Pregenerated sensors for B4GALNT2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000013418Ensembl transcript IDs: ENSMUST00000038343.7
Found 105 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 72 bp | CAGCTTCTTTGTTCCCTGTTCCCCTTGTTAGGAGTCTaGTTTTGGTACCCTCCAATGTCCAATCCTACTATT | + |
|
Preference number: 3 (lower is better) Translates to: QLLCSLFPLLGV*FWYPPMSNPTI Trigger: AATAGTAGGATTGGACATTGGAGGGTACCAAAAGCAGACTCCTAACAAGGGGAACAGGGAACAAAGAAGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS-3UTR GCA 90 bp | TGTTCCCTGTTCCCCTTGTTAGGAGTCTGCTTTTGGTACCCTCCAATGTCCAATTATTCCCCTGCACGCTaGCACCCACCACATCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: CSLFPLLGVCFWYPPMSNYSPAR*HPPHPV Trigger: AACTGGATGTGGTGGGTGGCAGCGTGCAGGGGAATA...ATTGGACATTGGAGGGTACCAAAAGCAGACTCCTAACAAGGGGAACAGGGAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS-3UTR TCA 90 bp | TGTTCCCTGTTCCCCTTGTTAGGAGTCTGCTTTTGGTACCCTCCAATGTCCAATTGGTCACCAGGTTTCTaGTCTTCCTCTCAGGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CSLFPLLGVCFWYPPMSNWSPGF*SSSQVQ Trigger: CTGGACCTGAGAGGAAGATCAGAAACCTGGTGACCA...ATTGGACATTGGAGGGTACCAAAAGCAGACTCCTAACAAGGGGAACAGGGAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS-3UTR GCA 90 bp | TGTTCCCTGTTCCCCTTGTTAGGAGTCTGCTTTTGGTACCCTCCAATGTCCAATCACTGGGTCAACCCTTaGAGGCTCTGGAAACTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: CSLFPLLGVCFWYPPMSNHWVNP*RLWKLW Trigger: CCAAAGTTTCCAGAGCCTGCAAGGGTTGACCCAGTG...ATTGGACATTGGAGGGTACCAAAAGCAGACTCCTAACAAGGGGAACAGGGAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS-3UTR CCA 90 bp | CCCCTTGTTAGGAGTCTGCTTTTGGTACCCTCCAATGTCCAATCCTACTATTTTATCCGAAGGGGAGATTaGGTGGAGCCAGCAGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PLVRSLLLVPSNVQSYYFIRRGD*VEPAEV Trigger: CACCTCTGCTGGCTCCACCCAATCTCCCCTTCGGAT...AAAATAGTAGGATTGGACATTGGAGGGTACCAAAAGCAGACTCCTAACAAGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS-3UTR TCA 90 bp | CCCTTGTTAGGAGTCTGCTTTTGGTACCCTCCAATGTCCAATCCTACTATTTTTCTCTGGCCTCTGCCCTaGACCTCATCATCTGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: PLLGVCFWYPPMSNPTIFLWPLP*TSSSGT Trigger: TGTGCCAGATGATGAGGTTCAGGGCAGAGGCCAGAG...AAAAATAGTAGGATTGGACATTGGAGGGTACCAAAAGCAGACTCCTAACAAGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS-3UTR TCA 90 bp | CCCTTGTTAGGAGTCTGCTTTTGGTACCCTCCAATGTCCAATCCTACTATTTTTGTCAAGGGCCTGGAATaGTCCCCACCTCTGGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PLLGVCFWYPPMSNPTIFVKGLE*SPPLVK Trigger: CTTCACCAGAGGTGGGGATCATTCCAGGCCCTTGAC...AAAAATAGTAGGATTGGACATTGGAGGGTACCAAAAGCAGACTCCTAACAAGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS-3UTR GCA 90 bp | TGTTCCCTGTTCCCCTTGTTAGGAGTCTGCTTTTGGTACCCTCCAATGTCCAATGGGATGAGAATTGTATaGAGGGGCATCACCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: CSLFPLLGVCFWYPPMSNGMRIV*RGITST Trigger: TGTGGAGGTGATGCCCCTGCATACAATTCTCATCCC...ATTGGACATTGGAGGGTACCAAAAGCAGACTCCTAACAAGGGGAACAGGGAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS-3UTR GCA 90 bp | CCCTTGTTAGGAGTCTGCTTTTGGTACCCTCCAATGTCCAATCCTACTATTTTTGCTGCCTCTGGCCTCTaGCCTGAACCTCATCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: PLLGVCFWYPPMSNPTIFAASGL*PEPHHL Trigger: CAGATGATGAGGTTCAGGGCAGAGGCCAGAGGCAGC...AAAAATAGTAGGATTGGACATTGGAGGGTACCAAAAGCAGACTCCTAACAAGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS-3UTR CCA 90 bp | CCCCTTGTTAGGAGTCTGCTTTTGGTACCCTCCAATGTCCAATCCTACTATTTTATCACCTCCACACCATaGACTGGGTATCCGAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PLVRSLLLVPSNVQSYYFITSTP*TGYPKG Trigger: CCCCTTCGGATACCCAGTCCATGGTGTGGAGGTGAT...AAAATAGTAGGATTGGACATTGGAGGGTACCAAAAGCAGACTCCTAACAAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS-3UTR CCA 90 bp | CCCCTTGTTAGGAGTCTGCTTTTGGTACCCTCCAATGTCCAATCCTACTATTTTGATGTCTGGTGGAAATaGTCAGCTGCCTCTGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PLVRSLLLVPSNVQSYYFDVWWK*SAASGL Trigger: GAGGCCAGAGGCAGCTGACCATTTCCACCAGACATC...AAAATAGTAGGATTGGACATTGGAGGGTACCAAAAGCAGACTCCTAACAAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS-3UTR TCA 90 bp | CCCTTGTTAGGAGTCTGCTTTTGGTACCCTCCAATGTCCAATCCTACTATTTTTGGAGCCATGGAAACCTaGAGCTGGCAAAAGACACGC | + |
|
Preference number: 4 (lower is better) Translates to: PLLGVCFWYPPMSNPTIFGAMET*SWQKTR Trigger: GCGTGTCTTTTGCCAGCTTCAGGTTTCCATGGCTCC...AAAAATAGTAGGATTGGACATTGGAGGGTACCAAAAGCAGACTCCTAACAAGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS-3UTR TCA 90 bp | TGTTCCCTGTTCCCCTTGTTAGGAGTCTGCTTTTGGTACCCTCCAATGTCCAATGAGTTACAGTCACACTaGTTTTTGGGGAAGAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CSLFPLLGVCFWYPPMSNELQSH*FLGKSQ Trigger: CTGGCTCTTCCCCAAAAATCAGTGTGACTGTAACTC...ATTGGACATTGGAGGGTACCAAAAGCAGACTCCTAACAAGGGGAACAGGGAACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS-3UTR TCA 90 bp | CCCTTGTTAGGAGTCTGCTTTTGGTACCCTCCAATGTCCAATCCTACTATTTTTGATCCCCACCTCTGGTaGAGACAGCTCCCATTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PLLGVCFWYPPMSNPTIFDPHLW*RQLPFL Trigger: CAAGAATGGGAGCTGTCTTCACCAGAGGTGGGGATC...AAAAATAGTAGGATTGGACATTGGAGGGTACCAAAAGCAGACTCCTAACAAGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS-3UTR GCA 90 bp | TGTTCCCTGTTCCCCTTGTTAGGAGTCTGCTTTTGGTACCCTCCAATGTCCAATTTTCCAGGGGCTCCTTaGTGTCATCAGCTACAATCA | + |
|
Preference number: 4 (lower is better) Translates to: CSLFPLLGVCFWYPPMSNFPGAP*CHQLQS Trigger: TGATTGTAGCTGATGACAGCAAGGAGCCCCTGGAAA...ATTGGACATTGGAGGGTACCAAAAGCAGACTCCTAACAAGGGGAACAGGGAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS-3UTR CCA 90 bp | TGTTCCCTGTTCCCCTTGTTAGGAGTCTGCTTTTGGTACCCTCCAATGTCCAATAACCCTTGCAGGCTCTaGAAACTTTGGCTTGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: CSLFPLLGVCFWYPPMSNNPCRL*KLWLEG Trigger: ACCTTCAAGCCAAAGTTTCCAGAGCCTGCAAGGGTT...ATTGGACATTGGAGGGTACCAAAAGCAGACTCCTAACAAGGGGAACAGGGAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS-3UTR CCA 90 bp | CCCTTGTTAGGAGTCTGCTTTTGGTACCCTCCAATGTCCAATCCTACTATTTTTGGACCTTCCGATGTCTaGTGGAAATGGTCAGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PLLGVCFWYPPMSNPTIFGPSDV*WKWSAA Trigger: GGCAGCTGACCATTTCCACCAGACATCGGAAGGTCC...AAAAATAGTAGGATTGGACATTGGAGGGTACCAAAAGCAGACTCCTAACAAGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS-3UTR CCA 90 bp | TGTTCCCTGTTCCCCTTGTTAGGAGTCTGCTTTTGGTACCCTCCAATGTCCAATGGAGAAAAGTCTTCGTaGCAATGGTCACCAGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: CSLFPLLGVCFWYPPMSNGEKSS*QWSPGF Trigger: GAAACCTGGTGACCATTGCCACGAAGACTTTTCTCC...ATTGGACATTGGAGGGTACCAAAAGCAGACTCCTAACAAGGGGAACAGGGAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS-3UTR TCA 90 bp | CCCCTTGTTAGGAGTCTGCTTTTGGTACCCTCCAATGTCCAATCCTACTATTTTAGCCCTTCTCTCCTCTaGAAGTGCTCAAATTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PLVRSLLLVPSNVQSYYFSPSLL*KCSNSA Trigger: GGCAGAATTTGAGCACTTTCAGAGGAGAGAAGGGCT...AAAATAGTAGGATTGGACATTGGAGGGTACCAAAAGCAGACTCCTAACAAGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS-3UTR TCA 90 bp | TGTTCCCTGTTCCCCTTGTTAGGAGTCTGCTTTTGGTACCCTCCAATGTCCAATAGTAGAGATGGTTCTTaGAGTACTGGAGTGCAACCT | + |
|
Preference number: 4 (lower is better) Translates to: CSLFPLLGVCFWYPPMSNSRDGS*STGVQP Trigger: AGGTTGCACTCCAGTACTTCAAGAACCATCTCTACT...ATTGGACATTGGAGGGTACCAAAAGCAGACTCCTAACAAGGGGAACAGGGAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS-3UTR CCA 90 bp | TGTTCCCTGTTCCCCTTGTTAGGAGTCTGCTTTTGGTACCCTCCAATGTCCAATAGTCACACTGATTTTTaGGGAAGAGCCAGATGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: CSLFPLLGVCFWYPPMSNSHTDF*GRARCH Trigger: GTGACATCTGGCTCTTCCCCAAAAATCAGTGTGACT...ATTGGACATTGGAGGGTACCAAAAGCAGACTCCTAACAAGGGGAACAGGGAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS-3UTR CCA 90 bp | CCCTTGTTAGGAGTCTGCTTTTGGTACCCTCCAATGTCCAATCCTACTATTTTTCCTTCCGATGTCTGGTaGAAATGGTCAGCTGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PLLGVCFWYPPMSNPTIFPSDVW*KWSAAS Trigger: AGAGGCAGCTGACCATTTCCACCAGACATCGGAAGG...AAAAATAGTAGGATTGGACATTGGAGGGTACCAAAAGCAGACTCCTAACAAGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS-3UTR CCA 90 bp | CCCCTTGTTAGGAGTCTGCTTTTGGTACCCTCCAATGTCCAATCCTACTATTTTCCTTCCCAAAGGGCATaGTGTAGTACTCCACGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: PLVRSLLLVPSNVQSYYFPSQRA*CSTPRS Trigger: ACTACGTGGAGTACTACACCATGCCCTTTGGGAAGG...AAAATAGTAGGATTGGACATTGGAGGGTACCAAAAGCAGACTCCTAACAAGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS-3UTR CCA 90 bp | CCCCTTGTTAGGAGTCTGCTTTTGGTACCCTCCAATGTCCAATCCTACTATTTTCAAGGCAGCCAGCTTTaGATCCTTTGGTGGTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PLVRSLLLVPSNVQSYYFQGSQL*ILWWCS Trigger: AGAACACCACCAAAGGATCCAAAGCTGGCTGCCTTG...AAAATAGTAGGATTGGACATTGGAGGGTACCAAAAGCAGACTCCTAACAAGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS-3UTR TCA 90 bp | CCCCTTGTTAGGAGTCTGCTTTTGGTACCCTCCAATGTCCAATCCTACTATTTTGAGAAGCTTTCAGGATaGCCTCATAGACTGGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PLVRSLLLVPSNVQSYYFEKLSG*PHRLEH Trigger: ATGCTCCAGTCTATGAGGTCATCCTGAAAGCTTCTC...AAAATAGTAGGATTGGACATTGGAGGGTACCAAAAGCAGACTCCTAACAAGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS-3UTR GCA 90 bp | TGTTCCCTGTTCCCCTTGTTAGGAGTCTGCTTTTGGTACCCTCCAATGTCCAATAAAGTGCTCAAATTCTaGCTGTCTTCTGGCATTCAC | + |
|
Preference number: 4 (lower is better) Translates to: CSLFPLLGVCFWYPPMSNKVLKF*LSSGIH Trigger: GTGAATGCCAGAAGACAGGCAGAATTTGAGCACTTT...ATTGGACATTGGAGGGTACCAAAAGCAGACTCCTAACAAGGGGAACAGGGAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS-3UTR CCA 90 bp | CCCTTGTTAGGAGTCTGCTTTTGGTACCCTCCAATGTCCAATCCTACTATTTTTTCTGGCCCTTCATACTaGAGGCCTGGGATGAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: PLLGVCFWYPPMSNPTIFSGPSY*RPGMRI Trigger: AATTCTCATCCCAGGCCTCCAGTATGAAGGGCCAGA...AAAAATAGTAGGATTGGACATTGGAGGGTACCAAAAGCAGACTCCTAACAAGGG 46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS-3UTR CCA 90 bp | CCCCTTGTTAGGAGTCTGCTTTTGGTACCCTCCAATGTCCAATCCTACTATTTTGATGACCTCATAGACTaGAGCATCTGGCCCTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: PLVRSLLLVPSNVQSYYFDDLID*SIWPFI Trigger: TATGAAGGGCCAGATGCTCCAGTCTATGAGGTCATC...AAAATAGTAGGATTGGACATTGGAGGGTACCAAAAGCAGACTCCTAACAAGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS-3UTR CCA 90 bp | TGTTCCCTGTTCCCCTTGTTAGGAGTCTGCTTTTGGTACCCTCCAATGTCCAATTGGTTCTTGAAGTACTaGAGTGCAACCTTGAATTGG | + |
|
Preference number: 4 (lower is better) Translates to: CSLFPLLGVCFWYPPMSNWFLKY*SATLNW Trigger: CCAATTCAAGGTTGCACTCCAGTACTTCAAGAACCA...ATTGGACATTGGAGGGTACCAAAAGCAGACTCCTAACAAGGGGAACAGGGAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS-3UTR GCA 90 bp | TGTTCCCTGTTCCCCTTGTTAGGAGTCTGCTTTTGGTACCCTCCAATGTCCAATATTTCATTCGCAGTTTaGCAGAGTTACAGTCACACT | + |
|
Preference number: 4 (lower is better) Translates to: CSLFPLLGVCFWYPPMSNISFAV*QSYSHT Trigger: AGTGTGACTGTAACTCTGGCAAACTGCGAATGAAAT...ATTGGACATTGGAGGGTACCAAAAGCAGACTCCTAACAAGGGGAACAGGGAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS-3UTR CCA 90 bp | CCCTTGTTAGGAGTCTGCTTTTGGTACCCTCCAATGTCCAATCCTACTATTTTTTGTCTTGAGGAGCCATaGAAACCTGAAGCTGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: PLLGVCFWYPPMSNPTIFCLEEP*KPEAGK Trigger: TTTGCCAGCTTCAGGTTTCCATGGCTCCTCAAGACA...AAAAATAGTAGGATTGGACATTGGAGGGTACCAAAAGCAGACTCCTAACAAGGG 44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS-3UTR CCA 90 bp | CCCTTGTTAGGAGTCTGCTTTTGGTACCCTCCAATGTCCAATCCTACTATTTTTATTCTGCCTGTCTTCTaGCATTCACAGCTGGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PLLGVCFWYPPMSNPTIFILPVF*HSQLEG Trigger: ACCTTCCAGCTGTGAATGCCAGAAGACAGGCAGAAT...AAAAATAGTAGGATTGGACATTGGAGGGTACCAAAAGCAGACTCCTAACAAGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS-3UTR CCA 90 bp | CCCCTTGTTAGGAGTCTGCTTTTGGTACCCTCCAATGTCCAATCCTACTATTTTCCACTCGTTGCAAGATaGGATCAAAACCAACTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PLVRSLLLVPSNVQSYYFPLVAR*DQNQLF Trigger: GAAGAGTTGGTTTTGATCCCATCTTGCAACGAGTGG...AAAATAGTAGGATTGGACATTGGAGGGTACCAAAAGCAGACTCCTAACAAGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS-3UTR CCA 90 bp | TGTTCCCTGTTCCCCTTGTTAGGAGTCTGCTTTTGGTACCCTCCAATGTCCAATAGTGCAACCTTGAATTaGATCACAGAATTGGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: CSLFPLLGVCFWYPPMSNSATLN*ITELVL Trigger: CAACACCAATTCTGTGATCCAATTCAAGGTTGCACT...ATTGGACATTGGAGGGTACCAAAAGCAGACTCCTAACAAGGGGAACAGGGAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS-3UTR CCA 90 bp | CCCCTTGTTAGGAGTCTGCTTTTGGTACCCTCCAATGTCCAATCCTACTATTTTGGTGTTCTTACTTGGTaGTTTATAATTACACCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: PLVRSLLLVPSNVQSYYFGVLTW*FIITPG Trigger: CCCGGGTGTAATTATAAACCACCAAGTAAGAACACC...AAAATAGTAGGATTGGACATTGGAGGGTACCAAAAGCAGACTCCTAACAAGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS-3UTR CCA 90 bp | CCCTTGTTAGGAGTCTGCTTTTGGTACCCTCCAATGTCCAATCCTACTATTTTTCAGCTTTGGATCCTTTaGTGGTGTTCTTACTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PLLGVCFWYPPMSNPTIFQLWIL*WCSYLV Trigger: CACCAAGTAAGAACACCACCAAAGGATCCAAAGCTG...AAAAATAGTAGGATTGGACATTGGAGGGTACCAAAAGCAGACTCCTAACAAGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS-3UTR CCA 90 bp | CCCCTTGTTAGGAGTCTGCTTTTGGTACCCTCCAATGTCCAATCCTACTATTTTGGTGGTGTTCTTACTTaGTGGTTTATAATTACACCC | + |
|
Preference number: 4 (lower is better) Translates to: PLVRSLLLVPSNVQSYYFGGVLT*WFIITP Trigger: GGGTGTAATTATAAACCACCAAGTAAGAACACCACC...AAAATAGTAGGATTGGACATTGGAGGGTACCAAAAGCAGACTCCTAACAAGGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS-3UTR CCA 90 bp | CCCTTGTTAGGAGTCTGCTTTTGGTACCCTCCAATGTCCAATCCTACTATTTTTATTGGATCACAGAATTaGTGTTGGCCCGGTATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PLLGVCFWYPPMSNPTIFIGSQN*CWPGIC Trigger: ACAAATACCGGGCCAACACCAATTCTGTGATCCAAT...AAAAATAGTAGGATTGGACATTGGAGGGTACCAAAAGCAGACTCCTAACAAGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS CCA 90 bp | GGGGCATCACCTCCACACCATGGACTGGGTATCCGAAGGGGAGATTaGGTGGAGCCAGCAGAGGTGGTGGGCGAGGCAGCCCTTCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GASPPHHGLGIRRGD*VEPAEVVGEAALLS Trigger: GGAGAGAAGGGCTGCCTCGCCCACCACCTCTGCTGGCTCCACCCAATCTCCCCTTCGGATACCCAGTCCATGGTGTGGAGGTGATGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS CCA 90 bp | GACTGGGTATCCGAAGGGGAGATTGGGTGGAGCCAGCAGAGGTGGTaGGCGAGGCAGCCCTTCTCTCCTCTGAAAGTGCTCAAATTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: DWVSEGEIGWSQQRW*ARQPFSPLKVLKFC Trigger: GCAGAATTTGAGCACTTTCAGAGGAGAGAAGGGCTGCCTCGCCCACCACCTCTGCTGGCTCCACCCAATCTCCCCTTCGGATACCCAGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS TCA 90 bp | GGTGGAGCCAGCAGAGGTGGTGGGCGAGGCAGCCCTTCTCTCCTCTaGAAGTGCTCAAATTCTGCCTGTCTTCTGGCATTCACAGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: GGASRGGGRGSPSLL*KCSNSACLLAFTAG Trigger: TCCAGCTGTGAATGCCAGAAGACAGGCAGAATTTGAGCACTTTCAGAGGAGAGAAGGGCTGCCTCGCCCACCACCTCTGCTGGCTCCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS CCA 90 bp | TGGGATGAGAATTGTATGCAGGGGCATCACCTCCACACCATGGACTaGGTATCCGAAGGGGAGATTGGGTGGAGCCAGCAGAGGTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: WDENCMQGHHLHTMD*VSEGEIGWSQQRWW Trigger: CCACCACCTCTGCTGGCTCCACCCAATCTCCCCTTCGGATACCCAGTCCATGGTGTGGAGGTGATGCCCCTGCATACAATTCTCATCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS CCA 90 bp | AGGCCTGGGATGAGAATTGTATGCAGGGGCATCACCTCCACACCATaGACTGGGTATCCGAAGGGGAGATTGGGTGGAGCCAGCAGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: RPGMRIVCRGITSTP*TGYPKGRLGGASRG Trigger: ACCTCTGCTGGCTCCACCCAATCTCCCCTTCGGATACCCAGTCCATGGTGTGGAGGTGATGCCCCTGCATACAATTCTCATCCCAGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS TCA 90 bp | TTCCGATGTCTGGTGGAAATGGTCAGCTGCCTCTGGCCTCTGCCCTaGACCTCATCATCTGGCACATCAGCAAGGGTGTTCAGTGTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: FRCLVEMVSCLWPLP*TSSSGTSARVFSVP Trigger: GGGGACACTGAACACCCTTGCTGATGTGCCAGATGATGAGGTTCAGGGCAGAGGCCAGAGGCAGCTGACCATTTCCACCAGACATCGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS GCA 90 bp | GGACCTTCCGATGTCTGGTGGAAATGGTCAGCTGCCTCTGGCCTCTaGCCTGAACCTCATCATCTGGCACATCAGCAAGGGTGTTCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: GPSDVWWKWSAASGL*PEPHHLAHQQGCSV Trigger: CACTGAACACCCTTGCTGATGTGCCAGATGATGAGGTTCAGGGCAGAGGCCAGAGGCAGCTGACCATTTCCACCAGACATCGGAAGGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS TCA 90 bp | CATCCGGGAAAGCCGTCAAGGGCCTGGAATGATCCCCACCTCTGGTaGAGACAGCTCCCATTCTTGGTCTGTTCATACAGCAGCCTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: HPGKPSRAWNDPHLW*RQLPFLVCSYSSLN Trigger: GTTCAGGCTGCTGTATGAACAGACCAAGAATGGGAGCTGTCTTCACCAGAGGTGGGGATCATTCCAGGCCCTTGACGGCTTTCCCGGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS TCA 90 bp | TCTGGTGAAGACAGCTCCCATTCTTGGTCTGTTCATACAGCAGCCTaGACTGGTAAGTATTCCCCTGCACGCTGCCACCCACCACATCCA | + |
|
Preference number: 5 (lower is better) Translates to: SGEDSSHSWSVHTAA*TGKYSPARCHPPHP Trigger: TGGATGTGGTGGGTGGCAGCGTGCAGGGGAATACTTACCAGTTCAGGCTGCTGTATGAACAGACCAAGAATGGGAGCTGTCTTCACCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS CCA 90 bp | GAGCCCACCAACAGTCTCCCCAGCCCATCAATAAAGAACTCTCCGTaGGCCACTCGTTGCAAGATGGGATCAAAACCAACTCTTCGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: EPTNSLPSPSIKNSP*ATRCKMGSKPTLRS Trigger: ACTCCGAAGAGTTGGTTTTGATCCCATCTTGCAACGAGTGGCCCACGGAGAGTTCTTTATTGATGGGCTGGGGAGACTGTTGGTGGGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS GCA 90 bp | TGGTGGGCGAGGCAGCCCTTCTCTCCTCTGAAAGTGCTCAAATTCTaGCTGTCTTCTGGCATTCACAGCTGGAAGGTCCTTCTGGTTATA | + |
|
Preference number: 5 (lower is better) Translates to: WWARQPFSPLKVLKF*LSSGIHSWKVLLVI Trigger: TATAACCAGAAGGACCTTCCAGCTGTGAATGCCAGAAGACAGGCAGAATTTGAGCACTTTCAGAGGAGAGAAGGGCTGCCTCGCCCACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS CCA 90 bp | TCCAAGGCAGCCAGCTTTGGATCCTTTGGTGGTGTTCTTACTTGGTaGTTTATAATTACACCCGGGCAAGAGCCCACCAACAGTCTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: SKAASFGSFGGVLTW*FIITPGQEPTNSLP Trigger: GGGGAGACTGTTGGTGGGCTCTTGCCCGGGTGTAATTATAAACCACCAAGTAAGAACACCACCAAAGGATCCAAAGCTGGCTGCCTTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS TCA 90 bp | TGTGGGGACGGAGAAAAGTCTTCGTGGCAATGGTCACCAGGTTTCTaGTCTTCCTCTCAGGTCCAGGGTCATACAACTTGGGTACAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: CGDGEKSSWQWSPGF*SSSQVQGHTTWVQS Trigger: AGACTGTACCCAAGTTGTATGACCCTGGACCTGAGAGGAAGATCAGAAACCTGGTGACCATTGCCACGAAGACTTTTCTCCGTCCCCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS-3UTR CAA 90 bp | TGTTCCCTGTTCCCCTTGTTAGGAGTCTGCTTTTGGTACCCTCCAATGTCCAATTCCGTGGGCCACTCGTaGCAAGATGGGATCAAAACC | + |
|
Preference number: 5 (lower is better) Translates to: CSLFPLLGVCFWYPPMSNSVGHS*QDGIKT Trigger: GGTTTTGATCCCATCTTGCAACGAGTGGCCCACGGA...ATTGGACATTGGAGGGTACCAAAAGCAGACTCCTAACAAGGGGAACAGGGAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS CCA 90 bp | TTCTCCAAGGCAGCCAGCTTTGGATCCTTTGGTGGTGTTCTTACTTaGTGGTTTATAATTACACCCGGGCAAGAGCCCACCAACAGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: FSKAASFGSFGGVLT*WFIITPGQEPTNSL Trigger: GAGACTGTTGGTGGGCTCTTGCCCGGGTGTAATTATAAACCACCAAGTAAGAACACCACCAAAGGATCCAAAGCTGGCTGCCTTGGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS-3UTR CAA 90 bp | CCCCTTGTTAGGAGTCTGCTTTTGGTACCCTCCAATGTCCAATCCTACTATTTTTATCCGAAGGGGAGATaGGGTGGAGCCAGCAGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: PLVRSLLLVPSNVQSYYFYPKGR*GGASRG Trigger: ACCTCTGCTGGCTCCACCCAATCTCCCCTTCGGATA...AAAATAGTAGGATTGGACATTGGAGGGTACCAAAAGCAGACTCCTAACAAGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS-3UTR CAA 90 bp | CCCTTGTTAGGAGTCTGCTTTTGGTACCCTCCAATGTCCAATCCTACTATTTTTCCAAGGCAGCCAGCTTaGGATCCTTTGGTGGTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: PLLGVCFWYPPMSNPTIFPRQPA*DPLVVF Trigger: GAACACCACCAAAGGATCCAAAGCTGGCTGCCTTGG...AAAAATAGTAGGATTGGACATTGGAGGGTACCAAAAGCAGACTCCTAACAAGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS CCA 90 bp | TTTGTCATAAGTCTTCTCCAAGGCAGCCAGCTTTGGATCCTTTGGTaGTGTTCTTACTTGGTGGTTTATAATTACACCCGGGCAAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: FVISLLQGSQLWILW*CSYLVVYNYTRARA Trigger: GGCTCTTGCCCGGGTGTAATTATAAACCACCAAGTAAGAACACCACCAAAGGATCCAAAGCTGGCTGCCTTGGAGAAGACTTATGACAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS-3UTR CAA 90 bp | TGTTCCCTGTTCCCCTTGTTAGGAGTCTGCTTTTGGTACCCTCCAATGTCCAATACCTCAATCTTGGTCTaGTCGCTGAAGAGAAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: CSLFPLLGVCFWYPPMSNTSILV*SLKRKS Trigger: TGACTTTCTCTTCAGCGACAAGACCAAGATTGAGGT...ATTGGACATTGGAGGGTACCAAAAGCAGACTCCTAACAAGGGGAACAGGGAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS TCA 90 bp | CTTGGGTACAGTCTGTTGTTTGATAGTCACTGGAAACTTGGCCACTaGCGACTCGTATTCCATACTTACTGTGTCCACCTTGTGGAGATA | + |
|
Preference number: 5 (lower is better) Translates to: LGYSLLFDSHWKLGH*RLVFHTYCVHLVEI Trigger: TATCTCCACAAGGTGGACACAGTAAGTATGGAATACGAGTCGTCAGTGGCCAAGTTTCCAGTGACTATCAAACAACAGACTGTACCCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS CCA 90 bp | TTCCAGGGGCTCCTTGCTGTCATCAGCTACAATCACGGTGATGTCTaGGTAATATTTTCGAATACTCTGAAGCAGGATCTTAAGCTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: FQGLLAVISYNHGDV*VIFSNTLKQDLKLV Trigger: CACAAGCTTAAGATCCTGCTTCAGAGTATTCGAAAATATTACCCAGACATCACCGTGATTGTAGCTGATGACAGCAAGGAGCCCCTGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS CCA 90 bp | GTTGGCCCGGTATTTGTCATAAGTCTTCTCCAAGGCAGCCAGCTTTaGATCCTTTGGTGGTGTTCTTACTTGGTGGTTTATAATTACACC | + |
|
Preference number: 5 (lower is better) Translates to: VGPVFVISLLQGSQL*ILWWCSYLVVYNYT Trigger: GGTGTAATTATAAACCACCAAGTAAGAACACCACCAAAGGATCCAAAGCTGGCTGCCTTGGAGAAGACTTATGACAAATACCGGGCCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS-3UTR CAA 90 bp | CCCCTTGTTAGGAGTCTGCTTTTGGTACCCTCCAATGTCCAATCCTACTATTTTATGAGGACAAATGTCTaGAGGAGCCATGGAAACCTG | + |
|
Preference number: 5 (lower is better) Translates to: PLVRSLLLVPSNVQSYYFMRTNV*RSHGNL Trigger: CAGGTTTCCATGGCTCCTCAAGACATTTGTCCTCAT...AAAATAGTAGGATTGGACATTGGAGGGTACCAAAAGCAGACTCCTAACAAGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS-3UTR CAA 90 bp | CCCTTGTTAGGAGTCTGCTTTTGGTACCCTCCAATGTCCAATCCTACTATTTTTATTTCCAGGGGCTCCTaGCTGTCATCAGCTACAATC | + |
|
Preference number: 5 (lower is better) Translates to: PLLGVCFWYPPMSNPTIFISRGS*LSSATI Trigger: GATTGTAGCTGATGACAGCAAGGAGCCCCTGGAAAT...AAAAATAGTAGGATTGGACATTGGAGGGTACCAAAAGCAGACTCCTAACAAGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS CCA 90 bp | GTATTTGTCATAAGTCTTCTCCAAGGCAGCCAGCTTTGGATCCTTTaGTGGTGTTCTTACTTGGTGGTTTATAATTACACCCGGGCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: VFVISLLQGSQLWIL*WCSYLVVYNYTRAR Trigger: TCTTGCCCGGGTGTAATTATAAACCACCAAGTAAGAACACCACCAAAGGATCCAAAGCTGGCTGCCTTGGAGAAGACTTATGACAAATAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS-3UTR CAA 90 bp | CCCCTTGTTAGGAGTCTGCTTTTGGTACCCTCCAATGTCCAATCCTACTATTTTTCTGGAAACTTTGGCTaGAAGGTGCTGAAGTCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: PLVRSLLLVPSNVQSYYFSGNFG*KVLKSV Trigger: AACAGACTTCAGCACCTTCAAGCCAAAGTTTCCAGA...AAAATAGTAGGATTGGACATTGGAGGGTACCAAAAGCAGACTCCTAACAAGGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS-3UTR CAA 90 bp | CCCTTGTTAGGAGTCTGCTTTTGGTACCCTCCAATGTCCAATCCTACTATTTTTATAGTCACTGGAAACTaGGCCACTGACGACTCGTAT | + |
|
Preference number: 5 (lower is better) Translates to: PLLGVCFWYPPMSNPTIFIVTGN*ATDDSY Trigger: ATACGAGTCGTCAGTGGCCAAGTTTCCAGTGACTAT...AAAAATAGTAGGATTGGACATTGGAGGGTACCAAAAGCAGACTCCTAACAAGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS-3UTR CAA 90 bp | TGTTCCCTGTTCCCCTTGTTAGGAGTCTGCTTTTGGTACCCTCCAATGTCCAATTGGTGGTGTTCTTACTaGGTGGTTTATAATTACACC | + |
|
Preference number: 5 (lower is better) Translates to: CSLFPLLGVCFWYPPMSNWWCSY*VVYNYT Trigger: GGTGTAATTATAAACCACCAAGTAAGAACACCACCA...ATTGGACATTGGAGGGTACCAAAAGCAGACTCCTAACAAGGGGAACAGGGAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS CCA 90 bp | CCTCTGAAAGTGCTCAAATTCTGCCTGTCTTCTGGCATTCACAGCTaGAAGGTCCTTCTGGTTATAGGCATCCTGAAACTTATATTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: PLKVLKFCLSSGIHS*KVLLVIGILKLIFH Trigger: ATGAAATATAAGTTTCAGGATGCCTATAACCAGAAGGACCTTCCAGCTGTGAATGCCAGAAGACAGGCAGAATTTGAGCACTTTCAGAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS-3UTR CAA 90 bp | CCCCTTGTTAGGAGTCTGCTTTTGGTACCCTCCAATGTCCAATCCTACTATTTTTACTGGAGTGCAACCTaGAATTGGATCACAGAATTG | + |
|
Preference number: 5 (lower is better) Translates to: PLVRSLLLVPSNVQSYYFYWSAT*NWITEL Trigger: CAATTCTGTGATCCAATTCAAGGTTGCACTCCAGTA...AAAATAGTAGGATTGGACATTGGAGGGTACCAAAAGCAGACTCCTAACAAGGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS GCA 90 bp | CCTTCTGGTTATAGGCATCCTGAAACTTATATTTCATTCGCAGTTTaGCAGAGTTACAGTCACACTGATTTTTGGGGAAGAGCCAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: PSGYRHPETYISFAV*QSYSHTDFWGRARC Trigger: ACATCTGGCTCTTCCCCAAAAATCAGTGTGACTGTAACTCTGGCAAACTGCGAATGAAATATAAGTTTCAGGATGCCTATAACCAGAAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS-3UTR CAA 90 bp | CCCTTGTTAGGAGTCTGCTTTTGGTACCCTCCAATGTCCAATCCTACTATTTTTCTTGGGTACAGTCTGTaGTTTGATAGTCACTGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: PLLGVCFWYPPMSNPTIFLGYSL*FDSHWK Trigger: TTTCCAGTGACTATCAAACAACAGACTGTACCCAAG...AAAAATAGTAGGATTGGACATTGGAGGGTACCAAAAGCAGACTCCTAACAAGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS CAA 72 bp | ACCTCCACACCATGGACTGGGTATCCGAAGGGGAGATaGGGTGGAGCCAGCAGAGGTGGTGGGCGAGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: TSTPWTGYPKGR*GGASRGGGRGS Trigger: GCTGCCTCGCCCACCACCTCTGCTGGCTCCACCCAATCTCCCCTTCGGATACCCAGTCCATGGTGTGGAGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS CAA 90 bp | AGGGGCATCACCTCCACACCATGGACTGGGTATCCGAAGGGGAGATaGGGTGGAGCCAGCAGAGGTGGTGGGCGAGGCAGCCCTTCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: RGITSTPWTGYPKGR*GGASRGGGRGSPSL Trigger: GAGAGAAGGGCTGCCTCGCCCACCACCTCTGCTGGCTCCACCCAATCTCCCCTTCGGATACCCAGTCCATGGTGTGGAGGTGATGCCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS CCA 72 bp | TCCGAAGGGGAGATTGGGTGGAGCCAGCAGAGGTGGTaGGCGAGGCAGCCCTTCTCTCCTCTGAAAGTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SEGEIGWSQQRW*ARQPFSPLKVL Trigger: GAGCACTTTCAGAGGAGAGAAGGGCTGCCTCGCCCACCACCTCTGCTGGCTCCACCCAATCTCCCCTTCGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS GCA 72 bp | GAGCCAAGAAGAAGTTCACCACGCCGCTGGTCAACGTaGATCCGGGAAAGCCGTCAAGGGCCTGGAATGATC | + |
|
Preference number: 6 (lower is better) Translates to: EPRRSSPRRWST*IRESRQGPGMI Trigger: GATCATTCCAGGCCCTTGACGGCTTTCCCGGATGCACGTTGACCAGCGGCGTGGTGAACTTCTTCTTGGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS TCA 72 bp | CTGGTGGAAATGGTCAGCTGCCTCTGGCCTCTGCCCTaGACCTCATCATCTGGCACATCAGCAAGGGTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: LVEMVSCLWPLP*TSSSGTSARVF Trigger: GAACACCCTTGCTGATGTGCCAGATGATGAGGTTCAGGGCAGAGGCCAGAGGCAGCTGACCATTTCCACCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS CCA 72 bp | AATTGTATGCAGGGGCATCACCTCCACACCATGGACTaGGTATCCGAAGGGGAGATTGGGTGGAGCCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: NCMQGHHLHTMD*VSEGEIGWSQQ Trigger: CTGCTGGCTCCACCCAATCTCCCCTTCGGATACCCAGTCCATGGTGTGGAGGTGATGCCCCTGCATACAATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS TCA 72 bp | AGCAGAGGTGGTGGGCGAGGCAGCCCTTCTCTCCTCTaGAAGTGCTCAAATTCTGCCTGTCTTCTGGCATTC | + |
|
Preference number: 6 (lower is better) Translates to: SRGGGRGSPSLL*KCSNSACLLAF Trigger: GAATGCCAGAAGACAGGCAGAATTTGAGCACTTTCAGAGGAGAGAAGGGCTGCCTCGCCCACCACCTCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS GCA 72 bp | GGCCCTTCATACTGGAGGCCTGGGATGAGAATTGTATaGAGGGGCATCACCTCCACACCATGGACTGGGTAT | + |
|
Preference number: 6 (lower is better) Translates to: GPSYWRPGMRIV*RGITSTPWTGY Trigger: ATACCCAGTCCATGGTGTGGAGGTGATGCCCCTGCATACAATTCTCATCCCAGGCCTCCAGTATGAAGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS CCA 72 bp | ATGAGAATTGTATGCAGGGGCATCACCTCCACACCATaGACTGGGTATCCGAAGGGGAGATTGGGTGGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: MRIVCRGITSTP*TGYPKGRLGGA Trigger: GGCTCCACCCAATCTCCCCTTCGGATACCCAGTCCATGGTGTGGAGGTGATGCCCCTGCATACAATTCTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS TCA 72 bp | GACAGCTCCCATTCTTGGTCTGTTCATACAGCAGCCTaGACTGGTAAGTATTCCCCTGCACGCTGCCACCCA | + |
|
Preference number: 6 (lower is better) Translates to: DSSHSWSVHTAA*TGKYSPARCHP Trigger: TGGGTGGCAGCGTGCAGGGGAATACTTACCAGTTCAGGCTGCTGTATGAACAGACCAAGAATGGGAGCTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS CAA 90 bp | GTGGGCCACTCGTTGCAAGATGGGATCAAAACCAACTCTTCGGAGTaGTTCCGTGTGAGCCAAGAAGAAGTTCACCACGCCGCTGGTCAA | + |
|
Preference number: 6 (lower is better) Translates to: VGHSLQDGIKTNSSE*FRVSQEEVHHAAGQ Trigger: TTGACCAGCGGCGTGGTGAACTTCTTCTTGGCTCACACGGAACAACTCCGAAGAGTTGGTTTTGATCCCATCTTGCAACGAGTGGCCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS TCA 72 bp | CAAGGGTGTTCAGTGTCCCCAGAGAAGCTTTCAGGATaGCCTCATAGACTGGAGCATCTGGCCCTTCATACT | + |
|
Preference number: 6 (lower is better) Translates to: QGCSVSPEKLSG*PHRLEHLALHT Trigger: AGTATGAAGGGCCAGATGCTCCAGTCTATGAGGTCATCCTGAAAGCTTCTCTGGGGACACTGAACACCCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS CCA 72 bp | GCAGCCAGCTTTGGATCCTTTGGTGGTGTTCTTACTTaGTGGTTTATAATTACACCCGGGCAAGAGCCCACC | + |
|
Preference number: 6 (lower is better) Translates to: AASFGSFGGVLT*WFIITPGQEPT Trigger: GGTGGGCTCTTGCCCGGGTGTAATTATAAACCACCAAGTAAGAACACCACCAAAGGATCCAAAGCTGGCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS CAA 72 bp | GGCAGCCAGCTTTGGATCCTTTGGTGGTGTTCTTACTaGGTGGTTTATAATTACACCCGGGCAAGAGCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: GSQLWILWWCSY*VVYNYTRARAH Trigger: GTGGGCTCTTGCCCGGGTGTAATTATAAACCACCAAGTAAGAACACCACCAAAGGATCCAAAGCTGGCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS CAA 90 bp | AGCTTCAGCACTGGGTCAACCCTTGCAGGCTCTGGAAACTTTGGCTaGAAGGTGCTGAAGTCTGTTGTAAGGGACACCTTTCTCACCATA | + |
|
Preference number: 6 (lower is better) Translates to: SFSTGSTLAGSGNFG*KVLKSVVRDTFLTI Trigger: TATGGTGAGAAAGGTGTCCCTTACAACAGACTTCAGCACCTTCAAGCCAAAGTTTCCAGAGCCTGCAAGGGTTGACCCAGTGCTGAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS CAA 90 bp | CTTCTCCAAGGCAGCCAGCTTTGGATCCTTTGGTGGTGTTCTTACTaGGTGGTTTATAATTACACCCGGGCAAGAGCCCACCAACAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: LLQGSQLWILWWCSY*VVYNYTRARAHQQS Trigger: AGACTGTTGGTGGGCTCTTGCCCGGGTGTAATTATAAACCACCAAGTAAGAACACCACCAAAGGATCCAAAGCTGGCTGCCTTGGAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS TCA 72 bp | GGAGAAAAGTCTTCGTGGCAATGGTCACCAGGTTTCTaGTCTTCCTCTCAGGTCCAGGGTCATACAACTTGG | + |
|
Preference number: 6 (lower is better) Translates to: GEKSSWQWSPGF*SSSQVQGHTTW Trigger: CCAAGTTGTATGACCCTGGACCTGAGAGGAAGATCAGAAACCTGGTGACCATTGCCACGAAGACTTTTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS CCA 72 bp | AACAGTCTCCCCAGCCCATCAATAAAGAACTCTCCGTaGGCCACTCGTTGCAAGATGGGATCAAAACCAACT | + |
|
Preference number: 6 (lower is better) Translates to: NSLPSPSIKNSP*ATRCKMGSKPT Trigger: AGTTGGTTTTGATCCCATCTTGCAACGAGTGGCCCACGGAGAGTTCTTTATTGATGGGCTGGGGAGACTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS CAA 72 bp | GCAACAGTGGCAAGTCCTACCATGAGGACAAATGTCTaGAGGAGCCATGGAAACCTGAAGCTGGCAAAAGAC | + |
|
Preference number: 6 (lower is better) Translates to: ATVASPTMRTNV*RSHGNLKLAKD Trigger: GTCTTTTGCCAGCTTCAGGTTTCCATGGCTCCTCAAGACATTTGTCCTCATGGTAGGACTTGCCACTGTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS CAA 90 bp | ACCATAAACGCAACAGTGGCAAGTCCTACCATGAGGACAAATGTCTaGAGGAGCCATGGAAACCTGAAGCTGGCAAAAGACACGCTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: TINATVASPTMRTNV*RSHGNLKLAKDTLE Trigger: TTCCAGCGTGTCTTTTGCCAGCTTCAGGTTTCCATGGCTCCTCAAGACATTTGTCCTCATGGTAGGACTTGCCACTGTTGCGTTTATGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS TCA 72 bp | GGACATCCACCAGTACCTCAATCTTGGTCTTGTCGCTaGAGAGAAAGTCATCGTCCACCCAGAGGACATATT | + |
|
Preference number: 6 (lower is better) Translates to: GHPPVPQSWSCR*RESHRPPRGHI Trigger: AATATGTCCTCTGGGTGGACGATGACTTTCTCTTCAGCGACAAGACCAAGATTGAGGTACTGGTGGATGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS GCA 72 bp | AGCCCATCAATAAAGAACTCTCCGTGGGCCACTCGTTaGAAGATGGGATCAAAACCAACTCTTCGGAGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: SPSIKNSPWATR*KMGSKPTLRSC Trigger: ACAACTCCGAAGAGTTGGTTTTGATCCCATCTTGCAACGAGTGGCCCACGGAGAGTTCTTTATTGATGGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS CAA 90 bp | TTCCTCTCAGGTCCAGGGTCATACAACTTGGGTACAGTCTGTTGTTaGATAGTCACTGGAAACTTGGCCACTGACGACTCGTATTCCATA | + |
|
Preference number: 6 (lower is better) Translates to: FLSGPGSYNLGTVCC*IVTGNLATDDSYSI Trigger: TATGGAATACGAGTCGTCAGTGGCCAAGTTTCCAGTGACTATCAAACAACAGACTGTACCCAAGTTGTATGACCCTGGACCTGAGAGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS TCA 72 bp | CCAGGGGCTCCTTGCTGTCATCAGCTACAATCACGGTaGTGTCTGGGTAATATTTTCGAATACTCTGAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: PGAPCCHQLQSR*CLGNIFEYSEA Trigger: TGCTTCAGAGTATTCGAAAATATTACCCAGACATCACCGTGATTGTAGCTGATGACAGCAAGGAGCCCCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS CCA 72 bp | AGTCTTCTCCAAGGCAGCCAGCTTTGGATCCTTTGGTaGTGTTCTTACTTGGTGGTTTATAATTACACCCGG | + |
|
Preference number: 6 (lower is better) Translates to: SLLQGSQLWILW*CSYLVVYNYTR Trigger: CCGGGTGTAATTATAAACCACCAAGTAAGAACACCACCAAAGGATCCAAAGCTGGCTGCCTTGGAGAAGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS CAA 72 bp | GAGATGGTTCTTGAAGTACTGGAGTGCAACCTTGAATaGGATCACAGAATTGGTGTTGGCCCGGTATTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: EMVLEVLECNLE*DHRIGVGPVFV Trigger: GACAAATACCGGGCCAACACCAATTCTGTGATCCAATTCAAGGTTGCACTCCAGTACTTCAAGAACCATCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS CAA 90 bp | TCATACAACTTGGGTACAGTCTGTTGTTTGATAGTCACTGGAAACTaGGCCACTGACGACTCGTATTCCATACTTACTGTGTCCACCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SYNLGTVCCLIVTGN*ATDDSYSILTVSTL Trigger: CAAGGTGGACACAGTAAGTATGGAATACGAGTCGTCAGTGGCCAAGTTTCCAGTGACTATCAAACAACAGACTGTACCCAAGTTGTATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS CAA 90 bp | GGAGCAGTAGAGATGGTTCTTGAAGTACTGGAGTGCAACCTTGAATaGGATCACAGAATTGGTGTTGGCCCGGTATTTGTCATAAGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: GAVEMVLEVLECNLE*DHRIGVGPVFVISL Trigger: AAGACTTATGACAAATACCGGGCCAACACCAATTCTGTGATCCAATTCAAGGTTGCACTCCAGTACTTCAAGAACCATCTCTACTGCTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS TCA 72 bp | AGTCTGTTGTTTGATAGTCACTGGAAACTTGGCCACTaGCGACTCGTATTCCATACTTACTGTGTCCACCTT | + |
|
Preference number: 6 (lower is better) Translates to: SLLFDSHWKLGH*RLVFHTYCVHL Trigger: AAGGTGGACACAGTAAGTATGGAATACGAGTCGTCAGTGGCCAAGTTTCCAGTGACTATCAAACAACAGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS CCA 72 bp | AGATGGTTCTTGAAGTACTGGAGTGCAACCTTGAATTaGATCACAGAATTGGTGTTGGCCCGGTATTTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: RWFLKYWSATLN*ITELVLARYLS Trigger: TGACAAATACCGGGCCAACACCAATTCTGTGATCCAATTCAAGGTTGCACTCCAGTACTTCAAGAACCATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS CAA 72 bp | TTGGGTACAGTCTGTTGTTTGATAGTCACTGGAAACTaGGCCACTGACGACTCGTATTCCATACTTACTGTG | + |
|
Preference number: 6 (lower is better) Translates to: LGTVCCLIVTGN*ATDDSYSILTV Trigger: CACAGTAAGTATGGAATACGAGTCGTCAGTGGCCAAGTTTCCAGTGACTATCAAACAACAGACTGTACCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS CAA 72 bp | GGTATTTGTCATAAGTCTTCTCCAAGGCAGCCAGCTTaGGATCCTTTGGTGGTGTTCTTACTTGGTGGTTTA | + |
|
Preference number: 6 (lower is better) Translates to: GICHKSSPRQPA*DPLVVFLLGGL Trigger: TAAACCACCAAGTAAGAACACCACCAAAGGATCCAAAGCTGGCTGCCTTGGAGAAGACTTATGACAAATACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS CCA 72 bp | ATAAGTCTTCTCCAAGGCAGCCAGCTTTGGATCCTTTaGTGGTGTTCTTACTTGGTGGTTTATAATTACACC | + |
|
Preference number: 6 (lower is better) Translates to: ISLLQGSQLWIL*WCSYLVVYNYT Trigger: GGTGTAATTATAAACCACCAAGTAAGAACACCACCAAAGGATCCAAAGCTGGCTGCCTTGGAGAAGACTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS CCA 72 bp | GTATTTGTCATAAGTCTTCTCCAAGGCAGCCAGCTTTaGATCCTTTGGTGGTGTTCTTACTTGGTGGTTTAT | + |
|
Preference number: 6 (lower is better) Translates to: VFVISLLQGSQL*ILWWCSYLVVY Trigger: ATAAACCACCAAGTAAGAACACCACCAAAGGATCCAAAGCTGGCTGCCTTGGAGAAGACTTATGACAAATAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||
| CDS GCA 72 bp | TATAGGCATCCTGAAACTTATATTTCATTCGCAGTTTaGCAGAGTTACAGTCACACTGATTTTTGGGGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: YRHPETYISFAV*QSYSHTDFWGR Trigger: TCTTCCCCAAAAATCAGTGTGACTGTAACTCTGGCAAACTGCGAATGAAATATAAGTTTCAGGATGCCTATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038343.7 |
||