Pregenerated sensors for B3GNT5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022686Ensembl transcript IDs: ENSMUST00000079780.10, ENSMUST00000119468.2, ENSMUST00000121344.8, ENSMUST00000164397.8
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGTGTCCTACAAGACCTTATTGGAAGCGGCATTTGAGTATTGAGTaGCATGGTCTGGACTCCAAGCTGATGTTACAATTACAAGGAAAA | + |
|
Preference number: 1 (lower is better) Translates to: LCPTRPYWKRHLSIE*HGLDSKLMLQLQGK Trigger: TTTTCCTTGTAATTGTAACATCAGCTTGGAGTCCAGACCATGGCACTCAATACTCAAATGCCGCTTCCAATAAGGTCTTGTAGGACACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079780.10 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| 3UTR CCA 90 bp | TCAATCAAACAAACAAAGAACTGCTTCATAAAGTACCAGTGTCAATaGACCATCTTGTATACAAGAGAGAGATACCATTTTCCAGCCAGT | + |
|
Preference number: 1 (lower is better) Translates to: SIKQTKNCFIKYQCQ*TILYTRERYHFPAS Trigger: ACTGGCTGGAAAATGGTATCTCTCTCTTGTATACAAGATGGTCCATTGACACTGGTACTTTATGAAGCAGTTCTTTGTTTGTTTGATTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079780.10 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| 3UTR GCA 90 bp | AAGATGAACAAGGTTCAAGAGAGCTCAATCAAACAAACAAAGAACTaGTTCATAAAGTACCAGTGTCAATGGACCATCTTGTATACAAGA | + |
|
Preference number: 1 (lower is better) Translates to: KMNKVQESSIKQTKN*FIKYQCQWTILYTR Trigger: TCTTGTATACAAGATGGTCCATTGACACTGGTACTTTATGAAGCAGTTCTTTGTTTGTTTGATTGAGCTCTCTTGAACCTTGTTCATCTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079780.10 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| 3UTR TCA 90 bp | ACCCTAATAATAGTAGCTAAACTTTCCCTATTATATGCATCTGTCTaGGGGTTGTTAAGCATCCATCTTCATTTGCTGAAATCGTGTTTT | + |
|
Preference number: 1 (lower is better) Translates to: TLIIVAKLSLLYASV*GLLSIHLHLLKSCF Trigger: AAAACACGATTTCAGCAAATGAAGATGGATGCTTAACAACCCTCAGACAGATGCATATAATAGGGAAAGTTTAGCTACTATTATTAGGGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079780.10 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| 3UTR-3UTR GCA 90 bp | GAATACCCCTTAGTCCTTTCTGTGCTGGTGCACTGTTTGCATACCAGCCACATGTCCTTCTGCATCACCTaGCTCCCTCCACCTCTACCT | + |
|
Preference number: 2 (lower is better) Translates to: EYPLVLSVLVHCLHTSHMSFCIT*LPPPLP Trigger: AGGTAGAGGTGGAGGGAGGCAGGTGATGCAGAAGGA...CATGTGGCTGGTATGCAAACAGTGCACCAGCACAGAAAGGACTAAGGGGTATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079780.10 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| 3UTR-3UTR GCA 90 bp | CCTCATTGTAAGCTGCATCCAAACAACTACCTTAAACAGAGGCCAATATCTAGTTCCTTCTGCATCACCTaGCTCCCTCCACCTCTACCT | + |
|
Preference number: 2 (lower is better) Translates to: PHCKLHPNNYLKQRPISSSFCIT*LPPPLP Trigger: AGGTAGAGGTGGAGGGAGGCAGGTGATGCAGAAGGA...ACTAGATATTGGCCTCTGTTTAAGGTAGTTGTTTGGATGCAGCTTACAATGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079780.10 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| 3UTR-3UTR TCA 90 bp | GAATACCCCTTAGTCCTTTCTGTGCTGGTGCACTGTTTGCATACCAGCCACATGCCCAAACTATTATTTTaGTATCAAGGCTTCTCAGGT | + |
|
Preference number: 2 (lower is better) Translates to: EYPLVLSVLVHCLHTSHMPKLLF*YQGFSG Trigger: ACCTGAGAAGCCTTGATATCAAAATAATAGTTTGGG...CATGTGGCTGGTATGCAAACAGTGCACCAGCACAGAAAGGACTAAGGGGTATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079780.10 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| 3UTR-3UTR TCA 90 bp | CATGGCATTCTGGACAAACAGCATTTCCCACAGTCACAGCATAGCTCCTTAAGTGTCTGGACTCCAAGCTaGTGTTACAATTACAAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: HGILDKQHFPQSQHSSLSVWTPS*CYNYKE Trigger: TTCCTTGTAATTGTAACATCAGCTTGGAGTCCAGAC...ACTTAAGGAGCTATGCTGTGACTGTGGGAAATGCTGTTTGTCCAGAATGCCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164397.8 |
||
| 3UTR-3UTR GCA 90 bp | TGTTATTATACTCCTCATTGTAAGCTGCATCCAAACAACTACCTTAAACAGAGGTCCTTCTGCATCACCTaGCTCCCTCCACCTCTACCT | + |
|
Preference number: 2 (lower is better) Translates to: CYYTPHCKLHPNNYLKQRSFCIT*LPPPLP Trigger: AGGTAGAGGTGGAGGGAGGCAGGTGATGCAGAAGGA...CCTCTGTTTAAGGTAGTTGTTTGGATGCAGCTTACAATGAGGAGTATAATAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079780.10 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| 3UTR-3UTR TCA 90 bp | CCTCATTGTAAGCTGCATCCAAACAACTACCTTAAACAGAGGCCAATATCTAGTCCCAAACTATTATTTTaGTATCAAGGCTTCTCAGGT | + |
|
Preference number: 2 (lower is better) Translates to: PHCKLHPNNYLKQRPISSPKLLF*YQGFSG Trigger: ACCTGAGAAGCCTTGATATCAAAATAATAGTTTGGG...ACTAGATATTGGCCTCTGTTTAAGGTAGTTGTTTGGATGCAGCTTACAATGAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079780.10 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| 3UTR-3UTR TCA 90 bp | ACTACCTTAGAATGTTTAACACTAGTCTTGAAATTAGTAGGAAACTACCCGAGTGCTGAAATCGTGTTTTaGCCTGCATTACAGGTCCTT | + |
|
Preference number: 2 (lower is better) Translates to: TTLECLTLVLKLVGNYPSAEIVF*PALQVL Trigger: AAGGACCTGTAATGCAGGTCAAAACACGATTTCAGC...ACTCGGGTAGTTTCCTACTAATTTCAAGACTAGTGTTAAACATTCTAAGGTAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079780.10 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTCAGGTATCTTCCCCAAACTATTATTTTGATATCAAGGCTTCTCAGGTGTTCAGCTGCAGTTTAATTTaGAGTTACACTGACCAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: SQVSSPNYYFDIKASQVFSCSLI*SYTDQF Trigger: AAACTGGTCAGTGTAACTCCAAATTAAACTGCAGCT...GAACACCTGAGAAGCCTTGATATCAAAATAATAGTTTGGGGAAGATACCTGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| 3UTR-3UTR TCA 90 bp | TATCTTCCCCAAACTATTATTTTGATATCAAGGCTTCTCAGGTGTTCTCCATACTGCTTTCAATTCATTTaGCTTAGGGTAGAGAGAAAC | + |
|
Preference number: 2 (lower is better) Translates to: YLPQTIILISRLLRCSPYCFQFI*LRVERN Trigger: GTTTCTCTCTACCCTAAGTCAAATGAATTGAAAGCA...GTATGGAGAACACCTGAGAAGCCTTGATATCAAAATAATAGTTTGGGGAAGATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| 3UTR-3UTR TCA 90 bp | TTCTCAGGTGTTCTCCATACCTTAAATACATGTGTAGAACCAAATGAGAACTTGTGCTTTCAATTCATTTaGCTTAGGGTAGAGAGAAAC | + |
|
Preference number: 2 (lower is better) Translates to: FSGVLHTLNTCVEPNENLCFQFI*LRVERN Trigger: GTTTCTCTCTACCCTAAGTCAAATGAATTGAAAGCA...CAAGTTCTCATTTGGTTCTACACATGTATTTAAGGTATGGAGAACACCTGAGAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| 3UTR-3UTR TCA 90 bp | CCCCAAACTATTATTTTGATATCAAGGCTTCTCAGGTGTTCTCCATACCTTAAATGCTTTCAATTCATTTaGCTTAGGGTAGAGAGAAAC | + |
|
Preference number: 2 (lower is better) Translates to: PQTIILISRLLRCSPYLKCFQFI*LRVERN Trigger: GTTTCTCTCTACCCTAAGTCAAATGAATTGAAAGCA...TTTAAGGTATGGAGAACACCTGAGAAGCCTTGATATCAAAATAATAGTTTGGGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| 3UTR-3UTR TCA 90 bp | TATCTTCCCCAAACTATTATTTTGATATCAAGGCTTCTCAGGTGTTCTCCATACCTTTACCCTTGCTCATaGTCTAAGTCGTTTAGAATA | + |
|
Preference number: 2 (lower is better) Translates to: YLPQTIILISRLLRCSPYLYPCS*SKSFRI Trigger: TATTCTAAACGACTTAGATCATGAGCAAGGGTAAAG...GTATGGAGAACACCTGAGAAGCCTTGATATCAAAATAATAGTTTGGGGAAGATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| 3UTR-3UTR TCA 90 bp | CACCTCTACCTAGAACTCTTTAATAAGATAATTGGGATTGCTTGTTCTAAGAGGCTTTACCCTTGCTCATaGTCTAAGTCGTTTAGAATA | + |
|
Preference number: 2 (lower is better) Translates to: HLYLELFNKIIGIACSKRLYPCS*SKSFRI Trigger: TATTCTAAACGACTTAGATCATGAGCAAGGGTAAAG...CCTCTTAGAACAAGCAATCCCAATTATCTTATTAAAGAGTTCTAGGTAGAGGTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| 3UTR-3UTR CCA 90 bp | CCCCAAACTATTATTTTGATATCAAGGCTTCTCAGGTGTTCTCCATACCTTAAAAGCTGCAGTTTAATTTaGAGTTACACTGACCAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: PQTIILISRLLRCSPYLKSCSLI*SYTDQF Trigger: AAACTGGTCAGTGTAACTCCAAATTAAACTGCAGCT...TTTAAGGTATGGAGAACACCTGAGAAGCCTTGATATCAAAATAATAGTTTGGGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| 3UTR-3UTR CCA 90 bp | TATCTTCCCCAAACTATTATTTTGATATCAAGGCTTCTCAGGTGTTCTCCATACAGCTGCAGTTTAATTTaGAGTTACACTGACCAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: YLPQTIILISRLLRCSPYSCSLI*SYTDQF Trigger: AAACTGGTCAGTGTAACTCCAAATTAAACTGCAGCT...GTATGGAGAACACCTGAGAAGCCTTGATATCAAAATAATAGTTTGGGGAAGATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| 3UTR-3UTR CCA 90 bp | CACCTCTACCTAGAACTCTTTAATAAGATAATTGGGATTGCTTGTTCTAAGAGGAGCTGCAGTTTAATTTaGAGTTACACTGACCAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: HLYLELFNKIIGIACSKRSCSLI*SYTDQF Trigger: AAACTGGTCAGTGTAACTCCAAATTAAACTGCAGCT...CCTCTTAGAACAAGCAATCCCAATTATCTTATTAAAGAGTTCTAGGTAGAGGTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| 3UTR-3UTR CCA 90 bp | ACTACCTTAGAATGTTTAACACTAGTCTTGAAATTAGTAGGAAACTACCCGAGTCTAAAAGTCTTCACTTaGAACAAAATCTGTGTCCTA | + |
|
Preference number: 2 (lower is better) Translates to: TTLECLTLVLKLVGNYPSLKVFT*NKICVL Trigger: TAGGACACAGATTTTGTTCCAAGTGAAGACTTTTAG...ACTCGGGTAGTTTCCTACTAATTTCAAGACTAGTGTTAAACATTCTAAGGTAGT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079780.10 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| 3UTR TCA 72 bp | CTCCATGACAGCCCACCAGTGAGCACAGCAGCAGGGTaGGCACACATAGGACAATGGATGGGTAGTGCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: LHDSPPVSTAAG*AHIGQWMGSAG Trigger: ACCTGCACTACCCATCCATTGTCCTATGTGTGCTCACCCTGCTGCTGTGCTCACTGGTGGGCTGTCATGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164397.8 |
||
| 3UTR GCA 72 bp | GTCCTCATTCGGATGAACCTTTCATCACGTTCCTTCTaGATCACCTGCCTCCCTCCACCTCTACCTAGAACT | + |
|
Preference number: 3 (lower is better) Translates to: VLIRMNLSSRSF*ITCLPPPLPRT Trigger: AGTTCTAGGTAGAGGTGGAGGGAGGCAGGTGATGCAGAAGGAACGTGATGAAAGGTTCATCCGAATGAGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079780.10 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| 3UTR-3UTR CAA 90 bp | GAATACCCCTTAGTCCTTTCTGTGCTGGTGCACTGTTTGCATACCAGCCACATGTCTTTGTCTTCCCTTTaGGATGCTGAGCTATACCCC | + |
|
Preference number: 3 (lower is better) Translates to: EYPLVLSVLVHCLHTSHMSLSSL*DAELYP Trigger: GGGGTATAGCTCAGCATCCAAAAGGGAAGACAAAGA...CATGTGGCTGGTATGCAAACAGTGCACCAGCACAGAAAGGACTAAGGGGTATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079780.10 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| 3UTR GCA 72 bp | ACAAGACCTTATTGGAAGCGGCATTTGAGTATTGAGTaGCATGGTCTGGACTCCAAGCTGATGTTACAATTA | + |
|
Preference number: 3 (lower is better) Translates to: TRPYWKRHLSIE*HGLDSKLMLQL Trigger: TAATTGTAACATCAGCTTGGAGTCCAGACCATGGCACTCAATACTCAAATGCCGCTTCCAATAAGGTCTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079780.10 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| 3UTR CCA 72 bp | ACACTAAAACTGCAAGAGCTTTTTGTCATGGCATTCTaGACAAACAGCATTTCCCACAGTCACAGCATAGCT | + |
|
Preference number: 3 (lower is better) Translates to: TLKLQELFVMAF*TNSISHSHSIA Trigger: AGCTATGCTGTGACTGTGGGAAATGCTGTTTGTCCAGAATGCCATGACAAAAAGCTCTTGCAGTTTTAGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164397.8 |
||
| 3UTR TCA 72 bp | AATTATATACATTTTCCACATATGTCCTCATTCGGATaGACCTTTCATCACGTTCCTTCTGCATCACCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: NYIHFPHMSSFG*TFHHVPSASPA Trigger: GGCAGGTGATGCAGAAGGAACGTGATGAAAGGTTCATCCGAATGAGGACATATGTGGAAAATGTATATAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079780.10 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTTTCAAGCTAAAAGTCTTCACTTGGAACAAAATCTGTGTCCTACAAGACCTTACTTTTATTGCTTCTTaGTCTTCCCTTTTGGATGCT | + |
|
Preference number: 3 (lower is better) Translates to: TFKLKVFTWNKICVLQDLTFIAS*SSLLDA Trigger: AGCATCCAAAAGGGAAGACAAAGAAGCAATAAAAGT...AAGGTCTTGTAGGACACAGATTTTGTTCCAAGTGAAGACTTTTAGCTTGAAAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000079780.10 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTACCTTAGAATGTTTAACACTAGTCTTGAAATTAGTAGGAAACTACCCGAGTGCTAAAAGTCTTCACTaGGAACAAAATCTGTGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: TTLECLTLVLKLVGNYPSAKSLH*EQNLCP Trigger: AGGACACAGATTTTGTTCCAAGTGAAGACTTTTAGC...ACTCGGGTAGTTTCCTACTAATTTCAAGACTAGTGTTAAACATTCTAAGGTAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079780.10 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS-3UTR CCA 90 bp | GAATACCCCTTAGTCCTTTCTGTGCTGGTGCACTGTTTGCATACCAGCCACATGTGGCAGCTACATCTCTaGAGACAACATAGGCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: EYPLVLSVLVHCLHTSHMWQLHL*RQHRQH Trigger: GTGCTGCCTATGTTGTCTCCAGAGATGTAGCTGCCA...CATGTGGCTGGTATGCAAACAGTGCACCAGCACAGAAAGGACTAAGGGGTATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079780.10 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS-3UTR CCA 90 bp | GAATACCCCTTAGTCCTTTCTGTGCTGGTGCACTGTTTGCATACCAGCCACATGCCAGAGAAAAATACATaGTCCTGTGGCAAGATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: EYPLVLSVLVHCLHTSHMPEKNT*SCGKIP Trigger: GGGAATCTTGCCACAGGACCATGTATTTTTCTCTGG...CATGTGGCTGGTATGCAAACAGTGCACCAGCACAGAAAGGACTAAGGGGTATTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079780.10 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS-3UTR GCA 90 bp | GAATACCCCTTAGTCCTTTCTGTGCTGGTGCACTGTTTGCATACCAGCCACATGTCATCTTTTCATAGATaGAGGGGTGATAAGGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: EYPLVLSVLVHCLHTSHMSSFHR*RGDKEF Trigger: AAATTCCTTATCACCCCTGCATCTATGAAAAGATGA...CATGTGGCTGGTATGCAAACAGTGCACCAGCACAGAAAGGACTAAGGGGTATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000079780.10 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS-3UTR CCA 90 bp | TATCTTCCCCAAACTATTATTTTGATATCAAGGCTTCTCAGGTGTTCTCCATACTGGCAGCTACATCTCTaGAGACAACATAGGCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: YLPQTIILISRLLRCSPYWQLHL*RQHRQH Trigger: GTGCTGCCTATGTTGTCTCCAGAGATGTAGCTGCCA...GTATGGAGAACACCTGAGAAGCCTTGATATCAAAATAATAGTTTGGGGAAGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS-3UTR CCA 90 bp | ACTTTCAAGCTAAAAGTCTTCACTTGGAACAAAATCTGTGTCCTACAAGACCTTTGGCAGCTACATCTCTaGAGACAACATAGGCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: TFKLKVFTWNKICVLQDLWQLHL*RQHRQH Trigger: GTGCTGCCTATGTTGTCTCCAGAGATGTAGCTGCCA...AAGGTCTTGTAGGACACAGATTTTGTTCCAAGTGAAGACTTTTAGCTTGAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079780.10 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS-3UTR CCA 90 bp | TTATTGCTTCTTTGTCTTCCCTTTTGGATGCTGAGCTATACCCCTAGTTCTATCCCAGAGAAAAATACATaGTCCTGTGGCAAGATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LLLLCLPFWMLSYTPSSIPEKNT*SCGKIP Trigger: GGGAATCTTGCCACAGGACCATGTATTTTTCTCTGG...GATAGAACTAGGGGTATAGCTCAGCATCCAAAAGGGAAGACAAAGAAGCAATAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000079780.10 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS-3UTR TCA 90 bp | TTCTCAGGTGTTCTCCATACCTTAAATACATGTGTAGAACCAAATGAGAACTTGGCACAGAGCTGTGCTTaGGAGACAGGGAATTGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: FSGVLHTLNTCVEPNENLAQSCA*ETGNCL Trigger: TAAACAATTCCCTGTCTCTCAAGCACAGCTCTGTGC...CAAGTTCTCATTTGGTTCTACACATGTATTTAAGGTATGGAGAACACCTGAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS-3UTR TCA 90 bp | TATCTTCCCCAAACTATTATTTTGATATCAAGGCTTCTCAGGTGTTCTCCATACGCACAGAGCTGTGCTTaGGAGACAGGGAATTGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: YLPQTIILISRLLRCSPYAQSCA*ETGNCL Trigger: TAAACAATTCCCTGTCTCTCAAGCACAGCTCTGTGC...GTATGGAGAACACCTGAGAAGCCTTGATATCAAAATAATAGTTTGGGGAAGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS-3UTR TCA 90 bp | CTCCACCTCTACCTAGAACTCTTTAATAAGATAATTGGGATTGCTTGTTCTAAGGCACAGAGCTGTGCTTaGGAGACAGGGAATTGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LHLYLELFNKIIGIACSKAQSCA*ETGNCL Trigger: TAAACAATTCCCTGTCTCTCAAGCACAGCTCTGTGC...CTTAGAACAAGCAATCCCAATTATCTTATTAAAGAGTTCTAGGTAGAGGTGGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS-3UTR GCA 90 bp | CAAGGCTTCTCAGGTGTTCTCCATACCTTAAATACATGTGTAGAACCAAATGAGTGGACAAAAGGTATTTaGCCAGCTGAACTGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QGFSGVLHTLNTCVEPNEWTKGI*PAELKK Trigger: CTTCTTCAGTTCAGCTGGGCAAATACCTTTTGTCCA...CTCATTTGGTTCTACACATGTATTTAAGGTATGGAGAACACCTGAGAAGCCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS-3UTR GCA 90 bp | TTATTGCTTCTTTGTCTTCCCTTTTGGATGCTGAGCTATACCCCTAGTTCTATCTGGACAAAAGGTATTTaGCCAGCTGAACTGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLLLCLPFWMLSYTPSSIWTKGI*PAELKK Trigger: CTTCTTCAGTTCAGCTGGGCAAATACCTTTTGTCCA...GATAGAACTAGGGGTATAGCTCAGCATCCAAAAGGGAAGACAAAGAAGCAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000079780.10 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS-3UTR TCA 90 bp | CCTCATTGTAAGCTGCATCCAAACAACTACCTTAAACAGAGGCCAATATCTAGTTTTGCCCAGCTGAACTaGAGAAGGAATTTAGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: PHCKLHPNNYLKQRPISSFAQLN*RRNLEV Trigger: TACTTCTAAATTCCTTCTTCAGTTCAGCTGGGCAAA...ACTAGATATTGGCCTCTGTTTAAGGTAGTTGTTTGGATGCAGCTTACAATGAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079780.10 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS-3UTR TCA 90 bp | CCCCAAACTATTATTTTGATATCAAGGCTTCTCAGGTGTTCTCCATACCTTAAATGGCACAGAGGCCCATaGATACATCATCTATGTACA | + |
|
Preference number: 4 (lower is better) Translates to: PQTIILISRLLRCSPYLKWHRGP*IHHLCT Trigger: TGTACATAGATGATGTATTCATGGGCCTCTGTGCCA...TTTAAGGTATGGAGAACACCTGAGAAGCCTTGATATCAAAATAATAGTTTGGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS-3UTR TCA 90 bp | TTCTCAGGTGTTCTCCATACCTTAAATACATGTGTAGAACCAAATGAGAACTTGTGGCACAGAGGCCCATaGATACATCATCTATGTACA | + |
|
Preference number: 4 (lower is better) Translates to: FSGVLHTLNTCVEPNENLWHRGP*IHHLCT Trigger: TGTACATAGATGATGTATTCATGGGCCTCTGTGCCA...CAAGTTCTCATTTGGTTCTACACATGTATTTAAGGTATGGAGAACACCTGAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS-3UTR TCA 90 bp | TATCTTCCCCAAACTATTATTTTGATATCAAGGCTTCTCAGGTGTTCTCCATACTGGCACAGAGGCCCATaGATACATCATCTATGTACA | + |
|
Preference number: 4 (lower is better) Translates to: YLPQTIILISRLLRCSPYWHRGP*IHHLCT Trigger: TGTACATAGATGATGTATTCATGGGCCTCTGTGCCA...GTATGGAGAACACCTGAGAAGCCTTGATATCAAAATAATAGTTTGGGGAAGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS-3UTR TCA 90 bp | ATTGTAAGCTGCATCCAAACAACTACCTTAAACAGAGGCCAATATCTAGTGTTTTGGCACAGAGGCCCATaGATACATCATCTATGTACA | + |
|
Preference number: 4 (lower is better) Translates to: IVSCIQTTTLNRGQYLVFWHRGP*IHHLCT Trigger: TGTACATAGATGATGTATTCATGGGCCTCTGTGCCA...AAACACTAGATATTGGCCTCTGTTTAAGGTAGTTGTTTGGATGCAGCTTACAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079780.10 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS-3UTR CCA 90 bp | CCTCATTGTAAGCTGCATCCAAACAACTACCTTAAACAGAGGCCAATATCTAGTCAGTCATCAGGAATTTaGCATGTGGACAAAAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: PHCKLHPNNYLKQRPISSQSSGI*HVDKRY Trigger: ATACCTTTTGTCCACATGCCAAATTCCTGATGACTG...ACTAGATATTGGCCTCTGTTTAAGGTAGTTGTTTGGATGCAGCTTACAATGAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079780.10 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS-3UTR CCA 90 bp | TCTCAGGTATCTTCCCCAAACTATTATTTTGATATCAAGGCTTCTCAGGTGTTCATGCCTCATAGATTTTaGCAGCTACATCTCTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SQVSSPNYYFDIKASQVFMPHRF*QLHLWR Trigger: TCTCCAGAGATGTAGCTGCCAAAATCTATGAGGCAT...GAACACCTGAGAAGCCTTGATATCAAAATAATAGTTTGGGGAAGATACCTGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS-3UTR CCA 90 bp | CTCCACCTCTACCTAGAACTCTTTAATAAGATAATTGGGATTGCTTGTTCTAAGCCAGAGAAAAATACATaGTCCTGTGGCAAGATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LHLYLELFNKIIGIACSKPEKNT*SCGKIP Trigger: GGGAATCTTGCCACAGGACCATGTATTTTTCTCTGG...CTTAGAACAAGCAATCCCAATTATCTTATTAAAGAGTTCTAGGTAGAGGTGGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS-3UTR GCA 90 bp | CACCTCTACCTAGAACTCTTTAATAAGATAATTGGGATTGCTTGTTCTAAGAGGTGGACAAAAGGTATTTaGCCAGCTGAACTGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HLYLELFNKIIGIACSKRWTKGI*PAELKK Trigger: CTTCTTCAGTTCAGCTGGGCAAATACCTTTTGTCCA...CCTCTTAGAACAAGCAATCCCAATTATCTTATTAAAGAGTTCTAGGTAGAGGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS-3UTR CCA 90 bp | ACTTTCAAGCTAAAAGTCTTCACTTGGAACAAAATCTGTGTCCTACAAGACCTTATAGTCAGGGTAGGCTaGCCACTTGTACATTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: TFKLKVFTWNKICVLQDLIVRVG*PLVHFI Trigger: TATGAAATGTACAAGTGGCCAGCCTACCCTGACTAT...AAGGTCTTGTAGGACACAGATTTTGTTCCAAGTGAAGACTTTTAGCTTGAAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079780.10 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS-3UTR CCA 90 bp | CACCTCTACCTAGAACTCTTTAATAAGATAATTGGGATTGCTTGTTCTAAGAGGATAGTCAGGGTAGGCTaGCCACTTGTACATTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: HLYLELFNKIIGIACSKRIVRVG*PLVHFI Trigger: TATGAAATGTACAAGTGGCCAGCCTACCCTGACTAT...CCTCTTAGAACAAGCAATCCCAATTATCTTATTAAAGAGTTCTAGGTAGAGGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCAGGTGTTCTCCATACCTTAAATACATGTGTAGAACCAAATGAGAACTTGATGCCTCATAGATTTTaGCAGCTACATCTCTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FSGVLHTLNTCVEPNENLMPHRF*QLHLWR Trigger: TCTCCAGAGATGTAGCTGCCAAAATCTATGAGGCAT...CAAGTTCTCATTTGGTTCTACACATGTATTTAAGGTATGGAGAACACCTGAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS-3UTR CCA 90 bp | CTCCACCTCTACCTAGAACTCTTTAATAAGATAATTGGGATTGCTTGTTCTAAGATGCCTCATAGATTTTaGCAGCTACATCTCTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LHLYLELFNKIIGIACSKMPHRF*QLHLWR Trigger: TCTCCAGAGATGTAGCTGCCAAAATCTATGAGGCAT...CTTAGAACAAGCAATCCCAATTATCTTATTAAAGAGTTCTAGGTAGAGGTGGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS-3UTR CCA 90 bp | CCCCAAACTATTATTTTGATATCAAGGCTTCTCAGGTGTTCTCCATACCTTAAAATGCCTCATAGATTTTaGCAGCTACATCTCTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PQTIILISRLLRCSPYLKMPHRF*QLHLWR Trigger: TCTCCAGAGATGTAGCTGCCAAAATCTATGAGGCAT...TTTAAGGTATGGAGAACACCTGAGAAGCCTTGATATCAAAATAATAGTTTGGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS-3UTR TCA 90 bp | ACTTTCAAGCTAAAAGTCTTCACTTGGAACAAAATCTGTGTCCTACAAGACCTTATATCCTTGTACACTTaGTCTTCCCCGATTAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TFKLKVFTWNKICVLQDLISLYT*SSPISL Trigger: AAGACTAATCGGGGAAGATCAAGTGTACAAGGATAT...AAGGTCTTGTAGGACACAGATTTTGTTCCAAGTGAAGACTTTTAGCTTGAAAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000079780.10 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS-3UTR TCA 90 bp | TTCTCAGGTGTTCTCCATACCTTAAATACATGTGTAGAACCAAATGAGAACTTGATATCCTTGTACACTTaGTCTTCCCCGATTAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FSGVLHTLNTCVEPNENLISLYT*SSPISL Trigger: AAGACTAATCGGGGAAGATCAAGTGTACAAGGATAT...CAAGTTCTCATTTGGTTCTACACATGTATTTAAGGTATGGAGAACACCTGAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS-3UTR TCA 90 bp | CCCCAAACTATTATTTTGATATCAAGGCTTCTCAGGTGTTCTCCATACCTTAAATTTGCCCAGCTGAACTaGAGAAGGAATTTAGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: PQTIILISRLLRCSPYLKFAQLN*RRNLEV Trigger: TACTTCTAAATTCCTTCTTCAGTTCAGCTGGGCAAA...TTTAAGGTATGGAGAACACCTGAGAAGCCTTGATATCAAAATAATAGTTTGGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS-3UTR TCA 90 bp | CACCTCTACCTAGAACTCTTTAATAAGATAATTGGGATTGCTTGTTCTAAGAGGTTTGCCCAGCTGAACTaGAGAAGGAATTTAGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: HLYLELFNKIIGIACSKRFAQLN*RRNLEV Trigger: TACTTCTAAATTCCTTCTTCAGTTCAGCTGGGCAAA...CCTCTTAGAACAAGCAATCCCAATTATCTTATTAAAGAGTTCTAGGTAGAGGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS-3UTR TCA 90 bp | TATCTTCCCCAAACTATTATTTTGATATCAAGGCTTCTCAGGTGTTCTCCATACTTTGCCCAGCTGAACTaGAGAAGGAATTTAGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: YLPQTIILISRLLRCSPYFAQLN*RRNLEV Trigger: TACTTCTAAATTCCTTCTTCAGTTCAGCTGGGCAAA...GTATGGAGAACACCTGAGAAGCCTTGATATCAAAATAATAGTTTGGGGAAGATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS-3UTR TCA 90 bp | TATCTTCCCCAAACTATTATTTTGATATCAAGGCTTCTCAGGTGTTCTCCATACTCTTGTAAGTGTCCGTaGGATGTCATCATCTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: YLPQTIILISRLLRCSPYSCKCP*DVIIFS Trigger: TGAAAAGATGATGACATCTCACGGACACTTACAAGA...GTATGGAGAACACCTGAGAAGCCTTGATATCAAAATAATAGTTTGGGGAAGATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS-3UTR TCA 90 bp | CCCCAAACTATTATTTTGATATCAAGGCTTCTCAGGTGTTCTCCATACCTTAAATCTTGTAAGTGTCCGTaGGATGTCATCATCTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PQTIILISRLLRCSPYLKSCKCP*DVIIFS Trigger: TGAAAAGATGATGACATCTCACGGACACTTACAAGA...TTTAAGGTATGGAGAACACCTGAGAAGCCTTGATATCAAAATAATAGTTTGGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS-3UTR TCA 90 bp | ACTTTCAAGCTAAAAGTCTTCACTTGGAACAAAATCTGTGTCCTACAAGACCTTTCTTGTAAGTGTCCGTaGGATGTCATCATCTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TFKLKVFTWNKICVLQDLSCKCP*DVIIFS Trigger: TGAAAAGATGATGACATCTCACGGACACTTACAAGA...AAGGTCTTGTAGGACACAGATTTTGTTCCAAGTGAAGACTTTTAGCTTGAAAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000079780.10 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS-3UTR CCA 90 bp | CTCCACCTCTACCTAGAACTCTTTAATAAGATAATTGGGATTGCTTGTTCTAAGCAGTCATCAGGAATTTaGCATGTGGACAAAAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: LHLYLELFNKIIGIACSKQSSGI*HVDKRY Trigger: ATACCTTTTGTCCACATGCCAAATTCCTGATGACTG...CTTAGAACAAGCAATCCCAATTATCTTATTAAAGAGTTCTAGGTAGAGGTGGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCAGGTGTTCTCCATACCTTAAATACATGTGTAGAACCAAATGAGAACTTGCAGTCATCAGGAATTTaGCATGTGGACAAAAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: FSGVLHTLNTCVEPNENLQSSGI*HVDKRY Trigger: ATACCTTTTGTCCACATGCCAAATTCCTGATGACTG...CAAGTTCTCATTTGGTTCTACACATGTATTTAAGGTATGGAGAACACCTGAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS-3UTR GCA 90 bp | CCCCAAACTATTATTTTGATATCAAGGCTTCTCAGGTGTTCTCCATACCTTAAATCATCTTTTCATAGATaGAGGGGTGATAAGGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: PQTIILISRLLRCSPYLKSSFHR*RGDKEF Trigger: AAATTCCTTATCACCCCTGCATCTATGAAAAGATGA...TTTAAGGTATGGAGAACACCTGAGAAGCCTTGATATCAAAATAATAGTTTGGGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| 3UTR CAA 72 bp | TATATATTTCTCAGGTATCTTCCCCAAACTATTATTTaGATATCAAGGCTTCTCAGGTGTTCTCCATACCTT | + |
|
Preference number: 4 (lower is better) Translates to: YIFLRYLPQTII*ISRLLRCSPYL Trigger: AAGGTATGGAGAACACCTGAGAAGCCTTGATATCAAAATAATAGTTTGGGGAAGATACCTGAGAAATATATA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| 3UTR CAA 72 bp | CCTAAGATAACTACCTTAGAATGTTTAACACTAGTCTaGAAATTAGTAGGAAACTACCCGAGTAGGATAAAC | + |
|
Preference number: 4 (lower is better) Translates to: PKITTLECLTLV*KLVGNYPSRIN Trigger: GTTTATCCTACTCGGGTAGTTTCCTACTAATTTCAAGACTAGTGTTAAACATTCTAAGGTAGTTATCTTAGG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079780.10 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS CCA 90 bp | GAGGACATCTTGAGCCTGACACTTCTCTCTGTGGTTGATCAAGTATaGGTAGTGAGGCTGCACAGAGCTGTGCTTGAGAGACAGGGAATT | + |
|
Preference number: 5 (lower is better) Translates to: EDILSLTLLSVVDQV*VVRLHRAVLERQGI Trigger: AATTCCCTGTCTCTCAAGCACAGCTCTGTGCAGCCTCACTACCCATACTTGATCAACCACAGAGAGAAGTGTCAGGCTCAAGATGTCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS CCA 90 bp | AATTCAGTGTCTGCGATGCCTCATAGATTTTGGCAGCTACATCTCTaGAGACAACATAGGCAGCACCAGCTGTATAGTCAGGGTAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: NSVSAMPHRFWQLHL*RQHRQHQLYSQGRL Trigger: CAGCCTACCCTGACTATACAGCTGGTGCTGCCTATGTTGTCTCCAGAGATGTAGCTGCCAAAATCTATGAGGCATCGCAGACACTGAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS-3UTR CAA 90 bp | GAATACCCCTTAGTCCTTTCTGTGCTGGTGCACTGTTTGCATACCAGCCACATGGCAGTCATCAGGAATTaGGCATGTGGACAAAAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: EYPLVLSVLVHCLHTSHMAVIRN*ACGQKV Trigger: TACCTTTTGTCCACATGCCAAATTCCTGATGACTGC...CATGTGGCTGGTATGCAAACAGTGCACCAGCACAGAAAGGACTAAGGGGTATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079780.10 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS TCA 90 bp | CATGGTCCTGTGGCAAGATTCCCACTTTATTGGCACAGAGGCCCATaGATACATCATCTATGTACATACTGGAATTCAGTGTCTGCGATG | + |
|
Preference number: 5 (lower is better) Translates to: HGPVARFPLYWHRGP*IHHLCTYWNSVSAM Trigger: CATCGCAGACACTGAATTCCAGTATGTACATAGATGATGTATTCATGGGCCTCTGTGCCAATAAAGTGGGAATCTTGCCACAGGACCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS CCA 90 bp | TCTGGAGACAACATAGGCAGCACCAGCTGTATAGTCAGGGTAGGCTaGCCACTTGTACATTTCATAGGGAACATAGTATTTGCTGCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: SGDNIGSTSCIVRVG*PLVHFIGNIVFAAF Trigger: AAAAGCAGCAAATACTATGTTCCCTATGAAATGTACAAGTGGCCAGCCTACCCTGACTATACAGCTGGTGCTGCCTATGTTGTCTCCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS CCA 90 bp | CTATGTACATACTGGAATTCAGTGTCTGCGATGCCTCATAGATTTTaGCAGCTACATCTCTGGAGACAACATAGGCAGCACCAGCTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: LCTYWNSVSAMPHRF*QLHLWRQHRQHQLY Trigger: ATACAGCTGGTGCTGCCTATGTTGTCTCCAGAGATGTAGCTGCCAAAATCTATGAGGCATCGCAGACACTGAATTCCAGTATGTACATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS-3UTR CAA 90 bp | TTATTGCTTCTTTGTCTTCCCTTTTGGATGCTGAGCTATACCCCTAGTTCTATCTGCACAGAGCTGTGCTaGAGAGACAGGGAATTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LLLLCLPFWMLSYTPSSICTELC*RDRELF Trigger: AAACAATTCCCTGTCTCTCAAGCACAGCTCTGTGCA...GATAGAACTAGGGGTATAGCTCAGCATCCAAAAGGGAAGACAAAGAAGCAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079780.10 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS GCA 90 bp | CATGAATACATCATCTATGTACATACTGGAATTCAGTGTCTGCGATaGCTCATAGATTTTGGCAGCTACATCTCTGGAGACAACATAGGC | + |
|
Preference number: 5 (lower is better) Translates to: HEYIIYVHTGIQCLR*LIDFGSYISGDNIG Trigger: GCCTATGTTGTCTCCAGAGATGTAGCTGCCAAAATCTATGAGGCATCGCAGACACTGAATTCCAGTATGTACATAGATGATGTATTCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS-3UTR CAA 90 bp | TCTCAGGTATCTTCCCCAAACTATTATTTTGATATCAAGGCTTCTCAGGTGTTCTGCACAGAGCTGTGCTaGAGAGACAGGGAATTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SQVSSPNYYFDIKASQVFCTELC*RDRELF Trigger: AAACAATTCCCTGTCTCTCAAGCACAGCTCTGTGCA...GAACACCTGAGAAGCCTTGATATCAAAATAATAGTTTGGGGAAGATACCTGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS-3UTR CAA 90 bp | CAAGGCTTCTCAGGTGTTCTCCATACCTTAAATACATGTGTAGAACCAAATGAGAAGATTCCCACTTTATaGGCACAGAGGCCCATGAAT | + |
|
Preference number: 5 (lower is better) Translates to: QGFSGVLHTLNTCVEPNEKIPTL*AQRPMN Trigger: ATTCATGGGCCTCTGTGCCAATAAAGTGGGAATCTT...CTCATTTGGTTCTACACATGTATTTAAGGTATGGAGAACACCTGAGAAGCCTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS-3UTR CAA 90 bp | TTCTCAGGTGTTCTCCATACCTTAAATACATGTGTAGAACCAAATGAGAACTTGTGCACAGAGCTGTGCTaGAGAGACAGGGAATTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: FSGVLHTLNTCVEPNENLCTELC*RDRELF Trigger: AAACAATTCCCTGTCTCTCAAGCACAGCTCTGTGCA...CAAGTTCTCATTTGGTTCTACACATGTATTTAAGGTATGGAGAACACCTGAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS-3UTR CAA 90 bp | CCTCATTGTAAGCTGCATCCAAACAACTACCTTAAACAGAGGCCAATATCTAGTGATGTTGGCATTGAGTaGAGACTGAACATAGTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: PHCKLHPNNYLKQRPISSDVGIE*RLNIVL Trigger: GAGAACTATGTTCAGTCTCAACTCAATGCCAACATC...ACTAGATATTGGCCTCTGTTTAAGGTAGTTGTTTGGATGCAGCTTACAATGAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079780.10 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS GCA 90 bp | ATCATCAGCAGTCATCAGGAATTTGGCATGTGGACAAAAGGTATTTaGCCAGCTGAACTGAAGAAGGAATTTAGAAGTAAGATTGTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: IISSHQEFGMWTKGI*PAELKKEFRSKIVE Trigger: TTCCACAATCTTACTTCTAAATTCCTTCTTCAGTTCAGCTGGGCAAATACCTTTTGTCCACATGCCAAATTCCTGATGACTGCTGATGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS-3UTR CAA 90 bp | CACCTCTACCTAGAACTCTTTAATAAGATAATTGGGATTGCTTGTTCTAAGAGGGCAGTCATCAGGAATTaGGCATGTGGACAAAAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: HLYLELFNKIIGIACSKRAVIRN*ACGQKV Trigger: TACCTTTTGTCCACATGCCAAATTCCTGATGACTGC...CCTCTTAGAACAAGCAATCCCAATTATCTTATTAAAGAGTTCTAGGTAGAGGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS-3UTR CAA 90 bp | CTCCACCTCTACCTAGAACTCTTTAATAAGATAATTGGGATTGCTTGTTCTAAGGCAGTCATCAGGAATTaGGCATGTGGACAAAAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: LHLYLELFNKIIGIACSKAVIRN*ACGQKV Trigger: TACCTTTTGTCCACATGCCAAATTCCTGATGACTGC...CTTAGAACAAGCAATCCCAATTATCTTATTAAAGAGTTCTAGGTAGAGGTGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS-3UTR CAA 90 bp | TATCTTCCCCAAACTATTATTTTGATATCAAGGCTTCTCAGGTGTTCTCCATACGCAGTCATCAGGAATTaGGCATGTGGACAAAAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: YLPQTIILISRLLRCSPYAVIRN*ACGQKV Trigger: TACCTTTTGTCCACATGCCAAATTCCTGATGACTGC...GTATGGAGAACACCTGAGAAGCCTTGATATCAAAATAATAGTTTGGGGAAGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS-3UTR CAA 90 bp | TTCTCAGGTGTTCTCCATACCTTAAATACATGTGTAGAACCAAATGAGAACTTGAAGATTCCCACTTTATaGGCACAGAGGCCCATGAAT | + |
|
Preference number: 5 (lower is better) Translates to: FSGVLHTLNTCVEPNENLKIPTL*AQRPMN Trigger: ATTCATGGGCCTCTGTGCCAATAAAGTGGGAATCTT...CAAGTTCTCATTTGGTTCTACACATGTATTTAAGGTATGGAGAACACCTGAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS-3UTR CAA 90 bp | CTCCACCTCTACCTAGAACTCTTTAATAAGATAATTGGGATTGCTTGTTCTAAGAAGATTCCCACTTTATaGGCACAGAGGCCCATGAAT | + |
|
Preference number: 5 (lower is better) Translates to: LHLYLELFNKIIGIACSKKIPTL*AQRPMN Trigger: ATTCATGGGCCTCTGTGCCAATAAAGTGGGAATCTT...CTTAGAACAAGCAATCCCAATTATCTTATTAAAGAGTTCTAGGTAGAGGTGGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS-3UTR CAA 90 bp | ACTTTCAAGCTAAAAGTCTTCACTTGGAACAAAATCTGTGTCCTACAAGACCTTAAGATTCCCACTTTATaGGCACAGAGGCCCATGAAT | + |
|
Preference number: 5 (lower is better) Translates to: TFKLKVFTWNKICVLQDLKIPTL*AQRPMN Trigger: ATTCATGGGCCTCTGTGCCAATAAAGTGGGAATCTT...AAGGTCTTGTAGGACACAGATTTTGTTCCAAGTGAAGACTTTTAGCTTGAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079780.10 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS-3UTR CAA 90 bp | CCCCAAACTATTATTTTGATATCAAGGCTTCTCAGGTGTTCTCCATACCTTAAAGATGTTGGCATTGAGTaGAGACTGAACATAGTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: PQTIILISRLLRCSPYLKDVGIE*RLNIVL Trigger: GAGAACTATGTTCAGTCTCAACTCAATGCCAACATC...TTTAAGGTATGGAGAACACCTGAGAAGCCTTGATATCAAAATAATAGTTTGGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS TCA 90 bp | ATCAGGAATTTGGCATGTGGACAAAAGGTATTTGCCCAGCTGAACTaGAGAAGGAATTTAGAAGTAAGATTGTGGAAAGAATCAATGAAA | + |
|
Preference number: 5 (lower is better) Translates to: IRNLACGQKVFAQLN*RRNLEVRLWKESMK Trigger: TTTCATTGATTCTTTCCACAATCTTACTTCTAAATTCCTTCTTCAGTTCAGCTGGGCAAATACCTTTTGTCCACATGCCAAATTCCTGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS TCA 72 bp | GGAGGACATCTTGAGCCTGACACTTCTCTCTGTGGTTaGTCAAGTATGGGTAGTGAGGCTGCACAGAGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: GGHLEPDTSLCG*SSMGSEAAQSC Trigger: ACAGCTCTGTGCAGCCTCACTACCCATACTTGATCAACCACAGAGAGAAGTGTCAGGCTCAAGATGTCCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS CCA 72 bp | TTGAGCCTGACACTTCTCTCTGTGGTTGATCAAGTATaGGTAGTGAGGCTGCACAGAGCTGTGCTTGAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: LSLTLLSVVDQV*VVRLHRAVLER Trigger: TCTCTCAAGCACAGCTCTGTGCAGCCTCACTACCCATACTTGATCAACCACAGAGAGAAGTGTCAGGCTCAA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS CCA 72 bp | TACTGGAATTCAGTGTCTGCGATGCCTCATAGATTTTaGCAGCTACATCTCTGGAGACAACATAGGCAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: YWNSVSAMPHRF*QLHLWRQHRQH Trigger: GTGCTGCCTATGTTGTCTCCAGAGATGTAGCTGCCAAAATCTATGAGGCATCGCAGACACTGAATTCCAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS TCA 72 bp | TCAAGTATGGGTAGTGAGGCTGCACAGAGCTGTGCTTaGGAGACAGGGAATTGTTTACAAAGCCATAGCTAT | + |
|
Preference number: 6 (lower is better) Translates to: SSMGSEAAQSCA*ETGNCLQSHSY Trigger: ATAGCTATGGCTTTGTAAACAATTCCCTGTCTCTCAAGCACAGCTCTGTGCAGCCTCACTACCCATACTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS CAA 90 bp | TCCCCAGAGAAAAATACATGGTCCTGTGGCAAGATTCCCACTTTATaGGCACAGAGGCCCATGAATACATCATCTATGTACATACTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: SPEKNTWSCGKIPTL*AQRPMNTSSMYILE Trigger: TTCCAGTATGTACATAGATGATGTATTCATGGGCCTCTGTGCCAATAAAGTGGGAATCTTGCCACAGGACCATGTATTTTTCTCTGGGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS TCA 72 bp | GTGGCAAGATTCCCACTTTATTGGCACAGAGGCCCATaGATACATCATCTATGTACATACTGGAATTCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: VARFPLYWHRGP*IHHLCTYWNSV Trigger: CACTGAATTCCAGTATGTACATAGATGATGTATTCATGGGCCTCTGTGCCAATAAAGTGGGAATCTTGCCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS GCA 72 bp | ATCATCTATGTACATACTGGAATTCAGTGTCTGCGATaGCTCATAGATTTTGGCAGCTACATCTCTGGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: IIYVHTGIQCLR*LIDFGSYISGD Trigger: GTCTCCAGAGATGTAGCTGCCAAAATCTATGAGGCATCGCAGACACTGAATTCCAGTATGTACATAGATGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS CAA 72 bp | AAAAATACATGGTCCTGTGGCAAGATTCCCACTTTATaGGCACAGAGGCCCATGAATACATCATCTATGTAC | + |
|
Preference number: 6 (lower is better) Translates to: KNTWSCGKIPTL*AQRPMNTSSMY Trigger: GTACATAGATGATGTATTCATGGGCCTCTGTGCCAATAAAGTGGGAATCTTGCCACAGGACCATGTATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS GCA 72 bp | AGTCATCAGGAATTTGGCATGTGGACAAAAGGTATTTaGCCAGCTGAACTGAAGAAGGAATTTAGAAGTAAG | + |
|
Preference number: 6 (lower is better) Translates to: SHQEFGMWTKGI*PAELKKEFRSK Trigger: CTTACTTCTAAATTCCTTCTTCAGTTCAGCTGGGCAAATACCTTTTGTCCACATGCCAAATTCCTGATGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||
| CDS TCA 72 bp | ATCCAAAAGTCTCGAACTCCAATCTGCTCTAGCCCTTaGAGATATTCAATGAGATTTGGCATGTGGATAAAT | + |
|
Preference number: 6 (lower is better) Translates to: IQKSRTPICSSP*RYSMRFGMWIN Trigger: ATTTATCCACATGCCAAATCTCATTGAATATCTTCAAGGGCTAGAGCAGATTGGAGTTCGAGACTTTTGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079780.10 ENSMUST00000119468.2 ENSMUST00000121344.8 ENSMUST00000164397.8 |
||