Pregenerated sensors for B3GNT4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029431Ensembl transcript IDs: ENSMUST00000031384.6
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGCAGCGTCTTCCTTCGCTCCCTAGGCAGTGGGAGCTGGGGGCCCTaGGGTCCTAAGGCTCCCTGGCAGCTGACACTCCCATTCAGCACA | + |
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Preference number: 1 (lower is better) Translates to: CSVFLRSLGSGSWGP*GPKAPWQLTLPFST Trigger: TGTGCTGAATGGGAGTGTCAGCTGCCAGGGAGCCTTAGGACCCCAGGGCCCCCAGCTCCCACTGCCTAGGGAGCGAAGGAAGACGCTGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| 3UTR CCA 72 bp | TGCAGCGTCTTCCTTCGCTCCCTAGGCAGTGGGAGCTaGGGGCCCTGGGGTCCTAAGGCTCCCTGGCAGCTG | + |
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Preference number: 3 (lower is better) Translates to: CSVFLRSLGSGS*GPWGPKAPWQL Trigger: CAGCTGCCAGGGAGCCTTAGGACCCCAGGGCCCCCAGCTCCCACTGCCTAGGGAGCGAAGGAAGACGCTGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| 3UTR TCA 72 bp | GCTGGGGGCCCTGGGGTCCTAAGGCTCCCTGGCAGCTaGCACTCCCATTCAGCACATGCTAGAGAAGTTTGC | + |
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Preference number: 3 (lower is better) Translates to: AGGPGVLRLPGS*HSHSAHAREVC Trigger: GCAAACTTCTCTAGCATGTGCTGAATGGGAGTGTCAGCTGCCAGGGAGCCTTAGGACCCCAGGGCCCCCAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| 3UTR-3UTR CAA 90 bp | AATAAAGATCATTTCCTGCTGACCACCAGGGACCAGTTTTCAGAATTGTTTCTCGTCACTCTAAAGCTGTaGCTCCACCCACCCCTCGGG | + |
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Preference number: 3 (lower is better) Translates to: NKDHFLLTTRDQFSELFLVTLKL*LHPPLG Trigger: CCCGAGGGGTGGGTGGAGCAACAGCTTTAGAGTGAC...GAGAAACAATTCTGAAAACTGGTCCCTGGTGGTCAGCAGGAAATGATCTTTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| 3UTR TCA 72 bp | CCAGTTTTCAGAATTGTTTCTCCTGGTGATAGGAGTTaGGTCACTCTAAAGCTGTTGCTCCACCCACCCCTC | + |
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Preference number: 3 (lower is better) Translates to: PVFRIVSPGDRS*VTLKLLLHPPL Trigger: GAGGGGTGGGTGGAGCAACAGCTTTAGAGTGACTCAACTCCTATCACCAGGAGAAACAATTCTGAAAACTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| 3UTR TCA 72 bp | AAGGTTGTTAGCATAAAAATAAAGATCATTTCCTGCTaGCCACCAGGGACCAGTTTTCAGAATTGTTTCTCC | + |
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Preference number: 3 (lower is better) Translates to: KVVSIKIKIISC*PPGTSFQNCFS Trigger: GGAGAAACAATTCTGAAAACTGGTCCCTGGTGGTCAGCAGGAAATGATCTTTATTTTTATGCTAACAACCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS-3UTR CCA 90 bp | CGCTCCCTAGGCAGTGGGAGCTGGGGGCCCTGGGGTCCTAAGGCTCCCTGGCAGTCACCAGCGCCCACATaGTCCACATCTCCAGGGGGC | + |
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Preference number: 4 (lower is better) Translates to: RSLGSGSWGPWGPKAPWQSPAPT*STSPGG Trigger: GCCCCCTGGAGATGTGGACCATGTGGGCGCTGGTGA...CTGCCAGGGAGCCTTAGGACCCCAGGGCCCCCAGCTCCCACTGCCTAGGGAGCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS-3UTR TCA 90 bp | TGCAGCGTCTTCCTTCGCTCCCTAGGCAGTGGGAGCTGGGGGCCCTGGGGTCCTACATCTCCAGGGGGCTaGGACGGTGCACCAGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: CSVFLRSLGSGSWGPWGPTSPGG*DGAPAG Trigger: TCCTGCTGGTGCACCGTCTCAGCCCCCTGGAGATGT...AGGACCCCAGGGCCCCCAGCTCCCACTGCCTAGGGAGCGAAGGAAGACGCTGCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS-3UTR CCA 90 bp | CGCTCCCTAGGCAGTGGGAGCTGGGGGCCCTGGGGTCCTAAGGCTCCCTGGCAGGAGCACTGGCTATGGTaGGACCTTGGCAGTGCCAAG | + |
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Preference number: 4 (lower is better) Translates to: RSLGSGSWGPWGPKAPWQEHWLW*DLGSAK Trigger: CTTGGCACTGCCAAGGTCCCACCATAGCCAGTGCTC...CTGCCAGGGAGCCTTAGGACCCCAGGGCCCCCAGCTCCCACTGCCTAGGGAGCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS-3UTR CCA 90 bp | TGCAGCGTCTTCCTTCGCTCCCTAGGCAGTGGGAGCTGGGGGCCCTGGGGTCCTGGTGAGCACTGGCTATaGTGGGACCTTGGCAGTGCC | + |
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Preference number: 4 (lower is better) Translates to: CSVFLRSLGSGSWGPWGPGEHWL*WDLGSA Trigger: GGCACTGCCAAGGTCCCACCATAGCCAGTGCTCACC...AGGACCCCAGGGCCCCCAGCTCCCACTGCCTAGGGAGCGAAGGAAGACGCTGCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS-3UTR TCA 90 bp | AGCTGGGGGCCCTGGGGTCCTAAGGCTCCCTGGCAGCTGACACTCCCATTCAGCGTTAAGAAGAGGCGATaGCGGCTGGGCAGGGACAGG | + |
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Preference number: 4 (lower is better) Translates to: SWGPWGPKAPWQLTLPFSVKKRR*RLGRDR Trigger: CCTGTCCCTGCCCAGCCGTCATCGCCTCTTCTTAAC...GCTGAATGGGAGTGTCAGCTGCCAGGGAGCCTTAGGACCCCAGGGCCCCCAGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS-3UTR GCA 90 bp | AGCTGGGGGCCCTGGGGTCCTAAGGCTCCCTGGCAGCTGACACTCCCATTCAGCAACACCAGCTTCAGCTaGCGACCCCTAGCCCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: SWGPWGPKAPWQLTLPFSNTSFS*RPLAQL Trigger: GAGCTGGGCTAGGGGTCGGCAGCTGAAGCTGGTGTT...GCTGAATGGGAGTGTCAGCTGCCAGGGAGCCTTAGGACCCCAGGGCCCCCAGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS-3UTR TCA 90 bp | TGCAGCGTCTTCCTTCGCTCCCTAGGCAGTGGGAGCTGGGGGCCCTGGGGTCCTCGTCTCCCTTTAGTATaGAGTGGGCCTGTGTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: CSVFLRSLGSGSWGPWGPRLPLV*SGPVCR Trigger: CCTGCACACAGGCCCACTTCATACTAAAGGGAGACG...AGGACCCCAGGGCCCCCAGCTCCCACTGCCTAGGGAGCGAAGGAAGACGCTGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS-3UTR GCA 90 bp | GGGCCCTGGGGTCCTAAGGCTCCCTGGCAGCTGACACTCCCATTCAGCACATGCGCTGCGATCCAGCGCTaGACGTGCAGCTCCTTGAGA | + |
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Preference number: 4 (lower is better) Translates to: GPWGPKAPWQLTLPFSTCAAIQR*TCSSLR Trigger: TCTCAAGGAGCTGCACGTGCAGCGCTGGATCGCAGC...GCATGTGCTGAATGGGAGTGTCAGCTGCCAGGGAGCCTTAGGACCCCAGGGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS-3UTR CCA 90 bp | GGGCCCTGGGGTCCTAAGGCTCCCTGGCAGCTGACACTCCCATTCAGCACATGCGCCAAGAACTGCTGGTaGGCCTTGGAGCTGCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: GPWGPKAPWQLTLPFSTCAKNCW*ALELPA Trigger: AGCAGGCAGCTCCAAGGCCCACCAGCAGTTCTTGGC...GCATGTGCTGAATGGGAGTGTCAGCTGCCAGGGAGCCTTAGGACCCCAGGGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS-3UTR CCA 90 bp | CGCTCCCTAGGCAGTGGGAGCTGGGGGCCCTGGGGTCCTAAGGCTCCCTGGCAGAAGGCTCCAGCAAGATaGAGAAGTTTCGGCAGTGTC | + |
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Preference number: 4 (lower is better) Translates to: RSLGSGSWGPWGPKAPWQKAPAR*RSFGSV Trigger: GACACTGCCGAAACTTCTCCATCTTGCTGGAGCCTT...CTGCCAGGGAGCCTTAGGACCCCAGGGCCCCCAGCTCCCACTGCCTAGGGAGCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS-3UTR CCA 90 bp | TGGGGGCCCTGGGGTCCTAAGGCTCCCTGGCAGCTGACACTCCCATTCAGCACAGCTCTGCCTCCTCCATaGCCATGTGAAGATGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: WGPWGPKAPWQLTLPFSTALPPP*PCEDAS Trigger: TGAGGCATCTTCACATGGCCATGGAGGAGGCAGAGC...TGTGCTGAATGGGAGTGTCAGCTGCCAGGGAGCCTTAGGACCCCAGGGCCCCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS-3UTR CCA 90 bp | TGGGGGCCCTGGGGTCCTAAGGCTCCCTGGCAGCTGACACTCCCATTCAGCACAGTCTTGAAGCCAGCATaGTGTATGGGAGTCACCCCC | + |
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Preference number: 4 (lower is better) Translates to: WGPWGPKAPWQLTLPFSTVLKPA*CMGVTP Trigger: GGGGGTGACTCCCATACACCATGCTGGCTTCAAGAC...TGTGCTGAATGGGAGTGTCAGCTGCCAGGGAGCCTTAGGACCCCAGGGCCCCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS-3UTR GCA 90 bp | AGCTGGGGGCCCTGGGGTCCTAAGGCTCCCTGGCAGCTGACACTCCCATTCAGCGTAGTACCACAAGACTaGAGAACAGCACACAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: SWGPWGPKAPWQLTLPFSVVPQD*RTAHSP Trigger: TGGGCTGTGTGCTGTTCTGCAGTCTTGTGGTACTAC...GCTGAATGGGAGTGTCAGCTGCCAGGGAGCCTTAGGACCCCAGGGCCCCCAGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS-3UTR TCA 90 bp | TGGGGGCCCTGGGGTCCTAAGGCTCCCTGGCAGCTGACACTCCCATTCAGCACAAATATGAGCAGGCTGTaGCTTGATGACCAGGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: WGPWGPKAPWQLTLPFSTNMSRL*LDDQEQ Trigger: CTGCTCCTGGTCATCAAGTCACAGCCTGCTCATATT...TGTGCTGAATGGGAGTGTCAGCTGCCAGGGAGCCTTAGGACCCCAGGGCCCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS-3UTR TCA 90 bp | GGGCCCTGGGGTCCTAAGGCTCCCTGGCAGCTGACACTCCCATTCAGCACATGCGGATTCCAAATGTCTTaGAGCCAGCATGGTGTATGG | + |
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Preference number: 4 (lower is better) Translates to: GPWGPKAPWQLTLPFSTCGFQMS*SQHGVW Trigger: CCATACACCATGCTGGCTTCAAGACATTTGGAATCC...GCATGTGCTGAATGGGAGTGTCAGCTGCCAGGGAGCCTTAGGACCCCAGGGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS-3UTR CCA 90 bp | GATCATTTCCTGCTGACCACCAGGGACCAGTTTTCAGAATTGTTTCTCCTGGTGACTGCTGGTGGGCCTTaGAGCTGCCTGCTGGTATGC | + |
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Preference number: 4 (lower is better) Translates to: DHFLLTTRDQFSELFLLVTAGGP*SCLLVC Trigger: GCATACCAGCAGGCAGCTCCAAGGCCCACCAGCAGT...CACCAGGAGAAACAATTCTGAAAACTGGTCCCTGGTGGTCAGCAGGAAATGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS-3UTR GCA 90 bp | AATAAAGATCATTTCCTGCTGACCACCAGGGACCAGTTTTCAGAATTGTTTCTCCGGGGGCACAGGTCCTaGCACCCCCAGGAGGAACAC | + |
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Preference number: 4 (lower is better) Translates to: NKDHFLLTTRDQFSELFLRGHRS*HPQEEH Trigger: GTGTTCCTCCTGGGGGTGGCAGGACCTGTGCCCCCG...GAGAAACAATTCTGAAAACTGGTCCCTGGTGGTCAGCAGGAAATGATCTTTATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS-3UTR GCA 90 bp | GCTGACACTCCCATTCAGCACATGCTAGAGAAGTTTGCCAGGTTTCAGCACTTTATCCAGCGCTGCACGTaGAGCTCCTTGAGAGTCAGG | + |
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Preference number: 4 (lower is better) Translates to: ADTPIQHMLEKFARFQHFIQRCT*SSLRVR Trigger: CCTGACTCTCAAGGAGCTGCACGTGCAGCGCTGGAT...AAAGTGCTGAAACCTGGCAAACTTCTCTAGCATGTGCTGAATGGGAGTGTCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS-3UTR TCA 90 bp | GCTGACACTCCCATTCAGCACATGCTAGAGAAGTTTGCCAGGTTTCAGCACTTTTCCTCCATGGCCATGTaGAGATGCCTCACAGTAGCC | + |
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Preference number: 4 (lower is better) Translates to: ADTPIQHMLEKFARFQHFSSMAM*RCLTVA Trigger: GGCTACTGTGAGGCATCTTCACATGGCCATGGAGGA...AAAGTGCTGAAACCTGGCAAACTTCTCTAGCATGTGCTGAATGGGAGTGTCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS-3UTR GCA 90 bp | GATCATTTCCTGCTGACCACCAGGGACCAGTTTTCAGAATTGTTTCTCCTGGTGAGCTGCCTGCTGGTATaGGCTCCTTCAGAAGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: DHFLLTTRDQFSELFLLVSCLLV*APSEGA Trigger: TGCTCCTTCTGAAGGAGCGCATACCAGCAGGCAGCT...CACCAGGAGAAACAATTCTGAAAACTGGTCCCTGGTGGTCAGCAGGAAATGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS-3UTR CCA 90 bp | GATCATTTCCTGCTGACCACCAGGGACCAGTTTTCAGAATTGTTTCTCCTGGTGGCTATGGTGGGACCTTaGCAGTGCCAAGAACTGCTG | + |
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Preference number: 4 (lower is better) Translates to: DHFLLTTRDQFSELFLLVAMVGP*QCQELL Trigger: CAGCAGTTCTTGGCACTGCCAAGGTCCCACCATAGC...CACCAGGAGAAACAATTCTGAAAACTGGTCCCTGGTGGTCAGCAGGAAATGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS-3UTR GCA 90 bp | CACTCCCATTCAGCACATGCTAGAGAAGTTTGCCAGGTTTCAGCACTTTTAATTGTGGGACCTTGGCAGTaGCAAGAACTGCTGGTGGGC | + |
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Preference number: 4 (lower is better) Translates to: HSHSAHAREVCQVSALLIVGPWQ*QELLVG Trigger: GCCCACCAGCAGTTCTTGGCACTGCCAAGGTCCCAC...AATTAAAAGTGCTGAAACCTGGCAAACTTCTCTAGCATGTGCTGAATGGGAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS-3UTR GCA 90 bp | GATCATTTCCTGCTGACCACCAGGGACCAGTTTTCAGAATTGTTTCTCCTGGTGGGGCTTGTGGGTAGCTaGACACTTAAGCCTCTCATC | + |
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Preference number: 4 (lower is better) Translates to: DHFLLTTRDQFSELFLLVGLVGS*TLKPLI Trigger: GATGAGAGGCTTAAGTGTGCAGCTACCCACAAGCCC...CACCAGGAGAAACAATTCTGAAAACTGGTCCCTGGTGGTCAGCAGGAAATGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS-3UTR GCA 90 bp | AATAAAGATCATTTCCTGCTGACCACCAGGGACCAGTTTTCAGAATTGTTTCTCGGCCTTGGAGCTGCCTaGTGGTATGCGCTCCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: NKDHFLLTTRDQFSELFLGLGAA*WYALLQ Trigger: CTGAAGGAGCGCATACCAGCAGGCAGCTCCAAGGCC...GAGAAACAATTCTGAAAACTGGTCCCTGGTGGTCAGCAGGAAATGATCTTTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS-3UTR CCA 90 bp | CACTCCCATTCAGCACATGCTAGAGAAGTTTGCCAGGTTTCAGCACTTTTAATTAGCCAGCATGGTGTATaGGAGTCACCCCCAGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: HSHSAHAREVCQVSALLISQHGV*ESPPAS Trigger: GGAAGCTGGGGGTGACTCCCATACACCATGCTGGCT...AATTAAAAGTGCTGAAACCTGGCAAACTTCTCTAGCATGTGCTGAATGGGAGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS-3UTR TCA 90 bp | CACTCCCATTCAGCACATGCTAGAGAAGTTTGCCAGGTTTCAGCACTTTTAATTAAGGGTCCCTGGGATTaGGGGGCTGTTGGATTCCAA | + |
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Preference number: 4 (lower is better) Translates to: HSHSAHAREVCQVSALLIKGPWD*GAVGFQ Trigger: TTGGAATCCAACAGCCCCTCAATCCCAGGGACCCTT...AATTAAAAGTGCTGAAACCTGGCAAACTTCTCTAGCATGTGCTGAATGGGAGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS-3UTR GCA 90 bp | AAAAATAAAGATCATTTCCTGCTGACCACCAGGGACCAGTTTTCAGAATTGTTTCTGTGTGCAGGCAGCTaGGATCCAGCGCTGCACGTG | + |
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Preference number: 4 (lower is better) Translates to: KNKDHFLLTTRDQFSELFLCAGS*DPALHV Trigger: CACGTGCAGCGCTGGATCGCAGCTGCCTGCACACAG...AAACAATTCTGAAAACTGGTCCCTGGTGGTCAGCAGGAAATGATCTTTATTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS-3UTR GCA 90 bp | AAAAATAAAGATCATTTCCTGCTGACCACCAGGGACCAGTTTTCAGAATTGTTTAGGGGGCTGAGACGGTaGACCAGCAGGAGCCCTTTG | + |
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Preference number: 4 (lower is better) Translates to: KNKDHFLLTTRDQFSELFRGLRR*TSRSPL Trigger: CAAAGGGCTCCTGCTGGTGCACCGTCTCAGCCCCCT...AAACAATTCTGAAAACTGGTCCCTGGTGGTCAGCAGGAAATGATCTTTATTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS-3UTR CCA 90 bp | GCTGACACTCCCATTCAGCACATGCTAGAGAAGTTTGCCAGGTTTCAGCACTTTAGCACATTGGGAACATaGATAAAGACGTCATCGTCT | + |
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Preference number: 4 (lower is better) Translates to: ADTPIQHMLEKFARFQHFSTLGT*IKTSSS Trigger: AGACGATGACGTCTTTATCCATGTTCCCAATGTGCT...AAAGTGCTGAAACCTGGCAAACTTCTCTAGCATGTGCTGAATGGGAGTGTCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS-3UTR CCA 90 bp | AAAAATAAAGATCATTTCCTGCTGACCACCAGGGACCAGTTTTCAGAATTGTTTGGATTGAGGGGCTGTTaGATTCCAAATGTCTTGAAG | + |
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Preference number: 4 (lower is better) Translates to: KNKDHFLLTTRDQFSELFGLRGC*IPNVLK Trigger: CTTCAAGACATTTGGAATCCAACAGCCCCTCAATCC...AAACAATTCTGAAAACTGGTCCCTGGTGGTCAGCAGGAAATGATCTTTATTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS GCA 90 bp | GTCACCAGCGCCCACATGGTCCACATCTCCAGGGGGCTGAGACGGTaGACCAGCAGGAGCCCTTTGTACAGACAAGGGTCCCTGGGATTG | + |
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Preference number: 5 (lower is better) Translates to: VTSAHMVHISRGLRR*TSRSPLYRQGSLGL Trigger: CAATCCCAGGGACCCTTGTCTGTACAAAGGGCTCCTGCTGGTGCACCGTCTCAGCCCCCTGGAGATGTGGACCATGTGGGCGCTGGTGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS CCA 90 bp | GGCTATGGTGGGACCTTGGCAGTGCCAAGAACTGCTGGTGGGCCTTaGAGCTGCCTGCTGGTATGCGCTCCTTCAGAAGGAGCAGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: GYGGTLAVPRTAGGP*SCLLVCAPSEGAGS Trigger: GCTGCCTGCTCCTTCTGAAGGAGCGCATACCAGCAGGCAGCTCCAAGGCCCACCAGCAGTTCTTGGCACTGCCAAGGTCCCACCATAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS-3UTR CAA 90 bp | TGGGGGCCCTGGGGTCCTAAGGCTCCCTGGCAGCTGACACTCCCATTCAGCACAACTTTGGTGTTCCTGTaGGGCCGGGCCAAGCGAATG | + |
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Preference number: 5 (lower is better) Translates to: WGPWGPKAPWQLTLPFSTTLVFL*GRAKRM Trigger: CATTCGCTTGGCCCGGCCCAACAGGAACACCAAAGT...TGTGCTGAATGGGAGTGTCAGCTGCCAGGGAGCCTTAGGACCCCAGGGCCCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS TCA 90 bp | TCTCATCTGTCACCAGCGCCCACATGGTCCACATCTCCAGGGGGCTaGGACGGTGCACCAGCAGGAGCCCTTTGTACAGACAAGGGTCCC | + |
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Preference number: 5 (lower is better) Translates to: SHLSPAPTWSTSPGG*DGAPAGALCTDKGP Trigger: GGGACCCTTGTCTGTACAAAGGGCTCCTGCTGGTGCACCGTCTCAGCCCCCTGGAGATGTGGACCATGTGGGCGCTGGTGACAGATGAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS CCA 90 bp | GAGCACTGGCTATGGTGGGACCTTGGCAGTGCCAAGAACTGCTGGTaGGCCTTGGAGCTGCCTGCTGGTATGCGCTCCTTCAGAAGGAGC | + |
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Preference number: 5 (lower is better) Translates to: EHWLWWDLGSAKNCW*ALELPAGMRSFRRS Trigger: GCTCCTTCTGAAGGAGCGCATACCAGCAGGCAGCTCCAAGGCCCACCAGCAGTTCTTGGCACTGCCAAGGTCCCACCATAGCCAGTGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS CCA 90 bp | GGTGAGCACTGGCTATGGTGGGACCTTGGCAGTGCCAAGAACTGCTaGTGGGCCTTGGAGCTGCCTGCTGGTATGCGCTCCTTCAGAAGG | + |
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Preference number: 5 (lower is better) Translates to: GEHWLWWDLGSAKNC*WALELPAGMRSFRR Trigger: CCTTCTGAAGGAGCGCATACCAGCAGGCAGCTCCAAGGCCCACCAGCAGTTCTTGGCACTGCCAAGGTCCCACCATAGCCAGTGCTCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS-3UTR CAA 90 bp | CGCTCCCTAGGCAGTGGGAGCTGGGGGCCCTGGGGTCCTAAGGCTCCCTGGCAGTGGATTCCAAATGTCTaGAAGCCAGCATGGTGTATG | + |
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Preference number: 5 (lower is better) Translates to: RSLGSGSWGPWGPKAPWQWIPNV*KPAWCM Trigger: CATACACCATGCTGGCTTCAAGACATTTGGAATCCA...CTGCCAGGGAGCCTTAGGACCCCAGGGCCCCCAGCTCCCACTGCCTAGGGAGCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS GCA 90 bp | TTGGGTGAGCACTGGCTATGGTGGGACCTTGGCAGTGCCAAGAACTaGTGGTGGGCCTTGGAGCTGCCTGCTGGTATGCGCTCCTTCAGA | + |
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Preference number: 5 (lower is better) Translates to: LGEHWLWWDLGSAKN*WWALELPAGMRSFR Trigger: TCTGAAGGAGCGCATACCAGCAGGCAGCTCCAAGGCCCACCAGCAGTTCTTGGCACTGCCAAGGTCCCACCATAGCCAGTGCTCACCCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS CCA 90 bp | CTGTTGGGCCGGGCCAAGCGAATGACATCTCCCACTAGGAAGTCCTaGGCCGGATCCCAGCCCTCCAAGAACTCGAGCACATTGGGAACA | + |
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Preference number: 5 (lower is better) Translates to: LLGRAKRMTSPTRKS*AGSQPSKNSSTLGT Trigger: TGTTCCCAATGTGCTCGAGTTCTTGGAGGGCTGGGATCCGGCCCAGGACTTCCTAGTGGGAGATGTCATTCGCTTGGCCCGGCCCAACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS GCA 90 bp | AAGATGCCTCACAGTAGCCTGGGACATGACGTAGCCGCCGCCTCCTaGATAAGGTGGGTAGTGGCGGGCCCTGTACATGGAAAACGGGAT | + |
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Preference number: 5 (lower is better) Translates to: KMPHSSLGHDVAAAS*IRWVVAGPVHGKRD Trigger: ATCCCGTTTTCCATGTACAGGGCCCGCCACTACCCACCTTATGCAGGAGGCGGCGGCTACGTCATGTCCCAGGCTACTGTGAGGCATCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS CCA 90 bp | GGCAGGGACAGGGAGGTGTTAACAACTGTTAGGTTGGGTGAGCACTaGCTATGGTGGGACCTTGGCAGTGCCAAGAACTGCTGGTGGGCC | + |
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Preference number: 5 (lower is better) Translates to: GRDREVLTTVRLGEH*LWWDLGSAKNCWWA Trigger: GGCCCACCAGCAGTTCTTGGCACTGCCAAGGTCCCACCATAGCCAGTGCTCACCCAACCTAACAGTTGTTAACACCTCCCTGTCCCTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS TCA 90 bp | CCAGCCCGGCCCCAAGTGCTTCGAATGGCTGAACGCTGTTCAATATaGGCAGGCTGTGACTTGATGACCAGGAGCAGGAAGGTGTCCCTG | + |
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Preference number: 5 (lower is better) Translates to: PARPQVLRMAERCSI*AGCDLMTRSRKVSL Trigger: CAGGGACACCTTCCTGCTCCTGGTCATCAAGTCACAGCCTGCTCATATTGAACAGCGTTCAGCCATTCGAAGCACTTGGGGCCGGGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS CCA 90 bp | AGGGAGGTGTTAACAACTGTTAGGTTGGGTGAGCACTGGCTATGGTaGGACCTTGGCAGTGCCAAGAACTGCTGGTGGGCCTTGGAGCTG | + |
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Preference number: 5 (lower is better) Translates to: REVLTTVRLGEHWLW*DLGSAKNCWWALEL Trigger: CAGCTCCAAGGCCCACCAGCAGTTCTTGGCACTGCCAAGGTCCCACCATAGCCAGTGCTCACCCAACCTAACAGTTGTTAACACCTCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS CCA 90 bp | GACAGGGAGGTGTTAACAACTGTTAGGTTGGGTGAGCACTGGCTATaGTGGGACCTTGGCAGTGCCAAGAACTGCTGGTGGGCCTTGGAG | + |
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Preference number: 5 (lower is better) Translates to: DREVLTTVRLGEHWL*WDLGSAKNCWWALE Trigger: CTCCAAGGCCCACCAGCAGTTCTTGGCACTGCCAAGGTCCCACCATAGCCAGTGCTCACCCAACCTAACAGTTGTTAACACCTCCCTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS CCA 90 bp | GGAGCAGGAAGGTGTCCCTGGCACACTCCGAAGGCTCCAGCAAGATaGAGAAGTTTCGGCAGTGTCGATAGGTTAAGAAGAGGCGATGAC | + |
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Preference number: 5 (lower is better) Translates to: GAGRCPWHTPKAPAR*RSFGSVDRLRRGDD Trigger: GTCATCGCCTCTTCTTAACCTATCGACACTGCCGAAACTTCTCCATCTTGCTGGAGCCTTCGGAGTGTGCCAGGGACACCTTCCTGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS CCA 90 bp | CACAGTAGCCTGGGACATGACGTAGCCGCCGCCTCCTGCATAAGGTaGGTAGTGGCGGGCCCTGTACATGGAAAACGGGATGAAATATTT | + |
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Preference number: 5 (lower is better) Translates to: HSSLGHDVAAASCIR*VVAGPVHGKRDEIF Trigger: AAATATTTCATCCCGTTTTCCATGTACAGGGCCCGCCACTACCCACCTTATGCAGGAGGCGGCGGCTACGTCATGTCCCAGGCTACTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS-3UTR CAA 90 bp | TGGGGGCCCTGGGGTCCTAAGGCTCCCTGGCAGCTGACACTCCCATTCAGCACAATGAAATATTTAACTTaGGTGTTCCTGTTGGGCCGG | + |
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Preference number: 5 (lower is better) Translates to: WGPWGPKAPWQLTLPFSTMKYLT*VFLLGR Trigger: CCGGCCCAACAGGAACACCAAAGTTAAATATTTCAT...TGTGCTGAATGGGAGTGTCAGCTGCCAGGGAGCCTTAGGACCCCAGGGCCCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS CCA 90 bp | TGGGCCGGATCCCAGCCCTCCAAGAACTCGAGCACATTGGGAACATaGATAAAGACGTCATCGTCTCCCTTTAGTATGAAGTGGGCCTGT | + |
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Preference number: 5 (lower is better) Translates to: WAGSQPSKNSSTLGT*IKTSSSPFSMKWAC Trigger: ACAGGCCCACTTCATACTAAAGGGAGACGATGACGTCTTTATCCATGTTCCCAATGTGCTCGAGTTCTTGGAGGGCTGGGATCCGGCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS-3UTR CAA 90 bp | AGATCATTTCCTGCTGACCACCAGGGACCAGTTTTCAGAATTGTTTCTCCTGGTAACTGCTGGTGGGCCTaGGAGCTGCCTGCTGGTATG | + |
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Preference number: 5 (lower is better) Translates to: RSFPADHQGPVFRIVSPGNCWWA*ELPAGM Trigger: CATACCAGCAGGCAGCTCCAAGGCCCACCAGCAGTT...ACCAGGAGAAACAATTCTGAAAACTGGTCCCTGGTGGTCAGCAGGAAATGATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS-3UTR CAA 90 bp | AGATCATTTCCTGCTGACCACCAGGGACCAGTTTTCAGAATTGTTTCTCCTGGTTGCACGTGCAGCTCCTaGAGAGTCAGGTTAAAGAAG | + |
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Preference number: 5 (lower is better) Translates to: RSFPADHQGPVFRIVSPGCTCSS*RVRLKK Trigger: CTTCTTTAACCTGACTCTCAAGGAGCTGCACGTGCA...ACCAGGAGAAACAATTCTGAAAACTGGTCCCTGGTGGTCAGCAGGAAATGATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS-3UTR CAA 90 bp | AAAAATAAAGATCATTTCCTGCTGACCACCAGGGACCAGTTTTCAGAATTGTTTCAAGGGTCCCTGGGATaGAGGGGCTGTTGGATTCCA | + |
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Preference number: 5 (lower is better) Translates to: KNKDHFLLTTRDQFSELFQGSLG*RGCWIP Trigger: TGGAATCCAACAGCCCCTCAATCCCAGGGACCCTTG...AAACAATTCTGAAAACTGGTCCCTGGTGGTCAGCAGGAAATGATCTTTATTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS GCA 72 bp | CACAGTAGCCTGGGACATGACGTAGCCGCCGCCTCCTaGATAAGGTGGGTAGTGGCGGGCCCTGTACATGGA | + |
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Preference number: 6 (lower is better) Translates to: HSSLGHDVAAAS*IRWVVAGPVHG Trigger: TCCATGTACAGGGCCCGCCACTACCCACCTTATGCAGGAGGCGGCGGCTACGTCATGTCCCAGGCTACTGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS GCA 72 bp | GCCCACATGGTCCACATCTCCAGGGGGCTGAGACGGTaGACCAGCAGGAGCCCTTTGTACAGACAAGGGTCC | + |
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Preference number: 6 (lower is better) Translates to: AHMVHISRGLRR*TSRSPLYRQGS Trigger: GGACCCTTGTCTGTACAAAGGGCTCCTGCTGGTGCACCGTCTCAGCCCCCTGGAGATGTGGACCATGTGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS CCA 72 bp | TGGCTATGGTGGGACCTTGGCAGTGCCAAGAACTGCTaGTGGGCCTTGGAGCTGCCTGCTGGTATGCGCTCC | + |
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Preference number: 6 (lower is better) Translates to: WLWWDLGSAKNC*WALELPAGMRS Trigger: GGAGCGCATACCAGCAGGCAGCTCCAAGGCCCACCAGCAGTTCTTGGCACTGCCAAGGTCCCACCATAGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS GCA 72 bp | CAGTGCCAAGAACTGCTGGTGGGCCTTGGAGCTGCCTaGTGGTATGCGCTCCTTCAGAAGGAGCAGGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: QCQELLVGLGAA*WYALLQKEQAA Trigger: AGCTGCCTGCTCCTTCTGAAGGAGCGCATACCAGCAGGCAGCTCCAAGGCCCACCAGCAGTTCTTGGCACTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS GCA 72 bp | TTGGCAGTGCCAAGAACTGCTGGTGGGCCTTGGAGCTaGCTGCTGGTATGCGCTCCTTCAGAAGGAGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: LAVPRTAGGPWS*LLVCAPSEGAG Trigger: GCCTGCTCCTTCTGAAGGAGCGCATACCAGCAGGCAGCTCCAAGGCCCACCAGCAGTTCTTGGCACTGCCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS CCA 72 bp | GGGACCTTGGCAGTGCCAAGAACTGCTGGTGGGCCTTaGAGCTGCCTGCTGGTATGCGCTCCTTCAGAAGGA | + |
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Preference number: 6 (lower is better) Translates to: GTLAVPRTAGGP*SCLLVCAPSEG Trigger: TCCTTCTGAAGGAGCGCATACCAGCAGGCAGCTCCAAGGCCCACCAGCAGTTCTTGGCACTGCCAAGGTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS CCA 72 bp | CTATGGTGGGACCTTGGCAGTGCCAAGAACTGCTGGTaGGCCTTGGAGCTGCCTGCTGGTATGCGCTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: LWWDLGSAKNCW*ALELPAGMRSF Trigger: GAAGGAGCGCATACCAGCAGGCAGCTCCAAGGCCCACCAGCAGTTCTTGGCACTGCCAAGGTCCCACCATAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS CCA 72 bp | CGGGCCAAGCGAATGACATCTCCCACTAGGAAGTCCTaGGCCGGATCCCAGCCCTCCAAGAACTCGAGCACA | + |
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Preference number: 6 (lower is better) Translates to: RAKRMTSPTRKS*AGSQPSKNSST Trigger: TGTGCTCGAGTTCTTGGAGGGCTGGGATCCGGCCCAGGACTTCCTAGTGGGAGATGTCATTCGCTTGGCCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS CCA 72 bp | CTGGGACATGACGTAGCCGCCGCCTCCTGCATAAGGTaGGTAGTGGCGGGCCCTGTACATGGAAAACGGGAT | + |
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Preference number: 6 (lower is better) Translates to: LGHDVAAASCIR*VVAGPVHGKRD Trigger: ATCCCGTTTTCCATGTACAGGGCCCGCCACTACCCACCTTATGCAGGAGGCGGCGGCTACGTCATGTCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS CAA 72 bp | CTGGGCAGGGACAGGGAGGTGTTAACAACTGTTAGGTaGGGTGAGCACTGGCTATGGTGGGACCTTGGCAGT | + |
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Preference number: 6 (lower is better) Translates to: LGRDREVLTTVR*GEHWLWWDLGS Trigger: ACTGCCAAGGTCCCACCATAGCCAGTGCTCACCCAACCTAACAGTTGTTAACACCTCCCTGTCCCTGCCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS CAA 90 bp | AGACAAGGGTCCCTGGGATTGAGGGGCTGTTGGATTCCAAATGTCTaGAAGCCAGCATGGTGTATGGGAGTCACCCCCAGCTTCCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: RQGSLGLRGCWIPNV*KPAWCMGVTPSFLR Trigger: CCTGAGGAAGCTGGGGGTGACTCCCATACACCATGCTGGCTTCAAGACATTTGGAATCCAACAGCCCCTCAATCCCAGGGACCCTTGTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS CAA 90 bp | CGGTGCACCAGCAGGAGCCCTTTGTACAGACAAGGGTCCCTGGGATaGAGGGGCTGTTGGATTCCAAATGTCTTGAAGCCAGCATGGTGT | + |
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Preference number: 6 (lower is better) Translates to: RCTSRSPLYRQGSLG*RGCWIPNVLKPAWC Trigger: ACACCATGCTGGCTTCAAGACATTTGGAATCCAACAGCCCCTCAATCCCAGGGACCCTTGTCTGTACAAAGGGCTCCTGCTGGTGCACCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS TCA 72 bp | CTGCTGGTATGCGCTCCTTCAGAAGGAGCAGGCAGCTaGGCAGTAGTACCACAAGACTGCAGAACAGCACAC | + |
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Preference number: 6 (lower is better) Translates to: LLVCAPSEGAGS*AVVPQDCRTAH Trigger: GTGTGCTGTTCTGCAGTCTTGTGGTACTACTGCTCAGCTGCCTGCTCCTTCTGAAGGAGCGCATACCAGCAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS CCA 72 bp | TTAACAACTGTTAGGTTGGGTGAGCACTGGCTATGGTaGGACCTTGGCAGTGCCAAGAACTGCTGGTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: LTTVRLGEHWLW*DLGSAKNCWWA Trigger: GGCCCACCAGCAGTTCTTGGCACTGCCAAGGTCCCACCATAGCCAGTGCTCACCCAACCTAACAGTTGTTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS CCA 72 bp | AGGGGCTGTTGGATTCCAAATGTCTTGAAGCCAGCATaGTGTATGGGAGTCACCCCCAGCTTCCTCAGGCAC | + |
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Preference number: 6 (lower is better) Translates to: RGCWIPNVLKPA*CMGVTPSFLRH Trigger: GTGCCTGAGGAAGCTGGGGGTGACTCCCATACACCATGCTGGCTTCAAGACATTTGGAATCCAACAGCCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS CAA 72 bp | TCCCTGGGATTGAGGGGCTGTTGGATTCCAAATGTCTaGAAGCCAGCATGGTGTATGGGAGTCACCCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: SLGLRGCWIPNV*KPAWCMGVTPS Trigger: GCTGGGGGTGACTCCCATACACCATGCTGGCTTCAAGACATTTGGAATCCAACAGCCCCTCAATCCCAGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS CCA 72 bp | GTGTTAACAACTGTTAGGTTGGGTGAGCACTGGCTATaGTGGGACCTTGGCAGTGCCAAGAACTGCTGGTGG | + |
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Preference number: 6 (lower is better) Translates to: VLTTVRLGEHWL*WDLGSAKNCWW Trigger: CCACCAGCAGTTCTTGGCACTGCCAAGGTCCCACCATAGCCAGTGCTCACCCAACCTAACAGTTGTTAACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS CCA 72 bp | AGGGAGGTGTTAACAACTGTTAGGTTGGGTGAGCACTaGCTATGGTGGGACCTTGGCAGTGCCAAGAACTGC | + |
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Preference number: 6 (lower is better) Translates to: REVLTTVRLGEH*LWWDLGSAKNC Trigger: GCAGTTCTTGGCACTGCCAAGGTCCCACCATAGCCAGTGCTCACCCAACCTAACAGTTGTTAACACCTCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS CCA 72 bp | AGGTGTCCCTGGCACACTCCGAAGGCTCCAGCAAGATaGAGAAGTTTCGGCAGTGTCGATAGGTTAAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: RCPWHTPKAPAR*RSFGSVDRLRR Trigger: TCTTCTTAACCTATCGACACTGCCGAAACTTCTCCATCTTGCTGGAGCCTTCGGAGTGTGCCAGGGACACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS CAA 72 bp | AGCAGGAGCCCTTTGTACAGACAAGGGTCCCTGGGATaGAGGGGCTGTTGGATTCCAAATGTCTTGAAGCCA | + |
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Preference number: 6 (lower is better) Translates to: SRSPLYRQGSLG*RGCWIPNVLKP Trigger: TGGCTTCAAGACATTTGGAATCCAACAGCCCCTCAATCCCAGGGACCCTTGTCTGTACAAAGGGCTCCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS CAA 90 bp | AGGAAGTCCTGGGCCGGATCCCAGCCCTCCAAGAACTCGAGCACATaGGGAACATGGATAAAGACGTCATCGTCTCCCTTTAGTATGAAG | + |
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Preference number: 6 (lower is better) Translates to: RKSWAGSQPSKNSST*GTWIKTSSSPFSMK Trigger: CTTCATACTAAAGGGAGACGATGACGTCTTTATCCATGTTCCCAATGTGCTCGAGTTCTTGGAGGGCTGGGATCCGGCCCAGGACTTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS CAA 90 bp | CTGTACATGGAAAACGGGATGAAATATTTAACTTTGGTGTTCCTGTaGGGCCGGGCCAAGCGAATGACATCTCCCACTAGGAAGTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: LYMENGMKYLTLVFL*GRAKRMTSPTRKSW Trigger: CCAGGACTTCCTAGTGGGAGATGTCATTCGCTTGGCCCGGCCCAACAGGAACACCAAAGTTAAATATTTCATCCCGTTTTCCATGTACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS CCA 72 bp | TCCCAGCCCTCCAAGAACTCGAGCACATTGGGAACATaGATAAAGACGTCATCGTCTCCCTTTAGTATGAAG | + |
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Preference number: 6 (lower is better) Translates to: SQPSKNSSTLGT*IKTSSSPFSMK Trigger: CTTCATACTAAAGGGAGACGATGACGTCTTTATCCATGTTCCCAATGTGCTCGAGTTCTTGGAGGGCTGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS CAA 72 bp | GAAAACGGGATGAAATATTTAACTTTGGTGTTCCTGTaGGGCCGGGCCAAGCGAATGACATCTCCCACTAGG | + |
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Preference number: 6 (lower is better) Translates to: ENGMKYLTLVFL*GRAKRMTSPTR Trigger: CCTAGTGGGAGATGTCATTCGCTTGGCCCGGCCCAACAGGAACACCAAAGTTAAATATTTCATCCCGTTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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| CDS CAA 72 bp | GCCCTGTACATGGAAAACGGGATGAAATATTTAACTTaGGTGTTCCTGTTGGGCCGGGCCAAGCGAATGACA | + |
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Preference number: 6 (lower is better) Translates to: ALYMENGMKYLT*VFLLGRAKRMT Trigger: TGTCATTCGCTTGGCCCGGCCCAACAGGAACACCAAAGTTAAATATTTCATCCCGTTTTCCATGTACAGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031384.6 |
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