Pregenerated sensors for B3GNTL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046605Ensembl transcript IDs: ENSMUST00000062654.8, ENSMUST00000067399.14
Found 152 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCACTTTCCAGGCCTGGGTCTGCAGGTTTGCTGTGCTGCCCTGGTaGCAGGGACTTCTAGGGGCCTGCGGCCTGGTTCACACTTCATTC | + |
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Preference number: 1 (lower is better) Translates to: ATFQAWVCRFAVLPW*QGLLGACGLVHTSF Trigger: GAATGAAGTGTGAACCAGGCCGCAGGCCCCTAGAAGTCCCTGCCACCAGGGCAGCACAGCAAACCTGCAGACCCAGGCCTGGAAAGTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| 3UTR CCA 90 bp | CAGCCCAGCCTCTGCCTATCTCTGGGACGTCCGTGCACAAGGAGCTaGAGGATCTGCTGTGGCTCTCTCCCCTTCAGTGCTTTGCTGTGT | + |
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Preference number: 1 (lower is better) Translates to: QPSLCLSLGRPCTRS*RICCGSLPFSALLC Trigger: ACACAGCAAAGCACTGAAGGGGAGAGAGCCACAGCAGATCCTCCAGCTCCTTGTGCACGGACGTCCCAGAGATAGGCAGAGGCTGGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| 3UTR TCA 90 bp | CGCTTCACCAGCCAGCAGAATTGGCATCCAGAAACAGCTGCAGTGTaGTGCCCAGACAGCTGCCACGGGGCTATGTCACACACTCCACCT | + |
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Preference number: 1 (lower is better) Translates to: RFTSQQNWHPETAAV*CPDSCHGAMSHTPP Trigger: AGGTGGAGTGTGTGACATAGCCCCGTGGCAGCTGTCTGGGCATCACACTGCAGCTGTTTCTGGATGCCAATTCTGCTGGCTGGTGAAGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062654.8 |
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| 3UTR GCA 90 bp | TGTCCAGCGCTTCACCAGCCAGCAGAATTGGCATCCAGAAACAGCTaGAGTGTGATGCCCAGACAGCTGCCACGGGGCTATGTCACACAC | + |
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Preference number: 1 (lower is better) Translates to: CPALHQPAELASRNS*SVMPRQLPRGYVTH Trigger: GTGTGTGACATAGCCCCGTGGCAGCTGTCTGGGCATCACACTGCAGCTGTTTCTGGATGCCAATTCTGCTGGCTGGTGAAGCGCTGGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062654.8 |
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| 3UTR TCA 90 bp | CCCACGTGCTCGGCCAGCCAAGACACCAACAATGCTACAACAGTCTaGGAGATCATCAGAAGCCAGCATCCCTGTGGGCATATGAATGGC | + |
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Preference number: 1 (lower is better) Translates to: PTCSASQDTNNATTV*EIIRSQHPCGHMNG Trigger: GCCATTCATATGCCCACAGGGATGCTGGCTTCTGATGATCTCTCAGACTGTTGTAGCATTGTTGGTGTCTTGGCTGGCCGAGCACGTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| 3UTR CCA 90 bp | CAATGCTACAACAGTCTGAGAGATCATCAGAAGCCAGCATCCCTGTaGGCATATGAATGGCACCTCTGGTCCCAGGGCCTGCATGCCTAC | + |
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Preference number: 1 (lower is better) Translates to: QCYNSLRDHQKPASL*AYEWHLWSQGLHAY Trigger: GTAGGCATGCAGGCCCTGGGACCAGAGGTGCCATTCATATGCCCACAGGGATGCTGGCTTCTGATGATCTCTCAGACTGTTGTAGCATTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| 3UTR TCA 90 bp | TCACACACCAGCATGGGAAGGACCTCCCTTACACACATGGCCACATaGTGTGATCTCCAGGCATCTCACGCTCGCACAACCTACAAAACC | + |
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Preference number: 1 (lower is better) Translates to: SHTSMGRTSLTHMAT*CDLQASHARTTYKT Trigger: GGTTTTGTAGGTTGTGCGAGCGTGAGATGCCTGGAGATCACATCATGTGGCCATGTGTGTAAGGGAGGTCCTTCCCATGCTGGTGTGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062654.8 |
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| 3UTR TCA 90 bp | CTGGGGCCAGCACTCTTTCTTGACACATTACGTTATCCCTGGCCATaGCCTCCAGCTGCAGAGCCCTGTCTGAAACTGGCTTGTTCTAAC | + |
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Preference number: 1 (lower is better) Translates to: LGPALFLDTLRYPWP*PPAAEPCLKLACSN Trigger: GTTAGAACAAGCCAGTTTCAGACAGGGCTCTGCAGCTGGAGGTCATGGCCAGGGATAACGTAATGTGTCAAGAAAGAGTGCTGGCCCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| 3UTR TCA 90 bp | CCTGCTGTGGGAGTCCCATGTCTGCCTCCTCTGCCTCTTTGTATCTaGTGCCTGAGGCTCATTAAGCTGTTGCAGATGGGCAGAATTCAA | + |
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Preference number: 1 (lower is better) Translates to: PAVGVPCLPPLPLCI*CLRLIKLLQMGRIQ Trigger: TTGAATTCTGCCCATCTGCAACAGCTTAATGAGCCTCAGGCATCAGATACAAAGAGGCAGAGGAGGCAGACATGGGACTCCCACAGCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| 3UTR TCA 90 bp | CATTACGTTATCCCTGGCCATGACCTCCAGCTGCAGAGCCCTGTCTaGAACTGGCTTGTTCTAACCCTGAGGTCTTGGAATTTAGCAGGC | + |
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Preference number: 1 (lower is better) Translates to: HYVIPGHDLQLQSPV*NWLVLTLRSWNLAG Trigger: GCCTGCTAAATTCCAAGACCTCAGGGTTAGAACAAGCCAGTTTCAGACAGGGCTCTGCAGCTGGAGGTCATGGCCAGGGATAACGTAATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| 3UTR CCA 90 bp | CATTCCAGTCTCAAACACCTCTTTCCTAAGCTCAGCATTTTCTCTTaGGAGCAGAAGAAAGCCTGGCTGAGATCAGCTGACGAGGCCATG | + |
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Preference number: 1 (lower is better) Translates to: HSSLKHLFPKLSIFS*EQKKAWLRSADEAM Trigger: CATGGCCTCGTCAGCTGATCTCAGCCAGGCTTTCTTCTGCTCCCAAGAGAAAATGCTGAGCTTAGGAAAGAGGTGTTTGAGACTGGAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| 3UTR TCA 90 bp | GTCTCACTGGTCAGCTTCTTAACTTGCTCTTGTCAGCTCTGTGCCTaGGCTCCTGTCATGTCTGTGTCATGTTGTAAGAGGTTTTGTTTT | + |
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Preference number: 1 (lower is better) Translates to: VSLVSFLTCSCQLCA*APVMSVSCCKRFCF Trigger: AAAACAAAACCTCTTACAACATGACACAGACATGACAGGAGCTCAGGCACAGAGCTGACAAGAGCAAGTTAAGAAGCTGACCAGTGAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| 3UTR CCA 90 bp | CCAACTCAGAAACTTACATTAGATCACTTATTTTTGTGCTGTGGGTaGCAAAGCTTACTGTGCAAACACAAAGGAGTGAGCTCTGTACAC | + |
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Preference number: 1 (lower is better) Translates to: PTQKLTLDHLFLCCG*QSLLCKHKGVSSVH Trigger: GTGTACAGAGCTCACTCCTTTGTGTTTGCACAGTAAGCTTTGCCACCCACAGCACAAAAATAAGTGATCTAATGTAAGTTTCTGAGTTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062654.8 |
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| 3UTR-3UTR TCA 90 bp | CCCAGGGCCTGCATGCCTACCTGTCCTGCTGTGGGAGTCCCATGTCTGCCTCCTGGTAACAGCTCACAGTaGAGTGGCCAGGGCCTCAAG | + |
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Preference number: 2 (lower is better) Translates to: PRACMPTCPAVGVPCLPPGNSSQ*SGQGLK Trigger: CTTGAGGCCCTGGCCACTTCACTGTGAGCTGTTACC...AGGAGGCAGACATGGGACTCCCACAGCAGGACAGGTAGGCATGCAGGCCCTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| 3UTR-3UTR GCA 90 bp | GAATGGCACCTCTGGTCCCAGGGCCTGCATGCCTACCTGTCCTGCTGTGGGAGTGCAGGTTTGCTGTGCTaGCCTGGTGGCAGGGACTTC | + |
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Preference number: 2 (lower is better) Translates to: EWHLWSQGLHAYLSCCGSAGLLC*PGGRDF Trigger: GAAGTCCCTGCCACCAGGGCAGCACAGCAAACCTGC...ACTCCCACAGCAGGACAGGTAGGCATGCAGGCCCTGGGACCAGAGGTGCCATTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| 3UTR-3UTR CCA 90 bp | GTCCCAGGGCCTGCATGCCTACCTGTCCTGCTGTGGGAGTCCCATGTCTGCCTCGAGCAGAAGAAAGCCTaGCTGAGATCAGCTGACGAG | + |
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Preference number: 2 (lower is better) Translates to: VPGPACLPVLLWESHVCLEQKKA*LRSADE Trigger: CTCGTCAGCTGATCTCAGCCAGGCTTTCTTCTGCTC...GAGGCAGACATGGGACTCCCACAGCAGGACAGGTAGGCATGCAGGCCCTGGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| 3UTR-3UTR TCA 90 bp | AAAGCACACAGGCTGCTGCCTTTACTGGGAGCCACTTTCCAGGCCTGGGTCTGCAGAAGAAAGCCTGGCTaGGATCAGCTGACGAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: KAHRLLPLLGATFQAWVCRRKPG*DQLTRP Trigger: TGGCCTCGTCAGCTGATCTCAGCCAGGCTTTCTTCT...GCAGACCCAGGCCTGGAAAGTGGCTCCCAGTAAAGGCAGCAGCCTGTGTGCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| 3UTR-3UTR TCA 90 bp | TGTCTCTTTACAGCCTATTCCAGGAAGCTGAGCCTTGCCTACCTAGCTGGGATGGCTGGGCAGATGAAGTaGCAGGCAGCTCCCACGTGC | + |
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Preference number: 2 (lower is better) Translates to: CLFTAYSRKLSLAYLAGMAGQMK*QAAPTC Trigger: GCACGTGGGAGCTGCCTGTCACTTCATCTGCCCAGC...CATCCCAGCTAGGTAGGCAAGGCTCAGCTTCCTGGAATAGGCTGTAAAGAGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| 3UTR-3UTR CCA 90 bp | ACTGGGAGCCACTTTCCAGGCCTGGGTCTGCAGGTTTGCTGTGCTGCCCTGGTGCTCAGCATTTTCTCTTaGGAGCAGAAGAAAGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: TGSHFPGLGLQVCCAALVLSIFS*EQKKAW Trigger: CCAGGCTTTCTTCTGCTCCCAAGAGAAAATGCTGAG...CACCAGGGCAGCACAGCAAACCTGCAGACCCAGGCCTGGAAAGTGGCTCCCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| 3UTR-3UTR GCA 90 bp | CACATTACGTTATCCCTGGCCATGACCTCCAGCTGCAGAGCCCTGTCTGAAACTGGACTTCTAGGGGCCTaGGGCCTGGTTCACACTTCA | + |
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Preference number: 2 (lower is better) Translates to: HITLSLAMTSSCRALSETGLLGA*GLVHTS Trigger: TGAAGTGTGAACCAGGCCGCAGGCCCCTAGAAGTCC...AGTTTCAGACAGGGCTCTGCAGCTGGAGGTCATGGCCAGGGATAACGTAATGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| 3UTR-3UTR TCA 90 bp | CTTGTCAGCTCTGTGCCTGAGCTCCTGTCATGTCTGTGTCATGTTGTAAGAGGTGAAGTGCTGGGCAGATaGAGTGACAGGCAGCTCCCA | + |
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Preference number: 2 (lower is better) Translates to: LVSSVPELLSCLCHVVRGEVLGR*SDRQLP Trigger: TGGGAGCTGCCTGTCACTTCATCTGCCCAGCACTTC...ACCTCTTACAACATGACACAGACATGACAGGAGCTCAGGCACAGAGCTGACAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| 3UTR-3UTR CCA 90 bp | CCTCCCTTACACACATGGCCACATGATGTGATCTCCAGGCATCTCACGCTCGCAACCAGCCAGCAGAATTaGCATCCAGAAACAGCTGCA | + |
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Preference number: 2 (lower is better) Translates to: PPLHTWPHDVISRHLTLATSQQN*HPETAA Trigger: TGCAGCTGTTTCTGGATGCCAATTCTGCTGGCTGGT...TGCGAGCGTGAGATGCCTGGAGATCACATCATGTGGCCATGTGTGTAAGGGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062654.8 |
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| 3UTR-3UTR CCA 90 bp | TGGCTTGTTCTAACCCTGAGGTCTTGGAATTTAGCAGGCATGGTCTCACTGGTCTTTGCTGTGCTGCCCTaGTGGCAGGGACTTCTAGGG | + |
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Preference number: 2 (lower is better) Translates to: WLVLTLRSWNLAGMVSLVFAVLP*WQGLLG Trigger: CCCTAGAAGTCCCTGCCACCAGGGCAGCACAGCAAA...GACCAGTGAGACCATGCCTGCTAAATTCCAAGACCTCAGGGTTAGAACAAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| 3UTR-3UTR CCA 90 bp | TGGCTTGTTCTAACCCTGAGGTCTTGGAATTTAGCAGGCATGGTCTCACTGGTCTATGAATGGCACCTCTaGTCCCAGGGCCTGCATGCC | + |
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Preference number: 2 (lower is better) Translates to: WLVLTLRSWNLAGMVSLVYEWHL*SQGLHA Trigger: GGCATGCAGGCCCTGGGACCAGAGGTGCCATTCATA...GACCAGTGAGACCATGCCTGCTAAATTCCAAGACCTCAGGGTTAGAACAAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| 3UTR-3UTR GCA 90 bp | CCCATACGTTTGCTGTCACAGACGTGCTTCTCATTAAATCATGTATCACACAGCGTCCCAGGGCCTGCATaGCTACCTGTCCTGCTGTGG | + |
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Preference number: 2 (lower is better) Translates to: PIRLLSQTCFSLNHVSHSVPGPA*LPVLLW Trigger: CCACAGCAGGACAGGTAGGCATGCAGGCCCTGGGAC...GCTGTGTGATACATGATTTAATGAGAAGCACGTCTGTGACAGCAAACGTATGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| 3UTR-3UTR GCA 90 bp | CACATTACGTTATCCCTGGCCATGACCTCCAGCTGCAGAGCCCTGTCTGAAACTTTTTTCCTCTCTGTGTaGCCAAGTCTTCCCAGGGCT | + |
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Preference number: 2 (lower is better) Translates to: HITLSLAMTSSCRALSETFFLSV*PSLPRA Trigger: AGCCCTGGGAAGACTTGGGCACACAGAGAGGAAAAA...AGTTTCAGACAGGGCTCTGCAGCTGGAGGTCATGGCCAGGGATAACGTAATGTG 52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| 3UTR-3UTR GCA 90 bp | ACTCTCAAGCAAGCCTCAGGTTGTAATTACAGCTTTTATCCTGGGAGGTGCCGCGCATCCAGAAACAGCTaGAGTGTGATGCCCAGACAG | + |
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Preference number: 2 (lower is better) Translates to: TLKQASGCNYSFYPGRCRASRNS*SVMPRQ Trigger: CTGTCTGGGCATCACACTGCAGCTGTTTCTGGATGC...GCGGCACCTCCCAGGATAAAAGCTGTAATTACAACCTGAGGCTTGCTTGAGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062654.8 |
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| 3UTR-3UTR GCA 90 bp | AACTTGCTCTTGTCAGCTCTGTGCCTGAGCTCCTGTCATGTCTGTGTCATGTTGTGGGAGTCCCATGTCTaGCTCCTCTGCCTCTTTGTA | + |
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Preference number: 2 (lower is better) Translates to: NLLLSALCLSSCHVCVMLWESHV*LLCLFV Trigger: TACAAAGAGGCAGAGGAGGCAGACATGGGACTCCCA...CAACATGACACAGACATGACAGGAGCTCAGGCACAGAGCTGACAAGAGCAAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| 3UTR-3UTR GCA 90 bp | CACATTACGTTATCCCTGGCCATGACCTCCAGCTGCAGAGCCCTGTCTGAAACTGTCAGCTTCTTAACTTaGTCTTGTCAGCTCTGTGCC | + |
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Preference number: 2 (lower is better) Translates to: HITLSLAMTSSCRALSETVSFLT*SCQLCA Trigger: GGCACAGAGCTGACAAGAGCAAGTTAAGAAGCTGAC...AGTTTCAGACAGGGCTCTGCAGCTGGAGGTCATGGCCAGGGATAACGTAATGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| 3UTR CAA 90 bp | TTTAGCCATCTATCAAGAGAGGGTGAGGTAGCAACCAGCCTGATGTaGCCATGTCTCTTTACAGCCTATTCCAGGAAGCTGAGCCTTGCC | + |
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Preference number: 2 (lower is better) Translates to: FSHLSREGEVATSLM*PCLFTAYSRKLSLA Trigger: GGCAAGGCTCAGCTTCCTGGAATAGGCTGTAAAGAGACATGGCAACATCAGGCTGGTTGCTACCTCACCCTCTCTTGATAGATGGCTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| 3UTR CAA 90 bp | GTCTTGGAATTTAGCAGGCATGGTCTCACTGGTCAGCTTCTTAACTaGCTCTTGTCAGCTCTGTGCCTGAGCTCCTGTCATGTCTGTGTC | + |
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Preference number: 2 (lower is better) Translates to: VLEFSRHGLTGQLLN*LLSALCLSSCHVCV Trigger: GACACAGACATGACAGGAGCTCAGGCACAGAGCTGACAAGAGCAAGTTAAGAAGCTGACCAGTGAGACCATGCCTGCTAAATTCCAAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| 3UTR-3UTR GCA 90 bp | TGTCTCTTTACAGCCTATTCCAGGAAGCTGAGCCTTGCCTACCTAGCTGGGATGTGGTGTAGTCTGAAGTaGTGGGCAGATGAAGTGACA | + |
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Preference number: 2 (lower is better) Translates to: CLFTAYSRKLSLAYLAGMWCSLK*WADEVT Trigger: TGTCACTTCATCTGCCCAGCACTTCAGACTACACCA...CATCCCAGCTAGGTAGGCAAGGCTCAGCTTCCTGGAATAGGCTGTAAAGAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| 3UTR-3UTR CCA 90 bp | TACCATCATGGAAACTTGGTGCCACAGACATCTGAGGAAGGTAGCACCTTCATTGGGCGTTTCAGACCCTaGTGTAGTCTGAAGTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: YHHGNLVPQTSEEGSTFIGRFRP*CSLKCW Trigger: CCAGCACTTCAGACTACACCAGGGTCTGAAACGCCC...AATGAAGGTGCTACCTTCCTCAGATGTCTGTGGCACCAAGTTTCCATGATGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| 3UTR CAA 90 bp | GAATTTAGCAGGCATGGTCTCACTGGTCAGCTTCTTAACTTGCTCTaGTCAGCTCTGTGCCTGAGCTCCTGTCATGTCTGTGTCATGTTG | + |
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Preference number: 2 (lower is better) Translates to: EFSRHGLTGQLLNLL*SALCLSSCHVCVML Trigger: CAACATGACACAGACATGACAGGAGCTCAGGCACAGAGCTGACAAGAGCAAGTTAAGAAGCTGACCAGTGAGACCATGCCTGCTAAATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| 3UTR-3UTR TCA 90 bp | CTTGTCAGCTCTGTGCCTGAGCTCCTGTCATGTCTGTGTCATGTTGTAAGAGGTGTCCCTTATGCAAGGTaGACTCTGCCCTTTACATTG | + |
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Preference number: 2 (lower is better) Translates to: LVSSVPELLSCLCHVVRGVPYAR*TLPFTL Trigger: CAATGTAAAGGGCAGAGTTCACCTTGCATAAGGGAC...ACCTCTTACAACATGACACAGACATGACAGGAGCTCAGGCACAGAGCTGACAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| 3UTR-3UTR GCA 90 bp | AACTTGCTCTTGTCAGCTCTGTGCCTGAGCTCCTGTCATGTCTGTGTCATGTTGCCAAGACACCAACAATaGTACAACAGTCTGAGAGAT | + |
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Preference number: 2 (lower is better) Translates to: NLLLSALCLSSCHVCVMLPRHQQ*YNSLRD Trigger: ATCTCTCAGACTGTTGTAGCATTGTTGGTGTCTTGG...CAACATGACACAGACATGACAGGAGCTCAGGCACAGAGCTGACAAGAGCAAGTT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| 3UTR-3UTR GCA 90 bp | TTATTAATGTACTCTGACAAGGCCACAGAGCTATTACTACACAATTCAAGCTGCTCTCTGGGACGTCCGTaGACAAGGAGCTGGAGGATC | + |
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Preference number: 2 (lower is better) Translates to: LLMYSDKATELLLHNSSCSLGRP*TRSWRI Trigger: GATCCTCCAGCTCCTTGTGCACGGACGTCCCAGAGA...GCAGCTTGAATTGTGTAGTAATAGCTCTGTGGCCTTGTCAGAGTACATTAATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| 3UTR-3UTR CCA 90 bp | ACTCTCAAGCAAGCCTCAGGTTGTAATTACAGCTTTTATCCTGGGAGGTGCCGCTTTTTGTGCTGTGGGTaGCAAAGCTTACTGTGCAAA | + |
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Preference number: 2 (lower is better) Translates to: TLKQASGCNYSFYPGRCRFLCCG*QSLLCK Trigger: TTTGCACAGTAAGCTTTGCCACCCACAGCACAAAAA...GCGGCACCTCCCAGGATAAAAGCTGTAATTACAACCTGAGGCTTGCTTGAGAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062654.8 |
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| 3UTR-3UTR TCA 90 bp | CAAATTCAACTCTCAAGCAAGCCTCAGGTTGTAATTACAGCTTTTATCCTGGGAGCAAACACAAAGGAGTaGGCTCTGTACACACGGGCT | + |
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Preference number: 2 (lower is better) Translates to: QIQLSSKPQVVITAFILGANTKE*ALYTRA Trigger: AGCCCGTGTGTACAGAGCTCACTCCTTTGTGTTTGC...TCCCAGGATAAAAGCTGTAATTACAACCTGAGGCTTGCTTGAGAGTTGAATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062654.8 |
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| 3UTR CAA 90 bp | TGTTTCTTTCCCCCTTATCTGAATTTCATTTCCTACCCTGTTAACTaGTTTCACAGCTCTGTTCTTCTGTCCCTGATTACCCTGGGGCCA | + |
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Preference number: 2 (lower is better) Translates to: CFFPPYLNFISYPVN*FHSSVLLSLITLGP Trigger: TGGCCCCAGGGTAATCAGGGACAGAAGAACAGAGCTGTGAAACAAGTTAACAGGGTAGGAAATGAAATTCAGATAAGGGGGAAAGAAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| 3UTR-3UTR TCA 90 bp | TGCCGCAGCCCACAGCGTAAAGACTTTAATCCAACTCAGAAACTTACATTAGATCAACCTACAAAACCATaGTGTAAGATCAATGTCCAG | + |
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Preference number: 2 (lower is better) Translates to: CRSPQRKDFNPTQKLTLDQPTKP*CKINVQ Trigger: CTGGACATTGATCTTACATCATGGTTTTGTAGGTTG...ATCTAATGTAAGTTTCTGAGTTGGATTAAAGTCTTTACGCTGTGGGCTGCGGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062654.8 |
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| 3UTR CAA 90 bp | AAAGACTTTAATCCAACTCAGAAACTTACATTAGATCACTTATTTTaGTGCTGTGGGTGGCAAAGCTTACTGTGCAAACACAAAGGAGTG | + |
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Preference number: 2 (lower is better) Translates to: KDFNPTQKLTLDHLF*CCGWQSLLCKHKGV Trigger: CACTCCTTTGTGTTTGCACAGTAAGCTTTGCCACCCACAGCACAAAAATAAGTGATCTAATGTAAGTTTCTGAGTTGGATTAAAGTCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062654.8 |
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| 3UTR CCA 72 bp | CAGGCCTGGGTCTGCAGGTTTGCTGTGCTGCCCTGGTaGCAGGGACTTCTAGGGGCCTGCGGCCTGGTTCAC | + |
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Preference number: 3 (lower is better) Translates to: QAWVCRFAVLPW*QGLLGACGLVH Trigger: GTGAACCAGGCCGCAGGCCCCTAGAAGTCCCTGCCACCAGGGCAGCACAGCAAACCTGCAGACCCAGGCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| 3UTR GCA 72 bp | ACTGGGAGCCACTTTCCAGGCCTGGGTCTGCAGGTTTaGTGTGCTGCCCTGGTGGCAGGGACTTCTAGGGGC | + |
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Preference number: 3 (lower is better) Translates to: TGSHFPGLGLQV*CAALVAGTSRG Trigger: GCCCCTAGAAGTCCCTGCCACCAGGGCAGCACAGCAAACCTGCAGACCCAGGCCTGGAAAGTGGCTCCCAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| 3UTR CCA 72 bp | AGGCTGCTGCCTTTACTGGGAGCCACTTTCCAGGCCTaGGTCTGCAGGTTTGCTGTGCTGCCCTGGTGGCAG | + |
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Preference number: 3 (lower is better) Translates to: RLLPLLGATFQA*VCRFAVLPWWQ Trigger: CTGCCACCAGGGCAGCACAGCAAACCTGCAGACCCAGGCCTGGAAAGTGGCTCCCAGTAAAGGCAGCAGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| 3UTR CCA 72 bp | CTGGTCCCAGGGCCTGCATGCCTACCTGTCCTGCTGTaGGAGTCCCATGTCTGCCTCCTCTGCCTCTTTGTA | + |
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Preference number: 3 (lower is better) Translates to: LVPGPACLPVLL*ESHVCLLCLFV Trigger: TACAAAGAGGCAGAGGAGGCAGACATGGGACTCCCACAGCAGGACAGGTAGGCATGCAGGCCCTGGGACCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| 3UTR GCA 72 bp | GCTGTGCTGCCCTGGTGGCAGGGACTTCTAGGGGCCTaGGGCCTGGTTCACACTTCATTCCAGTCTCAAACA | + |
|
Preference number: 3 (lower is better) Translates to: AVLPWWQGLLGA*GLVHTSFQSQT Trigger: TGTTTGAGACTGGAATGAAGTGTGAACCAGGCCGCAGGCCCCTAGAAGTCCCTGCCACCAGGGCAGCACAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
||
| 3UTR CCA 72 bp | CGGGCTGCTCTACTAAGAGACATGATGGGTGCCACCTaGGTGGGCTACAAGTCACCACCCAGGTGGCTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: RAALLRDMMGAT*VGYKSPPRWLE Trigger: CTCAAGCCACCTGGGTGGTGACTTGTAGCCCACCCAGGTGGCACCCATCATGTCTCTTAGTAGAGCAGCCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062654.8 |
||
| 3UTR CCA 72 bp | AAGCCAGCATCCCTGTGGGCATATGAATGGCACCTCTaGTCCCAGGGCCTGCATGCCTACCTGTCCTGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: KPASLWAYEWHL*SQGLHAYLSCC Trigger: ACAGCAGGACAGGTAGGCATGCAGGCCCTGGGACCAGAGGTGCCATTCATATGCCCACAGGGATGCTGGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
||
| 3UTR CCA 72 bp | GAGGGGCGTTTCAGACCCTGGTGTAGTCTGAAGTGCTaGGCAGATGAAGTGACAGGCAGCTCCCACGTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: EGRFRPWCSLKC*ADEVTGSSHVL Trigger: GAGCACGTGGGAGCTGCCTGTCACTTCATCTGCCCAGCACTTCAGACTACACCAGGGTCTGAAACGCCCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
||
| 3UTR CCA 72 bp | CTCTGCCTATCTCTGGGACGTCCGTGCACAAGGAGCTaGAGGATCTGCTGTGGCTCTCTCCCCTTCAGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: LCLSLGRPCTRS*RICCGSLPFSA Trigger: AGCACTGAAGGGGAGAGAGCCACAGCAGATCCTCCAGCTCCTTGTGCACGGACGTCCCAGAGATAGGCAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
||
| 3UTR GCA 72 bp | CATGAGGGGCGTTTCAGACCCTGGTGTAGTCTGAAGTaGTGGGCAGATGAAGTGACAGGCAGCTCCCACGTG | + |
|
Preference number: 3 (lower is better) Translates to: HEGRFRPWCSLK*WADEVTGSSHV Trigger: CACGTGGGAGCTGCCTGTCACTTCATCTGCCCAGCACTTCAGACTACACCAGGGTCTGAAACGCCCCTCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
||
| 3UTR-3UTR CAA 90 bp | GTAATAGCCAGACTTGAAAGCACACAGGCTGCTGCCTTTACTGGGAGCCACTTTCCTGGGTCTGCAGGTTaGCTGTGCTGCCCTGGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: VIARLESTQAAAFTGSHFPGSAG*LCCPGG Trigger: GCCACCAGGGCAGCACAGCAAACCTGCAGACCCAGG...AAAGTGGCTCCCAGTAAAGGCAGCAGCCTGTGTGCTTTCAAGTCTGGCTATTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
||
| 3UTR-3UTR CAA 90 bp | GTCCCAGGGCCTGCATGCCTACCTGTCCTGCTGTGGGAGTCCCATGTCTGCCTCAGGCTCATTAAGCTGTaGCAGATGGGCAGAATTCAA | + |
|
Preference number: 3 (lower is better) Translates to: VPGPACLPVLLWESHVCLRLIKL*QMGRIQ Trigger: TTGAATTCTGCCCATCTGCAACAGCTTAATGAGCCT...GAGGCAGACATGGGACTCCCACAGCAGGACAGGTAGGCATGCAGGCCCTGGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
||
| 3UTR TCA 72 bp | AGCCAGCAGAATTGGCATCCAGAAACAGCTGCAGTGTaGTGCCCAGACAGCTGCCACGGGGCTATGTCACAC | + |
|
Preference number: 3 (lower is better) Translates to: SQQNWHPETAAV*CPDSCHGAMSH Trigger: GTGTGACATAGCCCCGTGGCAGCTGTCTGGGCATCACACTGCAGCTGTTTCTGGATGCCAATTCTGCTGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062654.8 |
||
| 3UTR GCA 72 bp | CTTCACCAGCCAGCAGAATTGGCATCCAGAAACAGCTaGAGTGTGATGCCCAGACAGCTGCCACGGGGCTAT | + |
|
Preference number: 3 (lower is better) Translates to: LHQPAELASRNS*SVMPRQLPRGY Trigger: ATAGCCCCGTGGCAGCTGTCTGGGCATCACACTGCAGCTGTTTCTGGATGCCAATTCTGCTGGCTGGTGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062654.8 |
||
| 3UTR GCA 72 bp | CTCTCTGTGTGCCCAAGTCTTCCCAGGGCTTCCCCCTaGAGGAGCCATATGAGAGATACACAGGTGTTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: LSVCPSLPRASP*RSHMRDTQVLL Trigger: GAGCAACACCTGTGTATCTCTCATATGGCTCCTGCAGGGGGAAGCCCTGGGAAGACTTGGGCACACAGAGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
||
| 3UTR TCA 72 bp | AGCATGGGAAGGACCTCCCTTACACACATGGCCACATaGTGTGATCTCCAGGCATCTCACGCTCGCACAACC | + |
|
Preference number: 3 (lower is better) Translates to: SMGRTSLTHMAT*CDLQASHARTT Trigger: GGTTGTGCGAGCGTGAGATGCCTGGAGATCACATCATGTGGCCATGTGTGTAAGGGAGGTCCTTCCCATGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062654.8 |
||
| 3UTR TCA 72 bp | CAAGTCTTCCCAGGGCTTCCCCCTGCAGGAGCCATATaGGAGATACACAGGTGTTGCTCTAGGAGTGGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: QVFPGLPPAGAI*EIHRCCSRSGD Trigger: GTCACCACTCCTAGAGCAACACCTGTGTATCTCTCATATGGCTCCTGCAGGGGGAAGCCCTGGGAAGACTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
||
| 3UTR CCA 72 bp | CACACACCAGCATGGGAAGGACCTCCCTTACACACATaGCCACATGATGTGATCTCCAGGCATCTCACGCTC | + |
|
Preference number: 3 (lower is better) Translates to: HTPAWEGPPLHT*PHDVISRHLTL Trigger: GAGCGTGAGATGCCTGGAGATCACATCATGTGGCCATGTGTGTAAGGGAGGTCCTTCCCATGCTGGTGTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062654.8 |
||
| 3UTR CCA 72 bp | TCACCACCCAGGTGGCTTGAGCTTCACACACCAGCATaGGAAGGACCTCCCTTACACACATGGCCACATGAT | + |
|
Preference number: 3 (lower is better) Translates to: SPPRWLELHTPA*EGPPLHTWPHD Trigger: ATCATGTGGCCATGTGTGTAAGGGAGGTCCTTCCCATGCTGGTGTGTGAAGCTCAAGCCACCTGGGTGGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062654.8 |
||
| 3UTR CCA 72 bp | AACAGTCTGAGAGATCATCAGAAGCCAGCATCCCTGTaGGCATATGAATGGCACCTCTGGTCCCAGGGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: NSLRDHQKPASL*AYEWHLWSQGL Trigger: CAGGCCCTGGGACCAGAGGTGCCATTCATATGCCCACAGGGATGCTGGCTTCTGATGATCTCTCAGACTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
||
| 3UTR CCA 72 bp | AATCATGTATCACACAGCCCAGCCTCTGCCTATCTCTaGGACGTCCGTGCACAAGGAGCTGGAGGATCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: NHVSHSPASAYL*DVRAQGAGGSA Trigger: AGCAGATCCTCCAGCTCCTTGTGCACGGACGTCCCAGAGATAGGCAGAGGCTGGGCTGTGTGATACATGATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
||
| 3UTR-3UTR CAA 90 bp | CCTGGGAGGTGCCGCAGCCCACAGCGTAAAGACTTTAATCCAACTCAGAAACTTCACCACCCAGGTGGCTaGAGCTTCACACACCAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: PGRCRSPQRKDFNPTQKLHHPGG*SFTHQH Trigger: ATGCTGGTGTGTGAAGCTCAAGCCACCTGGGTGGTG...AAGTTTCTGAGTTGGATTAAAGTCTTTACGCTGTGGGCTGCGGCACCTCCCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062654.8 |
||
| 3UTR TCA 72 bp | GGGAAGGACCTCCCTTACACACATGGCCACATGATGTaGTCTCCAGGCATCTCACGCTCGCACAACCTACAA | + |
|
Preference number: 3 (lower is better) Translates to: GKDLPYTHGHMM*SPGISRSHNLQ Trigger: TTGTAGGTTGTGCGAGCGTGAGATGCCTGGAGATCACATCATGTGGCCATGTGTGTAAGGGAGGTCCTTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062654.8 |
||
| 3UTR TCA 72 bp | GGAGTCCCATGTCTGCCTCCTCTGCCTCTTTGTATCTaGTGCCTGAGGCTCATTAAGCTGTTGCAGATGGGC | + |
|
Preference number: 3 (lower is better) Translates to: GVPCLPPLPLCI*CLRLIKLLQMG Trigger: GCCCATCTGCAACAGCTTAATGAGCCTCAGGCATCAGATACAAAGAGGCAGAGGAGGCAGACATGGGACTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
||
| 3UTR TCA 72 bp | GCTGAGCCTTGCCTACCTAGCTGGGATGTCTCGCCCTaGGGCTCCACAACAAGCTTTACCATCATGGAAACT | + |
|
Preference number: 3 (lower is better) Translates to: AEPCLPSWDVSP*GSTTSFTIMET Trigger: AGTTTCCATGATGGTAAAGCTTGTTGTGGAGCCTCAGGGCGAGACATCCCAGCTAGGTAGGCAAGGCTCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
||
| 3UTR TCA 72 bp | ATCCCTGGCCATGACCTCCAGCTGCAGAGCCCTGTCTaGAACTGGCTTGTTCTAACCCTGAGGTCTTGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: IPGHDLQLQSPV*NWLVLTLRSWN Trigger: ATTCCAAGACCTCAGGGTTAGAACAAGCCAGTTTCAGACAGGGCTCTGCAGCTGGAGGTCATGGCCAGGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
||
| 3UTR CCA 72 bp | ATACACAGGTGTTGCTCTAGGAGTGGTGACAAGAGATaGGGCCATGGTGGAGTCTTGGTCCCTTATGCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: IHRCCSRSGDKR*GHGGVLVPYAR Trigger: CCTTGCATAAGGGACCAAGACTCCACCATGGCCCCATCTCTTGTCACCACTCCTAGAGCAACACCTGTGTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
||
| 3UTR-3UTR CAA 90 bp | GAAACTTGGTGCCACAGACATCTGAGGAAGGTAGCACCTTCATTGGGAGGCCATCTCCCCTTCAGTGCTTaGCTGTGTGATTCCTGTAGC | + |
|
Preference number: 3 (lower is better) Translates to: ETWCHRHLRKVAPSLGGHLPFSA*LCDSCS Trigger: GCTACAGGAATCACACAGCAAAGCACTGAAGGGGAG...ATGGCCTCCCAATGAAGGTGCTACCTTCCTCAGATGTCTGTGGCACCAAGTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
||
| 3UTR TCA 72 bp | TCCAGGCATCTCACGCTCGCACAACCTACAAAACCATaGTGTAAGATCAATGTCCAGCGCTTCACCAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: SRHLTLAQPTKP*CKINVQRFTSQ Trigger: CTGGCTGGTGAAGCGCTGGACATTGATCTTACATCATGGTTTTGTAGGTTGTGCGAGCGTGAGATGCCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062654.8 |
||
| 3UTR TCA 72 bp | TTGCAGATGGGCAGAATTCAAGGTAACAGCTCACAGTaGAGTGGCCAGGGCCTCAAGCCAAGTCATGGTAGT | + |
|
Preference number: 3 (lower is better) Translates to: LQMGRIQGNSSQ*SGQGLKPSHGS Trigger: ACTACCATGACTTGGCTTGAGGCCCTGGCCACTTCACTGTGAGCTGTTACCTTGAATTCTGCCCATCTGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
||
| 3UTR CCA 72 bp | GGCTATGTCACACACTCCACCTCTAGCAGAGGACCGTaGGAAGGGGCTCCTTCCTTAGACTTAATACAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: GYVTHSTSSRGP*EGAPSLDLIQD Trigger: ATCTTGTATTAAGTCTAAGGAAGGAGCCCCTTCCCACGGTCCTCTGCTAGAGGTGGAGTGTGTGACATAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062654.8 |
||
| 3UTR CCA 72 bp | AAGCTCAGCATTTTCTCTTGGGAGCAGAAGAAAGCCTaGCTGAGATCAGCTGACGAGGCCATGTGTGAGACA | + |
|
Preference number: 3 (lower is better) Translates to: KLSIFSWEQKKA*LRSADEAMCET Trigger: TGTCTCACACATGGCCTCGTCAGCTGATCTCAGCCAGGCTTTCTTCTGCTCCCAAGAGAAAATGCTGAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
||
| 3UTR TCA 72 bp | GTCAGCTTCTTAACTTGCTCTTGTCAGCTCTGTGCCTaGGCTCCTGTCATGTCTGTGTCATGTTGTAAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: VSFLTCSCQLCA*APVMSVSCCKR Trigger: CCTCTTACAACATGACACAGACATGACAGGAGCTCAGGCACAGAGCTGACAAGAGCAAGTTAAGAAGCTGAC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
||
| 3UTR GCA 72 bp | CACTTATTTTTGTGCTGTGGGTGGCAAAGCTTACTGTaGAAACACAAAGGAGTGAGCTCTGTACACACGGGC | + |
|
Preference number: 3 (lower is better) Translates to: HLFLCCGWQSLL*KHKGVSSVHTG Trigger: GCCCGTGTGTACAGAGCTCACTCCTTTGTGTTTGCACAGTAAGCTTTGCCACCCACAGCACAAAAATAAGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062654.8 |
||
| 3UTR GCA 72 bp | GCCTCAGGTTGTAATTACAGCTTTTATCCTGGGAGGTaGCGCAGCCCACAGCGTAAAGACTTTAATCCAACT | + |
|
Preference number: 3 (lower is better) Translates to: ASGCNYSFYPGR*RSPQRKDFNPT Trigger: AGTTGGATTAAAGTCTTTACGCTGTGGGCTGCGGCACCTCCCAGGATAAAAGCTGTAATTACAACCTGAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062654.8 |
||
| 3UTR TCA 72 bp | CTGTTAACTTGTTTCACAGCTCTGTTCTTCTGTCCCTaGTTACCCTGGGGCCAGCACTCTTTCTTGACACAT | + |
|
Preference number: 3 (lower is better) Translates to: LLTCFTALFFCP*LPWGQHSFLTH Trigger: ATGTGTCAAGAAAGAGTGCTGGCCCCAGGGTAATCAGGGACAGAAGAACAGAGCTGTGAAACAAGTTAACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
||
| 3UTR GCA 72 bp | CAAGAGATGGGGCCATGGTGGAGTCTTGGTCCCTTATaGAAGGTGAACTCTGCCCTTTACATTGTTAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: QEMGPWWSLGPL*KVNSALYIVRK Trigger: TTTTCTAACAATGTAAAGGGCAGAGTTCACCTTGCATAAGGGACCAAGACTCCACCATGGCCCCATCTCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
||
| 3UTR CCA 72 bp | AGAGCTATTACTACACAATTCAAGCTGCCAGGATTCTaGGACATGGCAGGCTTTAGCCATCTATCAAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: RAITTQFKLPGF*DMAGFSHLSRE Trigger: CTCTCTTGATAGATGGCTAAAGCCTGCCATGTCCCAGAATCCTGGCAGCTTGAATTGTGTAGTAATAGCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
||
| 3UTR CCA 72 bp | AAACTTACATTAGATCACTTATTTTTGTGCTGTGGGTaGCAAAGCTTACTGTGCAAACACAAAGGAGTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: KLTLDHLFLCCG*QSLLCKHKGVS Trigger: GCTCACTCCTTTGTGTTTGCACAGTAAGCTTTGCCACCCACAGCACAAAAATAAGTGATCTAATGTAAGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062654.8 |
||
| 3UTR GCA 72 bp | CCAACTCAGAAACTTACATTAGATCACTTATTTTTGTaGTGTGGGTGGCAAAGCTTACTGTGCAAACACAAA | + |
|
Preference number: 3 (lower is better) Translates to: PTQKLTLDHLFL*CGWQSLLCKHK Trigger: TTTGTGTTTGCACAGTAAGCTTTGCCACCCACAGCACAAAAATAAGTGATCTAATGTAAGTTTCTGAGTTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062654.8 |
||
| 3UTR CCA 72 bp | TCAGAAACTTACATTAGATCACTTATTTTTGTGCTGTaGGTGGCAAAGCTTACTGTGCAAACACAAAGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: SETYIRSLIFVL*VAKLTVQTQRS Trigger: ACTCCTTTGTGTTTGCACAGTAAGCTTTGCCACCCACAGCACAAAAATAAGTGATCTAATGTAAGTTTCTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062654.8 |
||
| CDS-3UTR CCA 90 bp | CCCAGGGCCTGCATGCCTACCTGTCCTGCTGTGGGAGTCCCATGTCTGCCTCCTATCACCGTGGGGCCGTaGGAGGTGAACACCTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PRACMPTCPAVGVPCLPPITVGP*EVNTCV Trigger: GACACAGGTGTTCACCTCCCACGGCCCCACGGTGAT...AGGAGGCAGACATGGGACTCCCACAGCAGGACAGGTAGGCATGCAGGCCCTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
||
| CDS-3UTR TCA 90 bp | TGCTGTGCTGCCCTGGTGGCAGGGACTTCTAGGGGCCTGCGGCCTGGTTCACACCTGCATTCCAGATGGTaGAGGACTTCCAGTGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: CCAALVAGTSRGLRPGSHLHSRW*RTSSEV Trigger: TACCTCACTGGAAGTCCTTCACCATCTGGAATGCAG...GTGTGAACCAGGCCGCAGGCCCCTAGAAGTCCCTGCCACCAGGGCAGCACAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
||
| CDS-3UTR CCA 90 bp | GCCCTGGTGGCAGGGACTTCTAGGGGCCTGCGGCCTGGTTCACACTTCATTCCAGAACAGCAGATCCTCTaGAACACCCTGGCCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ALVAGTSRGLRPGSHFIPEQQIL*NTLASF Trigger: GAAGGAGGCCAGGGTGTTCCAGAGGATCTGCTGTTC...TGGAATGAAGTGTGAACCAGGCCGCAGGCCCCTAGAAGTCCCTGCCACCAGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
||
| CDS-3UTR GCA 90 bp | GCCCTGGTGGCAGGGACTTCTAGGGGCCTGCGGCCTGGTTCACACTTCATTCCAAGGAAGTGGACACGGTaGGTCCAGATGGTCATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ALVAGTSRGLRPGSHFIPRKWTR*VQMVIS Trigger: TGAGATGACCATCTGGACGCACCGTGTCCACTTCCT...TGGAATGAAGTGTGAACCAGGCCGCAGGCCCCTAGAAGTCCCTGCCACCAGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
||
| CDS-3UTR CCA 90 bp | TTGGCATCCAGAAACAGCTGCAGTGTGATGCCCAGACAGCTGCCACGGGGCTATATCACCGTGGGGCCGTaGGAGGTGAACACCTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LASRNSCSVMPRQLPRGYITVGP*EVNTCV Trigger: GACACAGGTGTTCACCTCCCACGGCCCCACGGTGAT...ATAGCCCCGTGGCAGCTGTCTGGGCATCACACTGCAGCTGTTTCTGGATGCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062654.8 |
||
| CDS-3UTR TCA 90 bp | AAACAGCTGCAGTGTGATGCCCAGACAGCTGCCACGGGGCTATGTCACACACTCCGCCACCGCCCTTCCTaGGGTGCTCATAGAAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: KQLQCDAQTAATGLCHTLRHRPS*GAHRRT Trigger: TGTTCTTCTATGAGCACCTCAGGAAGGGCGGTGGCG...GAGTGTGTGACATAGCCCCGTGGCAGCTGTCTGGGCATCACACTGCAGCTGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062654.8 |
||
| CDS-3UTR TCA 90 bp | CCCAGGGCCTGCATGCCTACCTGTCCTGCTGTGGGAGTCCCATGTCTGCCTCCTAGTAGAAGCCCTTCCTaGTCTTGTTCTCATCAACGT | + |
|
Preference number: 4 (lower is better) Translates to: PRACMPTCPAVGVPCLPPSRSPS*SCSHQR Trigger: ACGTTGATGAGAACAAGATCAGGAAGGGCTTCTACT...AGGAGGCAGACATGGGACTCCCACAGCAGGACAGGTAGGCATGCAGGCCCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
||
| CDS-3UTR CCA 90 bp | TGTTCTAACCCTGAGGTCTTGGAATTTAGCAGGCATGGTCTCACTGGTCAGCTTCCACCTTGTGCCGGCTaGCTGCAGTCAGGCTGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: CSNPEVLEFSRHGLTGQLPPCAG*LQSGCG Trigger: ACCGCAGCCTGACTGCAGCCAGCCGGCACAAGGTGG...AAGCTGACCAGTGAGACCATGCCTGCTAAATTCCAAGACCTCAGGGTTAGAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
||
| CDS-3UTR GCA 90 bp | TATGTCACACACTCCACCTCTAGCAGAGGACCGTGGGAAGGGGCTCCTTCCTTAAAAGGTAAGACCCTGTaGTCTGTGCGACGGCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: YVTHSTSSRGPWEGAPSLKGKTL*SVRRLG Trigger: ACCAAGCCGTCGCACAGAGCACAGGGTCTTACCTTT...TAAGGAAGGAGCCCCTTCCCACGGTCCTCTGCTAGAGGTGGAGTGTGTGACATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062654.8 |
||
| CDS-3UTR CCA 90 bp | ACACACTCCACCTCTAGCAGAGGACCGTGGGAAGGGGCTCCTTCCTTAGACTTATCCTCTGGAACACCCTaGCCTCCTTCATCAAATGGG | + |
|
Preference number: 4 (lower is better) Translates to: THSTSSRGPWEGAPSLDLSSGTP*PPSSNG Trigger: CCCATTTGATGAAGGAGGCCAGGGTGTTCCAGAGGA...TAAGTCTAAGGAAGGAGCCCCTTCCCACGGTCCTCTGCTAGAGGTGGAGTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062654.8 |
||
| CDS-3UTR TCA 90 bp | CTTCCCAGGGCTTCCCCCTGCAGGAGCCATATGAGAGATACACAGGTGTTGCTCAGTCATGGCCTCCGATaGCTACAGAGATTCCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LPRASPCRSHMRDTQVLLSHGLR*LQRFQN Trigger: ATTCTGGAATCTCTGTAGTCATCGGAGGCCATGACT...GAGCAACACCTGTGTATCTCTCATATGGCTCCTGCAGGGGGAAGCCCTGGGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
||
| CDS-3UTR GCA 90 bp | GGCTGCTCTACTAAGAGACATGATGGGTGCCACCTGGGTGGGCTACAAGTCACCCTACCATCATGTGACTaGAGTCAAGGACCGAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: GCSTKRHDGCHLGGLQVTLPSCD*SQGPNV Trigger: CACATTCGGTCCTTGACTGCAGTCACATGATGGTAG...GGTGACTTGTAGCCCACCCAGGTGGCACCCATCATGTCTCTTAGTAGAGCAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062654.8 |
||
| CDS-3UTR CCA 90 bp | AAACAGCTGCAGTGTGATGCCCAGACAGCTGCCACGGGGCTATGTCACACACTCAATATCCAACTCCTCTaGGAGAAGGAGAGTCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: KQLQCDAQTAATGLCHTLNIQLL*EKESHG Trigger: GCCATGACTCTCCTTCTCCCAGAGGAGTTGGATATT...GAGTGTGTGACATAGCCCCGTGGCAGCTGTCTGGGCATCACACTGCAGCTGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062654.8 |
||
| CDS-3UTR CCA 90 bp | CCTGGGAGGTGCCGCAGCCCACAGCGTAAAGACTTTAATCCAACTCAGAAACTTGAACAGCAGATCCTCTaGAACACCCTGGCCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PGRCRSPQRKDFNPTQKLEQQIL*NTLASF Trigger: GAAGGAGGCCAGGGTGTTCCAGAGGATCTGCTGTTC...AAGTTTCTGAGTTGGATTAAAGTCTTTACGCTGTGGGCTGCGGCACCTCCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062654.8 |
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| CDS-3UTR TCA 90 bp | TGGCTTGTTCTAACCCTGAGGTCTTGGAATTTAGCAGGCATGGTCTCACTGGTCCCAGCTTCACACAGATaGCAAAGGGAGACTGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: WLVLTLRSWNLAGMVSLVPASHR*QRETGQ Trigger: CTGCCCAGTCTCCCTTTGTCATCTGTGTGAAGCTGG...GACCAGTGAGACCATGCCTGCTAAATTCCAAGACCTCAGGGTTAGAACAAGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| CDS-3UTR GCA 90 bp | GTAATAGCCAGACTTGAAAGCACACAGGCTGCTGCCTTTACTGGGAGCCACTTTACGCCCCTGCTTGCCTaGATTCCAGATGGTGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VIARLESTQAAAFTGSHFTPLLA*IPDGEG Trigger: TCCTTCACCATCTGGAATGCAGGCAAGCAGGGGCGT...AAAGTGGCTCCCAGTAAAGGCAGCAGCCTGTGTGCTTTCAAGTCTGGCTATTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| CDS-3UTR CCA 90 bp | TGTTCTAACCCTGAGGTCTTGGAATTTAGCAGGCATGGTCTCACTGGTCAGCTTGGAGACTGGGCAGCTTaGAAATGCAGGATGGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: CSNPEVLEFSRHGLTGQLGDWAA*KCRMGT Trigger: GGTCCCCATCCTGCATTTCCAAGCTGCCCAGTCTCC...AAGCTGACCAGTGAGACCATGCCTGCTAAATTCCAAGACCTCAGGGTTAGAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| CDS-3UTR TCA 90 bp | CTTGTCAGCTCTGTGCCTGAGCTCCTGTCATGTCTGTGTCATGTTGTAAGAGGTCAAACTCACCTCCTGTaGGGTCCAGCTTCACACAGA | + |
|
Preference number: 4 (lower is better) Translates to: LVSSVPELLSCLCHVVRGQTHLL*GPASHR Trigger: TCTGTGTGAAGCTGGACCTCACAGGAGGTGAGTTTG...ACCTCTTACAACATGACACAGACATGACAGGAGCTCAGGCACAGAGCTGACAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| CDS-3UTR GCA 90 bp | CACCAGCCAGCAGAATTGGCATCCAGAAACAGCTGCAGTGTGATGCCCAGACAGTGTATCTGTTTCATGTaGACTGCTGCTCCTACCATC | + |
|
Preference number: 4 (lower is better) Translates to: HQPAELASRNSCSVMPRQCICFM*TAAPTI Trigger: GATGGTAGGAGCAGCAGTGCACATGAAACAGATACA...CTGTCTGGGCATCACACTGCAGCTGTTTCTGGATGCCAATTCTGCTGGCTGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062654.8 |
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| CDS-3UTR CCA 90 bp | CTTCCCAGGGCTTCCCCCTGCAGGAGCCATATGAGAGATACACAGGTGTTGCTCCTCTGTGCGACGGCTTaGTTTTTAGAATATCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: LPRASPCRSHMRDTQVLLLCATA*FLEYPT Trigger: AGTTGGATATTCTAAAAACCAAGCCGTCGCACAGAG...GAGCAACACCTGTGTATCTCTCATATGGCTCCTGCAGGGGGAAGCCCTGGGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| CDS-3UTR CCA 90 bp | TGGCTTGTTCTAACCCTGAGGTCTTGGAATTTAGCAGGCATGGTCTCACTGGTCTGTTCCTCTAGGAAGTaGACACGGTGCGTCCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: WLVLTLRSWNLAGMVSLVCSSRK*TRCVQM Trigger: CATCTGGACGCACCGTGTCCACTTCCTAGAGGAACA...GACCAGTGAGACCATGCCTGCTAAATTCCAAGACCTCAGGGTTAGAACAAGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| CDS-3UTR CCA 90 bp | GAAACTTGGTGCCACAGACATCTGAGGAAGGTAGCACCTTCATTGGGAGGCCATATGACAAAGGGAGACTaGGCAGCTTGGAAATGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ETWCHRHLRKVAPSLGGHMTKGD*AAWKCR Trigger: CCTGCATTTCCAAGCTGCCCAGTCTCCCTTTGTCAT...ATGGCCTCCCAATGAAGGTGCTACCTTCCTCAGATGTCTGTGGCACCAAGTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| 3UTR CAA 72 bp | CGTGCTTTGCTCTGGTGGCCGGGACTGCCCATACGTTaGCTGTCACAGACGTGCTTCTCATTAAATCATGTA | + |
|
Preference number: 4 (lower is better) Translates to: RALLWWPGLPIR*LSQTCFSLNHV Trigger: TACATGATTTAATGAGAAGCACGTCTGTGACAGCAAACGTATGGGCAGTCCCGGCCACCAGAGCAAAGCACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| 3UTR CAA 72 bp | AGGCATGGTCTCACTGGTCAGCTTCTTAACTTGCTCTaGTCAGCTCTGTGCCTGAGCTCCTGTCATGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RHGLTGQLLNLL*SALCLSSCHVC Trigger: ACAGACATGACAGGAGCTCAGGCACAGAGCTGACAAGAGCAAGTTAAGAAGCTGACCAGTGAGACCATGCCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| 3UTR CAA 72 bp | CTATCAAGAGAGGGTGAGGTAGCAACCAGCCTGATGTaGCCATGTCTCTTTACAGCCTATTCCAGGAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSREGEVATSLM*PCLFTAYSRKL Trigger: CAGCTTCCTGGAATAGGCTGTAAAGAGACATGGCAACATCAGGCTGGTTGCTACCTCACCCTCTCTTGATAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| 3UTR CAA 72 bp | TTTAGCAGGCATGGTCTCACTGGTCAGCTTCTTAACTaGCTCTTGTCAGCTCTGTGCCTGAGCTCCTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: FSRHGLTGQLLN*LLSALCLSSCH Trigger: ATGACAGGAGCTCAGGCACAGAGCTGACAAGAGCAAGTTAAGAAGCTGACCAGTGAGACCATGCCTGCTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| CDS-3UTR TCA 90 bp | GTAAGATCAATGTCCAGCGCTTCACCAGCCAGCAGAATTGGCATCCAGAAACAGAGTCATGGCCTCCGATaGCTACAGAGATTCCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: VRSMSSASPASRIGIQKQSHGLR*LQRFQN Trigger: ATTCTGGAATCTCTGTAGTCATCGGAGGCCATGACT...CTGTTTCTGGATGCCAATTCTGCTGGCTGGTGAAGCGCTGGACATTGATCTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062654.8 |
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| CDS-3UTR GCA 90 bp | TACCATCATGGAAACTTGGTGCCACAGACATCTGAGGAAGGTAGCACCTTCATTAAAGGTAAGACCCTGTaGTCTGTGCGACGGCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: YHHGNLVPQTSEEGSTFIKGKTL*SVRRLG Trigger: ACCAAGCCGTCGCACAGAGCACAGGGTCTTACCTTT...AATGAAGGTGCTACCTTCCTCAGATGTCTGTGGCACCAAGTTTCCATGATGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| CDS-3UTR CCA 90 bp | GTAATAGCCAGACTTGAAAGCACACAGGCTGCTGCCTTTACTGGGAGCCACTTTAATATCCAACTCCTCTaGGAGAAGGAGAGTCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: VIARLESTQAAAFTGSHFNIQLL*EKESHG Trigger: GCCATGACTCTCCTTCTCCCAGAGGAGTTGGATATT...AAAGTGGCTCCCAGTAAAGGCAGCAGCCTGTGTGCTTTCAAGTCTGGCTATTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| CDS-3UTR TCA 90 bp | CCTGGGAGGTGCCGCAGCCCACAGCGTAAAGACTTTAATCCAACTCAGAAACTTCAGATGTCAAATGGTTaGTCCAACGTGTATATCGCT | + |
|
Preference number: 4 (lower is better) Translates to: PGRCRSPQRKDFNPTQKLQMSNG*SNVYIA Trigger: AGCGATATACACGTTGGATCAACCATTTGACATCTG...AAGTTTCTGAGTTGGATTAAAGTCTTTACGCTGTGGGCTGCGGCACCTCCCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062654.8 |
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| CDS-3UTR GCA 90 bp | GGACCGTGGGAAGGGGCTCCTTCCTTAGACTTAATACAAGATGATGTAAACCATTGCATCCTCACTCTCTaGGGCATCATGACATCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GPWEGAPSLDLIQDDVNHCILTL*GIMTSS Trigger: AGACGATGTCATGATGCCGCAGAGAGTGAGGATGCA...ATGGTTTACATCATCTTGTATTAAGTCTAAGGAAGGAGCCCCTTCCCACGGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062654.8 |
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| CDS-3UTR CCA 90 bp | GTAAGATCAATGTCCAGCGCTTCACCAGCCAGCAGAATTGGCATCCAGAAACAGGGATCTCTTCTCACTTaGCATCCTATGATACTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: VRSMSSASPASRIGIQKQGSLLT*HPMILV Trigger: GACGAGTATCATAGGATGCCAAGTGAGAAGAGATCC...CTGTTTCTGGATGCCAATTCTGCTGGCTGGTGAAGCGCTGGACATTGATCTTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062654.8 |
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| CDS-3UTR CCA 90 bp | CCCATACGTTTGCTGTCACAGACGTGCTTCTCATTAAATCATGTATCACACAGCTCCTCTGGAACACCCTaGCCTCCTTCATCAAATGGG | + |
|
Preference number: 4 (lower is better) Translates to: PIRLLSQTCFSLNHVSHSSSGTP*PPSSNG Trigger: CCCATTTGATGAAGGAGGCCAGGGTGTTCCAGAGGA...GCTGTGTGATACATGATTTAATGAGAAGCACGTCTGTGACAGCAAACGTATGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| CDS-3UTR TCA 90 bp | CCCATACGTTTGCTGTCACAGACGTGCTTCTCATTAAATCATGTATCACACAGCGTGAAGGACTTCCAGTaGGGTAGGACTTGTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PIRLLSQTCFSLNHVSHSVKDFQ*GRTCSS Trigger: AGAGGAACAAGTCCTACCTCACTGGAAGTCCTTCAC...GCTGTGTGATACATGATTTAATGAGAAGCACGTCTGTGACAGCAAACGTATGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| CDS-3UTR CCA 90 bp | CATGATGTAAGATCAATGTCCAGCGCTTCACCAGCCAGCAGAATTGGCATCCAGCTCTGTGCGACGGCTTaGTTTTTAGAATATCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: HDVRSMSSASPASRIGIQLCATA*FLEYPT Trigger: AGTTGGATATTCTAAAAACCAAGCCGTCGCACAGAG...CTGGATGCCAATTCTGCTGGCTGGTGAAGCGCTGGACATTGATCTTACATCATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062654.8 |
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| CDS-3UTR CCA 90 bp | CCCATACGTTTGCTGTCACAGACGTGCTTCTCATTAAATCATGTATCACACAGCTGGGGACCTTTGGCTTaGGTCTTTCCTGTGAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PIRLLSQTCFSLNHVSHSWGPLA*VFPVSL Trigger: AAGACTCACAGGAAAGACCCAAGCCAAAGGTCCCCA...GCTGTGTGATACATGATTTAATGAGAAGCACGTCTGTGACAGCAAACGTATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| CDS-3UTR CCA 90 bp | TTATTAATGTACTCTGACAAGGCCACAGAGCTATTACTACACAATTCAAGCTGCCTTGGAAATGCAGGATaGGGACCTTTGGCTTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LLMYSDKATELLLHNSSCLGNAG*GPLAWV Trigger: GACCCAAGCCAAAGGTCCCCATCCTGCATTTCCAAG...GCAGCTTGAATTGTGTAGTAATAGCTCTGTGGCCTTGTCAGAGTACATTAATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| CDS-3UTR GCA 90 bp | TTATTAATGTACTCTGACAAGGCCACAGAGCTATTACTACACAATTCAAGCTGCTGCATCCTCACTCTCTaGGGCATCATGACATCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLMYSDKATELLLHNSSCCILTL*GIMTSS Trigger: AGACGATGTCATGATGCCGCAGAGAGTGAGGATGCA...GCAGCTTGAATTGTGTAGTAATAGCTCTGTGGCCTTGTCAGAGTACATTAATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| CDS-3UTR TCA 90 bp | TTATTAATGTACTCTGACAAGGCCACAGAGCTATTACTACACAATTCAAGCTGCCAGATGTCAAATGGTTaGTCCAACGTGTATATCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLMYSDKATELLLHNSSCQMSNG*SNVYIA Trigger: AGCGATATACACGTTGGATCAACCATTTGACATCTG...GCAGCTTGAATTGTGTAGTAATAGCTCTGTGGCCTTGTCAGAGTACATTAATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| CDS-3UTR CAA 90 bp | GAATGGCACCTCTGGTCCCAGGGCCTGCATGCCTACCTGTCCTGCTGTGGGAGTCAGAAGGCCACCACCTaGTGCCGGCTGGCTGCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: EWHLWSQGLHAYLSCCGSQKATT*CRLAAV Trigger: GACTGCAGCCAGCCGGCACAAGGTGGTGGCCTTCTG...ACTCCCACAGCAGGACAGGTAGGCATGCAGGCCCTGGGACCAGAGGTGCCATTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| CDS-3UTR CAA 90 bp | GCCCTGGTGGCAGGGACTTCTAGGGGCCTGCGGCCTGGTTCACACTTCATTCCAGGGAGACTGGGCAGCTaGGAAATGCAGGATGGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: ALVAGTSRGLRPGSHFIPGRLGS*EMQDGD Trigger: GTCCCCATCCTGCATTTCCAAGCTGCCCAGTCTCCC...TGGAATGAAGTGTGAACCAGGCCGCAGGCCCCTAGAAGTCCCTGCCACCAGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| CDS-3UTR CAA 90 bp | GCCCTGGTGGCAGGGACTTCTAGGGGCCTGCGGCCTGGTTCACACTTCATTCCAGCAGGATGGGGACCTTaGGCTTGGGTCTTTCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: ALVAGTSRGLRPGSHFIPAGWGP*AWVFPV Trigger: CACAGGAAAGACCCAAGCCAAAGGTCCCCATCCTGC...TGGAATGAAGTGTGAACCAGGCCGCAGGCCCCTAGAAGTCCCTGCCACCAGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| CDS GCA 90 bp | TTCCTGATCTTGTTCTCATCAACGTCACAGAAGGCCACCACCTTGTaGCGGCTGGCTGCAGTCAGGCTGCGGTATAACTTACGCCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FLILFSSTSQKATTL*RLAAVRLRYNLRPC Trigger: GCAGGGGCGTAAGTTATACCGCAGCCTGACTGCAGCCAGCCGGCACAAGGTGGTGGCCTTCTGTGACGTTGATGAGAACAAGATCAGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| CDS-3UTR CAA 90 bp | CTTCCCAGGGCTTCCCCCTGCAGGAGCCATATGAGAGATACACAGGTGTTGCTCAACTTACGCCCCTGCTaGCCTGCATTCCAGATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LPRASPCRSHMRDTQVLLNLRPC*PAFQMV Trigger: CACCATCTGGAATGCAGGCAAGCAGGGGCGTAAGTT...GAGCAACACCTGTGTATCTCTCATATGGCTCCTGCAGGGGGAAGCCCTGGGAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| CDS TCA 90 bp | GGCTGCGGTATAACTTACGCCCCTGCTTGCCTGCATTCCAGATGGTaGAGGACTTCCAGTGAGGTAGGACTTGTTCCTCTAGGAAGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: GCGITYAPACLHSRW*RTSSEVGLVPLGSG Trigger: TCCACTTCCTAGAGGAACAAGTCCTACCTCACTGGAAGTCCTTCACCATCTGGAATGCAGGCAAGCAGGGGCGTAAGTTATACCGCAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| CDS-3UTR CAA 90 bp | TATGTCACACACTCCACCTCTAGCAGAGGACCGTGGGAAGGGGCTCCTTCCTTAATGATGGCCCTAGACTaGTCCTTGCTGGCATCGTTA | + |
|
Preference number: 5 (lower is better) Translates to: YVTHSTSSRGPWEGAPSLMMALD*SLLASL Trigger: TAACGATGCCAGCAAGGACAAGTCTAGGGCCATCAT...TAAGGAAGGAGCCCCTTCCCACGGTCCTCTGCTAGAGGTGGAGTGTGTGACATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062654.8 |
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| CDS-3UTR CAA 90 bp | TGGCTTGTTCTAACCCTGAGGTCTTGGAATTTAGCAGGCATGGTCTCACTGGTCATGGGGACCTTTGGCTaGGGTCTTTCCTGTGAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: WLVLTLRSWNLAGMVSLVMGTFG*GLSCES Trigger: AGACTCACAGGAAAGACCCAAGCCAAAGGTCCCCAT...GACCAGTGAGACCATGCCTGCTAAATTCCAAGACCTCAGGGTTAGAACAAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| CDS-3UTR CAA 90 bp | CTTGTCAGCTCTGTGCCTGAGCTCCTGTCATGTCTGTGTCATGTTGTAAGAGGTATGATGGCCCTAGACTaGTCCTTGCTGGCATCGTTA | + |
|
Preference number: 5 (lower is better) Translates to: LVSSVPELLSCLCHVVRGMMALD*SLLASL Trigger: TAACGATGCCAGCAAGGACAAGTCTAGGGCCATCAT...ACCTCTTACAACATGACACAGACATGACAGGAGCTCAGGCACAGAGCTGACAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| CDS-3UTR CAA 90 bp | TGTCTCTTTACAGCCTATTCCAGGAAGCTGAGCCTTGCCTACCTAGCTGGGATGAAGCCCTTCCTGATCTaGTTCTCATCAACGTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: CLFTAYSRKLSLAYLAGMKPFLI*FSSTSQ Trigger: CTGTGACGTTGATGAGAACAAGATCAGGAAGGGCTT...CATCCCAGCTAGGTAGGCAAGGCTCAGCTTCCTGGAATAGGCTGTAAAGAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| CDS-3UTR CAA 90 bp | GGACCGTGGGAAGGGGCTCCTTCCTTAGACTTAATACAAGATGATGTAAACCATGGGATCTCTTCTCACTaGGCATCCTATGATACTCGT | + |
|
Preference number: 5 (lower is better) Translates to: GPWEGAPSLDLIQDDVNHGISSH*ASYDTR Trigger: ACGAGTATCATAGGATGCCAAGTGAGAAGAGATCCC...ATGGTTTACATCATCTTGTATTAAGTCTAAGGAAGGAGCCCCTTCCCACGGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062654.8 |
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| CDS-3UTR CAA 90 bp | TACCATCATGGAAACTTGGTGCCACAGACATCTGAGGAAGGTAGCACCTTCATTGGGATCTCTTCTCACTaGGCATCCTATGATACTCGT | + |
|
Preference number: 5 (lower is better) Translates to: YHHGNLVPQTSEEGSTFIGISSH*ASYDTR Trigger: ACGAGTATCATAGGATGCCAAGTGAGAAGAGATCCC...AATGAAGGTGCTACCTTCCTCAGATGTCTGTGGCACCAAGTTTCCATGATGGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| CDS-3UTR CAA 90 bp | ATGACAGAATCAAGACACTGCCACCTGAGGTTTAGACAAATTCAACTCTCAAGCTCAGATGTCAAATGGTaGATCCAACGTGTATATCGC | + |
|
Preference number: 5 (lower is better) Translates to: MTESRHCHLRFRQIQLSSSDVKW*IQRVYR Trigger: GCGATATACACGTTGGATCAACCATTTGACATCTGA...GCTTGAGAGTTGAATTTGTCTAAACCTCAGGTGGCAGTGTCTTGATTCTGTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062654.8 |
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| CDS GCA 72 bp | AGGCCACCACCTTGTGCCGGCTGGCTGCAGTCAGGCTaGGGTATAACTTACGCCCCTGCTTGCCTGCATTCC | + |
|
Preference number: 6 (lower is better) Translates to: RPPPCAGWLQSG*GITYAPACLHS Trigger: GGAATGCAGGCAAGCAGGGGCGTAAGTTATACCGCAGCCTGACTGCAGCCAGCCGGCACAAGGTGGTGGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| CDS TCA 72 bp | GGCTGTGGTCCACCCGGAAGACGCCACCGCCCTTCCTaGGGTGCTCATAGAAGAACAGCAGATCCTCTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: GCGPPGRRHRPS*GAHRRTADPLE Trigger: TTCCAGAGGATCTGCTGTTCTTCTATGAGCACCTCAGGAAGGGCGGTGGCGTCTTCCGGGTGGACCACAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062654.8 ENSMUST00000067399.14 |
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| CDS CCA 72 bp | CATCAACGTCACAGAAGGCCACCACCTTGTGCCGGCTaGCTGCAGTCAGGCTGCGGTATAACTTACGCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: HQRHRRPPPCAG*LQSGCGITYAP Trigger: AGGGGCGTAAGTTATACCGCAGCCTGACTGCAGCCAGCCGGCACAAGGTGGTGGCCTTCTGTGACGTTGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| CDS CAA 90 bp | CCCTTCCTGATCTTGTTCTCATCAACGTCACAGAAGGCCACCACCTaGTGCCGGCTGGCTGCAGTCAGGCTGCGGTATAACTTACGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: PFLILFSSTSQKATT*CRLAAVRLRYNLRP Trigger: GGGGCGTAAGTTATACCGCAGCCTGACTGCAGCCAGCCGGCACAAGGTGGTGGCCTTCTGTGACGTTGATGAGAACAAGATCAGGAAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| CDS GCA 72 bp | GACATCAAGCACTCATCCAACCACTGCTCAGCGTTGTaGACGGGGAGGATGATAGACACTAGGGCCAGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: DIKHSSNHCSAL*TGRMIDTRASE Trigger: CTCGCTGGCCCTAGTGTCTATCATCCTCCCCGTGCACAACGCTGAGCAGTGGTTGGATGAGTGCTTGATGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062654.8 ENSMUST00000067399.14 |
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| CDS GCA 72 bp | CTGGCTGCAGTCAGGCTGCGGTATAACTTACGCCCCTaGTTGCCTGCATTCCAGATGGTGAAGGACTTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LAAVRLRYNLRP*LPAFQMVKDFQ Trigger: CTGGAAGTCCTTCACCATCTGGAATGCAGGCAAGCAGGGGCGTAAGTTATACCGCAGCCTGACTGCAGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
||
| CDS CAA 72 bp | ACAGACATCAAGCACTCATCCAACCACTGCTCAGCGTaGTGCACGGGGAGGATGATAGACACTAGGGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: TDIKHSSNHCSA*CTGRMIDTRAS Trigger: GCTGGCCCTAGTGTCTATCATCCTCCCCGTGCACAACGCTGAGCAGTGGTTGGATGAGTGCTTGATGTCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062654.8 ENSMUST00000067399.14 |
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| CDS CAA 72 bp | ATCTTGTTCTCATCAACGTCACAGAAGGCCACCACCTaGTGCCGGCTGGCTGCAGTCAGGCTGCGGTATAAC | + |
|
Preference number: 6 (lower is better) Translates to: ILFSSTSQKATT*CRLAAVRLRYN Trigger: GTTATACCGCAGCCTGACTGCAGCCAGCCGGCACAAGGTGGTGGCCTTCTGTGACGTTGATGAGAACAAGAT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| CDS GCA 72 bp | TTGTTCTCATCAACGTCACAGAAGGCCACCACCTTGTaGCGGCTGGCTGCAGTCAGGCTGCGGTATAACTTA | + |
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Preference number: 6 (lower is better) Translates to: LFSSTSQKATTL*RLAAVRLRYNL Trigger: TAAGTTATACCGCAGCCTGACTGCAGCCAGCCGGCACAAGGTGGTGGCCTTCTGTGACGTTGATGAGAACAA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| CDS CAA 72 bp | AAGTCCCGGCCTTCCTGCAAGTCCAGCGACTTCAAGTaGTCTTCAAACTCACCTCCTGTGAGGTCCAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: KSRPSCKSSDFK*SSNSPPVRSSF Trigger: GAAGCTGGACCTCACAGGAGGTGAGTTTGAAGACAACTTGAAGTCGCTGGACTTGCAGGAAGGCCGGGACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| CDS TCA 72 bp | TGCTTGCCTGCATTCCAGATGGTGAAGGACTTCCAGTaGGGTAGGACTTGTTCCTCTAGGAAGTGGACACGG | + |
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Preference number: 6 (lower is better) Translates to: CLPAFQMVKDFQ*GRTCSSRKWTR Trigger: CCGTGTCCACTTCCTAGAGGAACAAGTCCTACCTCACTGGAAGTCCTTCACCATCTGGAATGCAGGCAAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| CDS CAA 90 bp | AAATGGACGAAGTCCCGGCCTTCCTGCAAGTCCAGCGACTTCAAGTaGTCTTCAAACTCACCTCCTGTGAGGTCCAGCTTCACACAGATG | + |
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Preference number: 6 (lower is better) Translates to: KWTKSRPSCKSSDFK*SSNSPPVRSSFTQM Trigger: CATCTGTGTGAAGCTGGACCTCACAGGAGGTGAGTTTGAAGACAACTTGAAGTCGCTGGACTTGCAGGAAGGCCGGGACTTCGTCCATTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067399.14 |
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| CDS GCA 72 bp | GTTTCATGTGCACTGCTGCTCCTACCATCATGTGACTaGAGTCAAGGACCGAATGTGTGGCTGCATACAGGT | + |
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Preference number: 6 (lower is better) Translates to: VSCALLLLPSCD*SQGPNVWLHTG Trigger: ACCTGTATGCAGCCACACATTCGGTCCTTGACTGCAGTCACATGATGGTAGGAGCAGCAGTGCACATGAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062654.8 |
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| CDS TCA 72 bp | ATCTGTTTCATGTGCACTGCTGCTCCTACCATCATGTaGCTGCAGTCAAGGACCGAATGTGTGGCTGCATAC | + |
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Preference number: 6 (lower is better) Translates to: ICFMCTAAPTIM*LQSRTECVAAY Trigger: GTATGCAGCCACACATTCGGTCCTTGACTGCAGTCACATGATGGTAGGAGCAGCAGTGCACATGAAACAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062654.8 |
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| CDS TCA 72 bp | CAGCTTCGTACTGCATCCTCACTCTCTGCGGCATCATaGCATCGTCTGAATCCAAAAAGCAAAGGTAAGACC | + |
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Preference number: 6 (lower is better) Translates to: QLRTASSLSAAS*HRLNPKSKGKT Trigger: GGTCTTACCTTTGCTTTTTGGATTCAGACGATGTCATGATGCCGCAGAGAGTGAGGATGCAGTACGAAGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062654.8 ENSMUST00000067399.14 |
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| CDS GCA 72 bp | TGTAGTCTTGCTGTGTATCTGTTTCATGTGCACTGCTaGTCCTACCATCATGTGACTGCAGTCAAGGACCGA | + |
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Preference number: 6 (lower is better) Translates to: CSLAVYLFHVHC*SYHHVTAVKDR Trigger: TCGGTCCTTGACTGCAGTCACATGATGGTAGGAGCAGCAGTGCACATGAAACAGATACACAGCAAGACTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062654.8 |
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| CDS GCA 72 bp | AGTTGTAGTCTTGCTGTGTATCTGTTTCATGTGCACTaGTGCTCCTACCATCATGTGACTGCAGTCAAGGAC | + |
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Preference number: 6 (lower is better) Translates to: SCSLAVYLFHVH*CSYHHVTAVKD Trigger: GTCCTTGACTGCAGTCACATGATGGTAGGAGCAGCAGTGCACATGAAACAGATACACAGCAAGACTACAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062654.8 |
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