Pregenerated sensors for B3GNT7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079445Ensembl transcript IDs: ENSMUST00000113306.4, ENSMUST00000188695.2
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTCAGAGCCAGGAGCCATGCCTCGGCAGCTGACTCCAGGCAAGCCTaGGGCTGTGCTGAGGGCCTATGGAGAGAGAGCTCCTATCTTAGG | + |
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Preference number: 1 (lower is better) Translates to: VRARSHASAADSRQA*GCAEGLWRESSYLR Trigger: CCTAAGATAGGAGCTCTCTCTCCATAGGCCCTCAGCACAGCCCCAGGCTTGCCTGGAGTCAGCTGCCGAGGCATGGCTCCTGGCTCTGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| 3UTR CCA 90 bp | TCGGCAGCTGACTCCAGGCAAGCCTGGGGCTGTGCTGAGGGCCTATaGAGAGAGAGCTCCTATCTTAGGAGGTCCAGCAATGTGGGCCAG | + |
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Preference number: 1 (lower is better) Translates to: SAADSRQAWGCAEGL*RESSYLRRSSNVGQ Trigger: CTGGCCCACATTGCTGGACCTCCTAAGATAGGAGCTCTCTCTCCATAGGCCCTCAGCACAGCCCCAGGCTTGCCTGGAGTCAGCTGCCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| 3UTR GCA 90 bp | ACAGAGGGCCCAAACCCTTCACCTCCTGCAGGGGACCAAAGACAATaGCATGTATCCCCCGAGGACAAACGCACTGGTGGCTCAGCAACA | + |
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Preference number: 1 (lower is better) Translates to: TEGPNPSPPAGDQRQ*HVSPEDKRTGGSAT Trigger: TGTTGCTGAGCCACCAGTGCGTTTGTCCTCGGGGGATACATGGCATTGTCTTTGGTCCCCTGCAGGAGGTGAAGGGTTTGGGCCCTCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| 3UTR TCA 90 bp | AGAAGCAGCCACAGACCCATTGGGGCCAGGTCTAGCTCAGGTACCTaGGCAAATGTTCCTTTAGAGTCCACCAGGGCCTCCTACCAGGCT | + |
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Preference number: 1 (lower is better) Translates to: RSSHRPIGARSSSGT*ANVPLESTRASYQA Trigger: AGCCTGGTAGGAGGCCCTGGTGGACTCTAAAGGAACATTTGCTCAGGTACCTGAGCTAGACCTGGCCCCAATGGGTCTGTGGCTGCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| 3UTR TCA 90 bp | GGAGGGCTTGAAAGGCAGGGGGTGAGTGGTAAAGATGCTAGCTGCTaGAGGAAAGTGTACAGGAAAGAGGTACACCTCCCAAGGCCTCCT | + |
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Preference number: 1 (lower is better) Translates to: GGLERQGVSGKDASC*RKVYRKEVHLPRPP Trigger: AGGAGGCCTTGGGAGGTGTACCTCTTTCCTGTACACTTTCCTTCAGCAGCTAGCATCTTTACCACTCACCCCCTGCCTTTCAAGCCCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| 3UTR CCA 90 bp | CCAGGTTCTCGGATGACCTCCAGTCAGGGAAGTTCTGGCTATTCCTaGACCTCTTTCTGGGAATTTCTGGGAGTCCCTCTCTGGATCTCT | + |
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Preference number: 1 (lower is better) Translates to: PGSRMTSSQGSSGYS*TSFWEFLGVPLWIS Trigger: AGAGATCCAGAGAGGGACTCCCAGAAATTCCCAGAAAGAGGTCCAGGAATAGCCAGAACTTCCCTGACTGGAGGTCATCCGAGAACCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| 3UTR CCA 90 bp | ATGACCTCCAGTCAGGGAAGTTCTGGCTATTCCTGGACCTCTTTCTaGGAATTTCTGGGAGTCCCTCTCTGGATCTCTGTACCTCACCAC | + |
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Preference number: 1 (lower is better) Translates to: MTSSQGSSGYSWTSF*EFLGVPLWISVPHH Trigger: GTGGTGAGGTACAGAGATCCAGAGAGGGACTCCCAGAAATTCCCAGAAAGAGGTCCAGGAATAGCCAGAACTTCCCTGACTGGAGGTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| 3UTR CAA 90 bp | GGACACCTGTGGACCTGCACAGGCCTGAGCTCCCACAAAGGCTGCTaGACCCTCAGGGAGCCAGAGGCATTTCACAGGAAGGGGGCTTCC | + |
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Preference number: 2 (lower is better) Translates to: GHLWTCTGLSSHKGC*TLREPEAFHRKGAS Trigger: GGAAGCCCCCTTCCTGTGAAATGCCTCTGGCTCCCTGAGGGTCAAGCAGCCTTTGTGGGAGCTCAGGCCTGTGCAGGTCCACAGGTGTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| 3UTR CAA 90 bp | GGCCAGGGAGTCAGTATTGGTGAGGTGCCAAAGGTGAGACTTGGCTaGGACTATGCTCAAGGATCACTGTGCCTTGTGGGGGTGGGGGTG | + |
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Preference number: 2 (lower is better) Translates to: GQGVSIGEVPKVRLG*DYAQGSLCLVGVGV Trigger: CACCCCCACCCCCACAAGGCACAGTGATCCTTGAGCATAGTCCAAGCCAAGTCTCACCTTTGGCACCTCACCAATACTGACTCCCTGGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| 3UTR-3UTR CCA 90 bp | TTCTGGACAAGAGAAGTCAGAGCCAGGAGCCATGCCTCGGCAGCTGACTCCAGGCTGGGAGTCCCTCTCTaGATCTCTGTACCTCACCAC | + |
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Preference number: 2 (lower is better) Translates to: FWTREVRARSHASAADSRLGVPL*ISVPHH Trigger: GTGGTGAGGTACAGAGATCCAGAGAGGGACTCCCAG...CCTGGAGTCAGCTGCCGAGGCATGGCTCCTGGCTCTGACTTCTCTTGTCCAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| 3UTR-3UTR TCA 90 bp | ACCAGGGCCTCCTACCAGGCTAGAGAGGTCAGGCTAGAGGCCCAAGATAGGAGAATCCAGGTTCTCGGATaGCCTCCAGTCAGGGAAGTT | + |
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Preference number: 2 (lower is better) Translates to: TRASYQAREVRLEAQDRRIQVLG*PPVREV Trigger: AACTTCCCTGACTGGAGGTCATCCGAGAACCTGGAT...TCTCCTATCTTGGGCCTCTAGCCTGACCTCTCTAGCCTGGTAGGAGGCCCTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| 3UTR-3UTR TCA 90 bp | CTGCTGAAGGAAAGTGTACAGGAAAGAGGTACACCTCCCAAGGCCTCCTTCCAAAAGGGGGCTTCCCTGTaGGGACAAGAAGCAGCCACA | + |
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Preference number: 2 (lower is better) Translates to: LLKESVQERGTPPKASFQKGASL*GQEAAT Trigger: TGTGGCTGCTTCTTGTCCTCACAGGGAAGCCCCCTT...TTGGAAGGAGGCCTTGGGAGGTGTACCTCTTTCCTGTACACTTTCCTTCAGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| 3UTR-3UTR TCA 90 bp | CTGCTGAAGGAAAGTGTACAGGAAAGAGGTACACCTCCCAAGGCCTCCTTCCAAGGGAGTCAGTATTGGTaGGGTGCCAAAGGTGAGACT | + |
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Preference number: 2 (lower is better) Translates to: LLKESVQERGTPPKASFQGSQYW*GAKGET Trigger: AGTCTCACCTTTGGCACCTCACCAATACTGACTCCC...TTGGAAGGAGGCCTTGGGAGGTGTACCTCTTTCCTGTACACTTTCCTTCAGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| 3UTR-3UTR CCA 90 bp | TTCTGGACAAGAGAAGTCAGAGCCAGGAGCCATGCCTCGGCAGCTGACTCCAGGAGTTCTGGCTATTCCTaGACCTCTTTCTGGGAATTT | + |
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Preference number: 2 (lower is better) Translates to: FWTREVRARSHASAADSRSSGYS*TSFWEF Trigger: AAATTCCCAGAAAGAGGTCCAGGAATAGCCAGAACT...CCTGGAGTCAGCTGCCGAGGCATGGCTCCTGGCTCTGACTTCTCTTGTCCAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| 3UTR CCA 72 bp | AGGAGCCATGCCTCGGCAGCTGACTCCAGGCAAGCCTaGGGCTGTGCTGAGGGCCTATGGAGAGAGAGCTCC | + |
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Preference number: 3 (lower is better) Translates to: RSHASAADSRQA*GCAEGLWRESS Trigger: GGAGCTCTCTCTCCATAGGCCCTCAGCACAGCCCCAGGCTTGCCTGGAGTCAGCTGCCGAGGCATGGCTCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| 3UTR GCA 72 bp | GGTCCAGCAATGTGGGCCAGGGGACACCTGTGGACCTaGACAGGCCTGAGCTCCCACAAAGGCTGCTTGACC | + |
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Preference number: 3 (lower is better) Translates to: GPAMWARGHLWT*TGLSSHKGCLT Trigger: GGTCAAGCAGCCTTTGTGGGAGCTCAGGCCTGTGCAGGTCCACAGGTGTCCCCTGGCCCACATTGCTGGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| 3UTR CCA 72 bp | TTAGGAGGTCCAGCAATGTGGGCCAGGGGACACCTGTaGACCTGCACAGGCCTGAGCTCCCACAAAGGCTGC | + |
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Preference number: 3 (lower is better) Translates to: LGGPAMWARGHL*TCTGLSSHKGC Trigger: GCAGCCTTTGTGGGAGCTCAGGCCTGTGCAGGTCCACAGGTGTCCCCTGGCCCACATTGCTGGACCTCCTAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| 3UTR GCA 72 bp | CTGTGGACCTGCACAGGCCTGAGCTCCCACAAAGGCTaGTTGACCCTCAGGGAGCCAGAGGCATTTCACAGG | + |
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Preference number: 3 (lower is better) Translates to: LWTCTGLSSHKG*LTLREPEAFHR Trigger: CCTGTGAAATGCCTCTGGCTCCCTGAGGGTCAAGCAGCCTTTGTGGGAGCTCAGGCCTGTGCAGGTCCACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| 3UTR-3UTR CAA 90 bp | TCAGGCTTCTGGACAAGAGAAGTCAGAGCCAGGAGCCATGCCTCGGCAGCTGACTCCCACAAAGGCTGCTaGACCCTCAGGGAGCCAGAG | + |
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Preference number: 3 (lower is better) Translates to: SGFWTREVRARSHASAADSHKGC*TLREPE Trigger: CTCTGGCTCCCTGAGGGTCAAGCAGCCTTTGTGGGA...GTCAGCTGCCGAGGCATGGCTCCTGGCTCTGACTTCTCTTGTCCAGAAGCCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| 3UTR TCA 72 bp | GAGCCAGAGGCATTTCACAGGAAGGGGGCTTCCCTGTaGGGACAAGAAGCAGCCACAGACCCATTGGGGCCA | + |
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Preference number: 3 (lower is better) Translates to: EPEAFHRKGASL*GQEAATDPLGP Trigger: TGGCCCCAATGGGTCTGTGGCTGCTTCTTGTCCTCACAGGGAAGCCCCCTTCCTGTGAAATGCCTCTGGCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| 3UTR CCA 72 bp | GACTCCAGGCAAGCCTGGGGCTGTGCTGAGGGCCTATaGAGAGAGAGCTCCTATCTTAGGAGGTCCAGCAAT | + |
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Preference number: 3 (lower is better) Translates to: DSRQAWGCAEGL*RESSYLRRSSN Trigger: ATTGCTGGACCTCCTAAGATAGGAGCTCTCTCTCCATAGGCCCTCAGCACAGCCCCAGGCTTGCCTGGAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| 3UTR TCA 72 bp | CACAGACCCATTGGGGCCAGGTCTAGCTCAGGTACCTaGGCAAATGTTCCTTTAGAGTCCACCAGGGCCTCC | + |
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Preference number: 3 (lower is better) Translates to: HRPIGARSSSGT*ANVPLESTRAS Trigger: GGAGGCCCTGGTGGACTCTAAAGGAACATTTGCTCAGGTACCTGAGCTAGACCTGGCCCCAATGGGTCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| 3UTR TCA 72 bp | CATCCGGCCAGTTTCTGGCCAGGGAGTCAGTATTGGTaGGGTGCCAAAGGTGAGACTTGGCTTGGACTATGC | + |
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Preference number: 3 (lower is better) Translates to: HPASFWPGSQYW*GAKGETWLGLC Trigger: GCATAGTCCAAGCCAAGTCTCACCTTTGGCACCTCACCAATACTGACTCCCTGGCCAGAAACTGGCCGGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| 3UTR CCA 72 bp | CGGATGACCTCCAGTCAGGGAAGTTCTGGCTATTCCTaGACCTCTTTCTGGGAATTTCTGGGAGTCCCTCTC | + |
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Preference number: 3 (lower is better) Translates to: RMTSSQGSSGYS*TSFWEFLGVPL Trigger: GAGAGGGACTCCCAGAAATTCCCAGAAAGAGGTCCAGGAATAGCCAGAACTTCCCTGACTGGAGGTCATCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| 3UTR TCA 72 bp | CTGGCCAGGGAGTCAGTATTGGTGAGGTGCCAAAGGTaGGACTTGGCTTGGACTATGCTCAAGGATCACTGT | + |
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Preference number: 3 (lower is better) Translates to: LARESVLVRCQR*DLAWTMLKDHC Trigger: ACAGTGATCCTTGAGCATAGTCCAAGCCAAGTCTCACCTTTGGCACCTCACCAATACTGACTCCCTGGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| 3UTR CCA 72 bp | TCCAGGTTCTCGGATGACCTCCAGTCAGGGAAGTTCTaGCTATTCCTGGACCTCTTTCTGGGAATTTCTGGG | + |
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Preference number: 3 (lower is better) Translates to: SRFSDDLQSGKF*LFLDLFLGISG Trigger: CCCAGAAATTCCCAGAAAGAGGTCCAGGAATAGCCAGAACTTCCCTGACTGGAGGTCATCCGAGAACCTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| 3UTR CCA 72 bp | GTTCTGGCTATTCCTGGACCTCTTTCTGGGAATTTCTaGGAGTCCCTCTCTGGATCTCTGTACCTCACCACA | + |
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Preference number: 3 (lower is better) Translates to: VLAIPGPLSGNF*ESLSGSLYLTT Trigger: TGTGGTGAGGTACAGAGATCCAGAGAGGGACTCCCAGAAATTCCCAGAAAGAGGTCCAGGAATAGCCAGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| 3UTR CCA 72 bp | AGTCAGGGAAGTTCTGGCTATTCCTGGACCTCTTTCTaGGAATTTCTGGGAGTCCCTCTCTGGATCTCTGTA | + |
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Preference number: 3 (lower is better) Translates to: SQGSSGYSWTSF*EFLGVPLWISV Trigger: TACAGAGATCCAGAGAGGGACTCCCAGAAATTCCCAGAAAGAGGTCCAGGAATAGCCAGAACTTCCCTGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| CDS-3UTR CCA 90 bp | CTGACTCCAGGCAAGCCTGGGGCTGTGCTGAGGGCCTATGGAGAGAGAGCTCCTAGCCCTCGTGGCCTGTaGGCTTCACTCCCAGCACCT | + |
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Preference number: 4 (lower is better) Translates to: LTPGKPGAVLRAYGERAPSPRGL*ASLPAP Trigger: AGGTGCTGGGAGTGAAGCCCACAGGCCACGAGGGCT...AGGAGCTCTCTCTCCATAGGCCCTCAGCACAGCCCCAGGCTTGCCTGGAGTCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| CDS-3UTR GCA 90 bp | CAGAGCGGCCAGTCAGGCTTCTGGACAAGAGAAGTCAGAGCCAGGAGCCATGCCTGGGTTCGCTCCTCTTaGTTGGAGGCCGTGCCGAGC | + |
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Preference number: 4 (lower is better) Translates to: QSGQSGFWTREVRARSHAWVRSS*LEAVPS Trigger: GCTCGGCACGGCCTCCAAGCAAGAGGAGCGAACCCA...GGCATGGCTCCTGGCTCTGACTTCTCTTGTCCAGAAGCCTGACTGGCCGCTCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| CDS-3UTR TCA 90 bp | TCCTGCAGGGGACCAAAGACAATGCCATGTATCCCCCGAGGACAAACGCACTGGTCGTGGCCCCAGGTCTaGCGAATGACCTCTCGGCGG | + |
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Preference number: 4 (lower is better) Translates to: SCRGPKTMPCIPRGQTHWSWPQV*RMTSRR Trigger: CCGCCGAGAGGTCATTCGTCAGACCTGGGGCCACGA...CCAGTGCGTTTGTCCTCGGGGGATACATGGCATTGTCTTTGGTCCCCTGCAGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| CDS-3UTR GCA 90 bp | ACCAGGGCCTCCTACCAGGCTAGAGAGGTCAGGCTAGAGGCCCAAGATAGGAGAGAAGAGAGTCCGCACTaGACCCCTGCCCAAACCCGC | + |
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Preference number: 4 (lower is better) Translates to: TRASYQAREVRLEAQDRREESPH*TPAQTR Trigger: GCGGGTTTGGGCAGGGGTGCAGTGCGGACTCTCTTC...TCTCCTATCTTGGGCCTCTAGCCTGACCTCTCTAGCCTGGTAGGAGGCCCTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| CDS-3UTR CCA 90 bp | AGTCAGGCTTCTGGACAAGAGAAGTCAGAGCCAGGAGCCATGCCTCGGCAGCTGTTCGCTCCTCTTGCTTaGAGGCCGTGCCGAGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: SQASGQEKSEPGAMPRQLFAPLA*RPCRAG Trigger: TCCTGCTCGGCACGGCCTCCAAGCAAGAGGAGCGAA...CAGCTGCCGAGGCATGGCTCCTGGCTCTGACTTCTCTTGTCCAGAAGCCTGACT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| 3UTR CAA 72 bp | TGGACCTGCACAGGCCTGAGCTCCCACAAAGGCTGCTaGACCCTCAGGGAGCCAGAGGCATTTCACAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: WTCTGLSSHKGC*TLREPEAFHRK Trigger: CTTCCTGTGAAATGCCTCTGGCTCCCTGAGGGTCAAGCAGCCTTTGTGGGAGCTCAGGCCTGTGCAGGTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| CDS-3UTR CCA 90 bp | CCTTCACCTCCTGCAGGGGACCAAAGACAATGCCATGTATCCCCCGAGGACAAACCAGATTTCCAGTTTTaGCTGGCCCCGGCGTGGGCG | + |
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Preference number: 4 (lower is better) Translates to: PSPPAGDQRQCHVSPEDKPDFQF*LAPAWA Trigger: CGCCCACGCCGGGGCCAGCCAAAACTGGAAATCTGG...TTTGTCCTCGGGGGATACATGGCATTGTCTTTGGTCCCCTGCAGGAGGTGAAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| CDS-3UTR CCA 90 bp | CTTCACCTCCTGCAGGGGACCAAAGACAATGCCATGTATCCCCCGAGGACAAACGCACCAGATCCCACATaGCCAGCAGCTCGGCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: LHLLQGTKDNAMYPPRTNAPDPT*PAARQG Trigger: TCCCTGCCGAGCTGCTGGCCATGTGGGATCTGGTGC...GTTTGTCCTCGGGGGATACATGGCATTGTCTTTGGTCCCCTGCAGGAGGTGAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| CDS-3UTR GCA 90 bp | CTTCACCTCCTGCAGGGGACCAAAGACAATGCCATGTATCCCCCGAGGACAAACCTTGCTTGGAGGCCGTaGCGAGCAGGAAGAGAGTCC | + |
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Preference number: 4 (lower is better) Translates to: LHLLQGTKDNAMYPPRTNLAWRP*RAGRES Trigger: GGACTCTCTTCCTGCTCGGCACGGCCTCCAAGCAAG...GTTTGTCCTCGGGGGATACATGGCATTGTCTTTGGTCCCCTGCAGGAGGTGAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| CDS-3UTR GCA 90 bp | TCCTGCAGGGGACCAAAGACAATGCCATGTATCCCCCGAGGACAAACGCACTGGCAGGCATGGTGGAGTTaGCGAGCTAAGCTGCCAGAC | + |
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Preference number: 4 (lower is better) Translates to: SCRGPKTMPCIPRGQTHWQAWWS*RAKLPD Trigger: GTCTGGCAGCTTAGCTCGGCAACTCCACCATGCCTG...CCAGTGCGTTTGTCCTCGGGGGATACATGGCATTGTCTTTGGTCCCCTGCAGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| CDS-3UTR TCA 90 bp | CTTCACCTCCTGCAGGGGACCAAAGACAATGCCATGTATCCCCCGAGGACAAACAGATGCCAAAGGTCTTaGAGCCCTCGTGGCCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: LHLLQGTKDNAMYPPRTNRCQRS*SPRGLW Trigger: CCACAGGCCACGAGGGCTTCAAGACCTTTGGCATCT...GTTTGTCCTCGGGGGATACATGGCATTGTCTTTGGTCCCCTGCAGGAGGTGAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| CDS-3UTR CCA 90 bp | TTCTGGACAAGAGAAGTCAGAGCCAGGAGCCATGCCTCGGCAGCTGACTCCAGGGGTGGTTCAGCAACATaGGGAAATACCGGCAATGCC | + |
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Preference number: 4 (lower is better) Translates to: FWTREVRARSHASAADSRGGSAT*GNTGNA Trigger: GGCATTGCCGGTATTTCCCCATGTTGCTGAACCACC...CCTGGAGTCAGCTGCCGAGGCATGGCTCCTGGCTCTGACTTCTCTTGTCCAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| CDS-3UTR TCA 90 bp | GGGCACAGAGGGCCCAAACCCTTCACCTCCTGCAGGGGACCAAAGACAATGCCAAGAAGCTGTTGGGGTTaGCCAGATTTCCAGTTTTGG | + |
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Preference number: 4 (lower is better) Translates to: GHRGPKPFTSCRGPKTMPRSCWG*PDFQFW Trigger: CCAAAACTGGAAATCTGGTCAACCCCAACAGCTTCT...TGGCATTGTCTTTGGTCCCCTGCAGGAGGTGAAGGGTTTGGGCCCTCTGTGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| CDS-3UTR TCA 90 bp | AATTTCTGGGAGTCCCTCTCTGGATCTCTGTACCTCACCACACCTAGGGGCACACTAAGCTGCCAGACATaGGGAAACCCCCTCCACCAG | + |
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Preference number: 4 (lower is better) Translates to: NFWESLSGSLYLTTPRGTLSCQT*GNPLHQ Trigger: CTGGTGGAGGGGGTTTCCTCATGTCTGGCAGCTTAG...TGTGCCCCTAGGTGTGGTGAGGTACAGAGATCCAGAGAGGGACTCCCAGAAATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| CDS-3UTR GCA 90 bp | CTTCACCTCCTGCAGGGGACCAAAGACAATGCCATGTATCCCCCGAGGACAAACACCTCTCGGCGGTCATaGTGTGTGATGACCGACTTG | + |
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Preference number: 4 (lower is better) Translates to: LHLLQGTKDNAMYPPRTNTSRRS*CVMTDL Trigger: CAAGTCGGTCATCACACAGCATGACCGCCGAGAGGT...GTTTGTCCTCGGGGGATACATGGCATTGTCTTTGGTCCCCTGCAGGAGGTGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| CDS-3UTR CCA 90 bp | ACCAGGGCCTCCTACCAGGCTAGAGAGGTCAGGCTAGAGGCCCAAGATAGGAGAGCACACTTCTCTGGGTaGTTCAGCAACATGGGGAAA | + |
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Preference number: 4 (lower is better) Translates to: TRASYQAREVRLEAQDRRAHFSG*FSNMGK Trigger: TTTCCCCATGTTGCTGAACCACCCAGAGAAGTGTGC...TCTCCTATCTTGGGCCTCTAGCCTGACCTCTCTAGCCTGGTAGGAGGCCCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| CDS-3UTR CCA 90 bp | TCCTGCAGGGGACCAAAGACAATGCCATGTATCCCCCGAGGACAAACGCACTGGAGCCACTTGAGGAAGTaGATCTCCTTGAGGGTCAGG | + |
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Preference number: 4 (lower is better) Translates to: SCRGPKTMPCIPRGQTHWSHLRK*ISLRVR Trigger: CCTGACCCTCAAGGAGATCCACTTCCTCAAGTGGCT...CCAGTGCGTTTGTCCTCGGGGGATACATGGCATTGTCTTTGGTCCCCTGCAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| CDS-3UTR TCA 90 bp | AATTTCTGGGAGTCCCTCTCTGGATCTCTGTACCTCACCACACCTAGGGGCACACTCTGGAACCAGGGCTaGTGGGTCAGGTTGATGTTG | + |
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Preference number: 4 (lower is better) Translates to: NFWESLSGSLYLTTPRGTLWNQG*WVRLML Trigger: CAACATCAACCTGACCCATCAGCCCTGGTTCCAGAG...TGTGCCCCTAGGTGTGGTGAGGTACAGAGATCCAGAGAGGGACTCCCAGAAATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| CDS-3UTR CCA 90 bp | CTTCACCTCCTGCAGGGGACCAAAGACAATGCCATGTATCCCCCGAGGACAAACAAACTGTCGGAAGTGTaGCTCCAGACTCTGGAACCA | + |
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Preference number: 4 (lower is better) Translates to: LHLLQGTKDNAMYPPRTNKLSEV*LQTLEP Trigger: TGGTTCCAGAGTCTGGAGCCACACTTCCGACAGTTT...GTTTGTCCTCGGGGGATACATGGCATTGTCTTTGGTCCCCTGCAGGAGGTGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| CDS-3UTR CCA 90 bp | CCTTCACCTCCTGCAGGGGACCAAAGACAATGCCATGTATCCCCCGAGGACAAAAAACGAAGGGGACGTTaGGACAGTAAATGTCGAGCC | + |
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Preference number: 4 (lower is better) Translates to: PSPPAGDQRQCHVSPEDKKRRGR*DSKCRA Trigger: GGCTCGACATTTACTGTCCCAACGTCCCCTTCGTTT...TTTGTCCTCGGGGGATACATGGCATTGTCTTTGGTCCCCTGCAGGAGGTGAAGG 53% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| CDS-3UTR CCA 90 bp | AGAGGGCCCAAACCCTTCACCTCCTGCAGGGGACCAAAGACAATGCCATGTATCACAAATAGGTTTTCCTaGGGCTGCCGGTCAGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: RGPKPFTSCRGPKTMPCITNRFS*GCRSDR Trigger: TCTGTCTGACCGGCAGCCCCAGGAAAACCTATTTGT...GATACATGGCATTGTCTTTGGTCCCCTGCAGGAGGTGAAGGGTTTGGGCCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| 3UTR CAA 72 bp | GTCAGTATTGGTGAGGTGCCAAAGGTGAGACTTGGCTaGGACTATGCTCAAGGATCACTGTGCCTTGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VSIGEVPKVRLG*DYAQGSLCLVG Trigger: CCCCACAAGGCACAGTGATCCTTGAGCATAGTCCAAGCCAAGTCTCACCTTTGGCACCTCACCAATACTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| CDS-3UTR TCA 90 bp | CTCTTTCTGGGAATTTCTGGGAGTCCCTCTCTGGATCTCTGTACCTCACCACACCATCATCATCACCTTTaGAAACGAAGGGGACGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LFLGISGSPSLDLCTSPHHHHHL*KRRGRW Trigger: CCAACGTCCCCTTCGTTTTCAAAGGTGATGATGATG...GTGTGGTGAGGTACAGAGATCCAGAGAGGGACTCCCAGAAATTCCCAGAAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| CDS-3UTR GCA 90 bp | AATTTCACAGTAATAGAAGAATGTCTACATCTAGGGCCCATCCGGCCAGTTTCTAGGTTTTCCTGGGGCTaGCGGTCAGACAGAAACTCG | + |
|
Preference number: 4 (lower is better) Translates to: NFTVIEECLHLGPIRPVSRFSWG*RSDRNS Trigger: CGAGTTTCTGTCTGACCGGCAGCCCCAGGAAAACCT...AGAAACTGGCCGGATGGGCCCTAGATGTAGACATTCTTCTATTACTGTGAAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| CDS-3UTR CCA 90 bp | AATTTCACAGTAATAGAAGAATGTCTACATCTAGGGCCCATCCGGCCAGTTTCTGCCAGCACACTTCTCTaGGTGGTTCAGCAACATGGG | + |
|
Preference number: 4 (lower is better) Translates to: NFTVIEECLHLGPIRPVSASTLL*VVQQHG Trigger: CCCATGTTGCTGAACCACCCAGAGAAGTGTGCTGGC...AGAAACTGGCCGGATGGGCCCTAGATGTAGACATTCTTCTATTACTGTGAAATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| CDS GCA 90 bp | GCTTGGAGGCCGTGCCGAGCAGGAAGAGAGTCCGCACTGCACCCCTaGCCAAACCCGCTGACTCCCATTCGTGGCCCCAGGTCTGACGAA | + |
|
Preference number: 5 (lower is better) Translates to: AWRPCRAGRESALHP*PNPLTPIRGPRSDE Trigger: TTCGTCAGACCTGGGGCCACGAATGGGAGTCAGCGGGTTTGGGCAGGGGTGCAGTGCGGACTCTCTTCCTGCTCGGCACGGCCTCCAAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113306.4 ENSMUST00000188695.2 |
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| CDS CCA 90 bp | CCTCGTAGGCCAGCAGCTGCTGATAGTGGGTTCGCTCCTCTTGCTTaGAGGCCGTGCCGAGCAGGAAGAGAGTCCGCACTGCACCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PRRPAAADSGFAPLA*RPCRAGRESALHPC Trigger: GCAGGGGTGCAGTGCGGACTCTCTTCCTGCTCGGCACGGCCTCCAAGCAAGAGGAGCGAACCCACTATCAGCAGCTGCTGGCCTACGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113306.4 ENSMUST00000188695.2 |
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| CDS CCA 90 bp | CGGCTGCTTCGGACCCGAGAGATGCCAAAGGTCTTGAAGCCCTCGTaGCCTGTGGGCTTCACTCCCAGCACCTCCAAGCACATGCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RLLRTREMPKVLKPS*PVGFTPSTSKHMPR Trigger: CCTGGGCATGTGCTTGGAGGTGCTGGGAGTGAAGCCCACAGGCCACGAGGGCTTCAAGACCTTTGGCATCTCTCGGGTCCGAAGCAGCCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| CDS-3UTR CAA 90 bp | CAGAGCGGCCAGTCAGGCTTCTGGACAAGAGAAGTCAGAGCCAGGAGCCATGCCGTTCGCTCCTCTTGCTaGGAGGCCGTGCCGAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: QSGQSGFWTREVRARSHAVRSSC*EAVPSR Trigger: CCTGCTCGGCACGGCCTCCAAGCAAGAGGAGCGAAC...GGCATGGCTCCTGGCTCTGACTTCTCTTGTCCAGAAGCCTGACTGGCCGCTCTG 63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| CDS TCA 90 bp | GCACCCCTGCCCAAACCCGCTGACTCCCATTCGTGGCCCCAGGTCTaGCGAATGACCTCTCGGCGGTCATGCTGTGTGATGACCGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: APLPKPADSHSWPQV*RMTSRRSCCVMTDL Trigger: CAAGTCGGTCATCACACAGCATGACCGCCGAGAGGTCATTCGTCAGACCTGGGGCCACGAATGGGAGTCAGCGGGTTTGGGCAGGGGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113306.4 ENSMUST00000188695.2 |
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| CDS TCA 90 bp | CCTTGTTCATCCGGCTGCTTCGGACCCGAGAGATGCCAAAGGTCTTaGAGCCCTCGTGGCCTGTGGGCTTCACTCCCAGCACCTCCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: PCSSGCFGPERCQRS*SPRGLWASLPAPPS Trigger: GCTTGGAGGTGCTGGGAGTGAAGCCCACAGGCCACGAGGGCTTCAAGACCTTTGGCATCTCTCGGGTCCGAAGCAGCCGGATGAACAAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| CDS TCA 90 bp | GTGTGTCACAGGCATGGTGGAGTTGCCGAGCTAAGCTGCCAGACATaGGGAAACCCCCTCCACCAGCATAGGGCGGGTAGGTGGCCTTAC | + |
|
Preference number: 5 (lower is better) Translates to: VCHRHGGVAELSCQT*GNPLHQHRAGRWPY Trigger: GTAAGGCCACCTACCCGCCCTATGCTGGTGGAGGGGGTTTCCTCATGTCTGGCAGCTTAGCTCGGCAACTCCACCATGCCTGTGACACAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| CDS-3UTR CAA 90 bp | CTCCTGCAGGGGACCAAAGACAATGCCATGTATCCCCCGAGGACAAACGCACTGACCAGATTTCCAGTTTaGGCTGGCCCCGGCGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LLQGTKDNAMYPPRTNALTRFPV*AGPGVG Trigger: GCCCACGCCGGGGCCAGCCAAAACTGGAAATCTGGT...CAGTGCGTTTGTCCTCGGGGGATACATGGCATTGTCTTTGGTCCCCTGCAGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| CDS-3UTR CAA 90 bp | CCTTCACCTCCTGCAGGGGACCAAAGACAATGCCATGTATCCCCCGAGGACAAAGTGGGTTCGCTCCTCTaGCTTGGAGGCCGTGCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: PSPPAGDQRQCHVSPEDKVGSLL*LGGRAE Trigger: CTCGGCACGGCCTCCAAGCAAGAGGAGCGAACCCAC...TTTGTCCTCGGGGGATACATGGCATTGTCTTTGGTCCCCTGCAGGAGGTGAAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| CDS CCA 90 bp | ACATGGCCAGCAGCTCGGCAGGGAGCAACTTGTGTACCACAAGCATaGCCCGGTAGAAGCACGGTTCCTTGTTCATCCGGCTGCTTCGGA | + |
|
Preference number: 5 (lower is better) Translates to: TWPAARQGATCVPQA*PGRSTVPCSSGCFG Trigger: TCCGAAGCAGCCGGATGAACAAGGAACCGTGCTTCTACCGGGCCATGCTTGTGGTACACAAGTTGCTCCCTGCCGAGCTGCTGGCCATGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| CDS-3UTR CAA 90 bp | AGAGGGCCCAAACCCTTCACCTCCTGCAGGGGACCAAAGACAATGCCATGTATCGAGATGCCAAAGGTCTaGAAGCCCTCGTGGCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RGPKPFTSCRGPKTMPCIEMPKV*KPSWPV Trigger: CACAGGCCACGAGGGCTTCAAGACCTTTGGCATCTC...GATACATGGCATTGTCTTTGGTCCCCTGCAGGAGGTGAAGGGTTTGGGCCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| CDS-3UTR CAA 90 bp | CTGACTCCAGGCAAGCCTGGGGCTGTGCTGAGGGCCTATGGAGAGAGAGCTCCTACATCATCATCACCTTaGAAAACGAAGGGGACGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LTPGKPGAVLRAYGERAPTSSSP*KTKGTL Trigger: CAACGTCCCCTTCGTTTTCAAAGGTGATGATGATGT...AGGAGCTCTCTCTCCATAGGCCCTCAGCACAGCCCCAGGCTTGCCTGGAGTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| CDS GCA 90 bp | TCATCAATAGGGAAGAGTTCCAGTGTGTCACAGGCATGGTGGAGTTaGCGAGCTAAGCTGCCAGACATGAGGAAACCCCCTCCACCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SSIGKSSSVSQAWWS*RAKLPDMRKPPPPA Trigger: TGCTGGTGGAGGGGGTTTCCTCATGTCTGGCAGCTTAGCTCGGCAACTCCACCATGCCTGTGACACACTGGAACTCTTCCCTATTGATGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| CDS CCA 90 bp | AGGTTGATGTTGATAGAGCAGTTAGTGGTGATCACATCCCAGACCTaGGGTCCCCGAGGAACTGTGGGAGTGGGAGCCGCTACATCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: RLMLIEQLVVITSQT*GPRGTVGVGAATSF Trigger: AAAGGATGTAGCGGCTCCCACTCCCACAGTTCCTCGGGGACCCCAGGTCTGGGATGTGATCACCACTAACTGCTCTATCAACATCAACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| CDS CCA 90 bp | CGACTTGACAACCACCAGCATATAGACATCGCCAGCACACTTCTCTaGGTGGTTCAGCAACATGGGGAAATACCGGCAATGCCGATAGGC | + |
|
Preference number: 5 (lower is better) Translates to: RLDNHQHIDIASTLL*VVQQHGEIPAMPIG Trigger: GCCTATCGGCATTGCCGGTATTTCCCCATGTTGCTGAACCACCCAGAGAAGTGTGCTGGCGATGTCTATATGCTGGTGGTTGTCAAGTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| CDS CCA 90 bp | ATGGGCCGAGCATGTTTCAGAACATCACCTACAAATAGGTTTTCCTaGGGCTGCCGGTCAGACAGAAACTCGAGCAGGTTGGTGGGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: MGRACFRTSPTNRFS*GCRSDRNSSRLVGL Trigger: CAACCCCACCAACCTGCTCGAGTTTCTGTCTGACCGGCAGCCCCAGGAAAACCTATTTGTAGGTGATGTTCTGAAACATGCTCGGCCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113306.4 ENSMUST00000188695.2 |
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| CDS-3UTR CAA 90 bp | CTTCACCTCCTGCAGGGGACCAAAGACAATGCCATGTATCCCCCGAGGACAAACAGAAACTCGAGCAGGTaGGTGGGGTTGACAAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: LHLLQGTKDNAMYPPRTNRNSSR*VGLTKT Trigger: TGTCTTTGTCAACCCCACCAACCTGCTCGAGTTTCT...GTTTGTCCTCGGGGGATACATGGCATTGTCTTTGGTCCCCTGCAGGAGGTGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| CDS CCA 90 bp | AAGACATCATCAATAGGGAAGAGTTCCAGTGTGTCACAGGCATGGTaGAGTTGCCGAGCTAAGCTGCCAGACATGAGGAAACCCCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: KTSSIGKSSSVSQAW*SCRAKLPDMRKPPP Trigger: TGGAGGGGGTTTCCTCATGTCTGGCAGCTTAGCTCGGCAACTCCACCATGCCTGTGACACACTGGAACTCTTCCCTATTGATGATGTCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| CDS-3UTR CAA 90 bp | AATTTCTGGGAGTCCCTCTCTGGATCTCTGTACCTCACCACACCTAGGGGCACAGAGCCGCTACATCCTTaGAACTCTTCCAGAAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: NFWESLSGSLYLTTPRGTEPLHP*NSSRSC Trigger: ACAGCTTCTGGAAGAGTTCAAAGGATGTAGCGGCTC...TGTGCCCCTAGGTGTGGTGAGGTACAGAGATCCAGAGAGGGACTCCCAGAAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| CDS-3UTR CAA 90 bp | CCTTCACCTCCTGCAGGGGACCAAAGACAATGCCATGTATCCCCCGAGGACAAATGGGTCAGGTTGATGTaGATAGAGCAGTTAGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: PSPPAGDQRQCHVSPEDKWVRLM*IEQLVV Trigger: CACCACTAACTGCTCTATCAACATCAACCTGACCCA...TTTGTCCTCGGGGGATACATGGCATTGTCTTTGGTCCCCTGCAGGAGGTGAAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| CDS CCA 90 bp | GCATATAGACATCGCCAGCACACTTCTCTGGGTGGTTCAGCAACATaGGGAAATACCGGCAATGCCGATAGGCTAGAAACTGTCGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: AYRHRQHTSLGGSAT*GNTGNADRLETVGS Trigger: ACTTCCGACAGTTTCTAGCCTATCGGCATTGCCGGTATTTCCCCATGTTGCTGAACCACCCAGAGAAGTGTGCTGGCGATGTCTATATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| CDS-3UTR CAA 90 bp | TCCTGCAGGGGACCAAAGACAATGCCATGTATCCCCCGAGGACAAACGCACTGGTATTTGTTATCTTTTTaGCGGATGGGCCGAGCATGT | + |
|
Preference number: 5 (lower is better) Translates to: SCRGPKTMPCIPRGQTHWYLLSF*RMGRAC Trigger: ACATGCTCGGCCCATCCGCAAAAAAGATAACAAATA...CCAGTGCGTTTGTCCTCGGGGGATACATGGCATTGTCTTTGGTCCCCTGCAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| CDS-3UTR CAA 90 bp | AATTTCACAGTAATAGAAGAATGTCTACATCTAGGGCCCATCCGGCCAGTTTCTCTCTTCCAGAAGCTGTaGGGGTTGACCAGATTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: NFTVIEECLHLGPIRPVSLFQKL*GLTRFP Trigger: TGGAAATCTGGTCAACCCCAACAGCTTCTGGAAGAG...AGAAACTGGCCGGATGGGCCCTAGATGTAGACATTCTTCTATTACTGTGAAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| CDS GCA 72 bp | CCGTGCCGAGCAGGAAGAGAGTCCGCACTGCACCCCTaGCCAAACCCGCTGACTCCCATTCGTGGCCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PCRAGRESALHP*PNPLTPIRGPR Trigger: CCTGGGGCCACGAATGGGAGTCAGCGGGTTTGGGCAGGGGTGCAGTGCGGACTCTCTTCCTGCTCGGCACGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113306.4 ENSMUST00000188695.2 |
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| CDS GCA 72 bp | GCTGATAGTGGGTTCGCTCCTCTTGCTTGGAGGCCGTaGCGAGCAGGAAGAGAGTCCGCACTGCACCCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: ADSGFAPLAWRP*RAGRESALHPC Trigger: GCAGGGGTGCAGTGCGGACTCTCTTCCTGCTCGGCACGGCCTCCAAGCAAGAGGAGCGAACCCACTATCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113306.4 ENSMUST00000188695.2 |
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| CDS CAA 90 bp | ACGGTCCTCGTAGGCCAGCAGCTGCTGATAGTGGGTTCGCTCCTCTaGCTTGGAGGCCGTGCCGAGCAGGAAGAGAGTCCGCACTGCACC | + |
|
Preference number: 6 (lower is better) Translates to: TVLVGQQLLIVGSLL*LGGRAEQEESPHCT Trigger: GGTGCAGTGCGGACTCTCTTCCTGCTCGGCACGGCCTCCAAGCAAGAGGAGCGAACCCACTATCAGCAGCTGCTGGCCTACGAGGACCGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113306.4 ENSMUST00000188695.2 |
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| CDS TCA 72 bp | TCCGGCTGCTTCGGACCCGAGAGATGCCAAAGGTCTTaGAGCCCTCGTGGCCTGTGGGCTTCACTCCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SGCFGPERCQRS*SPRGLWASLPA Trigger: TGCTGGGAGTGAAGCCCACAGGCCACGAGGGCTTCAAGACCTTTGGCATCTCTCGGGTCCGAAGCAGCCGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| CDS CCA 72 bp | CCAGCAGCTGCTGATAGTGGGTTCGCTCCTCTTGCTTaGAGGCCGTGCCGAGCAGGAAGAGAGTCCGCACTG | + |
|
Preference number: 6 (lower is better) Translates to: PAAADSGFAPLA*RPCRAGRESAL Trigger: CAGTGCGGACTCTCTTCCTGCTCGGCACGGCCTCCAAGCAAGAGGAGCGAACCCACTATCAGCAGCTGCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113306.4 ENSMUST00000188695.2 |
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| CDS CCA 72 bp | CGGACCCGAGAGATGCCAAAGGTCTTGAAGCCCTCGTaGCCTGTGGGCTTCACTCCCAGCACCTCCAAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: RTREMPKVLKPS*PVGFTPSTSKH Trigger: GTGCTTGGAGGTGCTGGGAGTGAAGCCCACAGGCCACGAGGGCTTCAAGACCTTTGGCATCTCTCGGGTCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| CDS CAA 72 bp | GTAGGCCAGCAGCTGCTGATAGTGGGTTCGCTCCTCTaGCTTGGAGGCCGTGCCGAGCAGGAAGAGAGTCCG | + |
|
Preference number: 6 (lower is better) Translates to: VGQQLLIVGSLL*LGGRAEQEESP Trigger: CGGACTCTCTTCCTGCTCGGCACGGCCTCCAAGCAAGAGGAGCGAACCCACTATCAGCAGCTGCTGGCCTAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113306.4 ENSMUST00000188695.2 |
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| CDS CAA 72 bp | ATCCGGCTGCTTCGGACCCGAGAGATGCCAAAGGTCTaGAAGCCCTCGTGGCCTGTGGGCTTCACTCCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: IRLLRTREMPKV*KPSWPVGFTPS Trigger: GCTGGGAGTGAAGCCCACAGGCCACGAGGGCTTCAAGACCTTTGGCATCTCTCGGGTCCGAAGCAGCCGGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| CDS TCA 72 bp | CCCAAACCCGCTGACTCCCATTCGTGGCCCCAGGTCTaGCGAATGACCTCTCGGCGGTCATGCTGTGTGATG | + |
|
Preference number: 6 (lower is better) Translates to: PKPADSHSWPQV*RMTSRRSCCVM Trigger: CATCACACAGCATGACCGCCGAGAGGTCATTCGTCAGACCTGGGGCCACGAATGGGAGTCAGCGGGTTTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113306.4 ENSMUST00000188695.2 |
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| CDS CAA 90 bp | TCCTTGTTCATCCGGCTGCTTCGGACCCGAGAGATGCCAAAGGTCTaGAAGCCCTCGTGGCCTGTGGGCTTCACTCCCAGCACCTCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: SLFIRLLRTREMPKV*KPSWPVGFTPSTSK Trigger: CTTGGAGGTGCTGGGAGTGAAGCCCACAGGCCACGAGGGCTTCAAGACCTTTGGCATCTCTCGGGTCCGAAGCAGCCGGATGAACAAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| CDS CCA 72 bp | GCAGCTCGGCAGGGAGCAACTTGTGTACCACAAGCATaGCCCGGTAGAAGCACGGTTCCTTGTTCATCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: AARQGATCVPQA*PGRSTVPCSSG Trigger: GCCGGATGAACAAGGAACCGTGCTTCTACCGGGCCATGCTTGTGGTACACAAGTTGCTCCCTGCCGAGCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| CDS CCA 72 bp | TTGATAGAGCAGTTAGTGGTGATCACATCCCAGACCTaGGGTCCCCGAGGAACTGTGGGAGTGGGAGCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: LIEQLVVITSQT*GPRGTVGVGAA Trigger: AGCGGCTCCCACTCCCACAGTTCCTCGGGGACCCCAGGTCTGGGATGTGATCACCACTAACTGCTCTATCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| CDS GCA 72 bp | GGGAAGAGTTCCAGTGTGTCACAGGCATGGTGGAGTTaGCGAGCTAAGCTGCCAGACATGAGGAAACCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: GKSSSVSQAWWS*RAKLPDMRKPP Trigger: AGGGGGTTTCCTCATGTCTGGCAGCTTAGCTCGGCAACTCCACCATGCCTGTGACACACTGGAACTCTTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| CDS GCA 72 bp | AGCACCTGGAACTTGACAGAACAGGTAAGATTGCTATaGACCAGATCCCACATGGCCAGCAGCTCGGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: STWNLTEQVRLL*TRSHMASSSAG Trigger: CCCTGCCGAGCTGCTGGCCATGTGGGATCTGGTGCATAGCAATCTTACCTGTTCTGTCAAGTTCCAGGTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| CDS TCA 72 bp | CCGAGGAACTGTGGGAGTGGGAGCCGCTACATCCTTTaGACTCTTCCAGAAGCTGTTGGGGTTGACCAGATT | + |
|
Preference number: 6 (lower is better) Translates to: PRNCGSGSRYIL*TLPEAVGVDQI Trigger: AATCTGGTCAACCCCAACAGCTTCTGGAAGAGTTCAAAGGATGTAGCGGCTCCCACTCCCACAGTTCCTCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| CDS CAA 72 bp | GGAGCCGCTACATCCTTTGAACTCTTCCAGAAGCTGTaGGGGTTGACCAGATTTCCAGTTTTGGCTGGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: GAATSFELFQKL*GLTRFPVLAGP Trigger: GGGGCCAGCCAAAACTGGAAATCTGGTCAACCCCAACAGCTTCTGGAAGAGTTCAAAGGATGTAGCGGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
||
| CDS GCA 72 bp | TTCAGAACATCACCTACAAATAGGTTTTCCTGGGGCTaGCGGTCAGACAGAAACTCGAGCAGGTTGGTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: FRTSPTNRFSWG*RSDRNSSRLVG Trigger: CCCCACCAACCTGCTCGAGTTTCTGTCTGACCGGCAGCCCCAGGAAAACCTATTTGTAGGTGATGTTCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113306.4 ENSMUST00000188695.2 |
||
| CDS CCA 72 bp | CATCGCCAGCACACTTCTCTGGGTGGTTCAGCAACATaGGGAAATACCGGCAATGCCGATAGGCTAGAAACT | + |
|
Preference number: 6 (lower is better) Translates to: HRQHTSLGGSAT*GNTGNADRLET Trigger: AGTTTCTAGCCTATCGGCATTGCCGGTATTTCCCCATGTTGCTGAACCACCCAGAGAAGTGTGCTGGCGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
||
| CDS CCA 72 bp | TCATCAATAGGGAAGAGTTCCAGTGTGTCACAGGCATaGTGGAGTTGCCGAGCTAAGCTGCCAGACATGAGG | + |
|
Preference number: 6 (lower is better) Translates to: SSIGKSSSVSQA*WSCRAKLPDMR Trigger: CCTCATGTCTGGCAGCTTAGCTCGGCAACTCCACCATGCCTGTGACACACTGGAACTCTTCCCTATTGATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
||
| CDS CCA 72 bp | AACCACCAGCATATAGACATCGCCAGCACACTTCTCTaGGTGGTTCAGCAACATGGGGAAATACCGGCAATG | + |
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Preference number: 6 (lower is better) Translates to: NHQHIDIASTLL*VVQQHGEIPAM Trigger: CATTGCCGGTATTTCCCCATGTTGCTGAACCACCCAGAGAAGTGTGCTGGCGATGTCTATATGCTGGTGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| CDS CCA 72 bp | TCAATAGGGAAGAGTTCCAGTGTGTCACAGGCATGGTaGAGTTGCCGAGCTAAGCTGCCAGACATGAGGAAA | + |
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Preference number: 6 (lower is better) Translates to: SIGKSSSVSQAW*SCRAKLPDMRK Trigger: TTTCCTCATGTCTGGCAGCTTAGCTCGGCAACTCCACCATGCCTGTGACACACTGGAACTCTTCCCTATTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113306.4 |
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| CDS CCA 72 bp | GCATGTTTCAGAACATCACCTACAAATAGGTTTTCCTaGGGCTGCCGGTCAGACAGAAACTCGAGCAGGTTG | + |
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Preference number: 6 (lower is better) Translates to: ACFRTSPTNRFS*GCRSDRNSSRL Trigger: CAACCTGCTCGAGTTTCTGTCTGACCGGCAGCCCCAGGAAAACCTATTTGTAGGTGATGTTCTGAAACATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113306.4 ENSMUST00000188695.2 |
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