Pregenerated sensors for B4GALNT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006731Ensembl transcript IDs: ENSMUST00000006914.11, ENSMUST00000217678.2
Found 152 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACACAACTTGGGAAGCCAACGAGCTCGTGGTGGAAGCCCTGCTTTTaGCGGAAGCAGTTCCCAAGGCCTGGGGCGCCCGGCTCCACACTC | + |
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Preference number: 1 (lower is better) Translates to: TQLGKPTSSWWKPCF*RKQFPRPGAPGSTL Trigger: GAGTGTGGAGCCGGGCGCCCCAGGCCTTGGGAACTGCTTCCGGCAAAAGCAGGGCTTCCACCACGAGCTCGTTGGCTTCCCAAGTTGTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217678.2 |
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| 3UTR GCA 90 bp | GGCTTTCACCGTGTGTTCACCAGCCCCACAGAACTACAGTCACAGTaGTTTCTGTGGGGGTATGTGGGAGCCGGTACACACGGTGCTGGA | + |
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Preference number: 1 (lower is better) Translates to: GFHRVFTSPTELQSQ*FLWGYVGAGTHGAG Trigger: TCCAGCACCGTGTGTACCGGCTCCCACATACCCCCACAGAAAGCACTGTGACTGTAGTTCTGTGGGGCTGGTGAACACACGGTGAAAGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
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| 3UTR CCA 90 bp | CGTGTGTTCACCAGCCCCACAGAACTACAGTCACAGTGCTTTCTGTaGGGGTATGTGGGAGCCGGTACACACGGTGCTGGATCCAGAGCT | + |
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Preference number: 1 (lower is better) Translates to: RVFTSPTELQSQCFL*GYVGAGTHGAGSRA Trigger: AGCTCTGGATCCAGCACCGTGTGTACCGGCTCCCACATACCCCCACAGAAAGCACTGTGACTGTAGTTCTGTGGGGCTGGTGAACACACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
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| 3UTR CCA 90 bp | TGCGAACCAACCCTTGCCGAAGGGCATGAAGTAGTGCTCCACGTGTaGGTCGCTAATGCGCTCCGGTTTGTCACTGTCGTCAGCGATGAC | + |
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Preference number: 1 (lower is better) Translates to: CEPTLAEGHEVVLHV*VANALRFVTVVSDD Trigger: GTCATCGCTGACGACAGTGACAAACCGGAGCGCATTAGCGACCCACACGTGGAGCACTACTTCATGCCCTTCGGCAAGGGTTGGTTCGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217678.2 |
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| 3UTR CCA 90 bp | AAGTCCATCCAGGAAGAATTCCAGATGTGCCACCCGGTTGAGGCGTaGGTCAAAGCCCACTTGGCGCACTTTGTCTGTGCGCGCCAGGAA | + |
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Preference number: 1 (lower is better) Translates to: KSIQEEFQMCHPVEA*VKAHLAHFVCARQE Trigger: TTCCTGGCGCGCACAGACAAAGTGCGCCAAGTGGGCTTTGACCCACGCCTCAACCGGGTGGCACATCTGGAATTCTTCCTGGATGGACTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217678.2 |
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| 3UTR TCA 90 bp | TCCCTGGGGTTGCAAATTGGGAGTTTCCCTGCCCACCTCGGGAGGTaGGAGTGTTTCCACTTGAGGGTCTTAGAGTCCTTCTGGGCTCTT | + |
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Preference number: 1 (lower is better) Translates to: SLGLQIGSFPAHLGR*ECFHLRVLESFWAL Trigger: AAGAGCCCAGAAGGACTCTAAGACCCTCAAGTGGAAACACTCTCACCTCCCGAGGTGGGCAGGGAAACTCCCAATTTGCAACCCCAGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
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| 3UTR GCA 90 bp | TCCCGGGTACCGGTAACGGGCATAAGTTTCAGCTCCTGGGTCTTTTaGTGTCCACGGCAGCTTCACCTTCGATGCATGATCCACAACAAC | + |
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Preference number: 1 (lower is better) Translates to: SRVPVTGISFSSWVF*CPRQLHLRCMIHNN Trigger: GTTGTTGTGGATCATGCATCGAAGGTGAAGCTGCCGTGGACAGCAAAAGACCCAGGAGCTGAAACTTATGCCCGTTACCGGTACCCGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217678.2 |
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| 3UTR TCA 90 bp | GCTCCTGGGTCTTTTGCTGTCCACGGCAGCTTCACCTTCGATGCATaGTCCACAACAACATCAGAGCAGGAGCCAACACGAAGGAAACCA | + |
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Preference number: 1 (lower is better) Translates to: APGSFAVHGSFTFDA*STTTSEQEPTRRKP Trigger: TGGTTTCCTTCGTGTTGGCTCCTGCTCTGATGTTGTTGTGGATCATGCATCGAAGGTGAAGCTGCCGTGGACAGCAAAAGACCCAGGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217678.2 |
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| 3UTR TCA 90 bp | CCCAAATCAGACGTCACTCGGCGGTCATGCACTGTAGCCGGTGTTTaGAGAAGAGTAGGCGATGTTTGGCCACTTGACTTTGGTCCAGTG | + |
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Preference number: 1 (lower is better) Translates to: PKSDVTRRSCTVAGV*RRVGDVWPLDFGPV Trigger: CACTGGACCAAAGTCAAGTGGCCAAACATCGCCTACTCTTCTTCAAACACCGGCTACAGTGCATGACCGCCGAGTGACGTCTGATTTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217678.2 |
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| 3UTR-3UTR GCA 90 bp | GGGTATGTGGGAGCCGGTACACACGGTGCTGGATCCAGAGCTGGGGTGGGGTGCCGCCAGGTTCCGACCTaGGAACCAACCCTTGCCGAA | + |
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Preference number: 2 (lower is better) Translates to: GYVGAGTHGAGSRAGVGCRQVPT*EPTLAE Trigger: TTCGGCAAGGGTTGGTTCGCAGGTCGGAACCTGGCG...GCACCCCACCCCAGCTCTGGATCCAGCACCGTGTGTACCGGCTCCCACATACCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217678.2 |
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| 3UTR-3UTR CCA 90 bp | GTGGGGGTATGTGGGAGCCGGTACACACGGTGCTGGATCCAGAGCTGGGGTGGGTTGTACTCGGCTCCTTaGGGTAGGGATGATGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: VGVCGSRYTRCWIQSWGGLYSAP*GRDDGG Trigger: CCCACCATCATCCCTACCCCAAGGAGCCGAGTACAA...CCCACCCCAGCTCTGGATCCAGCACCGTGTGTACCGGCTCCCACATACCCCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217678.2 |
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| 3UTR-3UTR TCA 90 bp | TGTCCCTGGGGTTGCAAATTGGGAGTTTCCCTGCCCACCTCGGGAGGTGAGAGTGAGGCAGGCCCAGCCTaGCAGTGTGAAGGCCCAAAT | + |
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Preference number: 2 (lower is better) Translates to: CPWGCKLGVSLPTSGGESEAGPA*QCEGPN Trigger: ATTTGGGCCTTCACACTGTCAGGCTGGGCCTGCCTC...ACTCTCACCTCCCGAGGTGGGCAGGGAAACTCCCAATTTGCAACCCCAGGGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
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| 3UTR-3UTR CCA 90 bp | ACCGCGCCCCCTACCAGGTCCAGGGGCGTCTTCTCGAGCACGTCCACAAGCTTCGGGCTCTTTGGCACTTaGAAAGTGAACCTCCCCATT | + |
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Preference number: 2 (lower is better) Translates to: TAPPTRSRGVFSSTSTSFGLFGT*KVNLPI Trigger: AATGGGGAGGTTCACTTTCCAAGTGCCAAAGAGCCC...GAAGCTTGTGGACGTGCTCGAGAAGACGCCCCTGGACCTGGTAGGGGGCGCGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000217678.2 |
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| 3UTR-3UTR TCA 90 bp | GGAAGGGTGTCACCAGGACAAGCCCCTGTTAGGAATCAGATTGGTGGAGAGGATGCCGCGTGCGCGCCGTaGAGACAAAGTCGTCGTCCA | + |
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Preference number: 2 (lower is better) Translates to: GRVSPGQAPVRNQIGGEDAACAP*RQSRRP Trigger: TGGACGACGACTTTGTCTTCACGGCGCGCACGCGGC...ATCCTCTCCACCAATCTGATTCCTAACAGGGGCTTGTCCTGGTGACACCCTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217678.2 |
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| 3UTR-3UTR TCA 90 bp | GGGTGGGGTGCATGTCCCTGGGGTTGCAAATTGGGAGTTTCCCTGCCCACCTCGCGATGTTTGGCCACTTaGCTTTGGTCCAGTGATCCC | + |
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Preference number: 2 (lower is better) Translates to: GWGACPWGCKLGVSLPTSRCLAT*LWSSDP Trigger: GGGATCACTGGACCAAAGTCAAGTGGCCAAACATCG...CGAGGTGGGCAGGGAAACTCCCAATTTGCAACCCCAGGGACATGCACCCCACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217678.2 |
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| 3UTR-3UTR CCA 90 bp | ACCGTGTGTTCACCAGCCCCACAGAACTACAGTCACAGTGCTTTCTGTGGGGGTCGGTACACACGGTGCTaGATCCAGAGCTGGGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: TVCSPAPQNYSHSAFCGGRYTRC*IQSWGG Trigger: CCCACCCCAGCTCTGGATCCAGCACCGTGTGTACCG...ACCCCCACAGAAAGCACTGTGACTGTAGTTCTGTGGGGCTGGTGAACACACGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
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| 3UTR-3UTR CCA 90 bp | CACCAGCCCCACAGAACTACAGTCACAGTGCTTTCTGTGGGGGTATGTGGGAGCCCAACGAGCTCGTGGTaGAAGCCCTGCTTTTGCCGG | + |
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Preference number: 2 (lower is better) Translates to: HQPHRTTVTVLSVGVCGSPTSSW*KPCFCR Trigger: CCGGCAAAAGCAGGGCTTCCACCACGAGCTCGTTGG...GCTCCCACATACCCCCACAGAAAGCACTGTGACTGTAGTTCTGTGGGGCTGGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000217678.2 |
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| 3UTR-3UTR TCA 90 bp | TGGGGTGCATGTCCCTGGGGTTGCAAATTGGGAGTTTCCCTGCCCACCTCGGGATTGGCACTTGGAAAGTaGACCTCCCCATTTCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: WGACPWGCKLGVSLPTSGLALGK*TSPFPA Trigger: GGCAGGAAATGGGGAGGTTCACTTTCCAAGTGCCAA...TCCCGAGGTGGGCAGGGAAACTCCCAATTTGCAACCCCAGGGACATGCACCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
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| 3UTR-3UTR TCA 90 bp | GGGAAGCCAACGAGCTCGTGGTGGAAGCCCTGCTTTTGCCGGAAGCAGTTCCCATTGGCACTTGGAAAGTaGACCTCCCCATTTCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: GKPTSSWWKPCFCRKQFPLALGK*TSPFPA Trigger: GGCAGGAAATGGGGAGGTTCACTTTCCAAGTGCCAA...TGGGAACTGCTTCCGGCAAAAGCAGGGCTTCCACCACGAGCTCGTTGGCTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217678.2 |
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| 3UTR-3UTR GCA 90 bp | GGATATGGCTCCATCGGGCCTCTGGTCGCTCACAGAAAGGAAGGGTGTCACCAGTGTTCATCAGTGGGGTaGACAGGGATGGAGGTGGTG | + |
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Preference number: 2 (lower is better) Translates to: GYGSIGPLVAHRKEGCHQCSSVG*TGMEVV Trigger: CACCACCTCCATCCCTGTGCACCCCACTGATGAACA...CTGGTGACACCCTTCCTTTCTGTGAGCGACCAGAGGCCCGATGGAGCCATATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
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| 3UTR-3UTR CCA 90 bp | GGGAAGCCAACGAGCTCGTGGTGGAAGCCCTGCTTTTGCCGGAAGCAGTTCCCAGCACAGGGATGGAGGTaGTGGTGGATAATCCTGGAA | + |
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Preference number: 2 (lower is better) Translates to: GKPTSSWWKPCFCRKQFPAQGWR*WWIILE Trigger: TTCCAGGATTATCCACCACCACCTCCATCCCTGTGC...TGGGAACTGCTTCCGGCAAAAGCAGGGCTTCCACCACGAGCTCGTTGGCTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217678.2 |
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| 3UTR-3UTR CCA 90 bp | GGATATGGCTCCATCGGGCCTCTGGTCGCTCACAGAAAGGAAGGGTGTCACCAGCCTGGGGTTGCAAATTaGGAGTTTCCCTGCCCACCT | + |
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Preference number: 2 (lower is better) Translates to: GYGSIGPLVAHRKEGCHQPGVAN*EFPCPP Trigger: AGGTGGGCAGGGAAACTCCCAATTTGCAACCCCAGG...CTGGTGACACCCTTCCTTTCTGTGAGCGACCAGAGGCCCGATGGAGCCATATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
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| 3UTR-3UTR TCA 90 bp | CTCTTTGGCACTTGGAAAGTGAACCTCCCCATTTCCTGCCCCATAGGAATGGGGGAGGCAGGCCCAGCCTaGCAGTGTGAAGGCCCAAAT | + |
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Preference number: 2 (lower is better) Translates to: LFGTWKVNLPISCPIGMGEAGPA*QCEGPN Trigger: ATTTGGGCCTTCACACTGTCAGGCTGGGCCTGCCTC...CCCCATTCCTATGGGGCAGGAAATGGGGAGGTTCACTTTCCAAGTGCCAAAGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
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| 3UTR-3UTR TCA 90 bp | GGGTGGGGTGCATGTCCCTGGGGTTGCAAATTGGGAGTTTCCCTGCCCACCTCGACTGTAGCCGGTGTTTaGAGAAGAGTAGGCGATGTT | + |
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Preference number: 2 (lower is better) Translates to: GWGACPWGCKLGVSLPTSTVAGV*RRVGDV Trigger: AACATCGCCTACTCTTCTTCAAACACCGGCTACAGT...CGAGGTGGGCAGGGAAACTCCCAATTTGCAACCCCAGGGACATGCACCCCACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217678.2 |
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| 3UTR-3UTR TCA 90 bp | CTCTTTGGCACTTGGAAAGTGAACCTCCCCATTTCCTGCCCCATAGGAATGGGGCCTTGCCGAAGGGCATaGAGTAGTGCTCCACGTGTG | + |
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Preference number: 2 (lower is better) Translates to: LFGTWKVNLPISCPIGMGPCRRA*SSAPRV Trigger: CACACGTGGAGCACTACTTCATGCCCTTCGGCAAGG...CCCCATTCCTATGGGGCAGGAAATGGGGAGGTTCACTTTCCAAGTGCCAAAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000217678.2 |
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| 3UTR-3UTR CCA 90 bp | GGATATGGCTCCATCGGGCCTCTGGTCGCTCACAGAAAGGAAGGGTGTCACCAGGGGCTCTTTGGCACTTaGAAAGTGAACCTCCCCATT | + |
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Preference number: 2 (lower is better) Translates to: GYGSIGPLVAHRKEGCHQGLFGT*KVNLPI Trigger: AATGGGGAGGTTCACTTTCCAAGTGCCAAAGAGCCC...CTGGTGACACCCTTCCTTTCTGTGAGCGACCAGAGGCCCGATGGAGCCATATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
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| 3UTR-3UTR CCA 90 bp | CCCCACAGAACTACAGTCACAGTGCTTTCTGTGGGGGTATGTGGGAGCCGGTACTGGGGTGCATGTCCCTaGGGTTGCAAATTGGGAGTT | + |
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Preference number: 2 (lower is better) Translates to: PHRTTVTVLSVGVCGSRYWGACP*GCKLGV Trigger: AACTCCCAATTTGCAACCCCAGGGACATGCACCCCA...GTACCGGCTCCCACATACCCCCACAGAAAGCACTGTGACTGTAGTTCTGTGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
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| 3UTR-3UTR GCA 90 bp | CGTGTGTTCACCAGCCCCACAGAACTACAGTCACAGTGCTTTCTGTGGGGGTATTGTTCATCAGTGGGGTaGACAGGGATGGAGGTGGTG | + |
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Preference number: 2 (lower is better) Translates to: RVFTSPTELQSQCFLWGYCSSVG*TGMEVV Trigger: CACCACCTCCATCCCTGTGCACCCCACTGATGAACA...ATACCCCCACAGAAAGCACTGTGACTGTAGTTCTGTGGGGCTGGTGAACACACG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
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| 3UTR-3UTR CCA 90 bp | CGTGTGTTCACCAGCCCCACAGAACTACAGTCACAGTGCTTTCTGTGGGGGTATTGGGGTGCACAGGGATaGAGGTGGTGGTGGATAATC | + |
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Preference number: 2 (lower is better) Translates to: RVFTSPTELQSQCFLWGYWGAQG*RWWWII Trigger: GATTATCCACCACCACCTCCATCCCTGTGCACCCCA...ATACCCCCACAGAAAGCACTGTGACTGTAGTTCTGTGGGGCTGGTGAACACACG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
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| 3UTR-3UTR CCA 90 bp | ACCGTGTGTTCACCAGCCCCACAGAACTACAGTCACAGTGCTTTCTGTGGGGGTATAGGAATGGGGTTGTaGGAGGACTTGGCACTGGCT | + |
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Preference number: 2 (lower is better) Translates to: TVCSPAPQNYSHSAFCGGIGMGL*EDLALA Trigger: AGCCAGTGCCAAGTCCTCCCACAACCCCATTCCTAT...ACCCCCACAGAAAGCACTGTGACTGTAGTTCTGTGGGGCTGGTGAACACACGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
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| 3UTR-3UTR CCA 90 bp | CTTGACTTTGGTCCAGTGATCCCGGGTACCGGTAACGGGCATAAGTTTCAGCTCCCTGGGGTTGCAAATTaGGAGTTTCCCTGCCCACCT | + |
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Preference number: 2 (lower is better) Translates to: LDFGPVIPGTGNGHKFQLPGVAN*EFPCPP Trigger: AGGTGGGCAGGGAAACTCCCAATTTGCAACCCCAGG...GAGCTGAAACTTATGCCCGTTACCGGTACCCGGGATCACTGGACCAAAGTCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217678.2 |
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| 3UTR-3UTR CCA 90 bp | ACCGGTAACGGGCATAAGTTTCAGCTCCTGGGTCTTTTGCTGTCCACGGCAGCTTGGGGTGCATGTCCCTaGGGTTGCAAATTGGGAGTT | + |
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Preference number: 2 (lower is better) Translates to: TGNGHKFQLLGLLLSTAAWGACP*GCKLGV Trigger: AACTCCCAATTTGCAACCCCAGGGACATGCACCCCA...AGCTGCCGTGGACAGCAAAAGACCCAGGAGCTGAAACTTATGCCCGTTACCGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217678.2 |
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| 3UTR-3UTR CCA 90 bp | GTGAGAGTGTTTCCACTTGAGGGTCTTAGAGTCCTTCTGGGCTCTTTGGCACTTTGCTGGATCCAGAGCTaGGGTGGGGTGCATGTCCCT | + |
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Preference number: 2 (lower is better) Translates to: VRVFPLEGLRVLLGSLALCWIQS*GGVHVP Trigger: AGGGACATGCACCCCACCCCAGCTCTGGATCCAGCA...AAGTGCCAAAGAGCCCAGAAGGACTCTAAGACCCTCAAGTGGAAACACTCTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
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| 3UTR-3UTR CCA 90 bp | CCCCACAGAACTACAGTCACAGTGCTTTCTGTGGGGGTATGTGGGAGCCGGTACTATTTGGTGGTTACTTaGGACACCGCCAGGTTCCGA | + |
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Preference number: 2 (lower is better) Translates to: PHRTTVTVLSVGVCGSRYYLVVT*DTARFR Trigger: TCGGAACCTGGCGGTGTCCCAAGTAACCACCAAATA...GTACCGGCTCCCACATACCCCCACAGAAAGCACTGTGACTGTAGTTCTGTGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217678.2 |
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| 3UTR-3UTR CCA 90 bp | ACCGGTAACGGGCATAAGTTTCAGCTCCTGGGTCTTTTGCTGTCCACGGCAGCTCCCACAGCACGTATTTaGTGGTTACTTGGGACACCG | + |
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Preference number: 2 (lower is better) Translates to: TGNGHKFQLLGLLLSTAAPTARI*WLLGTP Trigger: CGGTGTCCCAAGTAACCACCAAATACGTGCTGTGGG...AGCTGCCGTGGACAGCAAAAGACCCAGGAGCTGAAACTTATGCCCGTTACCGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217678.2 |
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| 3UTR-3UTR CCA 90 bp | AAGGCCCAAATCAGACGTCACTCGGCGGTCATGCACTGTAGCCGGTGTTTGAAGTGTGACCACACAACTTaGGAAGCCAACGAGCTCGTG | + |
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Preference number: 2 (lower is better) Translates to: KAQIRRHSAVMHCSRCLKCDHTT*EANELV Trigger: CACGAGCTCGTTGGCTTCCCAAGTTGTGTGGTCACA...CTTCAAACACCGGCTACAGTGCATGACCGCCGAGTGACGTCTGATTTGGGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217678.2 |
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| 3UTR CAA 90 bp | ATCCCGGGTACCGGTAACGGGCATAAGTTTCAGCTCCTGGGTCTTTaGCTGTCCACGGCAGCTTCACCTTCGATGCATGATCCACAACAA | + |
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Preference number: 2 (lower is better) Translates to: IPGTGNGHKFQLLGL*LSTAASPSMHDPQQ Trigger: TTGTTGTGGATCATGCATCGAAGGTGAAGCTGCCGTGGACAGCAAAAGACCCAGGAGCTGAAACTTATGCCCGTTACCGGTACCCGGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217678.2 |
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| 3UTR-3UTR GCA 90 bp | GTTGCAAATTGGGAGTTTCCCTGCCCACCTCGGGAGGTGAGAGTGTTTCCACTTGCATGTCCCTGGGGTTaGAAATTGGGAGTTTCCCTG | + |
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Preference number: 2 (lower is better) Translates to: VANWEFPCPPREVRVFPLACPWG*KLGVSL Trigger: CAGGGAAACTCCCAATTTGCAACCCCAGGGACATGC...AAGTGGAAACACTCTCACCTCCCGAGGTGGGCAGGGAAACTCCCAATTTGCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
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| 3UTR-3UTR GCA 90 bp | TGGCTTTCACCGTGTGTTCACCAGCCCCACAGAACTACAGTCACAGTGCTTTCTAACCTCCCCATTTCCTaGCCCATAGGAATGGGGTTG | + |
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Preference number: 2 (lower is better) Translates to: WLSPCVHQPHRTTVTVLSNLPIS*PIGMGL Trigger: CAACCCCATTCCTATGGGGCAGGAAATGGGGAGGTT...AGAAAGCACTGTGACTGTAGTTCTGTGGGGCTGGTGAACACACGGTGAAAGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
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| 3UTR-3UTR CCA 90 bp | CACCTTCGATGCATGATCCACAACAACATCAGAGCAGGAGCCAACACGAAGGAATGGGGTGCACAGGGATaGAGGTGGTGGTGGATAATC | + |
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Preference number: 2 (lower is better) Translates to: HLRCMIHNNIRAGANTKEWGAQG*RWWWII Trigger: GATTATCCACCACCACCTCCATCCCTGTGCACCCCA...TTCCTTCGTGTTGGCTCCTGCTCTGATGTTGTTGTGGATCATGCATCGAAGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217678.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGTGTTTCCACTTGAGGGTCTTAGAGTCCTTCTGGGCTCTTTGGCACTTGGAGCACAGGGATGGAGGTaGTGGTGGATAATCCTGGAA | + |
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Preference number: 2 (lower is better) Translates to: RVFPLEGLRVLLGSLALGAQGWR*WWIILE Trigger: TTCCAGGATTATCCACCACCACCTCCATCCCTGTGC...TCCAAGTGCCAAAGAGCCCAGAAGGACTCTAAGACCCTCAAGTGGAAACACTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
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| 3UTR-3UTR CCA 90 bp | GTGTTCACCAGCCCCACAGAACTACAGTCACAGTGCTTTCTGTGGGGGTATGTGGTCTTAGAGTCCTTCTaGGCTCTTTGGCACTTGGAA | + |
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Preference number: 2 (lower is better) Translates to: VFTSPTELQSQCFLWGYVVLESF*ALWHLE Trigger: TTCCAAGTGCCAAAGAGCCCAGAAGGACTCTAAGAC...CACATACCCCCACAGAAAGCACTGTGACTGTAGTTCTGTGGGGCTGGTGAACAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
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| 3UTR-3UTR GCA 90 bp | AGAGTGTTTCCACTTGAGGGTCTTAGAGTCCTTCTGGGCTCTTTGGCACTTGGAGAACTACAGTCACAGTaGTTTCTGTGGGGGTATGTG | + |
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Preference number: 2 (lower is better) Translates to: RVFPLEGLRVLLGSLALGELQSQ*FLWGYV Trigger: CACATACCCCCACAGAAAGCACTGTGACTGTAGTTC...TCCAAGTGCCAAAGAGCCCAGAAGGACTCTAAGACCCTCAAGTGGAAACACTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
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| 3UTR GCA 72 bp | GGGAAGCCAACGAGCTCGTGGTGGAAGCCCTGCTTTTaGCGGAAGCAGTTCCCAAGGCCTGGGGCGCCCGGC | + |
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Preference number: 3 (lower is better) Translates to: GKPTSSWWKPCF*RKQFPRPGAPG Trigger: GCCGGGCGCCCCAGGCCTTGGGAACTGCTTCCGGCAAAAGCAGGGCTTCCACCACGAGCTCGTTGGCTTCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217678.2 |
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| 3UTR CCA 72 bp | GTGCTGGATCCAGAGCTGGGGTGGGGTGCATGTCCCTaGGGTTGCAAATTGGGAGTTTCCCTGCCCACCTCG | + |
|
Preference number: 3 (lower is better) Translates to: VLDPELGWGACP*GCKLGVSLPTS Trigger: CGAGGTGGGCAGGGAAACTCCCAATTTGCAACCCCAGGGACATGCACCCCACCCCAGCTCTGGATCCAGCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGTATGTGGGAGCCGGTACACACGGTGCTGGATCCAGAGCTGGGGTGGGGTGCACCCACAGCACGTATTaGGTGGTTACTTGGGACACC | + |
|
Preference number: 3 (lower is better) Translates to: GYVGAGTHGAGSRAGVGCTHSTY*VVTWDT Trigger: GGTGTCCCAAGTAACCACCAAATACGTGCTGTGGGT...GCACCCCACCCCAGCTCTGGATCCAGCACCGTGTGTACCGGCTCCCACATACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217678.2 |
||
| 3UTR CCA 72 bp | ACCAGCCCCACAGAACTACAGTCACAGTGCTTTCTGTaGGGGTATGTGGGAGCCGGTACACACGGTGCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: TSPTELQSQCFL*GYVGAGTHGAG Trigger: TCCAGCACCGTGTGTACCGGCTCCCACATACCCCCACAGAAAGCACTGTGACTGTAGTTCTGTGGGGCTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
||
| 3UTR CCA 72 bp | ACCCTTGCCGAAGGGCATGAAGTAGTGCTCCACGTGTaGGTCGCTAATGCGCTCCGGTTTGTCACTGTCGTC | + |
|
Preference number: 3 (lower is better) Translates to: TLAEGHEVVLHV*VANALRFVTVV Trigger: GACGACAGTGACAAACCGGAGCGCATTAGCGACCCACACGTGGAGCACTACTTCATGCCCTTCGGCAAGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217678.2 |
||
| 3UTR CCA 72 bp | GTGACCACACAACTTGGGAAGCCAACGAGCTCGTGGTaGAAGCCCTGCTTTTGCCGGAAGCAGTTCCCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: VTTQLGKPTSSW*KPCFCRKQFPR Trigger: CCTTGGGAACTGCTTCCGGCAAAAGCAGGGCTTCCACCACGAGCTCGTTGGCTTCCCAAGTTGTGTGGTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217678.2 |
||
| 3UTR GCA 72 bp | TTTGGTGGTTACTTGGGACACCGCCAGGTTCCGACCTaGGAACCAACCCTTGCCGAAGGGCATGAAGTAGTG | + |
|
Preference number: 3 (lower is better) Translates to: FGGYLGHRQVPT*EPTLAEGHEVV Trigger: CACTACTTCATGCCCTTCGGCAAGGGTTGGTTCGCAGGTCGGAACCTGGCGGTGTCCCAAGTAACCACCAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217678.2 |
||
| 3UTR CCA 72 bp | GGAAGCCAGGGTGTTCATCAGTGGGGTGCACAGGGATaGAGGTGGTGGTGGATAATCCTGGAAGGAACAAGG | + |
|
Preference number: 3 (lower is better) Translates to: GSQGVHQWGAQG*RWWWIILEGTR Trigger: CCTTGTTCCTTCCAGGATTATCCACCACCACCTCCATCCCTGTGCACCCCACTGATGAACACCCTGGCTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
||
| 3UTR-3UTR CAA 90 bp | CGTGTGTTCACCAGCCCCACAGAACTACAGTCACAGTGCTTTCTGTGGGGGTATGTGGAAGCCCTGCTTTaGCCGGAAGCAGTTCCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: RVFTSPTELQSQCFLWGYVEALL*PEAVPK Trigger: CTTGGGAACTGCTTCCGGCAAAAGCAGGGCTTCCAC...ATACCCCCACAGAAAGCACTGTGACTGTAGTTCTGTGGGGCTGGTGAACACACG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217678.2 |
||
| 3UTR-3UTR CAA 90 bp | CACCTTCGATGCATGATCCACAACAACATCAGAGCAGGAGCCAACACGAAGGAACGCGCCAGGAAGAAGTaGACCACGCCGTCTGTGACC | + |
|
Preference number: 3 (lower is better) Translates to: HLRCMIHNNIRAGANTKERARKK*TTPSVT Trigger: GGTCACAGACGGCGTGGTCAACTTCTTCCTGGCGCG...TTCCTTCGTGTTGGCTCCTGCTCTGATGTTGTTGTGGATCATGCATCGAAGGTG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217678.2 |
||
| 3UTR GCA 72 bp | CTCTTTGGCACTTGGAAAGTGAACCTCCCCATTTCCTaGCCCATAGGAATGGGGTTGTGGGAGGACTTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: LFGTWKVNLPIS*PIGMGLWEDLA Trigger: TGCCAAGTCCTCCCACAACCCCATTCCTATGGGGCAGGAAATGGGGAGGTTCACTTTCCAAGTGCCAAAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
||
| 3UTR GCA 72 bp | AAGGAAACCAAGTCCATCCAGGAAGAATTCCAGATGTaGCACCCGGTTGAGGCGTGGGTCAAAGCCCACTTG | + |
|
Preference number: 3 (lower is better) Translates to: KETKSIQEEFQM*HPVEAWVKAHL Trigger: CAAGTGGGCTTTGACCCACGCCTCAACCGGGTGGCACATCTGGAATTCTTCCTGGATGGACTTGGTTTCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217678.2 |
||
| 3UTR GCA 72 bp | CCGGTAACGGGCATAAGTTTCAGCTCCTGGGTCTTTTaGTGTCCACGGCAGCTTCACCTTCGATGCATGATC | + |
|
Preference number: 3 (lower is better) Translates to: PVTGISFSSWVF*CPRQLHLRCMI Trigger: GATCATGCATCGAAGGTGAAGCTGCCGTGGACAGCAAAAGACCCAGGAGCTGAAACTTATGCCCGTTACCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217678.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGGCCCAAATCAGACGTCACTCGGCGGTCATGCACTGTAGCCGGTGTTTGAAGCTGTTAGGAATCAGATaGGTGGAGAGGATCGGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: KAQIRRHSAVMHCSRCLKLLGIR*VERIGK Trigger: CTTCCCGATCCTCTCCACCAATCTGATTCCTAACAG...CTTCAAACACCGGCTACAGTGCATGACCGCCGAGTGACGTCTGATTTGGGCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217678.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGGTGAGAGTGTTTCCACTTGAGGGTCTTAGAGTCCTTCTGGGCTCTTTGGCACTAATGCGCTCCGGTTaGTCACTGTCGTCAGCGATG | + |
|
Preference number: 3 (lower is better) Translates to: EVRVFPLEGLRVLLGSLALMRSG*SLSSAM Trigger: CATCGCTGACGACAGTGACAAACCGGAGCGCATTAG...TGCCAAAGAGCCCAGAAGGACTCTAAGACCCTCAAGTGGAAACACTCTCACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217678.2 |
||
| 3UTR TCA 72 bp | TTGCAAATTGGGAGTTTCCCTGCCCACCTCGGGAGGTaGGAGTGTTTCCACTTGAGGGTCTTAGAGTCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: LQIGSFPAHLGR*ECFHLRVLESF Trigger: GAAGGACTCTAAGACCCTCAAGTGGAAACACTCTCACCTCCCGAGGTGGGCAGGGAAACTCCCAATTTGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
||
| 3UTR TCA 72 bp | GACGTCACTCGGCGGTCATGCACTGTAGCCGGTGTTTaGAGAAGAGTAGGCGATGTTTGGCCACTTGACTTT | + |
|
Preference number: 3 (lower is better) Translates to: DVTRRSCTVAGV*RRVGDVWPLDF Trigger: AAAGTCAAGTGGCCAAACATCGCCTACTCTTCTTCAAACACCGGCTACAGTGCATGACCGCCGAGTGACGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217678.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGTTCACCAGCCCCACAGAACTACAGTCACAGTGCTTTCTGTGGGGGTATGTGCTGTTAGGAATCAGATaGGTGGAGAGGATCGGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: VFTSPTELQSQCFLWGYVLLGIR*VERIGK Trigger: CTTCCCGATCCTCTCCACCAATCTGATTCCTAACAG...CACATACCCCCACAGAAAGCACTGTGACTGTAGTTCTGTGGGGCTGGTGAACAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
||
| 3UTR TCA 72 bp | TCTTTTGCTGTCCACGGCAGCTTCACCTTCGATGCATaGTCCACAACAACATCAGAGCAGGAGCCAACACGA | + |
|
Preference number: 3 (lower is better) Translates to: SFAVHGSFTFDA*STTTSEQEPTR Trigger: TCGTGTTGGCTCCTGCTCTGATGTTGTTGTGGATCATGCATCGAAGGTGAAGCTGCCGTGGACAGCAAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217678.2 |
||
| CDS-3UTR TCA 90 bp | GTGGGGGTATGTGGGAGCCGGTACACACGGTGCTGGATCCAGAGCTGGGGTGGGATGCTCCTGAGGGGCTaGACCTCCACACCCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VGVCGSRYTRCWIQSWGGMLLRG*TSTPCR Trigger: CCTGCAGGGTGTGGAGGTTCAGCCCCTCAGGAGCAT...CCCACCCCAGCTCTGGATCCAGCACCGTGTGTACCGGCTCCCACATACCCCCAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
||
| CDS-3UTR GCA 90 bp | ACCGCGCCCCCTACCAGGTCCAGGGGCGTCTTCTCGAGCACGTCCACAAGCTTCAGCAGCCCCACCACTTaGTCCTTGATCCTGACCGGG | + |
|
Preference number: 4 (lower is better) Translates to: TAPPTRSRGVFSSTSTSFSSPTT*SLILTG Trigger: CCCGGTCAGGATCAAGGAGCAAGTGGTGGGGCTGCT...GAAGCTTGTGGACGTGCTCGAGAAGACGCCCCTGGACCTGGTAGGGGGCGCGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000217678.2 |
||
| CDS-3UTR CCA 90 bp | GTGGGGGTATGTGGGAGCCGGTACACACGGTGCTGGATCCAGAGCTGGGGTGGGCTGTGTCTGCTGTGTTaGCCTGGTAGCTCCGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VGVCGSRYTRCWIQSWGGLCLLC*PGSSGC Trigger: GCAGCCGGAGCTACCAGGCCAACACAGCAGACACAG...CCCACCCCAGCTCTGGATCCAGCACCGTGTGTACCGGCTCCCACATACCCCCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006914.11 |
||
| CDS-3UTR TCA 90 bp | TGGGGTGCATGTCCCTGGGGTTGCAAATTGGGAGTTTCCCTGCCCACCTCGGGAGCCGCGTGCGCGCCGTaGAGACAAAGTCGTCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: WGACPWGCKLGVSLPTSGAACAP*RQSRRP Trigger: TGGACGACGACTTTGTCTTCACGGCGCGCACGCGGC...TCCCGAGGTGGGCAGGGAAACTCCCAATTTGCAACCCCAGGGACATGCACCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006914.11 |
||
| CDS-3UTR GCA 90 bp | CCAGGTCCAGGGGCGTCTTCTCGAGCACGTCCACAAGCTTCTCCAGCCGCGTGCCAGGGACCGGCTCCTTaGAAGGAAGGCCTGGTATTC | + |
|
Preference number: 4 (lower is better) Translates to: PGPGASSRARPQASPAACQGPAP*KEGLVF Trigger: GAATACCAGGCCTTCCTTGCAAGGAGCCGGTCCCTG...GCACGCGGCTGGAGAAGCTTGTGGACGTGCTCGAGAAGACGCCCCTGGACCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217678.2 |
||
| CDS-3UTR GCA 90 bp | GGATATGGCTCCATCGGGCCTCTGGTCGCTCACAGAAAGGAAGGGTGTCACCAGCCTGACCGGGATGTGTaGGTAGCGAGGCTCAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GYGSIGPLVAHRKEGCHQPDRDV*VARLRG Trigger: GCCCCTGAGCCTCGCTACGCACACATCCCGGTCAGG...CTGGTGACACCCTTCCTTTCTGTGAGCGACCAGAGGCCCGATGGAGCCATATCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
||
| CDS-3UTR GCA 90 bp | GTGGGGGTATGTGGGAGCCGGTACACACGGTGCTGGATCCAGAGCTGGGGTGGGTGGAAGCCCTGCTTTTaGCGGAAGCAGTTCCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VGVCGSRYTRCWIQSWGGWKPCF*RKQFPR Trigger: CCTTGGGAACTGCTTCCGGCAAAAGCAGGGCTTCCA...CCCACCCCAGCTCTGGATCCAGCACCGTGTGTACCGGCTCCCACATACCCCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000006914.11 |
||
| CDS-3UTR CCA 90 bp | TGGAGAGGATCGGGAAGCCAGGGTGTTCATCAGTGGGGTGCACAGGGATGGAGGGGAGCTATCAGCAGCTaGTCAGCCAGGGACCGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: WRGSGSQGVHQWGAQGWRGAISS*SARDRL Trigger: GAGCCGGTCCCTGGCTGACCAGCTGCTGATAGCTCC...CCTCCATCCCTGTGCACCCCACTGATGAACACCCTGGCTTCCCGATCCTCTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
||
| CDS-3UTR TCA 90 bp | CCTCGGGAGGTGAGAGTGTTTCCACTTGAGGGTCTTAGAGTCCTTCTGGGCTCTCTGGGCTGGCAAGGGTaGGATCCGGTTGCCCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PREVRVFPLEGLRVLLGSLGWQG*DPVAPL Trigger: GAGAGGGGCAACCGGATCTCACCCTTGCCAGCCCAG...AGAGCCCAGAAGGACTCTAAGACCCTCAAGTGGAAACACTCTCACCTCCCGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006914.11 |
||
| CDS-3UTR TCA 90 bp | ACCGGTAACGGGCATAAGTTTCAGCTCCTGGGTCTTTTGCTGTCCACGGCAGCTATGCTCCTGAGGGGCTaGACCTCCACACCCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TGNGHKFQLLGLLLSTAAMLLRG*TSTPCR Trigger: CCTGCAGGGTGTGGAGGTTCAGCCCCTCAGGAGCAT...AGCTGCCGTGGACAGCAAAAGACCCAGGAGCTGAAACTTATGCCCGTTACCGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217678.2 |
||
| CDS-3UTR TCA 90 bp | CCTCGGGAGGTGAGAGTGTTTCCACTTGAGGGTCTTAGAGTCCTTCTGGGCTCTGCACCAGGATGCTCCTaGGGGGCTGAACCTCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: PREVRVFPLEGLRVLLGSAPGCS*GAEPPH Trigger: GTGTGGAGGTTCAGCCCCTCAGGAGCATCCTGGTGC...AGAGCCCAGAAGGACTCTAAGACCCTCAAGTGGAAACACTCTCACCTCCCGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
||
| CDS-3UTR GCA 90 bp | CTCTTTGGCACTTGGAAAGTGAACCTCCCCATTTCCTGCCCCATAGGAATGGGGCCTGACCGGGATGTGTaGGTAGCGAGGCTCAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LFGTWKVNLPISCPIGMGPDRDV*VARLRG Trigger: GCCCCTGAGCCTCGCTACGCACACATCCCGGTCAGG...CCCCATTCCTATGGGGCAGGAAATGGGGAGGTTCACTTTCCAAGTGCCAAAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
||
| CDS-3UTR GCA 90 bp | GGATATGGCTCCATCGGGCCTCTGGTCGCTCACAGAAAGGAAGGGTGTCACCAGCTGCCACGTCCCAGGTaGCTAGAGAAGCACTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GYGSIGPLVAHRKEGCHQLPRPR*LEKHSG Trigger: ACCTGAGTGCTTCTCTAGGCACCTGGGACGTGGCAG...CTGGTGACACCCTTCCTTTCTGTGAGCGACCAGAGGCCCGATGGAGCCATATCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006914.11 |
||
| CDS-3UTR GCA 90 bp | ATATGGCTCCATCGGGCCTCTGGTCGCTCACAGAAAGGAAGGGTGTCACCAGGAAGGGTGAGATCCGGTTaGCCCTCTCCCGTGAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: IWLHRASGRSQKGRVSPGRVRSG*PSPVRV Trigger: GACTCTCACGGGAGAGGGGCAACCGGATCTCACCCT...TCCTGGTGACACCCTTCCTTTCTGTGAGCGACCAGAGGCCCGATGGAGCCATAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006914.11 |
||
| CDS-3UTR CCA 90 bp | CACGTGTGGGTCGCTAATGCGCTCCGGTTTGTCACTGTCGTCAGCGATGACTATGGAGCTATCAGCAGCTaGTCAGCCAGGGACCGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HVWVANALRFVTVVSDDYGAISS*SARDRL Trigger: GAGCCGGTCCCTGGCTGACCAGCTGCTGATAGCTCC...ATAGTCATCGCTGACGACAGTGACAAACCGGAGCGCATTAGCGACCCACACGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217678.2 |
||
| CDS-3UTR TCA 90 bp | CACCAGCCCCACAGAACTACAGTCACAGTGCTTTCTGTGGGGGTATGTGGGAGCCAACTGCAGTTGTTCTaGGCCAGCAGCCCCACCACT | + |
|
Preference number: 4 (lower is better) Translates to: HQPHRTTVTVLSVGVCGSQLQLF*ASSPTT Trigger: AGTGGTGGGGCTGCTGGCTCAGAACAACTGCAGTTG...GCTCCCACATACCCCCACAGAAAGCACTGTGACTGTAGTTCTGTGGGGCTGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
||
| CDS-3UTR TCA 90 bp | GGATATGGCTCCATCGGGCCTCTGGTCGCTCACAGAAAGGAAGGGTGTCACCAGGTTGCCCCTCTCCCGTaGGAGTCACTCCTGTTACTT | + |
|
Preference number: 4 (lower is better) Translates to: GYGSIGPLVAHRKEGCHQVAPLP*ESLLLL Trigger: AAGTAACAGGAGTGACTCTCACGGGAGAGGGGCAAC...CTGGTGACACCCTTCCTTTCTGTGAGCGACCAGAGGCCCGATGGAGCCATATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006914.11 |
||
| CDS-3UTR TCA 90 bp | CCCCACAGAACTACAGTCACAGTGCTTTCTGTGGGGGTATGTGGGAGCCGGTACCCTTGCCGAAGGGCATaGAGTAGTGCTCCACGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PHRTTVTVLSVGVCGSRYPCRRA*SSAPRV Trigger: CACACGTGGAGCACTACTTCATGCCCTTCGGCAAGG...GTACCGGCTCCCACATACCCCCACAGAAAGCACTGTGACTGTAGTTCTGTGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006914.11 |
||
| CDS-3UTR CCA 90 bp | TGTCCCTGGGGTTGCAAATTGGGAGTTTCCCTGCCCACCTCGGGAGGTGAGAGTTTGTACTCGGCTCCTTaGGGTAGGGATGATGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: CPWGCKLGVSLPTSGGESLYSAP*GRDDGG Trigger: CCCACCATCATCCCTACCCCAAGGAGCCGAGTACAA...ACTCTCACCTCCCGAGGTGGGCAGGGAAACTCCCAATTTGCAACCCCAGGGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006914.11 |
||
| CDS-3UTR GCA 90 bp | CTCTTTGGCACTTGGAAAGTGAACCTCCCCATTTCCTGCCCCATAGGAATGGGGAGCAGCCCCACCACTTaGTCCTTGATCCTGACCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LFGTWKVNLPISCPIGMGSSPTT*SLILTG Trigger: CCCGGTCAGGATCAAGGAGCAAGTGGTGGGGCTGCT...CCCCATTCCTATGGGGCAGGAAATGGGGAGGTTCACTTTCCAAGTGCCAAAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
||
| CDS-3UTR GCA 90 bp | TCAGATTGGTGGAGAGGATCGGGAAGCCAGGGTGTTCATCAGTGGGGTGCACAGTGGACAGAAGCTTCCTaGAGACTTAGCCCTGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: SDWWRGSGSQGVHQWGAQWTEAS*RLSPGT Trigger: GGTGCCAGGGCTAAGTCTGCAGGAAGCTTCTGTCCA...CTGTGCACCCCACTGATGAACACCCTGGCTTCCCGATCCTCTCCACCAATCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
||
| CDS-3UTR GCA 90 bp | CACCAGCCCCACAGAACTACAGTCACAGTGCTTTCTGTGGGGGTATGTGGGAGCTCGTGGTGGAAGCCCTaGTTTTGCCGGAAGCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HQPHRTTVTVLSVGVCGSSWWKP*FCRKQF Trigger: GAACTGCTTCCGGCAAAAGCAGGGCTTCCACCACGA...GCTCCCACATACCCCCACAGAAAGCACTGTGACTGTAGTTCTGTGGGGCTGGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000006914.11 |
||
| CDS-3UTR CCA 90 bp | CGTGTGTTCACCAGCCCCACAGAACTACAGTCACAGTGCTTTCTGTGGGGGTATCCAACGAGCTCGTGGTaGAAGCCCTGCTTTTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: RVFTSPTELQSQCFLWGYPTSSW*KPCFCR Trigger: CCGGCAAAAGCAGGGCTTCCACCACGAGCTCGTTGG...ATACCCCCACAGAAAGCACTGTGACTGTAGTTCTGTGGGGCTGGTGAACACACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000006914.11 |
||
| CDS-3UTR TCA 90 bp | GCTCTTTGGCACTTGGAAAGTGAACCTCCCCATTTCCTGCCCCATAGGAATGGGCAACTGCAGTTGTTCTaGGCCAGCAGCCCCACCACT | + |
|
Preference number: 4 (lower is better) Translates to: ALWHLESEPPHFLPHRNGQLQLF*ASSPTT Trigger: AGTGGTGGGGCTGCTGGCTCAGAACAACTGCAGTTG...CCCATTCCTATGGGGCAGGAAATGGGGAGGTTCACTTTCCAAGTGCCAAAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
||
| CDS-3UTR GCA 90 bp | GCTCTTTGGCACTTGGAAAGTGAACCTCCCCATTTCCTGCCCCATAGGAATGGGCAGGGACCGGCTCCTTaGAAGGAAGGCCTGGTATTC | + |
|
Preference number: 4 (lower is better) Translates to: ALWHLESEPPHFLPHRNGQGPAP*KEGLVF Trigger: GAATACCAGGCCTTCCTTGCAAGGAGCCGGTCCCTG...CCCATTCCTATGGGGCAGGAAATGGGGAGGTTCACTTTCCAAGTGCCAAAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
||
| CDS-3UTR CCA 90 bp | TGTCCCTGGGGTTGCAAATTGGGAGTTTCCCTGCCCACCTCGGGAGGTGAGAGTACAGCACGTATTTGGTaGTTACTTGGGACACCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CPWGCKLGVSLPTSGGESTARIW*LLGTPP Trigger: TGGCGGTGTCCCAAGTAACCACCAAATACGTGCTGT...ACTCTCACCTCCCGAGGTGGGCAGGGAAACTCCCAATTTGCAACCCCAGGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006914.11 |
||
| CDS-3UTR GCA 90 bp | TTAGGAATCAGATTGGTGGAGAGGATCGGGAAGCCAGGGTGTTCATCAGTGGGGTGGACAGAAGCTTCCTaGAGACTTAGCCCTGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: LGIRLVERIGKPGCSSVGWTEAS*RLSPGT Trigger: GGTGCCAGGGCTAAGTCTGCAGGAAGCTTCTGTCCA...CCCCACTGATGAACACCCTGGCTTCCCGATCCTCTCCACCAATCTGATTCCTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
||
| CDS-3UTR GCA 90 bp | GTGAGAGTGTTTCCACTTGAGGGTCTTAGAGTCCTTCTGGGCTCTTTGGCACTTCGCCAGGTTCCGACCTaGGAACCAACCCTTGCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: VRVFPLEGLRVLLGSLALRQVPT*EPTLAE Trigger: TTCGGCAAGGGTTGGTTCGCAGGTCGGAACCTGGCG...AAGTGCCAAAGAGCCCAGAAGGACTCTAAGACCCTCAAGTGGAAACACTCTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006914.11 |
||
| CDS-3UTR CCA 90 bp | CGTGTGTTCACCAGCCCCACAGAACTACAGTCACAGTGCTTTCTGTGGGGGTATCTTCATGTCCCTTGGTaGAGAACCGGACTGTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RVFTSPTELQSQCFLWGYLHVPW*RTGLCL Trigger: CAGACACAGTCCGGTTCTCCACCAAGGGACATGAAG...ATACCCCCACAGAAAGCACTGTGACTGTAGTTCTGTGGGGCTGGTGAACACACG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006914.11 |
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| CDS-3UTR CCA 90 bp | CTCTTTGGCACTTGGAAAGTGAACCTCCCCATTTCCTGCCCCATAGGAATGGGGTGTGACCACACAACTTaGGAAGCCAACGAGCTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: LFGTWKVNLPISCPIGMGCDHTT*EANELV Trigger: CACGAGCTCGTTGGCTTCCCAAGTTGTGTGGTCACA...CCCCATTCCTATGGGGCAGGAAATGGGGAGGTTCACTTTCCAAGTGCCAAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006914.11 |
||
| 3UTR CAA 72 bp | ACCGGTAACGGGCATAAGTTTCAGCTCCTGGGTCTTTaGCTGTCCACGGCAGCTTCACCTTCGATGCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: TGNGHKFQLLGL*LSTAASPSMHD Trigger: ATCATGCATCGAAGGTGAAGCTGCCGTGGACAGCAAAAGACCCAGGAGCTGAAACTTATGCCCGTTACCGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217678.2 |
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| CDS-3UTR TCA 90 bp | CCTGTTAGGAATCAGATTGGTGGAGAGGATCGGGAAGCCAGGGTGTTCATCAGTCGATGTTTGGCCACTTaGCTTTGGTCCAGTGATCCC | + |
|
Preference number: 4 (lower is better) Translates to: PVRNQIGGEDREARVFISRCLAT*LWSSDP Trigger: GGGATCACTGGACCAAAGTCAAGTGGCCAAACATCG...ACTGATGAACACCCTGGCTTCCCGATCCTCTCCACCAATCTGATTCCTAACAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006914.11 |
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| CDS-3UTR CCA 90 bp | TTCACCAGCCCCACAGAACTACAGTCACAGTGCTTTCTGTGGGGGTATGTGGGACAACTTCATGTCCCTTaGTGGAGAACCGGACTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: FTSPTELQSQCFLWGYVGQLHVP*WRTGLC Trigger: ACACAGTCCGGTTCTCCACCAAGGGACATGAAGTTG...TCCCACATACCCCCACAGAAAGCACTGTGACTGTAGTTCTGTGGGGCTGGTGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006914.11 |
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| CDS-3UTR GCA 90 bp | GTTGCAAATTGGGAGTTTCCCTGCCCACCTCGGGAGGTGAGAGTGTTTCCACTTCCTTGGATTCACAACTaGAGTTGTTCTGAGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VANWEFPCPPREVRVFPLPWIHN*SCSEPA Trigger: TGCTGGCTCAGAACAACTGCAGTTGTGAATCCAAGG...AAGTGGAAACACTCTCACCTCCCGAGGTGGGCAGGGAAACTCCCAATTTGCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
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| CDS-3UTR CCA 90 bp | GAGGTGAGAGTGTTTCCACTTGAGGGTCTTAGAGTCCTTCTGGGCTCTTTGGCATATTTGGTGGTTACTTaGGACACCGCCAGGTTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: EVRVFPLEGLRVLLGSLAYLVVT*DTARFR Trigger: TCGGAACCTGGCGGTGTCCCAAGTAACCACCAAATA...TGCCAAAGAGCCCAGAAGGACTCTAAGACCCTCAAGTGGAAACACTCTCACCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006914.11 |
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| CDS-3UTR CCA 90 bp | AGAGTGTTTCCACTTGAGGGTCTTAGAGTCCTTCTGGGCTCTTTGGCACTTGGACCCACAGCACGTATTTaGTGGTTACTTGGGACACCG | + |
|
Preference number: 4 (lower is better) Translates to: RVFPLEGLRVLLGSLALGPTARI*WLLGTP Trigger: CGGTGTCCCAAGTAACCACCAAATACGTGCTGTGGG...TCCAAGTGCCAAAGAGCCCAGAAGGACTCTAAGACCCTCAAGTGGAAACACTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006914.11 |
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| CDS-3UTR CCA 90 bp | CCTGTTAGGAATCAGATTGGTGGAGAGGATCGGGAAGCCAGGGTGTTCATCAGTCAACTTCATGTCCCTTaGTGGAGAACCGGACTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: PVRNQIGGEDREARVFISQLHVP*WRTGLV Trigger: TACCAGTCCGGTTCTCCACCAAGGGACATGAAGTTG...ACTGATGAACACCCTGGCTTCCCGATCCTCTCCACCAATCTGATTCCTAACAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217678.2 |
||
| CDS-3UTR CCA 90 bp | GAGGTGAGAGTGTTTCCACTTGAGGGTCTTAGAGTCCTTCTGGGCTCTTTGGCAGCACTCAGGTTCACCTaGTATATCTCCTGGACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: EVRVFPLEGLRVLLGSLAALRFT*YISWTE Trigger: TTCTGTCCAGGAGATATACCAGGTGAACCTGAGTGC...TGCCAAAGAGCCCAGAAGGACTCTAAGACCCTCAAGTGGAAACACTCTCACCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006914.11 |
||
| CDS-3UTR CCA 90 bp | CCTGTTAGGAATCAGATTGGTGGAGAGGATCGGGAAGCCAGGGTGTTCATCAGTCTTCATGTCCCTTGGTaGAGAACCGGACTGGTATAT | + |
|
Preference number: 4 (lower is better) Translates to: PVRNQIGGEDREARVFISLHVPW*RTGLVY Trigger: ATATACCAGTCCGGTTCTCCACCAAGGGACATGAAG...ACTGATGAACACCCTGGCTTCCCGATCCTCTCCACCAATCTGATTCCTAACAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217678.2 |
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| CDS-3UTR CAA 90 bp | GGGTATGTGGGAGCCGGTACACACGGTGCTGGATCCAGAGCTGGGGTGGGGTGCGAGGGTTCGGGAGACTaGGCGCGTTTCGGGTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GYVGAGTHGAGSRAGVGCEGSGD*ARFGCW Trigger: CCAGCACCCGAAACGCGCCAAGTCTCCCGAACCCTC...GCACCCCACCCCAGCTCTGGATCCAGCACCGTGTGTACCGGCTCCCACATACCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
||
| CDS CCA 90 bp | GGGACCTTGTGGGGGCGACCACAATGCCAGAGGGTTCGGGAGACTTaGCGCGTTTCGGGTGCTGGAGTACAGGAGACCCAGCGAGGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: GTLWGRPQCQRVRET*RVSGAGVQETQRGA Trigger: TGCGCCTCGCTGGGTCTCCTGTACTCCAGCACCCGAAACGCGCCAAGTCTCCCGAACCCTCTGGCATTGTGGTCGCCCCCACAAGGTCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
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| CDS GCA 90 bp | GCGACCACAATGCCAGAGGGTTCGGGAGACTTGGCGCGTTTCGGGTaGTGGAGTACAGGAGACCCAGCGAGGCGCAGGCGAGCAGCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: ATTMPEGSGDLARFG*WSTGDPARRRRAAR Trigger: TCTTGCTGCTCGCCTGCGCCTCGCTGGGTCTCCTGTACTCCAGCACCCGAAACGCGCCAAGTCTCCCGAACCCTCTGGCATTGTGGTCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
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| CDS-3UTR CAA 90 bp | GGGTATGTGGGAGCCGGTACACACGGTGCTGGATCCAGAGCTGGGGTGGGGTGCGTGGAAGCCCTGCTTTaGCCGGAAGCAGTTCCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: GYVGAGTHGAGSRAGVGCVEALL*PEAVPK Trigger: CTTGGGAACTGCTTCCGGCAAAAGCAGGGCTTCCAC...GCACCCCACCCCAGCTCTGGATCCAGCACCGTGTGTACCGGCTCCCACATACCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006914.11 |
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| CDS TCA 90 bp | GGACAGAAGCTTCCTGCAGACTTAGCCCTGGCACCAGGATGCTCCTaGGGGGCTGAACCTCCACACCCTGCAGGGGGTACTGTAAGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GQKLPADLALAPGCS*GAEPPHPAGGTVRG Trigger: CCCCCTTACAGTACCCCCTGCAGGGTGTGGAGGTTCAGCCCCTCAGGAGCATCCTGGTGCCAGGGCTAAGTCTGCAGGAAGCTTCTGTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
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| CDS GCA 90 bp | GTTGGCGGGAGCTATCAGCAGCTGGTCAGCCAGGGACCGGCTCCTTaGAAGGAAGGCCTGGTATTCCTGCTCCCTGGCGACAGAAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: VGGSYQQLVSQGPAP*KEGLVFLLPGDRNS Trigger: GCTGTTTCTGTCGCCAGGGAGCAGGAATACCAGGCCTTCCTTGCAAGGAGCCGGTCCCTGGCTGACCAGCTGCTGATAGCTCCCGCCAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
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| CDS CCA 90 bp | ACCACAATGCCAGAGGGTTCGGGAGACTTGGCGCGTTTCGGGTGCTaGAGTACAGGAGACCCAGCGAGGCGCAGGCGAGCAGCAAGACTA | + |
|
Preference number: 5 (lower is better) Translates to: TTMPEGSGDLARFGC*STGDPARRRRAARL Trigger: TAGTCTTGCTGCTCGCCTGCGCCTCGCTGGGTCTCCTGTACTCCAGCACCCGAAACGCGCCAAGTCTCCCGAACCCTCTGGCATTGTGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
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| CDS CCA 90 bp | TGCAGGGGGTACTGTAAGGGGGAGTTGGCGGGAGCTATCAGCAGCTaGTCAGCCAGGGACCGGCTCCTTGCAAGGAAGGCCTGGTATTCC | + |
|
Preference number: 5 (lower is better) Translates to: CRGYCKGELAGAISS*SARDRLLARKAWYS Trigger: GGAATACCAGGCCTTCCTTGCAAGGAGCCGGTCCCTGGCTGACCAGCTGCTGATAGCTCCCGCCAACTCCCCCTTACAGTACCCCCTGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
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| CDS-3UTR CAA 90 bp | TGCTCCACGTGTGGGTCGCTAATGCGCTCCGGTTTGTCACTGTCGTCAGCGATGGAGGGTTCGGGAGACTaGGCGCGTTTCGGGTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CSTCGSLMRSGLSLSSAMEGSGD*ARFGCW Trigger: CCAGCACCCGAAACGCGCCAAGTCTCCCGAACCCTC...CATCGCTGACGACAGTGACAAACCGGAGCGCATTAGCGACCCACACGTGGAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217678.2 |
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| CDS-3UTR CAA 90 bp | GGGTGGGGTGCATGTCCCTGGGGTTGCAAATTGGGAGTTTCCCTGCCCACCTCGCCAGGGACCGGCTCCTaGCAAGGAAGGCCTGGTATT | + |
|
Preference number: 5 (lower is better) Translates to: GWGACPWGCKLGVSLPTSPGTGS*QGRPGI Trigger: AATACCAGGCCTTCCTTGCAAGGAGCCGGTCCCTGG...CGAGGTGGGCAGGGAAACTCCCAATTTGCAACCCCAGGGACATGCACCCCACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
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| CDS-3UTR CAA 90 bp | TGTCCCTGGGGTTGCAAATTGGGAGTTTCCCTGCCCACCTCGGGAGGTGAGAGTCGCGCCAGGAAGAAGTaGACCACGCCGTCTGTGACC | + |
|
Preference number: 5 (lower is better) Translates to: CPWGCKLGVSLPTSGGESRARKK*TTPSVT Trigger: GGTCACAGACGGCGTGGTCAACTTCTTCCTGGCGCG...ACTCTCACCTCCCGAGGTGGGCAGGGAAACTCCCAATTTGCAACCCCAGGGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006914.11 |
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| CDS-3UTR CAA 90 bp | TGGGGTGCATGTCCCTGGGGTTGCAAATTGGGAGTTTCCCTGCCCACCTCGGGACCCACCACTTGCTCCTaGATCCTGACCGGGATGTGT | + |
|
Preference number: 5 (lower is better) Translates to: WGACPWGCKLGVSLPTSGPTTCS*ILTGMC Trigger: ACACATCCCGGTCAGGATCAAGGAGCAAGTGGTGGG...TCCCGAGGTGGGCAGGGAAACTCCCAATTTGCAACCCCAGGGACATGCACCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
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| CDS GCA 90 bp | CGGTTGAGTTTATCCAGAACTGGGCTGGCAAGGGTGAGATCCGGTTaGCCCTCTCCCGTGAGAGTCACTCCTGTTACTTCCCCTGCCACG | + |
|
Preference number: 5 (lower is better) Translates to: RLSLSRTGLARVRSG*PSPVRVTPVTSPAT Trigger: CGTGGCAGGGGAAGTAACAGGAGTGACTCTCACGGGAGAGGGGCAACCGGATCTCACCCTTGCCAGCCCAGTTCTGGATAAACTCAACCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006914.11 |
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| CDS-3UTR CAA 90 bp | GGGTGGGGTGCATGTCCCTGGGGTTGCAAATTGGGAGTTTCCCTGCCCACCTCGGGAAGGCTTCCTCCCTaGGATTCACAACTGCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GWGACPWGCKLGVSLPTSGRLPP*DSQLQL Trigger: CAACTGCAGTTGTGAATCCAAGGGAGGAAGCCTTCC...CGAGGTGGGCAGGGAAACTCCCAATTTGCAACCCCAGGGACATGCACCCCACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
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| CDS-3UTR CAA 90 bp | GTTGCAAATTGGGAGTTTCCCTGCCCACCTCGGGAGGTGAGAGTGTTTCCACTTGGGTACAGCCGGGGGTaGGGAGGGTGTCTTACGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VANWEFPCPPREVRVFPLGYSRG*GGCLTR Trigger: CCTCGTAAGACACCCTCCCAACCCCCGGCTGTACCC...AAGTGGAAACACTCTCACCTCCCGAGGTGGGCAGGGAAACTCCCAATTTGCAAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006914.11 |
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| CDS TCA 90 bp | ATGGTGGGTACAGCCGGGGGTTGGGAGGGTGTCTTACGAGGATGGTaGAGGCAACTTCATGTCCCTTGGTGGAGAACCGGACTGTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: MVGTAGGWEGVLRGW*RQLHVPWWRTGLCL Trigger: CAGACACAGTCCGGTTCTCCACCAAGGGACATGAAGTTGCCTTCACCATCCTCGTAAGACACCCTCCCAACCCCCGGCTGTACCCACCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006914.11 |
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| CDS CCA 90 bp | CCGCCCGAACCTGTCTCAGAAAGGGCAAGGGAAGGCTTCCTCCCTTaGATTCACAACTGCAGTTGTTCTGAGCCAGCAGCCCCACCACTT | + |
|
Preference number: 5 (lower is better) Translates to: PPEPVSERAREGFLP*IHNCSCSEPAAPPL Trigger: AAGTGGTGGGGCTGCTGGCTCAGAACAACTGCAGTTGTGAATCCAAGGGAGGAAGCCTTCCCTTGCCCTTTCTGAGACAGGTTCGGGCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
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| CDS CCA 90 bp | TCCCCTGCCACGTCCCAGGTGCCTAGAGAAGCACTCAGGTTCACCTaGTATATCTCCTGGACAGAAGCTTCCTGCAGACTTAGCCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SPATSQVPREALRFT*YISWTEASCRLSPG Trigger: GCCAGGGCTAAGTCTGCAGGAAGCTTCTGTCCAGGAGATATACCAGGTGAACCTGAGTGCTTCTCTAGGCACCTGGGACGTGGCAGGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006914.11 |
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| CDS CCA 90 bp | GCTGTAAGTCACCAGTTGCAGCTGCCGGTTGAGTTTATCCAGAACTaGGCTGGCAAGGGTGAGATCCGGTTGCCCCTCTCCCGTGAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: AVSHQLQLPVEFIQN*AGKGEIRLPLSRES Trigger: ACTCTCACGGGAGAGGGGCAACCGGATCTCACCCTTGCCAGCCCAGTTCTGGATAAACTCAACCGGCAGCTGCAACTGGTGACTTACAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006914.11 |
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| CDS-3UTR CAA 90 bp | TTCACCAGCCCCACAGAACTACAGTCACAGTGCTTTCTGTGGGGGTATGTGGGACAGCAGCCCCACCACTaGCTCCTTGATCCTGACCGG | + |
|
Preference number: 5 (lower is better) Translates to: FTSPTELQSQCFLWGYVGQQPHH*LLDPDR Trigger: CCGGTCAGGATCAAGGAGCAAGTGGTGGGGCTGCTG...TCCCACATACCCCCACAGAAAGCACTGTGACTGTAGTTCTGTGGGGCTGGTGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
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| CDS-3UTR CAA 90 bp | ACCGTGTGTTCACCAGCCCCACAGAACTACAGTCACAGTGCTTTCTGTGGGGGTCCAGGGACCGGCTCCTaGCAAGGAAGGCCTGGTATT | + |
|
Preference number: 5 (lower is better) Translates to: TVCSPAPQNYSHSAFCGGPGTGS*QGRPGI Trigger: AATACCAGGCCTTCCTTGCAAGGAGCCGGTCCCTGG...ACCCCCACAGAAAGCACTGTGACTGTAGTTCTGTGGGGCTGGTGAACACACGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
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| CDS-3UTR CAA 90 bp | TGTCCCTGGGGTTGCAAATTGGGAGTTTCCCTGCCCACCTCGGGAGGTGAGAGTGTATTTGGTGGTTACTaGGGACACCGCCAGGTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: CPWGCKLGVSLPTSGGESVFGGY*GHRQVP Trigger: CGGAACCTGGCGGTGTCCCAAGTAACCACCAAATAC...ACTCTCACCTCCCGAGGTGGGCAGGGAAACTCCCAATTTGCAACCCCAGGGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006914.11 |
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| CDS CCA 90 bp | GGCAACTTCATGTCCCTTGGTGGAGAACCGGACTGGTATATCTCCTaGACAGAAGCTTCCTGCAGACTTAGCCCTGGCACCAGGATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GNFMSLGGEPDWYIS*TEASCRLSPGTRML Trigger: GAGCATCCTGGTGCCAGGGCTAAGTCTGCAGGAAGCTTCTGTCCAGGAGATATACCAGTCCGGTTCTCCACCAAGGGACATGAAGTTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217678.2 |
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| CDS-3UTR CAA 90 bp | GGTAACGGGCATAAGTTTCAGCTCCTGGGTCTTTTGCTGTCCACGGCAGCTTCACCCACCACTTGCTCCTaGATCCTGACCGGGATGTGT | + |
|
Preference number: 5 (lower is better) Translates to: GNGHKFQLLGLLLSTAASPTTCS*ILTGMC Trigger: ACACATCCCGGTCAGGATCAAGGAGCAAGTGGTGGG...TGAAGCTGCCGTGGACAGCAAAAGACCCAGGAGCTGAAACTTATGCCCGTTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217678.2 |
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| CDS-3UTR CAA 90 bp | TGGCTTTCACCGTGTGTTCACCAGCCCCACAGAACTACAGTCACAGTGCTTTCTAAGGGTGAGATCCGGTaGCCCCTCTCCCGTGAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: WLSPCVHQPHRTTVTVLSKGEIR*PLSRES Trigger: ACTCTCACGGGAGAGGGGCAACCGGATCTCACCCTT...AGAAAGCACTGTGACTGTAGTTCTGTGGGGCTGGTGAACACACGGTGAAAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006914.11 |
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| CDS CCA 90 bp | GAGGATGGTGAAGGCAACTTCATGTCCCTTGGTGGAGAACCGGACTaGTATATCTCCTGGACAGAAGCTTCCTGCAGACTTAGCCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: EDGEGNFMSLGGEPD*YISWTEASCRLSPG Trigger: GCCAGGGCTAAGTCTGCAGGAAGCTTCTGTCCAGGAGATATACCAGTCCGGTTCTCCACCAAGGGACATGAAGTTGCCTTCACCATCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217678.2 |
||
| CDS-3UTR CAA 90 bp | TTAGGAATCAGATTGGTGGAGAGGATCGGGAAGCCAGGGTGTTCATCAGTGGGGGGAAGGCTTCCTCCCTaGGATTCACAACTGCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LGIRLVERIGKPGCSSVGGRLPP*DSQLQL Trigger: CAACTGCAGTTGTGAATCCAAGGGAGGAAGCCTTCC...CCCCACTGATGAACACCCTGGCTTCCCGATCCTCTCCACCAATCTGATTCCTAA 53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
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| CDS-3UTR CAA 90 bp | GTGTTCACCAGCCCCACAGAACTACAGTCACAGTGCTTTCTGTGGGGGTATGTGGCTGTAAGTCACCAGTaGCAGCTGCCGGTTGAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: VFTSPTELQSQCFLWGYVAVSHQ*QLPVEF Trigger: AAACTCAACCGGCAGCTGCAACTGGTGACTTACAGC...CACATACCCCCACAGAAAGCACTGTGACTGTAGTTCTGTGGGGCTGGTGAACAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006914.11 |
||
| CDS-3UTR CAA 90 bp | TGGCTTTCACCGTGTGTTCACCAGCCCCACAGAACTACAGTCACAGTGCTTTCTCTAATGCGCTCCGGTTaGTCACTGTCGTCAGCGATG | + |
|
Preference number: 5 (lower is better) Translates to: WLSPCVHQPHRTTVTVLSLMRSG*SLSSAM Trigger: CATCGCTGACGACAGTGACAAACCGGAGCGCATTAG...AGAAAGCACTGTGACTGTAGTTCTGTGGGGCTGGTGAACACACGGTGAAAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006914.11 |
||
| CDS-3UTR CAA 90 bp | GGAAGGGTGTCACCAGGACAAGCCCCTGTTAGGAATCAGATTGGTGGAGAGGATACCCACAGCACGTATTaGGTGGTTACTTGGGACACC | + |
|
Preference number: 5 (lower is better) Translates to: GRVSPGQAPVRNQIGGEDTHSTY*VVTWDT Trigger: GGTGTCCCAAGTAACCACCAAATACGTGCTGTGGGT...ATCCTCTCCACCAATCTGATTCCTAACAGGGGCTTGTCCTGGTGACACCCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006914.11 |
||
| CDS CAA 90 bp | GGGGACCTTGTGGGGGCGACCACAATGCCAGAGGGTTCGGGAGACTaGGCGCGTTTCGGGTGCTGGAGTACAGGAGACCCAGCGAGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: GDLVGATTMPEGSGD*ARFGCWSTGDPARR Trigger: GCGCCTCGCTGGGTCTCCTGTACTCCAGCACCCGAAACGCGCCAAGTCTCCCGAACCCTCTGGCATTGTGGTCGCCCCCACAAGGTCCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
||
| CDS CCA 72 bp | CCAGAGGGTTCGGGAGACTTGGCGCGTTTCGGGTGCTaGAGTACAGGAGACCCAGCGAGGCGCAGGCGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: PEGSGDLARFGC*STGDPARRRRA Trigger: TGCTCGCCTGCGCCTCGCTGGGTCTCCTGTACTCCAGCACCCGAAACGCGCCAAGTCTCCCGAACCCTCTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
||
| CDS GCA 72 bp | ATGCCAGAGGGTTCGGGAGACTTGGCGCGTTTCGGGTaGTGGAGTACAGGAGACCCAGCGAGGCGCAGGCGA | + |
|
Preference number: 6 (lower is better) Translates to: MPEGSGDLARFG*WSTGDPARRRR Trigger: TCGCCTGCGCCTCGCTGGGTCTCCTGTACTCCAGCACCCGAAACGCGCCAAGTCTCCCGAACCCTCTGGCAT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
||
| CDS CCA 72 bp | TGGTCAGCCAGGGACCGGCTCCTTGCAAGGAAGGCCTaGTATTCCTGCTCCCTGGCGACAGAAACAGCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: WSARDRLLARKA*YSCSLATETAL Trigger: GAGGGCTGTTTCTGTCGCCAGGGAGCAGGAATACCAGGCCTTCCTTGCAAGGAGCCGGTCCCTGGCTGACCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
||
| CDS CCA 72 bp | TACTGTAAGGGGGAGTTGGCGGGAGCTATCAGCAGCTaGTCAGCCAGGGACCGGCTCCTTGCAAGGAAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: YCKGELAGAISS*SARDRLLARKA Trigger: GGCCTTCCTTGCAAGGAGCCGGTCCCTGGCTGACCAGCTGCTGATAGCTCCCGCCAACTCCCCCTTACAGTA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
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| CDS CCA 72 bp | GGCTCCTTGCAAGGAAGGCCTGGTATTCCTGCTCCCTaGCGACAGAAACAGCCCTCAGCTCCTCAGCGTCAA | + |
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Preference number: 6 (lower is better) Translates to: GSLQGRPGIPAP*RQKQPSAPQRQ Trigger: TTGACGCTGAGGAGCTGAGGGCTGTTTCTGTCGCCAGGGAGCAGGAATACCAGGCCTTCCTTGCAAGGAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
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| CDS CAA 90 bp | CCGGTTGAGTTTATCCAGAACTGGGCTGGCAAGGGTGAGATCCGGTaGCCCCTCTCCCGTGAGAGTCACTCCTGTTACTTCCCCTGCCAC | + |
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Preference number: 6 (lower is better) Translates to: PVEFIQNWAGKGEIR*PLSRESHSCYFPCH Trigger: GTGGCAGGGGAAGTAACAGGAGTGACTCTCACGGGAGAGGGGCAACCGGATCTCACCCTTGCCAGCCCAGTTCTGGATAAACTCAACCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006914.11 |
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| CDS CAA 90 bp | GTCTGCTGTGTTGGCCTGGTAGCTCCGGCTGCTGTAAGTCACCAGTaGCAGCTGCCGGTTGAGTTTATCCAGAACTGGGCTGGCAAGGGT | + |
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Preference number: 6 (lower is better) Translates to: VCCVGLVAPAAVSHQ*QLPVEFIQNWAGKG Trigger: ACCCTTGCCAGCCCAGTTCTGGATAAACTCAACCGGCAGCTGCAACTGGTGACTTACAGCAGCCGGAGCTACCAGGCCAACACAGCAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006914.11 |
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| CDS TCA 72 bp | ACAGCCGGGGGTTGGGAGGGTGTCTTACGAGGATGGTaGAGGCAACTTCATGTCCCTTGGTGGAGAACCGGA | + |
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Preference number: 6 (lower is better) Translates to: TAGGWEGVLRGW*RQLHVPWWRTG Trigger: TCCGGTTCTCCACCAAGGGACATGAAGTTGCCTTCACCATCCTCGTAAGACACCCTCCCAACCCCCGGCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006914.11 |
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| CDS CCA 72 bp | GTCCCTTGGTGGAGAACCGGACTGTGTCTGCTGTGTTaGCCTGGTAGCTCCGGCTGCTGTAAGTCACCAGTT | + |
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Preference number: 6 (lower is better) Translates to: VPWWRTGLCLLC*PGSSGCCKSPV Trigger: AACTGGTGACTTACAGCAGCCGGAGCTACCAGGCCAACACAGCAGACACAGTCCGGTTCTCCACCAAGGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006914.11 |
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| CDS GCA 72 bp | AGGGCAAGGGAAGGCTTCCTCCCTTGGATTCACAACTaGAGTTGTTCTGAGCCAGCAGCCCCACCACTTGCT | + |
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Preference number: 6 (lower is better) Translates to: RAREGFLPWIHN*SCSEPAAPPLA Trigger: AGCAAGTGGTGGGGCTGCTGGCTCAGAACAACTGCAGTTGTGAATCCAAGGGAGGAAGCCTTCCCTTGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
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| CDS GCA 72 bp | TTATCCAGAACTGGGCTGGCAAGGGTGAGATCCGGTTaGCCCTCTCCCGTGAGAGTCACTCCTGTTACTTCC | + |
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Preference number: 6 (lower is better) Translates to: LSRTGLARVRSG*PSPVRVTPVTS Trigger: GGAAGTAACAGGAGTGACTCTCACGGGAGAGGGGCAACCGGATCTCACCCTTGCCAGCCCAGTTCTGGATAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006914.11 |
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| CDS GCA 72 bp | GAACCGGACTGGTATATCTCCTGGACAGAAGCTTCCTaGAGACTTAGCCCTGGCACCAGGATGCTCCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: EPDWYISWTEAS*RLSPGTRMLLR Trigger: CCTCAGGAGCATCCTGGTGCCAGGGCTAAGTCTGCAGGAAGCTTCTGTCCAGGAGATATACCAGTCCGGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217678.2 |
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| CDS CAA 72 bp | GTTGGCCTGGTAGCTCCGGCTGCTGTAAGTCACCAGTaGCAGCTGCCGGTTGAGTTTATCCAGAACTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: VGLVAPAAVSHQ*QLPVEFIQNWA Trigger: AGCCCAGTTCTGGATAAACTCAACCGGCAGCTGCAACTGGTGACTTACAGCAGCCGGAGCTACCAGGCCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006914.11 |
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| CDS TCA 72 bp | AGGCTTCCTCCCTTGGATTCACAACTGCAGTTGTTCTaGGCCAGCAGCCCCACCACTTGCTCCTTGATCCTG | + |
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Preference number: 6 (lower is better) Translates to: RLPPLDSQLQLF*ASSPTTCSLIL Trigger: CAGGATCAAGGAGCAAGTGGTGGGGCTGCTGGCTCAGAACAACTGCAGTTGTGAATCCAAGGGAGGAAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006914.11 ENSMUST00000217678.2 |
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| CDS GCA 72 bp | AGGTTCACCTGGTATATCTCCTGGACAGAAGCTTCCTaGAGACTTAGCCCTGGCACCAGGATGCTCCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: RFTWYISWTEAS*RLSPGTRMLLR Trigger: CCTCAGGAGCATCCTGGTGCCAGGGCTAAGTCTGCAGGAAGCTTCTGTCCAGGAGATATACCAGGTGAACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006914.11 |
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| CDS CCA 72 bp | ATGTCCCTTGGTGGAGAACCGGACTGGTATATCTCCTaGACAGAAGCTTCCTGCAGACTTAGCCCTGGCACC | + |
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Preference number: 6 (lower is better) Translates to: MSLGGEPDWYIS*TEASCRLSPGT Trigger: GGTGCCAGGGCTAAGTCTGCAGGAAGCTTCTGTCCAGGAGATATACCAGTCCGGTTCTCCACCAAGGGACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217678.2 |
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| CDS GCA 72 bp | GAGTCACTCCTGTTACTTCCCCTGCCACGTCCCAGGTaGCTAGAGAAGCACTCAGGTTCACCTGGTATATCT | + |
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Preference number: 6 (lower is better) Translates to: ESLLLLPLPRPR*LEKHSGSPGIS Trigger: AGATATACCAGGTGAACCTGAGTGCTTCTCTAGGCACCTGGGACGTGGCAGGGGAAGTAACAGGAGTGACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006914.11 |
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| CDS CCA 72 bp | CCTAGAGAAGCACTCAGGTTCACCTGGTATATCTCCTaGACAGAAGCTTCCTGCAGACTTAGCCCTGGCACC | + |
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Preference number: 6 (lower is better) Translates to: PREALRFTWYIS*TEASCRLSPGT Trigger: GGTGCCAGGGCTAAGTCTGCAGGAAGCTTCTGTCCAGGAGATATACCAGGTGAACCTGAGTGCTTCTCTAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006914.11 |
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| CDS CCA 72 bp | ACGTCCCAGGTGCCTAGAGAAGCACTCAGGTTCACCTaGTATATCTCCTGGACAGAAGCTTCCTGCAGACTT | + |
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Preference number: 6 (lower is better) Translates to: TSQVPREALRFT*YISWTEASCRL Trigger: AAGTCTGCAGGAAGCTTCTGTCCAGGAGATATACCAGGTGAACCTGAGTGCTTCTCTAGGCACCTGGGACGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006914.11 |
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| CDS CCA 72 bp | GAAGGCAACTTCATGTCCCTTGGTGGAGAACCGGACTaGTATATCTCCTGGACAGAAGCTTCCTGCAGACTT | + |
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Preference number: 6 (lower is better) Translates to: EGNFMSLGGEPD*YISWTEASCRL Trigger: AAGTCTGCAGGAAGCTTCTGTCCAGGAGATATACCAGTCCGGTTCTCCACCAAGGGACATGAAGTTGCCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217678.2 |
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