Pregenerated sensors for B3GNT9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000069920Ensembl transcript IDs: ENSMUST00000093217.9, ENSMUST00000136822.3, ENSMUST00000161745.3
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGAGACTTCCTCGTCCCCCTTCCAATAAAGCACCTATGCCCACAGTaGCAGCGTGCCATGTGCTGCCACTGGGCTGTTTGTACTAAAATG | + |
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Preference number: 1 (lower is better) Translates to: GDFLVPLPIKHLCPQ*QRAMCCHWAVCTKM Trigger: CATTTTAGTACAAACAGCCCAGTGGCAGCACATGGCACGCTGTCACTGTGGGCATAGGTGCTTTATTGGAAGGGGGACGAGGAAGTCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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| 3UTR CCA 90 bp | CAATCTTATAGTGGAGGAATCTTAGGACTCCTTCCGGGAGGGGGATaGGTCACCCTTCAGAAGTACACTGGCATGGTTTTGTGTGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: QSYSGGILGLLPGGG*VTLQKYTGMVLCVC Trigger: ACACACACACAAAACCATGCCAGTGTACTTCTGAAGGGTGACCCATCCCCCTCCCGGAAGGAGTCCTAAGATTCCTCCACTATAAGATTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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| 3UTR CCA 90 bp | AGCTCTAACACCAGACCTCAAAGGGAACAGATAAGATATGGCCACTaGGAATCCAATGAGAGAAGGAAGGAAGCTAGTAACTATACGAAA | + |
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Preference number: 1 (lower is better) Translates to: SSNTRPQREQIRYGH*ESNERRKEASNYTK Trigger: TTTCGTATAGTTACTAGCTTCCTTCCTTCTCTCATTGGATTCCCAGTGGCCATATCTTATCTGTTCCCTTTGAGGTCTGGTGTTAGAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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| 3UTR-3UTR CCA 90 bp | GACTCTTCCCATCCTCGTGATCAGAGGAGACTTCCTCGTCCCCCTTCCAATAAACTTCCGGGAGGGGGATaGGTCACCCTTCAGAAGTAC | + |
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Preference number: 2 (lower is better) Translates to: DSSHPRDQRRLPRPPSNKLPGGG*VTLQKY Trigger: GTACTTCTGAAGGGTGACCCATCCCCCTCCCGGAAG...TTTATTGGAAGGGGGACGAGGAAGTCTCCTCTGATCACGAGGATGGGAAGAGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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| 3UTR-3UTR CCA 90 bp | AGGACTCTTCCCATCCTCGTGATCAGAGGAGACTTCCTCGTCCCCCTTCCAATAGCCATGTGCTGCCACTaGGCTGTTTGTACTAAAATG | + |
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Preference number: 2 (lower is better) Translates to: RTLPILVIRGDFLVPLPIAMCCH*AVCTKM Trigger: CATTTTAGTACAAACAGCCCAGTGGCAGCACATGGC...TATTGGAAGGGGGACGAGGAAGTCTCCTCTGATCACGAGGATGGGAAGAGTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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| 3UTR-3UTR CCA 90 bp | ACCTATGCCCACAGTGACAGCGTGCCATGTGCTGCCACTGGGCTGTTTGTACTACATGGAAAACCCCTTTaGGTTCTTTCATGTTCTGTC | + |
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Preference number: 2 (lower is better) Translates to: TYAHSDSVPCAATGLFVLHGKPL*VLSCSV Trigger: GACAGAACATGAAAGAACCCAAAGGGGTTTTCCATG...TAGTACAAACAGCCCAGTGGCAGCACATGGCACGCTGTCACTGTGGGCATAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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| 3UTR-3UTR CCA 90 bp | AGGACTCTTCCCATCCTCGTGATCAGAGGAGACTTCCTCGTCCCCCTTCCAATACACCATAAACCCACATaGAAAACCCCTTTGGGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: RTLPILVIRGDFLVPLPIHHKPT*KTPLGS Trigger: AGAACCCAAAGGGGTTTTCCATGTGGGTTTATGGTG...TATTGGAAGGGGGACGAGGAAGTCTCCTCTGATCACGAGGATGGGAAGAGTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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| 3UTR-3UTR CCA 90 bp | AGGACTCTTCCCATCCTCGTGATCAGAGGAGACTTCCTCGTCCCCCTTCCAATACCTTCAGAAGTACACTaGCATGGTTTTGTGTGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: RTLPILVIRGDFLVPLPIPSEVH*HGFVCV Trigger: CACACACACAAAACCATGCCAGTGTACTTCTGAAGG...TATTGGAAGGGGGACGAGGAAGTCTCCTCTGATCACGAGGATGGGAAGAGTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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| 3UTR-3UTR TCA 90 bp | GACTCTTCCCATCCTCGTGATCAGAGGAGACTTCCTCGTCCCCCTTCCAATAAAAGCTCTCTCAGTGAGTaGTCTGGAGAAAAGTCATGT | + |
|
Preference number: 2 (lower is better) Translates to: DSSHPRDQRRLPRPPSNKSSLSE*SGEKSC Trigger: ACATGACTTTTCTCCAGATCACTCACTGAGAGAGCT...TTTATTGGAAGGGGGACGAGGAAGTCTCCTCTGATCACGAGGATGGGAAGAGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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| 3UTR-3UTR TCA 90 bp | GGGAATCCAATGAGAGAAGGAAGGAAGCTAGTAACTATACGAAAATGCCTGCCAAGCTCTCTCAGTGAGTaGTCTGGAGAAAAGTCATGT | + |
|
Preference number: 2 (lower is better) Translates to: GNPMREGRKLVTIRKCLPSSLSE*SGEKSC Trigger: ACATGACTTTTCTCCAGATCACTCACTGAGAGAGCT...TGGCAGGCATTTTCGTATAGTTACTAGCTTCCTTCCTTCTCTCATTGGATTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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| 3UTR-3UTR CCA 90 bp | GATATGGCCACTGGGAATCCAATGAGAGAAGGAAGGAAGCTAGTAACTATACGACACCATAAACCCACATaGAAAACCCCTTTGGGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: DMATGNPMREGRKLVTIRHHKPT*KTPLGS Trigger: AGAACCCAAAGGGGTTTTCCATGTGGGTTTATGGTG...TCGTATAGTTACTAGCTTCCTTCCTTCTCTCATTGGATTCCCAGTGGCCATATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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| 3UTR-3UTR CCA 90 bp | GGGAATCCAATGAGAGAAGGAAGGAAGCTAGTAACTATACGAAAATGCCTGCCACATGGAAAACCCCTTTaGGTTCTTTCATGTTCTGTC | + |
|
Preference number: 2 (lower is better) Translates to: GNPMREGRKLVTIRKCLPHGKPL*VLSCSV Trigger: GACAGAACATGAAAGAACCCAAAGGGGTTTTCCATG...TGGCAGGCATTTTCGTATAGTTACTAGCTTCCTTCCTTCTCTCATTGGATTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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| 3UTR CAA 90 bp | GCTGCCACTGGGCTGTTTGTACTAAAATGTGAGCTGTTGATTTCCTaGAAGCTGGAGTTGAAGAATATGAGCAATCTTATAGTGGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: AATGLFVLKCELLIS*KLELKNMSNLIVEE Trigger: TTCCTCCACTATAAGATTGCTCATATTCTTCAACTCCAGCTTCAAGGAAATCAACAGCTCACATTTTAGTACAAACAGCCCAGTGGCAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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| 3UTR CAA 90 bp | GTGCCATGTGCTGCCACTGGGCTGTTTGTACTAAAATGTGAGCTGTaGATTTCCTTGAAGCTGGAGTTGAAGAATATGAGCAATCTTATA | + |
|
Preference number: 2 (lower is better) Translates to: VPCAATGLFVLKCEL*ISLKLELKNMSNLI Trigger: TATAAGATTGCTCATATTCTTCAACTCCAGCTTCAAGGAAATCAACAGCTCACATTTTAGTACAAACAGCCCAGTGGCAGCACATGGCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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| 3UTR TCA 72 bp | CTCGTCCCCCTTCCAATAAAGCACCTATGCCCACAGTaGCAGCGTGCCATGTGCTGCCACTGGGCTGTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: LVPLPIKHLCPQ*QRAMCCHWAVC Trigger: ACAAACAGCCCAGTGGCAGCACATGGCACGCTGTCACTGTGGGCATAGGTGCTTTATTGGAAGGGGGACGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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| 3UTR TCA 72 bp | GGGCCTACAGCCAGGCCTGTGTGGCACTCCCATGACTaGTTTGACAGGTGTCTTCCCATTTGGACCTTCGTC | + |
|
Preference number: 3 (lower is better) Translates to: GPTARPVWHSHD*FDRCLPIWTFV Trigger: GACGAAGGTCCAAATGGGAAGACACCTGTCAAATCAGTCATGGGAGTGCCACACAGGCCTGGCTGTAGGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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| 3UTR GCA 72 bp | ATGAGAGAAGGAAGGAAGCTAGTAACTATACGAAAATaGCTGCCAGGTCCACGAGGGCTGAGGCCTGGCTAT | + |
|
Preference number: 3 (lower is better) Translates to: MREGRKLVTIRK*LPGPRGLRPGY Trigger: ATAGCCAGGCCTCAGCCCTCGTGGACCTGGCAGGCATTTTCGTATAGTTACTAGCTTCCTTCCTTCTCTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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| 3UTR TCA 72 bp | GCCATGTGCTGCCACTGGGCTGTTTGTACTAAAATGTaGGCTGTTGATTTCCTTGAAGCTGGAGTTGAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: AMCCHWAVCTKM*AVDFLEAGVEE Trigger: TTCTTCAACTCCAGCTTCAAGGAAATCAACAGCTCACATTTTAGTACAAACAGCCCAGTGGCAGCACATGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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| 3UTR CCA 72 bp | GTCATGTACACCATAAACCCACATGGAAAACCCCTTTaGGTTCTTTCATGTTCTGTCCTGCAGCTGAGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: VMYTINPHGKPL*VLSCSVLQLSK Trigger: CTTACTCAGCTGCAGGACAGAACATGAAAGAACCCAAAGGGGTTTTCCATGTGGGTTTATGGTGTACATGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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| 3UTR CCA 72 bp | ACCAGACCTCAAAGGGAACAGATAAGATATGGCCACTaGGAATCCAATGAGAGAAGGAAGGAAGCTAGTAAC | + |
|
Preference number: 3 (lower is better) Translates to: TRPQREQIRYGH*ESNERRKEASN Trigger: GTTACTAGCTTCCTTCCTTCTCTCATTGGATTCCCAGTGGCCATATCTTATCTGTTCCCTTTGAGGTCTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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| 3UTR-3UTR CAA 90 bp | GATATGGCCACTGGGAATCCAATGAGAGAAGGAAGGAAGCTAGTAACTATACGATATGGGTATATCCACTaGTGTTTGTTTCATCCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: DMATGNPMREGRKLVTIRYGYIH*CLFHPS Trigger: GCTGGGATGAAACAAACACAAGTGGATATACCCATA...TCGTATAGTTACTAGCTTCCTTCCTTCTCTCATTGGATTCCCAGTGGCCATATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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| 3UTR-3UTR CAA 90 bp | GGGAATCCAATGAGAGAAGGAAGGAAGCTAGTAACTATACGAAAATGCCTGCCATATGGGTATATCCACTaGTGTTTGTTTCATCCCAGC | + |
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Preference number: 3 (lower is better) Translates to: GNPMREGRKLVTIRKCLPYGYIH*CLFHPS Trigger: GCTGGGATGAAACAAACACAAGTGGATATACCCATA...TGGCAGGCATTTTCGTATAGTTACTAGCTTCCTTCCTTCTCTCATTGGATTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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| CDS-3UTR TCA 90 bp | TTTGGACCTTCGTCTGGCCAGAGACCCTGCACATCCCACTGTCAGGGTAGCCAGGCACAGACTGGGCCCTaGGGCCCATGCAACAAGCGC | + |
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Preference number: 4 (lower is better) Translates to: FGPSSGQRPCTSHCQGSQAQTGP*GPCNKR Trigger: GCGCTTGTTGCATGGGCCTCAGGGCCCAGTCTGTGC...CTGGCTACCCTGACAGTGGGATGTGCAGGGTCTCTGGCCAGACGAAGGTCCAAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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| CDS-3UTR GCA 90 bp | GCTCTCTCAGTGAGTGATCTGGAGAAAAGTCATGTACACCATAAACCCACATGGCGCACGAGTGCCCCCTaGACGCGACCCTCGGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: ALSVSDLEKSHVHHKPTWRTSAP*TRPSAP Trigger: GGGAGCCGAGGGTCGCGTGCAGGGGGCACTCGTGCG...CCATGTGGGTTTATGGTGTACATGACTTTTCTCCAGATCACTCACTGAGAGAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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| CDS-3UTR CCA 90 bp | AGGACTCTTCCCATCCTCGTGATCAGAGGAGACTTCCTCGTCCCCCTTCCAATACAGAGCCCGCCCCCTTaGGCACGCCCAACAAGAACA | + |
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Preference number: 4 (lower is better) Translates to: RTLPILVIRGDFLVPLPIQSPPP*ARPTRT Trigger: TGTTCTTGTTGGGCGTGCCCAAGGGGGCGGGCTCTG...TATTGGAAGGGGGACGAGGAAGTCTCCTCTGATCACGAGGATGGGAAGAGTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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| CDS-3UTR GCA 90 bp | TTAGTTAGCTCTAACACCAGACCTCAAAGGGAACAGATAAGATATGGCCACTGGCGCACGAGTGCCCCCTaGACGCGACCCTCGGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: LVSSNTRPQREQIRYGHWRTSAP*TRPSAP Trigger: GGGAGCCGAGGGTCGCGTGCAGGGGGCACTCGTGCG...CCAGTGGCCATATCTTATCTGTTCCCTTTGAGGTCTGGTGTTAGAGCTAACTAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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| CDS-3UTR GCA 90 bp | GCTCTCTCAGTGAGTGATCTGGAGAAAAGTCATGTACACCATAAACCCACATGGCACTCGGCGCACGAGTaGCCCCTGCACGCGACCCTC | + |
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Preference number: 4 (lower is better) Translates to: ALSVSDLEKSHVHHKPTWHSAHE*PLHATL Trigger: GAGGGTCGCGTGCAGGGGGCACTCGTGCGCCGAGTG...CCATGTGGGTTTATGGTGTACATGACTTTTCTCCAGATCACTCACTGAGAGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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| CDS-3UTR GCA 90 bp | TTTGGACCTTCGTCTGGCCAGAGACCCTGCACATCCCACTGTCAGGGTAGCCAGAGCTCGGATTGGCCTTaGCTGCACAATCACATCACC | + |
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Preference number: 4 (lower is better) Translates to: FGPSSGQRPCTSHCQGSQSSDWP*LHNHIT Trigger: GGTGATGTGATTGTGCAGGCAAGGCCAATCCGAGCT...CTGGCTACCCTGACAGTGGGATGTGCAGGGTCTCTGGCCAGACGAAGGTCCAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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| CDS-3UTR GCA 90 bp | AGGACTCTTCCCATCCTCGTGATCAGAGGAGACTTCCTCGTCCCCCTTCCAATACCTGTTGCCACAGGCTaGGGATGTGCACAGACTGGG | + |
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Preference number: 4 (lower is better) Translates to: RTLPILVIRGDFLVPLPIPVATG*GCAQTG Trigger: CCCAGTCTGTGCACATCCGCAGCCTGTGGCAACAGG...TATTGGAAGGGGGACGAGGAAGTCTCCTCTGATCACGAGGATGGGAAGAGTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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| CDS-3UTR CCA 90 bp | GACTCTTCCCATCCTCGTGATCAGAGGAGACTTCCTCGTCCCCCTTCCAATAAAAGCGGGAAGCGCCGTTaGTCCTTGGCGCGCAGATAC | + |
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Preference number: 4 (lower is better) Translates to: DSSHPRDQRRLPRPPSNKSGKRR*SLARRY Trigger: GTATCTGCGCGCCAAGGACCAACGGCGCTTCCCGCT...TTTATTGGAAGGGGGACGAGGAAGTCTCCTCTGATCACGAGGATGGGAAGAGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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| CDS-3UTR GCA 90 bp | GGGAATCCAATGAGAGAAGGAAGGAAGCTAGTAACTATACGAAAATGCCTGCCACACTCGGCGCACGAGTaGCCCCTGCACGCGACCCTC | + |
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Preference number: 4 (lower is better) Translates to: GNPMREGRKLVTIRKCLPHSAHE*PLHATL Trigger: GAGGGTCGCGTGCAGGGGGCACTCGTGCGCCGAGTG...TGGCAGGCATTTTCGTATAGTTACTAGCTTCCTTCCTTCTCTCATTGGATTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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| CDS-3UTR GCA 90 bp | AGGACTCTTCCCATCCTCGTGATCAGAGGAGACTTCCTCGTCCCCCTTCCAATACTGAAGGCTGGGAGATaGCAAAGGTGCGAAACGCTG | + |
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Preference number: 4 (lower is better) Translates to: RTLPILVIRGDFLVPLPILKAGR*QRCETL Trigger: CAGCGTTTCGCACCTTTGGCATCTCCCAGCCTTCAG...TATTGGAAGGGGGACGAGGAAGTCTCCTCTGATCACGAGGATGGGAAGAGTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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| 3UTR CAA 72 bp | CCACGAGGGCTGAGGCCTGGCTATGGGTATATCCACTaGTGTTTGTTTCATCCCAGCCCTAGCTCTCTCAGT | + |
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Preference number: 4 (lower is better) Translates to: PRGLRPGYGYIH*CLFHPSPSSLS Trigger: ACTGAGAGAGCTAGGGCTGGGATGAAACAAACACAAGTGGATATACCCATAGCCAGGCCTCAGCCCTCGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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| CDS-3UTR TCA 90 bp | GGGAATCCAATGAGAGAAGGAAGGAAGCTAGTAACTATACGAAAATGCCTGCCAGCACAGACTGGGCCCTaGGGCCCATGCAACAAGCGC | + |
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Preference number: 4 (lower is better) Translates to: GNPMREGRKLVTIRKCLPAQTGP*GPCNKR Trigger: GCGCTTGTTGCATGGGCCTCAGGGCCCAGTCTGTGC...TGGCAGGCATTTTCGTATAGTTACTAGCTTCCTTCCTTCTCTCATTGGATTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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| CDS-3UTR GCA 90 bp | ATAAGATATGGCCACTGGGAATCCAATGAGAGAAGGAAGGAAGCTAGTAACTATCCGCCTCCAGCAGGGTaGGCCAGTGCGAACGGGTGC | + |
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Preference number: 4 (lower is better) Translates to: IRYGHWESNERRKEASNYPPPAG*ASANGC Trigger: GCACCCGTTCGCACTGGCGCACCCTGCTGGAGGCGG...ATAGTTACTAGCTTCCTTCCTTCTCTCATTGGATTCCCAGTGGCCATATCTTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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| CDS-3UTR GCA 90 bp | ACCATAAACCCACATGGAAAACCCCTTTGGGTTCTTTCATGTTCTGTCCTGCAGAAAGCCGCCGCCACCTaGGTAGGCAGGGTAAACGGG | + |
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Preference number: 4 (lower is better) Translates to: TINPHGKPLWVLSCSVLQKAAAT*VGRVNG Trigger: CCCGTTTACCCTGCCTACGCAGGTGGCGGCGGCTTT...CTGCAGGACAGAACATGAAAGAACCCAAAGGGGTTTTCCATGTGGGTTTATGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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| CDS-3UTR CCA 90 bp | GCTCTCTCAGTGAGTGATCTGGAGAAAAGTCATGTACACCATAAACCCACATGGAGCGGGAAGCGCCGTTaGTCCTTGGCGCGCAGATAC | + |
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Preference number: 4 (lower is better) Translates to: ALSVSDLEKSHVHHKPTWSGKRR*SLARRY Trigger: GTATCTGCGCGCCAAGGACCAACGGCGCTTCCCGCT...CCATGTGGGTTTATGGTGTACATGACTTTTCTCCAGATCACTCACTGAGAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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| CDS-3UTR CCA 90 bp | GCTCTCTCAGTGAGTGATCTGGAGAAAAGTCATGTACACCATAAACCCACATGGCAGAGCCCGCCCCCTTaGGCACGCCCAACAAGAACA | + |
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Preference number: 4 (lower is better) Translates to: ALSVSDLEKSHVHHKPTWQSPPP*ARPTRT Trigger: TGTTCTTGTTGGGCGTGCCCAAGGGGGCGGGCTCTG...CCATGTGGGTTTATGGTGTACATGACTTTTCTCCAGATCACTCACTGAGAGAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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| CDS-3UTR GCA 90 bp | GCTCTCTCAGTGAGTGATCTGGAGAAAAGTCATGTACACCATAAACCCACATGGCCTGTTGCCACAGGCTaGGGATGTGCACAGACTGGG | + |
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Preference number: 4 (lower is better) Translates to: ALSVSDLEKSHVHHKPTWPVATG*GCAQTG Trigger: CCCAGTCTGTGCACATCCGCAGCCTGTGGCAACAGG...CCATGTGGGTTTATGGTGTACATGACTTTTCTCCAGATCACTCACTGAGAGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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| CDS-3UTR TCA 90 bp | ACCTATGCCCACAGTGACAGCGTGCCATGTGCTGCCACTGGGCTGTTTGTACTAGCCCAAGATAGAAAGTaGATCTCCTTCAGCGTTAGA | + |
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Preference number: 4 (lower is better) Translates to: TYAHSDSVPCAATGLFVLAQDRK*ISFSVR Trigger: TCTAACGCTGAAGGAGATTCACTTTCTATCTTGGGC...TAGTACAAACAGCCCAGTGGCAGCACATGGCACGCTGTCACTGTGGGCATAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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| CDS-3UTR GCA 90 bp | ACCTATGCCCACAGTGACAGCGTGCCATGTGCTGCCACTGGGCTGTTTGTACTAAGCGCTGCAAACACATaGCTAGAAAGACATCGTCTA | + |
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Preference number: 4 (lower is better) Translates to: TYAHSDSVPCAATGLFVLSAANT*LERHRL Trigger: TAGACGATGTCTTTCTAGGCATGTGTTTGCAGCGCT...TAGTACAAACAGCCCAGTGGCAGCACATGGCACGCTGTCACTGTGGGCATAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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| CDS-3UTR GCA 90 bp | ATAAGATATGGCCACTGGGAATCCAATGAGAGAAGGAAGGAAGCTAGTAACTATAAAGCCGCCGCCACCTaGGTAGGCAGGGTAAACGGG | + |
|
Preference number: 4 (lower is better) Translates to: IRYGHWESNERRKEASNYKAAAT*VGRVNG Trigger: CCCGTTTACCCTGCCTACGCAGGTGGCGGCGGCTTT...ATAGTTACTAGCTTCCTTCCTTCTCTCATTGGATTCCCAGTGGCCATATCTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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| CDS-3UTR CCA 90 bp | GATATGGCCACTGGGAATCCAATGAGAGAAGGAAGGAAGCTAGTAACTATACGAGGTGCAGCTGAAGGCTaGGAGATGCCAAAGGTGCGA | + |
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Preference number: 4 (lower is better) Translates to: DMATGNPMREGRKLVTIRGAAEG*EMPKVR Trigger: TCGCACCTTTGGCATCTCCCAGCCTTCAGCTGCACC...TCGTATAGTTACTAGCTTCCTTCCTTCTCTCATTGGATTCCCAGTGGCCATATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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| CDS-3UTR CCA 90 bp | GGGAATCCAATGAGAGAAGGAAGGAAGCTAGTAACTATACGAAAATGCCTGCCAGGTGCAGCTGAAGGCTaGGAGATGCCAAAGGTGCGA | + |
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Preference number: 4 (lower is better) Translates to: GNPMREGRKLVTIRKCLPGAAEG*EMPKVR Trigger: TCGCACCTTTGGCATCTCCCAGCCTTCAGCTGCACC...TGGCAGGCATTTTCGTATAGTTACTAGCTTCCTTCCTTCTCTCATTGGATTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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| CDS-3UTR GCA 90 bp | GATATGGCCACTGGGAATCCAATGAGAGAAGGAAGGAAGCTAGTAACTATACGACCAGAGCAGAATGTCTaGATAAGCTCGGCTCTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: DMATGNPMREGRKLVTIRPEQNV*ISSALR Trigger: GCGGAGAGCCGAGCTTATGCAGACATTCTGCTCTGG...TCGTATAGTTACTAGCTTCCTTCCTTCTCTCATTGGATTCCCAGTGGCCATATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
||
| CDS-3UTR GCA 90 bp | CCCCTTTGGGTTCTTTCATGTTCTGTCCTGCAGCTGAGTAAGAGAAGTTTGATACCAGAGCAGAATGTCTaGATAAGCTCGGCTCTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: PLWVLSCSVLQLSKRSLIPEQNV*ISSALR Trigger: GCGGAGAGCCGAGCTTATGCAGACATTCTGCTCTGG...TATCAAACTTCTCTTACTCAGCTGCAGGACAGAACATGAAAGAACCCAAAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
||
| CDS-3UTR CCA 90 bp | AGGACTCTTCCCATCCTCGTGATCAGAGGAGACTTCCTCGTCCCCCTTCCAATAGAAAGACATCGTCTATaGGAAAGAGCTCAACTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RTLPILVIRGDFLVPLPIERHRL*ERAQLV Trigger: CACAAGTTGAGCTCTTTCCCATAGACGATGTCTTTC...TATTGGAAGGGGGACGAGGAAGTCTCCTCTGATCACGAGGATGGGAAGAGTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
||
| CDS-3UTR TCA 90 bp | ACCATAAACCCACATGGAAAACCCCTTTGGGTTCTTTCATGTTCTGTCCTGCAGGCCCAAGATAGAAAGTaGATCTCCTTCAGCGTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: TINPHGKPLWVLSCSVLQAQDRK*ISFSVR Trigger: TCTAACGCTGAAGGAGATTCACTTTCTATCTTGGGC...CTGCAGGACAGAACATGAAAGAACCCAAAGGGGTTTTCCATGTGGGTTTATGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
||
| CDS-3UTR GCA 90 bp | ATAAGATATGGCCACTGGGAATCCAATGAGAGAAGGAAGGAAGCTAGTAACTATAGCTCGGATTGGCCTTaGCTGCACAATCACATCACC | + |
|
Preference number: 4 (lower is better) Translates to: IRYGHWESNERRKEASNYSSDWP*LHNHIT Trigger: GGTGATGTGATTGTGCAGGCAAGGCCAATCCGAGCT...ATAGTTACTAGCTTCCTTCCTTCTCTCATTGGATTCCCAGTGGCCATATCTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
||
| CDS-3UTR GCA 90 bp | GCTCTCTCAGTGAGTGATCTGGAGAAAAGTCATGTACACCATAAACCCACATGGAGCGCTGCAAACACATaGCTAGAAAGACATCGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: ALSVSDLEKSHVHHKPTWSAANT*LERHRL Trigger: TAGACGATGTCTTTCTAGGCATGTGTTTGCAGCGCT...CCATGTGGGTTTATGGTGTACATGACTTTTCTCCAGATCACTCACTGAGAGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
||
| CDS-3UTR GCA 90 bp | GCTCTCTCAGTGAGTGATCTGGAGAAAAGTCATGTACACCATAAACCCACATGGGTGCACGAACACATCTaGATCGCCCTTAAAAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: ALSVSDLEKSHVHHKPTWVHEHI*IALKNK Trigger: TTTGTTTTTAAGGGCGATGCAGATGTGTTCGTGCAC...CCATGTGGGTTTATGGTGTACATGACTTTTCTCCAGATCACTCACTGAGAGAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
||
| CDS-3UTR GCA 90 bp | TTAGTTAGCTCTAACACCAGACCTCAAAGGGAACAGATAAGATATGGCCACTGGGTGCACGAACACATCTaGATCGCCCTTAAAAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: LVSSNTRPQREQIRYGHWVHEHI*IALKNK Trigger: TTTGTTTTTAAGGGCGATGCAGATGTGTTCGTGCAC...CCAGTGGCCATATCTTATCTGTTCCCTTTGAGGTCTGGTGTTAGAGCTAACTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
||
| CDS-3UTR GCA 90 bp | TTTGTACTAAAATGTGAGCTGTTGATTTCCTTGAAGCTGGAGTTGAAGAATATGCTGAAGGCTGGGAGATaGCAAAGGTGCGAAACGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FVLKCELLISLKLELKNMLKAGR*QRCETL Trigger: CAGCGTTTCGCACCTTTGGCATCTCCCAGCCTTCAG...CATATTCTTCAACTCCAGCTTCAAGGAAATCAACAGCTCACATTTTAGTACAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
||
| 3UTR CAA 72 bp | GGGCTGTTTGTACTAAAATGTGAGCTGTTGATTTCCTaGAAGCTGGAGTTGAAGAATATGAGCAATCTTATA | + |
|
Preference number: 4 (lower is better) Translates to: GLFVLKCELLIS*KLELKNMSNLI Trigger: TATAAGATTGCTCATATTCTTCAACTCCAGCTTCAAGGAAATCAACAGCTCACATTTTAGTACAAACAGCCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
||
| CDS GCA 90 bp | AAGCTCGGCTCTCCGCCTCCAGCAGGGTGCGCCAGTGCGAACGGGTaGCTGCCCCGCCAGAGCCCGCCCCCTTGGGCACGCCCAACAAGA | + |
|
Preference number: 5 (lower is better) Translates to: KLGSPPPAGCASANG*LPRQSPPPWARPTR Trigger: TCTTGTTGGGCGTGCCCAAGGGGGCGGGCTCTGGCGGGGCAGGCACCCGTTCGCACTGGCGCACCCTGCTGGAGGCGGAGAGCCGAGCTT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
||
| CDS CCA 90 bp | TGCTCGGAGGCTAGGAGTGGGCCGCGGGAGCTGGGGTCCTCGCGCTaGTGGTCTGGTCGTGGGGGATGCCACGTCGCGCTGCGCGTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: CSEARSGPRELGSSR*WSGRGGCHVALRVE Trigger: CTCTACGCGCAGCGCGACGTGGCATCCCCCACGACCAGACCACCAGCGCGAGGACCCCAGCTCCCGCGGCCCACTCCTAGCCTCCGAGCA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 ENSMUST00000161745.3 |
||
| CDS CCA 90 bp | TTAGGGAGCTCGCGTGCTCGGAGGCTAGGAGTGGGCCGCGGGAGCTaGGGTCCTCGCGCTGGTGGTCTGGTCGTGGGGGATGCCACGTCG | + |
|
Preference number: 5 (lower is better) Translates to: LGSSRARRLGVGRGS*GPRAGGLVVGDATS Trigger: CGACGTGGCATCCCCCACGACCAGACCACCAGCGCGAGGACCCCAGCTCCCGCGGCCCACTCCTAGCCTCCGAGCACGCGAGCTCCCTAA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 ENSMUST00000161745.3 |
||
| CDS GCA 90 bp | CCCTTGGGCACGCCCAACAAGAACACTCGGCGCACGAGTGCCCCCTaGACGCGACCCTCGGCTCCCCAAGTCTGGCGAACGGCTTCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: PLGTPNKNTRRTSAP*TRPSAPQVWRTASR Trigger: GCGGGAAGCCGTTCGCCAGACTTGGGGAGCCGAGGGTCGCGTGCAGGGGGCACTCGTGCGCCGAGTGTTCTTGTTGGGCGTGCCCAAGGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
||
| CDS CCA 90 bp | CGGCGCACGAGTGCCCCCTGCACGCGACCCTCGGCTCCCCAAGTCTaGCGAACGGCTTCCCGCCGCTCAAAGTCCGCAGCCACAGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: RRTSAPCTRPSAPQV*RTASRRSKSAATDL Trigger: CAAGTCTGTGGCTGCGGACTTTGAGCGGCGGGAAGCCGTTCGCCAGACTTGGGGAGCCGAGGGTCGCGTGCAGGGGGCACTCGTGCGCCG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
||
| CDS GCA 90 bp | AGCCACAGACTTGACAGCGATGAGCAGGTCCGGCGAACCGCCGGATaGGCCGTCGCTGCGGCATTTGCGACGCTGGTTAATGAGCAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: SHRLDSDEQVRRTAG*AVAAAFATLVNEQR Trigger: CCGCTGCTCATTAACCAGCGTCGCAAATGCCGCAGCGACGGCGCATCCGGCGGTTCGCCGGACCTGCTCATCGCTGTCAAGTCTGTGGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 ENSMUST00000161745.3 |
||
| CDS CCA 90 bp | CTGCGGCATTTGCGACGCTGGTTAATGAGCAGCGGGAAGCGCCGTTaGTCCTTGGCGCGCAGATACCCGCCGAAGTCAAAGGGGTCCGTA | + |
|
Preference number: 5 (lower is better) Translates to: LRHLRRWLMSSGKRR*SLARRYPPKSKGSV Trigger: TACGGACCCCTTTGACTTCGGCGGGTATCTGCGCGCCAAGGACCAACGGCGCTTCCCGCTGCTCATTAACCAGCGTCGCAAATGCCGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 ENSMUST00000161745.3 |
||
| CDS-3UTR CAA 90 bp | ACCTATGCCCACAGTGACAGCGTGCCATGTGCTGCCACTGGGCTGTTTGTACTACCAGAGCCCGCCCCCTaGGGCACGCCCAACAAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: TYAHSDSVPCAATGLFVLPEPAP*GTPNKN Trigger: GTTCTTGTTGGGCGTGCCCAAGGGGGCGGGCTCTGG...TAGTACAAACAGCCCAGTGGCAGCACATGGCACGCTGTCACTGTGGGCATAGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
||
| CDS CCA 90 bp | CCATTGGAAGGGACCTGTTGCCACAGGCTGCGGATGTGCACAGACTaGGCCCTGAGGCCCATGCAACAAGCGCCACATAAGCCAGATGTC | + |
|
Preference number: 5 (lower is better) Translates to: PLEGTCCHRLRMCTD*ALRPMQQAPHKPDV Trigger: GACATCTGGCTTATGTGGCGCTTGTTGCATGGGCCTCAGGGCCCAGTCTGTGCACATCCGCAGCCTGTGGCAACAGGTCCCTTCCAATGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
||
| CDS-3UTR CAA 90 bp | GCCAGGACTCTTCCCATCCTCGTGATCAGAGGAGACTTCCTCGTCCCCCTTCCACCGTCGCTGCGGCATTaGCGACGCTGGTTAATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: ARTLPILVIRGDFLVPLPPSLRH*RRWLMS Trigger: GCTCATTAACCAGCGTCGCAAATGCCGCAGCGACGG...TGGAAGGGGGACGAGGAAGTCTCCTCTGATCACGAGGATGGGAAGAGTCCTGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
||
| CDS TCA 90 bp | GGTGCAGCTGAAGGCTGGGAGATGCCAAAGGTGCGAAACGCTGGATaGGGCTCTGGTGTGAGCCGCAAGCGCTGCAAACACATGCCTAGA | + |
|
Preference number: 5 (lower is better) Translates to: GAAEGWEMPKVRNAG*GSGVSRKRCKHMPR Trigger: TCTAGGCATGTGTTTGCAGCGCTTGCGGCTCACACCAGAGCCTCATCCAGCGTTTCGCACCTTTGGCATCTCCCAGCCTTCAGCTGCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
||
| CDS GCA 90 bp | TCACCCGCAAGAAGGTCCTGTGCGGGATCCCGGAGCTCCAGAAACTaGAGCAGGTTCCTCACGTGCACGAACACATCTGCATCGCCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: SPARRSCAGSRSSRN*SRFLTCTNTSASPL Trigger: TAAGGGCGATGCAGATGTGTTCGTGCACGTGAGGAACCTGCTGCAGTTTCTGGAGCTCCGGGATCCCGCACAGGACCTTCTTGCGGGTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
||
| CDS GCA 90 bp | GCCCTGAGGCCCATGCAACAAGCGCCACATAAGCCAGATGTCAGCTaGAGACAGCCCATGTACTACCACCAGTTCTCGGTAGAAACAGGG | + |
|
Preference number: 5 (lower is better) Translates to: ALRPMQQAPHKPDVS*RQPMYYHQFSVETG Trigger: CCCTGTTTCTACCGAGAACTGGTGGTAGTACATGGGCTGTCTGCAGCTGACATCTGGCTTATGTGGCGCTTGTTGCATGGGCCTCAGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
||
| CDS GCA 90 bp | CTAAGAATTCCATTGGAAGGGACCTGTTGCCACAGGCTGCGGATGTaGACAGACTGGGCCCTGAGGCCCATGCAACAAGCGCCACATAAG | + |
|
Preference number: 5 (lower is better) Translates to: LRIPLEGTCCHRLRM*TDWALRPMQQAPHK Trigger: CTTATGTGGCGCTTGTTGCATGGGCCTCAGGGCCCAGTCTGTGCACATCCGCAGCCTGTGGCAACAGGTCCCTTCCAATGGAATTCTTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
||
| CDS TCA 90 bp | GCTGGGAGATGCCAAAGGTGCGAAACGCTGGATGAGGCTCTGGTGTaGGCCGCAAGCGCTGCAAACACATGCCTAGAAAGACATCGTCTA | + |
|
Preference number: 5 (lower is better) Translates to: AGRCQRCETLDEALV*AASAANTCLERHRL Trigger: TAGACGATGTCTTTCTAGGCATGTGTTTGCAGCGCTTGCGGCTCACACCAGAGCCTCATCCAGCGTTTCGCACCTTTGGCATCTCCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
||
| CDS TCA 90 bp | TTCTCGGTAGAAACAGGGGTCAAAGGTTCGAAGATGAGGTGCAGCTaGAGGCTGGGAGATGCCAAAGGTGCGAAACGCTGGATGAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: FSVETGVKGSKMRCS*RLGDAKGAKRWMRL Trigger: GAGCCTCATCCAGCGTTTCGCACCTTTGGCATCTCCCAGCCTTCAGCTGCACCTCATCTTCGAACCTTTGACCCCTGTTTCTACCGAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
||
| CDS-3UTR CAA 90 bp | GGGAATCCAATGAGAGAAGGAAGGAAGCTAGTAACTATACGAAAATGCCTGCCACCAGAGCCCGCCCCCTaGGGCACGCCCAACAAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: GNPMREGRKLVTIRKCLPPEPAP*GTPNKN Trigger: GTTCTTGTTGGGCGTGCCCAAGGGGGCGGGCTCTGG...TGGCAGGCATTTTCGTATAGTTACTAGCTTCCTTCCTTCTCTCATTGGATTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
||
| CDS GCA 90 bp | TGTGCGGGATCCCGGAGCTCCAGAAACTGCAGCAGGTTCCTCACGTaGACGAACACATCTGCATCGCCCTTAAAAACAAAGTGTACATCT | + |
|
Preference number: 5 (lower is better) Translates to: CAGSRSSRNCSRFLT*TNTSASPLKTKCTS Trigger: AGATGTACACTTTGTTTTTAAGGGCGATGCAGATGTGTTCGTGCACGTGAGGAACCTGCTGCAGTTTCTGGAGCTCCGGGATCCCGCACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
||
| CDS-3UTR CAA 90 bp | GGGAATCCAATGAGAGAAGGAAGGAAGCTAGTAACTATACGAAAATGCCTGCCAATTGGAAGGGACCTGTaGCCACAGGCTGCGGATGTG | + |
|
Preference number: 5 (lower is better) Translates to: GNPMREGRKLVTIRKCLPIGRDL*PQAADV Trigger: CACATCCGCAGCCTGTGGCAACAGGTCCCTTCCAAT...TGGCAGGCATTTTCGTATAGTTACTAGCTTCCTTCCTTCTCTCATTGGATTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
||
| CDS-3UTR CAA 90 bp | CCCCTTTGGGTTCTTTCATGTTCTGTCCTGCAGCTGAGTAAGAGAAGTTTGATAATTGGAAGGGACCTGTaGCCACAGGCTGCGGATGTG | + |
|
Preference number: 5 (lower is better) Translates to: PLWVLSCSVLQLSKRSLIIGRDL*PQAADV Trigger: CACATCCGCAGCCTGTGGCAACAGGTCCCTTCCAAT...TATCAAACTTCTCTTACTCAGCTGCAGGACAGAACATGAAAGAACCCAAAGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
||
| CDS-3UTR CAA 90 bp | ATAAGATATGGCCACTGGGAATCCAATGAGAGAAGGAAGGAAGCTAGTAACTATCCGTCGCTGCGGCATTaGCGACGCTGGTTAATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: IRYGHWESNERRKEASNYPSLRH*RRWLMS Trigger: GCTCATTAACCAGCGTCGCAAATGCCGCAGCGACGG...ATAGTTACTAGCTTCCTTCCTTCTCTCATTGGATTCCCAGTGGCCATATCTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
||
| CDS TCA 90 bp | ATGCTGAGGCCCAAGATAGAAAGTGAATCTCCTTCAGCGTTAGATTaGAAAAGGTGTCTTCGAAAGCCCAGAGCAGAATGTCTGCATAAG | + |
|
Preference number: 5 (lower is better) Translates to: MLRPKIESESPSALD*KRCLRKPRAECLHK Trigger: CTTATGCAGACATTCTGCTCTGGGCTTTCGAAGACACCTTTTTCAATCTAACGCTGAAGGAGATTCACTTTCTATCTTGGGCCTCAGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
||
| CDS TCA 90 bp | ACAAAGTGTACATCTGGACAGAATGCTGAGGCCCAAGATAGAAAGTaGATCTCCTTCAGCGTTAGATTGAAAAAGGTGTCTTCGAAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: TKCTSGQNAEAQDRK*ISFSVRLKKVSSKA Trigger: GGCTTTCGAAGACACCTTTTTCAATCTAACGCTGAAGGAGATTCACTTTCTATCTTGGGCCTCAGCATTCTGTCCAGATGTACACTTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
||
| CDS-3UTR CAA 90 bp | CCCCTTTGGGTTCTTTCATGTTCTGTCCTGCAGCTGAGTAAGAGAAGTTTGATATCCTTCAGCGTTAGATaGAAAAAGGTGTCTTCGAAA | + |
|
Preference number: 5 (lower is better) Translates to: PLWVLSCSVLQLSKRSLISFSVR*KKVSSK Trigger: TTTCGAAGACACCTTTTTCAATCTAACGCTGAAGGA...TATCAAACTTCTCTTACTCAGCTGCAGGACAGAACATGAAAGAACCCAAAGGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
||
| CDS CCA 72 bp | TCGCGTGCTCGGAGGCTAGGAGTGGGCCGCGGGAGCTaGGGTCCTCGCGCTGGTGGTCTGGTCGTGGGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: SRARRLGVGRGS*GPRAGGLVVGD Trigger: ATCCCCCACGACCAGACCACCAGCGCGAGGACCCCAGCTCCCGCGGCCCACTCCTAGCCTCCGAGCACGCGA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 ENSMUST00000161745.3 |
||
| CDS CCA 72 bp | AGTGCCCCCTGCACGCGACCCTCGGCTCCCCAAGTCTaGCGAACGGCTTCCCGCCGCTCAAAGTCCGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SAPCTRPSAPQV*RTASRRSKSAA Trigger: GGCTGCGGACTTTGAGCGGCGGGAAGCCGTTCGCCAGACTTGGGGAGCCGAGGGTCGCGTGCAGGGGGCACT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
||
| CDS CAA 90 bp | GTCTGGCGAACGGCTTCCCGCCGCTCAAAGTCCGCAGCCACAGACTaGACAGCGATGAGCAGGTCCGGCGAACCGCCGGATGCGCCGTCG | + |
|
Preference number: 6 (lower is better) Translates to: VWRTASRRSKSAATD*TAMSRSGEPPDAPS Trigger: CGACGGCGCATCCGGCGGTTCGCCGGACCTGCTCATCGCTGTCAAGTCTGTGGCTGCGGACTTTGAGCGGCGGGAAGCCGTTCGCCAGAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 ENSMUST00000161745.3 |
||
| CDS GCA 72 bp | ACGCCCAACAAGAACACTCGGCGCACGAGTGCCCCCTaGACGCGACCCTCGGCTCCCCAAGTCTGGCGAACG | + |
|
Preference number: 6 (lower is better) Translates to: TPNKNTRRTSAP*TRPSAPQVWRT Trigger: CGTTCGCCAGACTTGGGGAGCCGAGGGTCGCGTGCAGGGGGCACTCGTGCGCCGAGTGTTCTTGTTGGGCGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
||
| CDS GCA 72 bp | CTTGGGCACGCCCAACAAGAACACTCGGCGCACGAGTaGCCCCTGCACGCGACCCTCGGCTCCCCAAGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: LGHAQQEHSAHE*PLHATLGSPSL Trigger: CAGACTTGGGGAGCCGAGGGTCGCGTGCAGGGGGCACTCGTGCGCCGAGTGTTCTTGTTGGGCGTGCCCAAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
||
| CDS CAA 72 bp | TCCGGCGAACCGCCGGATGCGCCGTCGCTGCGGCATTaGCGACGCTGGTTAATGAGCAGCGGGAAGCGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: SGEPPDAPSLRH*RRWLMSSGKRR Trigger: ACGGCGCTTCCCGCTGCTCATTAACCAGCGTCGCAAATGCCGCAGCGACGGCGCATCCGGCGGTTCGCCGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 ENSMUST00000161745.3 |
||
| CDS CCA 72 bp | CCGCCGGATGCGCCGTCGCTGCGGCATTTGCGACGCTaGTTAATGAGCAGCGGGAAGCGCCGTTGGTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: PPDAPSLRHLRR*LMSSGKRRWSL Trigger: CAAGGACCAACGGCGCTTCCCGCTGCTCATTAACCAGCGTCGCAAATGCCGCAGCGACGGCGCATCCGGCGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 ENSMUST00000161745.3 |
||
| CDS CAA 90 bp | ATGAGCAGGTCCGGCGAACCGCCGGATGCGCCGTCGCTGCGGCATTaGCGACGCTGGTTAATGAGCAGCGGGAAGCGCCGTTGGTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: MSRSGEPPDAPSLRH*RRWLMSSGKRRWSL Trigger: CAAGGACCAACGGCGCTTCCCGCTGCTCATTAACCAGCGTCGCAAATGCCGCAGCGACGGCGCATCCGGCGGTTCGCCGGACCTGCTCAT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 ENSMUST00000161745.3 |
||
| CDS CAA 72 bp | ACGGCTTCCCGCCGCTCAAAGTCCGCAGCCACAGACTaGACAGCGATGAGCAGGTCCGGCGAACCGCCGGAT | + |
|
Preference number: 6 (lower is better) Translates to: TASRRSKSAATD*TAMSRSGEPPD Trigger: ATCCGGCGGTTCGCCGGACCTGCTCATCGCTGTCAAGTCTGTGGCTGCGGACTTTGAGCGGCGGGAAGCCGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 ENSMUST00000161745.3 |
||
| CDS GCA 72 bp | CTTGACAGCGATGAGCAGGTCCGGCGAACCGCCGGATaGGCCGTCGCTGCGGCATTTGCGACGCTGGTTAAT | + |
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Preference number: 6 (lower is better) Translates to: LDSDEQVRRTAG*AVAAAFATLVN Trigger: ATTAACCAGCGTCGCAAATGCCGCAGCGACGGCGCATCCGGCGGTTCGCCGGACCTGCTCATCGCTGTCAAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 ENSMUST00000161745.3 |
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| CDS GCA 72 bp | GAGCGTGGCTCCCGAAAGAACAAAGCCGCCGCCACCTaGGTAGGCAGGGTAAACGGGCAGTCCATACACAGC | + |
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Preference number: 6 (lower is better) Translates to: ERGSRKNKAAAT*VGRVNGQSIHS Trigger: GCTGTGTATGGACTGCCCGTTTACCCTGCCTACGCAGGTGGCGGCGGCTTTGTTCTTTCGGGAGCCACGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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| CDS GCA 72 bp | CCATTGGAAGGGACCTGTTGCCACAGGCTGCGGATGTaGACAGACTGGGCCCTGAGGCCCATGCAACAAGCG | + |
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Preference number: 6 (lower is better) Translates to: PLEGTCCHRLRM*TDWALRPMQQA Trigger: CGCTTGTTGCATGGGCCTCAGGGCCCAGTCTGTGCACATCCGCAGCCTGTGGCAACAGGTCCCTTCCAATGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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| CDS CCA 72 bp | GGGACCTGTTGCCACAGGCTGCGGATGTGCACAGACTaGGCCCTGAGGCCCATGCAACAAGCGCCACATAAG | + |
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Preference number: 6 (lower is better) Translates to: GTCCHRLRMCTD*ALRPMQQAPHK Trigger: CTTATGTGGCGCTTGTTGCATGGGCCTCAGGGCCCAGTCTGTGCACATCCGCAGCCTGTGGCAACAGGTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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| CDS CCA 72 bp | TTGCGACGCTGGTTAATGAGCAGCGGGAAGCGCCGTTaGTCCTTGGCGCGCAGATACCCGCCGAAGTCAAAG | + |
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Preference number: 6 (lower is better) Translates to: LRRWLMSSGKRR*SLARRYPPKSK Trigger: CTTTGACTTCGGCGGGTATCTGCGCGCCAAGGACCAACGGCGCTTCCCGCTGCTCATTAACCAGCGTCGCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 ENSMUST00000161745.3 |
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| CDS TCA 72 bp | GAAGGCTGGGAGATGCCAAAGGTGCGAAACGCTGGATaGGGCTCTGGTGTGAGCCGCAAGCGCTGCAAACAC | + |
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Preference number: 6 (lower is better) Translates to: EGWEMPKVRNAG*GSGVSRKRCKH Trigger: GTGTTTGCAGCGCTTGCGGCTCACACCAGAGCCTCATCCAGCGTTTCGCACCTTTGGCATCTCCCAGCCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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| CDS GCA 72 bp | AGAAGGTCCTGTGCGGGATCCCGGAGCTCCAGAAACTaGAGCAGGTTCCTCACGTGCACGAACACATCTGCA | + |
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Preference number: 6 (lower is better) Translates to: RRSCAGSRSSRN*SRFLTCTNTSA Trigger: TGCAGATGTGTTCGTGCACGTGAGGAACCTGCTGCAGTTTCTGGAGCTCCGGGATCCCGCACAGGACCTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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| CDS GCA 72 bp | GAAAAAGGTGTCTTCGAAAGCCCAGAGCAGAATGTCTaGATAAGCTCGGCTCTCCGCCTCCAGCAGGGTGCG | + |
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Preference number: 6 (lower is better) Translates to: EKGVFESPEQNV*ISSALRLQQGA Trigger: CGCACCCTGCTGGAGGCGGAGAGCCGAGCTTATGCAGACATTCTGCTCTGGGCTTTCGAAGACACCTTTTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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| CDS GCA 72 bp | AGGTTCGAAGATGAGGTGCAGCTGAAGGCTGGGAGATaGCAAAGGTGCGAAACGCTGGATGAGGCTCTGGTG | + |
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Preference number: 6 (lower is better) Translates to: RFEDEVQLKAGR*QRCETLDEALV Trigger: CACCAGAGCCTCATCCAGCGTTTCGCACCTTTGGCATCTCCCAGCCTTCAGCTGCACCTCATCTTCGAACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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| CDS TCA 72 bp | TGCCAAAGGTGCGAAACGCTGGATGAGGCTCTGGTGTaGGCCGCAAGCGCTGCAAACACATGCCTAGAAAGA | + |
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Preference number: 6 (lower is better) Translates to: CQRCETLDEALV*AASAANTCLER Trigger: TCTTTCTAGGCATGTGTTTGCAGCGCTTGCGGCTCACACCAGAGCCTCATCCAGCGTTTCGCACCTTTGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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| CDS TCA 72 bp | GAAACAGGGGTCAAAGGTTCGAAGATGAGGTGCAGCTaGAGGCTGGGAGATGCCAAAGGTGCGAAACGCTGG | + |
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Preference number: 6 (lower is better) Translates to: ETGVKGSKMRCS*RLGDAKGAKRW Trigger: CCAGCGTTTCGCACCTTTGGCATCTCCCAGCCTTCAGCTGCACCTCATCTTCGAACCTTTGACCCCTGTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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| CDS GCA 72 bp | AAGTACTTGCTGGCTCTAGCTCGGATTGGCCTTGCCTaGACAATCACATCACCCGCAAGAAGGTCCTGTGCG | + |
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Preference number: 6 (lower is better) Translates to: KYLLALARIGLA*TITSPARRSCA Trigger: CGCACAGGACCTTCTTGCGGGTGATGTGATTGTGCAGGCAAGGCCAATCCGAGCTAGAGCCAGCAAGTACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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| CDS CCA 72 bp | CCGGGGAATGAAGTACTTGCTGGCTCTAGCTCGGATTaGCCTTGCCTGCACAATCACATCACCCGCAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: PGNEVLAGSSSD*PCLHNHITRKK Trigger: CTTCTTGCGGGTGATGTGATTGTGCAGGCAAGGCCAATCCGAGCTAGAGCCAGCAAGTACTTCATTCCCCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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| CDS GCA 72 bp | CCCATGCAACAAGCGCCACATAAGCCAGATGTCAGCTaGAGACAGCCCATGTACTACCACCAGTTCTCGGTA | + |
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Preference number: 6 (lower is better) Translates to: PMQQAPHKPDVS*RQPMYYHQFSV Trigger: TACCGAGAACTGGTGGTAGTACATGGGCTGTCTGCAGCTGACATCTGGCTTATGTGGCGCTTGTTGCATGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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| CDS GCA 72 bp | AATGAAGTACTTGCTGGCTCTAGCTCGGATTGGCCTTaGCTGCACAATCACATCACCCGCAAGAAGGTCCTG | + |
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Preference number: 6 (lower is better) Translates to: NEVLAGSSSDWP*LHNHITRKKVL Trigger: CAGGACCTTCTTGCGGGTGATGTGATTGTGCAGGCAAGGCCAATCCGAGCTAGAGCCAGCAAGTACTTCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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| CDS GCA 72 bp | AAACTGCAGCAGGTTCCTCACGTGCACGAACACATCTaGATCGCCCTTAAAAACAAAGTGTACATCTGGACA | + |
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Preference number: 6 (lower is better) Translates to: KLQQVPHVHEHI*IALKNKVYIWT Trigger: TGTCCAGATGTACACTTTGTTTTTAAGGGCGATGCAGATGTGTTCGTGCACGTGAGGAACCTGCTGCAGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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| CDS TCA 72 bp | ACATCTGGACAGAATGCTGAGGCCCAAGATAGAAAGTaGATCTCCTTCAGCGTTAGATTGAAAAAGGTGTCT | + |
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Preference number: 6 (lower is better) Translates to: TSGQNAEAQDRK*ISFSVRLKKVS Trigger: AGACACCTTTTTCAATCTAACGCTGAAGGAGATTCACTTTCTATCTTGGGCCTCAGCATTCTGTCCAGATGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093217.9 ENSMUST00000136822.3 |
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