCCAGCGACCCAGGGGCCGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: ERRSSKSMAPTLNVR*QLMASSRQRPRGRP Trigger: TGGGCGGCCCCTGGGTCGCTGGCGGGAGGATGCCATCAACTGGCAGCGCACGTTCAGCGTGGGCGCCATGGACTTCGAGCTCCTGCGCTC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS CCA 90 bp | AGCCCTGGGTCCGAGGTGGATGTGGGGGTACCCGCAGCTGTACTCTaGGCAGAGGCTTGGGGCGCAGGAAGACGCCAGGGAAGGGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SPGSEVDVGVPAAVL*AEAWGAGRRQGRVA Trigger: GGCCACCCTTCCCTGGCGTCTTCCTGCGCCCCAAGCCTCTGCCCAGAGTACAGCTGCGGGTACCCCCACATCCACCTCGGACCCAGGGCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS CCA 90 bp | AGGCCGGCAGAGCTCTGGGCGACTGTCTGGGTGGATCGAGGCGGCTaGAGGCGGCTCGGGACTTTCTCCATCTTCGTCCCCAACGCGGGC | + |
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Preference number: 5 (lower is better) Translates to: RPAELWATVWVDRGG*RRLGTFSIFVPNAG Trigger: GCCCGCGTTGGGGACGAAGATGGAGAAAGTCCCGAGCCGCCTCCAGCCGCCTCGATCCACCCAGACAGTCGCCCAGAGCTCTGCCGGCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS CCA 90 bp | CATGACATCCTGACGCCAGGCCAGATGCAAAGGCCGGCAGAGCTCTaGGCGACTGTCTGGGTGGATCGAGGCGGCTGGAGGCGGCTCGGG | + |
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Preference number: 5 (lower is better) Translates to: HDILTPGQMQRPAEL*ATVWVDRGGWRRLG Trigger: CCCGAGCCGCCTCCAGCCGCCTCGATCCACCCAGACAGTCGCCCAGAGCTCTGCCGGCCTTTGCATCTGGCCTGGCGTCAGGATGTCATG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS CCA 90 bp | ACGCCAGGCCAGATGCAAAGGCCGGCAGAGCTCTGGGCGACTGTCTaGGTGGATCGAGGCGGCTGGAGGCGGCTCGGGACTTTCTCCATC | + |
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Preference number: 5 (lower is better) Translates to: TPGQMQRPAELWATV*VDRGGWRRLGTFSI Trigger: GATGGAGAAAGTCCCGAGCCGCCTCCAGCCGCCTCGATCCACCCAGACAGTCGCCCAGAGCTCTGCCGGCCTTTGCATCTGGCCTGGCGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS CCA 90 bp | CAGGCCAGATGCAAAGGCCGGCAGAGCTCTGGGCGACTGTCTGGGTaGATCGAGGCGGCTGGAGGCGGCTCGGGACTTTCTCCATCTTCG | + |
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Preference number: 5 (lower is better) Translates to: QARCKGRQSSGRLSG*IEAAGGGSGLSPSS Trigger: CGAAGATGGAGAAAGTCCCGAGCCGCCTCCAGCCGCCTCGATCCACCCAGACAGTCGCCCAGAGCTCTGCCGGCCTTTGCATCTGGCCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR CAA 90 bp | GCTCAGGACGCAGCTTCTACCTGCTGCACCAAGACCCGGTGGCCCAGAGGGCAGGGCATCCACTCCAGTTaGCAGGCCTGCAGAGCGCTC | + |
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Preference number: 5 (lower is better) Translates to: AQDAASTCCTKTRWPRGQGIHSS*QACRAL Trigger: GAGCGCTCTGCAGGCCTGCAAACTGGAGTGGATGCC...CTGCCCTCTGGGCCACCGGGTCTTGGTGCAGCAGGTAGAAGCTGCGTCCTGAGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS CCA 90 bp | AGTCCCTGTCCATGTAACTGGCCCTCCCGGCCTCCCTGGCTGGTCTaGGCCCTGACTGGGGGCTTTAGTTCTGTGACCTTGGGGCCACTG | + |
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Preference number: 5 (lower is better) Translates to: SPCPCNWPSRPPWLV*ALTGGFSSVTLGPL Trigger: CAGTGGCCCCAAGGTCACAGAACTAAAGCCCCCAGTCAGGGCCCAGACCAGCCAGGGAGGCCGGGAGGGCCAGTTACATGGACAGGGACT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR CAA 90 bp | GGGGACCAAGGTGCCTGCCCTGCCACGAGCGCCACCTATCTGCAGTCCCAGAGGAGCAGCTTCATCTGCTaGCGGACCTTCTTCACCGGG | + |
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Preference number: 5 (lower is better) Translates to: GDQGACPATSATYLQSQRSSFIC*RTFFTG Trigger: CCCGGTGAAGAAGGTCCGCAAGCAGATGAAGCTGCT...CCTCTGGGACTGCAGATAGGTGGCGCTCGTGGCAGGGCAGGCACCTTGGTCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR CAA 90 bp | CACGAGCGCCACCTATCTGCAGTCCCAGAGGAGGCTTTTAGGGACCAGCACAGGCAGGAAACAGCATGTTaGGGCCCCGCCCCTCGGGCG | + |
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Preference number: 5 (lower is better) Translates to: HERHLSAVPEEAFRDQHRQETAC*GPAPRA Trigger: CGCCCGAGGGGCGGGGCCCAAACATGCTGTTTCCTG...CCTGTGCTGGTCCCTAAAAGCCTCCTCTGGGACTGCAGATAGGTGGCGCTCGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS GCA 90 bp | AGGAAGACGTATTCGGATAGGCGCTGGCGGCTCCCTCCGCGCTCTTaGAATTCCAGTTCCAGGAGGAAGCGGCTCCCGCGTGCAGAGTCG | + |
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Preference number: 5 (lower is better) Translates to: RKTYSDRRWRLPPRS*NSSSRRKRLPRAES Trigger: CGACTCTGCACGCGGGAGCCGCTTCCTCCTGGAACTGGAATTGCAAGAGCGCGGAGGGAGCCGCCAGCGCCTATCCGAATACGTCTTCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS CCA 90 bp | TGTCGGCGCTGGGTTCCCCCTGCGGCGGGAATCCTCCTATGTGGCTaGCTGGAGACTGAGGCACATGGGCCACATGGTCCATCTTCAGAG | + |
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Preference number: 5 (lower is better) Translates to: CRRWVPPAAGILLCG*LETEAHGPHGPSSE Trigger: CTCTGAAGATGGACCATGTGGCCCATGTGCCTCAGTCTCCAGCCAGCCACATAGGAGGATTCCCGCCGCAGGGGGAACCCAGCGCCGACA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS CCA 90 bp | CAAAGGTTCCATCCGAGGAGTGAGGAAGAAGGTATCCCTGGGGTCTaGGTGCAGCATGTCGGCGCTGGGTTCCCCCTGCGGCGGGAATCC | + |
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Preference number: 5 (lower is better) Translates to: QRFHPRSEEEGIPGV*VQHVGAGFPLRRES Trigger: GGATTCCCGCCGCAGGGGGAACCCAGCGCCGACATGCTGCACCCAGACCCCAGGGATACCTTCTTCCTCACTCCTCGGATGGAACCTTTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS CCA 90 bp | TTCTGTGACCTTGGGGCCACTGGTCCTATAGCCCTGGGTCCGAGGTaGATGTGGGGGTACCCGCAGCTGTACTCTGGGCAGAGGCTTGGG | + |
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Preference number: 5 (lower is better) Translates to: FCDLGATGPIALGPR*MWGYPQLYSGQRLG Trigger: CCCAAGCCTCTGCCCAGAGTACAGCTGCGGGTACCCCCACATCCACCTCGGACCCAGGGCTATAGGACCAGTGGCCCCAAGGTCACAGAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS CCA 90 bp | GGCACCATGAGTCCCTGTCCATGTAACTGGCCCTCCCGGCCTCCCTaGCTGGTCTGGGCCCTGACTGGGGGCTTTAGTTCTGTGACCTTG | + |
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Preference number: 5 (lower is better) Translates to: GTMSPCPCNWPSRPP*LVWALTGGFSSVTL Trigger: CAAGGTCACAGAACTAAAGCCCCCAGTCAGGGCCCAGACCAGCCAGGGAGGCCGGGAGGGCCAGTTACATGGACAGGGACTCATGGTGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS CCA 90 bp | AGTCTCGCAATGCCCTCGGGGAAGCCCGCTGTCCAGGTCGGACCCTaGTCACGTACACCTTTGAAGGCGACTTCTCCACAGTTCGGGGAG | + |
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Preference number: 5 (lower is better) Translates to: SLAMPSGKPAVQVGP*SRTPLKATSPQFGE Trigger: CTCCCCGAACTGTGGAGAAGTCGCCTTCAAAGGTGTACGTGACCAGGGTCCGACCTGGACAGCGGGCTTCCCCGAGGGCATTGCGAGACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR CAA 90 bp | CCTGCCACGAGCGCCACCTATCTGCAGTCCCAGAGGAGGCTTTTAGGGACCAGCGCTCCCTCCGCGCTCTaGCAATTCCAGTTCCAGGAG | + |
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Preference number: 5 (lower is better) Translates to: PATSATYLQSQRRLLGTSAPSAL*QFQFQE Trigger: CTCCTGGAACTGGAATTGCAAGAGCGCGGAGGGAGC...GCTGGTCCCTAAAAGCCTCCTCTGGGACTGCAGATAGGTGGCGCTCGTGGCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS TCA 90 bp | AACAGCATGTTTGGGCCCCGCCCCTCGGGCGCCTGCTCCTCTTCATaGCTTTCACTCGAGTCCTCCGACCTCTGTGTGGACGATGGCACT | + |
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Preference number: 5 (lower is better) Translates to: NSMFGPRPSGACSSS*LSLESSDLCVDDGT Trigger: AGTGCCATCGTCCACACAGAGGTCGGAGGACTCGAGTGAAAGTCATGAAGAGGAGCAGGCGCCCGAGGGGCGGGGCCCAAACATGCTGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS CCA 90 bp | GGTGCGGTCCACTCGGAGCCAGTCTTGCCCACAAAGGCTACAAGCTaGGCGGCTGCTGGGCTCTCATCCAAACTCAGCCAGAACTCAGAG | + |
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Preference number: 5 (lower is better) Translates to: GAVHSEPVLPTKATS*AAAGLSSKLSQNSE Trigger: CTCTGAGTTCTGGCTGAGTTTGGATGAGAGCCCAGCAGCCGCCCAGCTTGTAGCCTTTGTGGGCAAGACTGGCTCCGAGTGGACCGCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR CAA 90 bp | GAGCCTGAATCAAGCTCAGGACGCAGCTTCTACCTGCTGCACCAAGACCCGGTGAACGTGCGCTGCCAGTaGATGGCATCCTCCCGCCAG | + |
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Preference number: 5 (lower is better) Translates to: EPESSSGRSFYLLHQDPVNVRCQ*MASSRQ Trigger: CTGGCGGGAGGATGCCATCAACTGGCAGCGCACGTT...CACCGGGTCTTGGTGCAGCAGGTAGAAGCTGCGTCCTGAGCTTGATTCAGGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR CAA 90 bp | GAGGCTTTTAGGGACCAGCACAGGTGGTGGCAGAGCCTGAATCAAGCTCAGGACGGGGCGAAGGCCAGCTaGCCCTCCACGCAATGCTTG | + |
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Preference number: 5 (lower is better) Translates to: EAFRDQHRWWQSLNQAQDGAKAS*PSTQCL Trigger: CAAGCATTGCGTGGAGGGCAAGCTGGCCTTCGCCCC...GTCCTGAGCTTGATTCAGGCTCTGCCACCACCTGTGCTGGTCCCTAAAAGCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS GCA 90 bp | CGTCTCAGGTGGCCCACAGCACCTCCACACCAGTCCTCAAACACGTaGAGGTTCACCTGTCCTTTGAACTCTTCCCGCCATGGGGGTGTC | + |
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Preference number: 5 (lower is better) Translates to: RLRWPTAPPHQSSNT*RFTCPLNSSRHGGV Trigger: GACACCCCCATGGCGGGAAGAGTTCAAAGGACAGGTGAACCTGCACGTGTTTGAGGACTGGTGTGGAGGTGCTGTGGGCCACCTGAGACG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS CCA 90 bp | CCTGCTCCTCTTCATGACTTTCACTCGAGTCCTCCGACCTCTGTGTaGACGATGGCACTCGGACTCCGCGGCTATCGGTCACACCGGTCA | + |
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Preference number: 5 (lower is better) Translates to: PAPLHDFHSSPPTSV*TMALGLRGYRSHRS Trigger: TGACCGGTGTGACCGATAGCCGCGGAGTCCGAGTGCCATCGTCCACACAGAGGTCGGAGGACTCGAGTGAAAGTCATGAAGAGGAGCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS CCA 90 bp | TGCAGGTTCACCTGTCCTTTGAACTCTTCCCGCCATGGGGGTGTCTaGTGGGTGAGGTTCAGTGGGGGTGGCTTCCTAGGTCCTCCAGGA | + |
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Preference number: 5 (lower is better) Translates to: CRFTCPLNSSRHGGV*WVRFSGGGFLGPPG Trigger: TCCTGGAGGACCTAGGAAGCCACCCCCACTGAACCTCACCCACCAGACACCCCCATGGCGGGAAGAGTTCAAAGGACAGGTGAACCTGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR CAA 90 bp | CACAGAAATCATCAGGGGGTGTGGGGACCAAGGTGCCTGCCCTGCCACGAGCGCAGCCAGAACTCAGAGTaGTCATCCGAAGCCACAGAG | + |
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Preference number: 5 (lower is better) Translates to: HRNHQGVWGPRCLPCHERSQNSE*SSEATE Trigger: CTCTGTGGCTTCGGATGACAACTCTGAGTTCTGGCT...GCGCTCGTGGCAGGGCAGGCACCTTGGTCCCCACACCCCCTGATGATTTCTGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR CAA 90 bp | ATCAAGCTCAGGACGCAGCTTCTACCTGCTGCACCAAGACCCGGTGGCCCAGAGCCCTCCACGCAATGCTaGCGGATGCTGTCCAGGATA | + |
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Preference number: 5 (lower is better) Translates to: IKLRTQLLPAAPRPGGPEPSTQC*RMLSRI Trigger: TATCCTGGACAGCATCCGCAAGCATTGCGTGGAGGG...CTCTGGGCCACCGGGTCTTGGTGCAGCAGGTAGAAGCTGCGTCCTGAGCTTGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS CCA 90 bp | CTCTTCATGACTTTCACTCGAGTCCTCCGACCTCTGTGTGGACGATaGCACTCGGACTCCGCGGCTATCGGTCACACCGGTCAGCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: LFMTFTRVLRPLCGR*HSDSAAIGHTGQLL Trigger: GAGAAGCTGACCGGTGTGACCGATAGCCGCGGAGTCCGAGTGCCATCGTCCACACAGAGGTCGGAGGACTCGAGTGAAAGTCATGAAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS CCA 90 bp | TTTGAACTCTTCCCGCCATGGGGGTGTCTGGTGGGTGAGGTTCAGTaGGGGTGGCTTCCTAGGTCCTCCAGGAAACAGCATGTTTGGGCC | + |
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Preference number: 5 (lower is better) Translates to: FELFPPWGCLVGEVQ*GWLPRSSRKQHVWA Trigger: GGCCCAAACATGCTGTTTCCTGGAGGACCTAGGAAGCCACCCCCACTGAACCTCACCCACCAGACACCCCCATGGCGGGAAGAGTTCAAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS CCA 90 bp | AGGTTCACCTGTCCTTTGAACTCTTCCCGCCATGGGGGTGTCTGGTaGGTGAGGTTCAGTGGGGGTGGCTTCCTAGGTCCTCCAGGAAAC | + |
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Preference number: 5 (lower is better) Translates to: RFTCPLNSSRHGGVW*VRFSGGGFLGPPGN Trigger: GTTTCCTGGAGGACCTAGGAAGCCACCCCCACTGAACCTCACCCACCAGACACCCCCATGGCGGGAAGAGTTCAAAGGACAGGTGAACCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR CAA 90 bp | CCAGCACAGGTGGTGGCAGAGCCTGAATCAAGCTCAGGACGCAGCTTCTACCTGCACTCGGAGCCAGTCTaGCCCACAAAGGCTACAAGC | + |
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Preference number: 5 (lower is better) Translates to: PAQVVAEPESSSGRSFYLHSEPV*PTKATS Trigger: GCTTGTAGCCTTTGTGGGCAAGACTGGCTCCGAGTG...CAGGTAGAAGCTGCGTCCTGAGCTTGATTCAGGCTCTGCCACCACCTGTGCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR CAA 90 bp | CCTGCCACGAGCGCCACCTATCTGCAGTCCCAGAGGAGGCTTTTAGGGACCAGCTGGTCACGTACACCTTaGAAGGCGACTTCTCCACAG | + |
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Preference number: 5 (lower is better) Translates to: PATSATYLQSQRRLLGTSWSRTP*KATSPQ Trigger: CTGTGGAGAAGTCGCCTTCAAAGGTGTACGTGACCA...GCTGGTCCCTAAAAGCCTCCTCTGGGACTGCAGATAGGTGGCGCTCGTGGCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS TCA 90 bp | AGCGAGAAGCGCCCGCCATGCTTTGCATTTAGCCGCTCCATGTACTaGGCCACTACATCCACCGCTTCGGCCTCAGGAAGTTGCAGGTTC | + |
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Preference number: 5 (lower is better) Translates to: SEKRPPCFAFSRSMY*ATTSTASASGSCRF Trigger: GAACCTGCAACTTCCTGAGGCCGAAGCGGTGGATGTAGTGGCTCAGTACATGGAGCGGCTAAATGCAAAGCATGGCGGGCGCTTCTCGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS GCA 90 bp | GATGCTGCTGGGGTCCTCCACGGCATCCACTCCAGTTTGCAGGCCTaGAGAGCGCTCGAAGTTTCCAGTTCGTTTCAAGTACTGGTACCG | + |
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Preference number: 5 (lower is better) Translates to: DAAGVLHGIHSSLQA*RALEVSSSFQVLVP Trigger: CGGTACCAGTACTTGAAACGAACTGGAAACTTCGAGCGCTCTGCAGGCCTGCAAACTGGAGTGGATGCCGTGGAGGACCCCAGCAGCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS GCA 90 bp | CTCTCCACCAAGATGATGTTGAAGTACGAGTCCCCCGTATGCACATaGAGCGCGGTCATATCTGCCAGGAACTGCACTACCCAGCGCGCC | + |
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Preference number: 5 (lower is better) Translates to: LSTKMMLKYESPVCT*SAVISARNCTTQRA Trigger: GGCGCGCTGGGTAGTGCAGTTCCTGGCAGATATGACCGCGCTGCATGTGCATACGGGGGACTCGTACTTCAACATCATCTTGGTGGAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210517.2 |
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| CDS GCA 90 bp | AAGTCCACCAAGATGATGTTGAAGTACGAGTCCCCCGTATGCACATaGAGCGCGGTCATATCTGCCAGGAACTGCACTACCCAGCGCGCC | + |
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Preference number: 5 (lower is better) Translates to: KSTKMMLKYESPVCT*SAVISARNCTTQRA Trigger: GGCGCGCTGGGTAGTGCAGTTCCTGGCAGATATGACCGCGCTGCATGTGCATACGGGGGACTCGTACTTCAACATCATCTTGGTGGACTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR CAA 90 bp | ATCAAGCTCAGGACGCAGCTTCTACCTGCTGCACCAAGACCCGGTGGCCCAGAGAGGAAGTCATCTGGGTaGAGGAAGAGGAAGGCTCTA | + |
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Preference number: 5 (lower is better) Translates to: IKLRTQLLPAAPRPGGPERKSSG*RKRKAL Trigger: TAGAGCCTTCCTCTTCCTCAACCCAGATGACTTCCT...CTCTGGGCCACCGGGTCTTGGTGCAGCAGGTAGAAGCTGCGTCCTGAGCTTGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR CAA 90 bp | GAGGCTTTTAGGGACCAGCACAGGTGGTGGCAGAGCCTGAATCAAGCTCAGGACTTCGGCCTCAGGAAGTaGCAGGTTCCCGGATACGTT | + |
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Preference number: 5 (lower is better) Translates to: EAFRDQHRWWQSLNQAQDFGLRK*QVPGYV Trigger: AACGTATCCGGGAACCTGCAACTTCCTGAGGCCGAA...GTCCTGAGCTTGATTCAGGCTCTGCCACCACCTGTGCTGGTCCCTAAAAGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR CAA 90 bp | CTGAATCAAGCTCAGGACGCAGCTTCTACCTGCTGCACCAAGACCCGGTGGCCCTCCACCAAGATGATGTaGAAGTACGAGTCCCCCGTA | + |
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Preference number: 5 (lower is better) Translates to: LNQAQDAASTCCTKTRWPSTKMM*KYESPV Trigger: TACGGGGGACTCGTACTTCAACATCATCTTGGTGGA...GGGCCACCGGGTCTTGGTGCAGCAGGTAGAAGCTGCGTCCTGAGCTTGATTCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048002.7 ENSMUST00000210517.2 |
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| CDS GCA 90 bp | AGGAAAACGATGCTGCTGGGGTCCTCCACGGCATCCACTCCAGTTTaGAGGCCTGCAGAGCGCTCGAAGTTTCCAGTTCGTTTCAAGTAC | + |
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Preference number: 5 (lower is better) Translates to: RKTMLLGSSTASTPV*RPAERSKFPVRFKY Trigger: GTACTTGAAACGAACTGGAAACTTCGAGCGCTCTGCAGGCCTGCAAACTGGAGTGGATGCCGTGGAGGACCCCAGCAGCATCGTTTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS GCA 90 bp | CGAAGCCTCTCCACCAAGATGATGTTGAAGTACGAGTCCCCCGTATaGACATGCAGCGCGGTCATATCTGCCAGGAACTGCACTACCCAG | + |
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Preference number: 5 (lower is better) Translates to: RSLSTKMMLKYESPV*TCSAVISARNCTTQ Trigger: CTGGGTAGTGCAGTTCCTGGCAGATATGACCGCGCTGCATGTGCATACGGGGGACTCGTACTTCAACATCATCTTGGTGGAGAGGCTTCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210517.2 |
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| CDS-3UTR CAA 90 bp | AGCCTGAATCAAGCTCAGGACGCAGCTTCTACCTGCTGCACCAAGACCCGGTGGTCCACCAAGATGATGTaGAAGTACGAGTCCCCCGTA | + |
|
Preference number: 5 (lower is better) Translates to: SLNQAQDAASTCCTKTRWSTKMM*KYESPV Trigger: TACGGGGGACTCGTACTTCAACATCATCTTGGTGGA...CCACCGGGTCTTGGTGCAGCAGGTAGAAGCTGCGTCCTGAGCTTGATTCAGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048002.7 ENSMUST00000210517.2 |
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| CDS GCA 90 bp | CCCAGTCCTCGCCTCCCCACTGGTCACGGAACTCCTCAGTGTTCATaGCTCCTACTCTGTCAAAGTCTGATTTGTAGATCCCAAAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: PSPRLPTGHGTPQCS*LLLCQSLICRSQRG Trigger: GCCTCTTTGGGATCTACAAATCAGACTTTGACAGAGTAGGAGGCATGAACACTGAGGAGTTCCGTGACCAGTGGGGAGGCGAGGACTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS GCA 90 bp | CTCTCAAAGTCCACCAAGATGATGTTGAAGTACGAGTCCCCCGTATaGACATGCAGCGCGGTCATATCTGCCAGGAACTGCACTACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LSKSTKMMLKYESPV*TCSAVISARNCTTQ Trigger: CTGGGTAGTGCAGTTCCTGGCAGATATGACCGCGCTGCATGTGCATACGGGGGACTCGTACTTCAACATCATCTTGGTGGACTTTGAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS TCA 90 bp | TTCCACTTAGGGGACACAGCTAACTTTGTCACCGTAGTACGAGTGTaGGGAAAGAGTGGGAAGTGCAGATTCCGTCTCAGGTGGCCCACA | + |
|
Preference number: 5 (lower is better) Translates to: FHLGDTANFVTVVRV*GKSGKCRFRLRWPT Trigger: TGTGGGCCACCTGAGACGGAATCTGCACTTCCCACTCTTTCCTCACACTCGTACTACGGTGACAAAGTTAGCTGTGTCCCCTAAGTGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS CCA 90 bp | GTTGTCATCCGAAGCCACAGAGAACTGGATGTCTCCATCTCTGGCTaGGTGGATGAAGCCAAAAATCCGGAGTCCATAGTTCTTCCACTT | + |
|
Preference number: 5 (lower is better) Translates to: VVIRSHRELDVSISG*VDEAKNPESIVLPL Trigger: AAGTGGAAGAACTATGGACTCCGGATTTTTGGCTTCATCCACCCAGCCAGAGATGGAGACATCCAGTTCTCTGTGGCTTCGGATGACAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS-3UTR CAA 90 bp | AAATTTCACAGAAATCATCAGGGGGTGTGGGGACCAAGGTGCCTGCCCTGCCACTCCTCTCCCTCCTCCTaGTCCATTTTCATGTATTTA | + |
|
Preference number: 5 (lower is better) Translates to: KFHRNHQGVWGPRCLPCHSSPSS*SIFMYL Trigger: TAAATACATGAAAATGGACAAGGAGGAGGGAGAGGA...GTGGCAGGGCAGGCACCTTGGTCCCCACACCCCCTGATGATTTCTGTGAAATTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS TCA 90 bp | TCAGAGATGACTCATCTGTGTACAGGGAAATGTGAGCAGAATCAATaGTCTCGAACTTCAGACCAGGCAGGAAAGCTCGCCAACCCACTT | + |
|
Preference number: 5 (lower is better) Translates to: SEMTHLCTGKCEQNQ*SRTSDQAGKLANPL Trigger: AAGTGGGTTGGCGAGCTTTCCTGCCTGGTCTGAAGTTCGAGATCATTGATTCTGCTCACATTTCCCTGTACACAGATGAGTCATCTCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS CAA 90 bp | AGGAGCTCGAAGTCCATGGCGCCCACGCTGAACGTGCGCTGCCAGTaGATGGCATCCTCCCGCCAGCGACCCAGGGGCCGCCCAGCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: RSSKSMAPTLNVRCQ*MASSRQRPRGRPAA Trigger: GGCCGCTGGGCGGCCCCTGGGTCGCTGGCGGGAGGATGCCATCAACTGGCAGCGCACGTTCAGCGTGGGCGCCATGGACTTCGAGCTCCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS CAA 72 bp | AAGTCCATGGCGCCCACGCTGAACGTGCGCTGCCAGTaGATGGCATCCTCCCGCCAGCGACCCAGGGGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: KSMAPTLNVRCQ*MASSRQRPRGR Trigger: GCGGCCCCTGGGTCGCTGGCGGGAGGATGCCATCAACTGGCAGCGCACGTTCAGCGTGGGCGCCATGGACTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS CCA 72 bp | CAGATGCAAAGGCCGGCAGAGCTCTGGGCGACTGTCTaGGTGGATCGAGGCGGCTGGAGGCGGCTCGGGACT | + |
|
Preference number: 6 (lower is better) Translates to: QMQRPAELWATV*VDRGGWRRLGT Trigger: AGTCCCGAGCCGCCTCCAGCCGCCTCGATCCACCCAGACAGTCGCCCAGAGCTCTGCCGGCCTTTGCATCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS CCA 72 bp | CTGACGCCAGGCCAGATGCAAAGGCCGGCAGAGCTCTaGGCGACTGTCTGGGTGGATCGAGGCGGCTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: LTPGQMQRPAEL*ATVWVDRGGWR Trigger: CCTCCAGCCGCCTCGATCCACCCAGACAGTCGCCCAGAGCTCTGCCGGCCTTTGCATCTGGCCTGGCGTCAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS GCA 72 bp | AGCTCGAAGTCCATGGCGCCCACGCTGAACGTGCGCTaGCAGTTGATGGCATCCTCCCGCCAGCGACCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SSKSMAPTLNVR*QLMASSRQRPR Trigger: CCTGGGTCGCTGGCGGGAGGATGCCATCAACTGGCAGCGCACGTTCAGCGTGGGCGCCATGGACTTCGAGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS CCA 72 bp | AGGTATCCCTGGGGTCTGGGTGCAGCATGTCGGCGCTaGGTTCCCCCTGCGGCGGGAATCCTCCTATGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: RYPWGLGAACRR*VPPAAGILLCG Trigger: GCCACATAGGAGGATTCCCGCCGCAGGGGGAACCCAGCGCCGACATGCTGCACCCAGACCCCAGGGATACCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS CCA 72 bp | TCCGAGGTGGATGTGGGGGTACCCGCAGCTGTACTCTaGGCAGAGGCTTGGGGCGCAGGAAGACGCCAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: SEVDVGVPAAVL*AEAWGAGRRQG Trigger: TCCCTGGCGTCTTCCTGCGCCCCAAGCCTCTGCCCAGAGTACAGCTGCGGGTACCCCCACATCCACCTCGGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS CCA 72 bp | GAGCTCTGGGCGACTGTCTGGGTGGATCGAGGCGGCTaGAGGCGGCTCGGGACTTTCTCCATCTTCGTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: ELWATVWVDRGG*RRLGTFSIFVP Trigger: GGGGACGAAGATGGAGAAAGTCCCGAGCCGCCTCCAGCCGCCTCGATCCACCCAGACAGTCGCCCAGAGCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS CCA 72 bp | TGCAAAGGCCGGCAGAGCTCTGGGCGACTGTCTGGGTaGATCGAGGCGGCTGGAGGCGGCTCGGGACTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: CKGRQSSGRLSG*IEAAGGGSGLS Trigger: AGAAAGTCCCGAGCCGCCTCCAGCCGCCTCGATCCACCCAGACAGTCGCCCAGAGCTCTGCCGGCCTTTGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS CCA 72 bp | GGGTGGCTTCCTAGGTCCTCCAGGAAACAGCATGTTTaGGCCCCGCCCCTCGGGCGCCTGCTCCTCTTCATG | + |
|
Preference number: 6 (lower is better) Translates to: GWLPRSSRKQHV*APPLGRLLLFM Trigger: CATGAAGAGGAGCAGGCGCCCGAGGGGCGGGGCCCAAACATGCTGTTTCCTGGAGGACCTAGGAAGCCACCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS CCA 72 bp | TCGGGCTGGCTGTCGTTCCAGTGGAGGCTGCTGGGGTaGGGGTCCTGTGGCTCTGCTGTACAGATGCATCGG | + |
|
Preference number: 6 (lower is better) Translates to: SGWLSFQWRLLG*GSCGSAVQMHR Trigger: CCGATGCATCTGTACAGCAGAGCCACAGGACCCCCACCCCAGCAGCCTCCACTGGAACGACAGCCAGCCCGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS CCA 72 bp | CTTGGGGCCACTGGTCCTATAGCCCTGGGTCCGAGGTaGATGTGGGGGTACCCGCAGCTGTACTCTGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LGATGPIALGPR*MWGYPQLYSGQ Trigger: CTGCCCAGAGTACAGCTGCGGGTACCCCCACATCCACCTCGGACCCAGGGCTATAGGACCAGTGGCCCCAAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS CAA 72 bp | CAGCCCAGACGCATGACCACAGGGGCGAAGGCCAGCTaGCCCTCCACGCAATGCTTGCGGATGCTGTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: QPRRMTTGAKAS*PSTQCLRMLSR Trigger: CCTGGACAGCATCCGCAAGCATTGCGTGGAGGGCAAGCTGGCCTTCGCCCCTGTGGTCATGCGTCTGGGCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS TCA 72 bp | TTTGGGCCCCGCCCCTCGGGCGCCTGCTCCTCTTCATaGCTTTCACTCGAGTCCTCCGACCTCTGTGTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: FGPRPSGACSSS*LSLESSDLCVD Trigger: GTCCACACAGAGGTCGGAGGACTCGAGTGAAAGTCATGAAGAGGAGCAGGCGCCCGAGGGGCGGGGCCCAAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS GCA 72 bp | GGGGCCCAATTCAGTGCCCGGGAGTGTCTGAGGGTCTaGTCGTCCAGAGGACTAGTTGTAGGTGGGGTCGGG | + |
|
Preference number: 6 (lower is better) Translates to: GAQFSARECLRV*SSRGLVVGGVG Trigger: CCCGACCCCACCTACAACTAGTCCTCTGGACGAGCAGACCCTCAGACACTCCCGGGCACTGAATTGGGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS GCA 72 bp | TATTCGGATAGGCGCTGGCGGCTCCCTCCGCGCTCTTaGAATTCCAGTTCCAGGAGGAAGCGGCTCCCGCGT | + |
|
Preference number: 6 (lower is better) Translates to: YSDRRWRLPPRS*NSSSRRKRLPR Trigger: ACGCGGGAGCCGCTTCCTCCTGGAACTGGAATTGCAAGAGCGCGGAGGGAGCCGCCAGCGCCTATCCGAATA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS CCA 72 bp | TGGGTTCCCCCTGCGGCGGGAATCCTCCTATGTGGCTaGCTGGAGACTGAGGCACATGGGCCACATGGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: WVPPAAGILLCG*LETEAHGPHGP Trigger: TGGACCATGTGGCCCATGTGCCTCAGTCTCCAGCCAGCCACATAGGAGGATTCCCGCCGCAGGGGGAACCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS CCA 72 bp | GCCACTGGTCCTATAGCCCTGGGTCCGAGGTGGATGTaGGGGTACCCGCAGCTGTACTCTGGGCAGAGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: ATGPIALGPRWM*GYPQLYSGQRL Trigger: AAGCCTCTGCCCAGAGTACAGCTGCGGGTACCCCCACATCCACCTCGGACCCAGGGCTATAGGACCAGTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS CCA 72 bp | CCATGTAACTGGCCCTCCCGGCCTCCCTGGCTGGTCTaGGCCCTGACTGGGGGCTTTAGTTCTGTGACCTTG | + |
|
Preference number: 6 (lower is better) Translates to: PCNWPSRPPWLV*ALTGGFSSVTL Trigger: CAAGGTCACAGAACTAAAGCCCCCAGTCAGGGCCCAGACCAGCCAGGGAGGCCGGGAGGGCCAGTTACATGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS CCA 72 bp | CCGGGCAACCGCAGGAAGACGTATTCGGATAGGCGCTaGCGGCTCCCTCCGCGCTCTTGCAATTCCAGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: PGNRRKTYSDRR*RLPPRSCNSSS Trigger: GGAACTGGAATTGCAAGAGCGCGGAGGGAGCCGCCAGCGCCTATCCGAATACGTCTTCCTGCGGTTGCCCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS CAA 90 bp | CGGGAGGCCATGAGCCGACGTGGCTTAGACACCTGGGAGCTGAACTaGGTGAATTCTCCAGGTGCGGTCCACTCGGAGCCAGTCTTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: REAMSRRGLDTWELN*VNSPGAVHSEPVLP Trigger: GGGCAAGACTGGCTCCGAGTGGACCGCACCTGGAGAATTCACCAAGTTCAGCTCCCAGGTGTCTAAGCCACGTCGGCTCATGGCCTCCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS TCA 72 bp | CCGCTGTCCAGGTCGGACCCTGGTCACGTACACCTTTaGAGGCGACTTCTCCACAGTTCGGGGAGGTGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: PLSRSDPGHVHL*RRLLHSSGRWS Trigger: GCTCCACCTCCCCGAACTGTGGAGAAGTCGCCTTCAAAGGTGTACGTGACCAGGGTCCGACCTGGACAGCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS GCA 72 bp | CGCGTGCAGAGTCGCGGCGCTTCTCCACGTTCACGATaGGTAGAAGCGAGAAGCGCCCGCCATGCTTTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: RVQSRGASPRSR*VEARSARHALH Trigger: ATGCAAAGCATGGCGGGCGCTTCTCGCTTCTACGCATCGTGAACGTGGAGAAGCGCCGCGACTCTGCACGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS CCA 72 bp | ATGCCCTCGGGGAAGCCCGCTGTCCAGGTCGGACCCTaGTCACGTACACCTTTGAAGGCGACTTCTCCACAG | + |
|
Preference number: 6 (lower is better) Translates to: MPSGKPAVQVGP*SRTPLKATSPQ Trigger: CTGTGGAGAAGTCGCCTTCAAAGGTGTACGTGACCAGGGTCCGACCTGGACAGCGGGCTTCCCCGAGGGCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS CAA 72 bp | CCCGCTGTCCAGGTCGGACCCTGGTCACGTACACCTTaGAAGGCGACTTCTCCACAGTTCGGGGAGGTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: PAVQVGPWSRTP*KATSPQFGEVE Trigger: CTCCACCTCCCCGAACTGTGGAGAAGTCGCCTTCAAAGGTGTACGTGACCAGGGTCCGACCTGGACAGCGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS CCA 72 bp | ACTTTCACTCGAGTCCTCCGACCTCTGTGTGGACGATaGCACTCGGACTCCGCGGCTATCGGTCACACCGGT | + |
|
Preference number: 6 (lower is better) Translates to: TFTRVLRPLCGR*HSDSAAIGHTG Trigger: ACCGGTGTGACCGATAGCCGCGGAGTCCGAGTGCCATCGTCCACACAGAGGTCGGAGGACTCGAGTGAAAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS CAA 90 bp | GAGCTTCCACAGCCCAGACGCATGACCACAGGGGCGAAGGCCAGCTaGCCCTCCACGCAATGCTTGCGGATGCTGTCCAGGATATTAGGT | + |
|
Preference number: 6 (lower is better) Translates to: ELPQPRRMTTGAKAS*PSTQCLRMLSRILG Trigger: ACCTAATATCCTGGACAGCATCCGCAAGCATTGCGTGGAGGGCAAGCTGGCCTTCGCCCCTGTGGTCATGCGTCTGGGCTGTGGAAGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS GCA 72 bp | CGAGTCCCCCGTATGCACATGCAGCGCGGTCATATCTaGCAGGAACTGCACTACCCAGCGCGCCTGATTCTT | + |
|
Preference number: 6 (lower is better) Translates to: RVPRMHMQRGHI*QELHYPARLIL Trigger: AAGAATCAGGCGCGCTGGGTAGTGCAGTTCCTGGCAGATATGACCGCGCTGCATGTGCATACGGGGGACTCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048002.7 ENSMUST00000210517.2 |
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| CDS GCA 72 bp | ACCACAGGGGCGAAGGCCAGCTTGCCCTCCACGCAATaGTTGCGGATGCTGTCCAGGATATTAGGTGGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: TTGAKASLPSTQ*LRMLSRILGGK Trigger: CTTCCCACCTAATATCCTGGACAGCATCCGCAAGCATTGCGTGGAGGGCAAGCTGGCCTTCGCCCCTGTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS CCA 72 bp | TGTCCTTTGAACTCTTCCCGCCATGGGGGTGTCTGGTaGGTGAGGTTCAGTGGGGGTGGCTTCCTAGGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: CPLNSSRHGGVW*VRFSGGGFLGP Trigger: AGGACCTAGGAAGCCACCCCCACTGAACCTCACCCACCAGACACCCCCATGGCGGGAAGAGTTCAAAGGACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS CCA 72 bp | ACCTGTCCTTTGAACTCTTCCCGCCATGGGGGTGTCTaGTGGGTGAGGTTCAGTGGGGGTGGCTTCCTAGGT | + |
|
Preference number: 6 (lower is better) Translates to: TCPLNSSRHGGV*WVRFSGGGFLG Trigger: ACCTAGGAAGCCACCCCCACTGAACCTCACCCACCAGACACCCCCATGGCGGGAAGAGTTCAAAGGACAGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS CAA 72 bp | ACAGGGGCGAAGGCCAGCTTGCCCTCCACGCAATGCTaGCGGATGCTGTCCAGGATATTAGGTGGGAAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: TGAKASLPSTQC*RMLSRILGGKW Trigger: CCACTTCCCACCTAATATCCTGGACAGCATCCGCAAGCATTGCGTGGAGGGCAAGCTGGCCTTCGCCCCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS TCA 72 bp | TTTCCACTGAGGAGTTCAAGTCCACTGTGGGCACCATaGGTCCCTGTCCATGTAACTGGCCCTCCCGGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: FPLRSSSPLWAP*VPVHVTGPPGL Trigger: GAGGCCGGGAGGGCCAGTTACATGGACAGGGACTCATGGTGCCCACAGTGGACTTGAACTCCTCAGTGGAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS TCA 72 bp | CGCCCGCCATGCTTTGCATTTAGCCGCTCCATGTACTaGGCCACTACATCCACCGCTTCGGCCTCAGGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: RPPCFAFSRSMY*ATTSTASASGS Trigger: ACTTCCTGAGGCCGAAGCGGTGGATGTAGTGGCTCAGTACATGGAGCGGCTAAATGCAAAGCATGGCGGGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS TCA 72 bp | TTTCCAGTTCGTTTCAAGTACTGGTACCGAGGTAGCTaGGCCGCACGCAGGGCCCGCTCCACATCCATGTCC | + |
|
Preference number: 6 (lower is better) Translates to: FPVRFKYWYRGS*AARRARSTSMS Trigger: GGACATGGATGTGGAGCGGGCCCTGCGTGCGGCTCAGCTACCTCGGTACCAGTACTTGAAACGAACTGGAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS CAA 72 bp | ATGAGCCGACGTGGCTTAGACACCTGGGAGCTGAACTaGGTGAATTCTCCAGGTGCGGTCCACTCGGAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: MSRRGLDTWELN*VNSPGAVHSEP Trigger: TGGCTCCGAGTGGACCGCACCTGGAGAATTCACCAAGTTCAGCTCCCAGGTGTCTAAGCCACGTCGGCTCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS CAA 72 bp | CTGAGCCACTACATCCACCGCTTCGGCCTCAGGAAGTaGCAGGTTCCCGGATACGTTACAGCGCAGGTCGTT | + |
|
Preference number: 6 (lower is better) Translates to: LSHYIHRFGLRK*QVPGYVTAQVV Trigger: AACGACCTGCGCTGTAACGTATCCGGGAACCTGCAACTTCCTGAGGCCGAAGCGGTGGATGTAGTGGCTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS CAA 90 bp | CTCCATGTACTGAGCCACTACATCCACCGCTTCGGCCTCAGGAAGTaGCAGGTTCCCGGATACGTTACAGCGCAGGTCGTTCCAGTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: LHVLSHYIHRFGLRK*QVPGYVTAQVVPVR Trigger: TCTGACTGGAACGACCTGCGCTGTAACGTATCCGGGAACCTGCAACTTCCTGAGGCCGAAGCGGTGGATGTAGTGGCTCAGTACATGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS GCA 72 bp | TGGCCCACAGCACCTCCACACCAGTCCTCAAACACGTaGAGGTTCACCTGTCCTTTGAACTCTTCCCGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: WPTAPPHQSSNT*RFTCPLNSSRH Trigger: ATGGCGGGAAGAGTTCAAAGGACAGGTGAACCTGCACGTGTTTGAGGACTGGTGTGGAGGTGCTGTGGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS GCA 72 bp | GGGGTCCTCCACGGCATCCACTCCAGTTTGCAGGCCTaGAGAGCGCTCGAAGTTTCCAGTTCGTTTCAAGTA | + |
|
Preference number: 6 (lower is better) Translates to: GVLHGIHSSLQA*RALEVSSSFQV Trigger: TACTTGAAACGAACTGGAAACTTCGAGCGCTCTGCAGGCCTGCAAACTGGAGTGGATGCCGTGGAGGACCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS CAA 90 bp | GAGGAAAACGATGCTGCTGGGGTCCTCCACGGCATCCACTCCAGTTaGCAGGCCTGCAGAGCGCTCGAAGTTTCCAGTTCGTTTCAAGTA | + |
|
Preference number: 6 (lower is better) Translates to: EENDAAGVLHGIHSS*QACRALEVSSSFQV Trigger: TACTTGAAACGAACTGGAAACTTCGAGCGCTCTGCAGGCCTGCAAACTGGAGTGGATGCCGTGGAGGACCCCAGCAGCATCGTTTTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS GCA 72 bp | TCCACCAAGATGATGTTGAAGTACGAGTCCCCCGTATaGACATGCAGCGCGGTCATATCTGCCAGGAACTGC | + |
|
Preference number: 6 (lower is better) Translates to: STKMMLKYESPV*TCSAVISARNC Trigger: GCAGTTCCTGGCAGATATGACCGCGCTGCATGTGCATACGGGGGACTCGTACTTCAACATCATCTTGGTGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048002.7 ENSMUST00000210517.2 |
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| CDS CAA 72 bp | TCACGATGCGTAGAAGCGAGAAGCGCCCGCCATGCTTaGCATTTAGCCGCTCCATGTACTGAGCCACTACAT | + |
|
Preference number: 6 (lower is better) Translates to: SRCVEARSARHA*HLAAPCTEPLH Trigger: ATGTAGTGGCTCAGTACATGGAGCGGCTAAATGCAAAGCATGGCGGGCGCTTCTCGCTTCTACGCATCGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS CAA 72 bp | TCCATGTCCTCGCTCTCAAAGTCCACCAAGATGATGTaGAAGTACGAGTCCCCCGTATGCACATGCAGCGCG | + |
|
Preference number: 6 (lower is better) Translates to: SMSSLSKSTKMM*KYESPVCTCSA Trigger: CGCGCTGCATGTGCATACGGGGGACTCGTACTTCAACATCATCTTGGTGGACTTTGAGAGCGAGGACATGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS CAA 90 bp | CGCTCCACATCCATGTCCTCGCTCTCAAAGTCCACCAAGATGATGTaGAAGTACGAGTCCCCCGTATGCACATGCAGCGCGGTCATATCT | + |
|
Preference number: 6 (lower is better) Translates to: RSTSMSSLSKSTKMM*KYESPVCTCSAVIS Trigger: AGATATGACCGCGCTGCATGTGCATACGGGGGACTCGTACTTCAACATCATCTTGGTGGACTTTGAGAGCGAGGACATGGATGTGGAGCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS TCA 72 bp | ACTGTAGTCCTTGGTATCTGGCTATGGGGAAATCCTTaGGGATATAGGTGGGGGCATAGGCACAGGGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: TVVLGIWLWGNP*GYRWGHRHRAP Trigger: TGGAGCCCTGTGCCTATGCCCCCACCTATATCCTCAAGGATTTCCCCATAGCCAGATACCAAGGACTACAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS GCA 72 bp | AAGATGATGTTGAAGTACGAGTCCCCCGTATGCACATaGAGCGCGGTCATATCTGCCAGGAACTGCACTACC | + |
|
Preference number: 6 (lower is better) Translates to: KMMLKYESPVCT*SAVISARNCTT Trigger: GGTAGTGCAGTTCCTGGCAGATATGACCGCGCTGCATGTGCATACGGGGGACTCGTACTTCAACATCATCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048002.7 ENSMUST00000210517.2 |
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| CDS GCA 72 bp | CGCCTCCCCACTGGTCACGGAACTCCTCAGTGTTCATaGCTCCTACTCTGTCAAAGTCTGATTTGTAGATCC | + |
|
Preference number: 6 (lower is better) Translates to: RLPTGHGTPQCS*LLLCQSLICRS Trigger: GGATCTACAAATCAGACTTTGACAGAGTAGGAGGCATGAACACTGAGGAGTTCCGTGACCAGTGGGGAGGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS TCA 72 bp | CAGAGAACTGGATGTCTCCATCTCTGGCTGGGTGGATaGAGCCAAAAATCCGGAGTCCATAGTTCTTCCACT | + |
|
Preference number: 6 (lower is better) Translates to: QRTGCLHLWLGG*SQKSGVHSSST Trigger: AGTGGAAGAACTATGGACTCCGGATTTTTGGCTTCATCCACCCAGCCAGAGATGGAGACATCCAGTTCTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS TCA 72 bp | ACTCATCTGTGTACAGGGAAATGTGAGCAGAATCAATaGTCTCGAACTTCAGACCAGGCAGGAAAGCTCGCC | + |
|
Preference number: 6 (lower is better) Translates to: THLCTGKCEQNQ*SRTSDQAGKLA Trigger: GGCGAGCTTTCCTGCCTGGTCTGAAGTTCGAGATCATTGATTCTGCTCACATTTCCCTGTACACAGATGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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| CDS TCA 72 bp | ATCTTCAGAGATGACTCATCTGTGTACAGGGAAATGTaGGCAGAATCAATGATCTCGAACTTCAGACCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: IFRDDSSVYREM*AESMISNFRPG Trigger: GCCTGGTCTGAAGTTCGAGATCATTGATTCTGCTCACATTTCCCTGTACACAGATGAGTCATCTCTGAAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048002.7 |
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