Pregenerated sensors for B3GNT2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051650Ensembl transcript IDs: ENSMUST00000055549.4, ENSMUST00000062844.11
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTTCAGCCTTCCCTCTTCACAAGGCAAGGGAAGGACTGAGGGCTTaGGAGCCCAGGGGCTACCTGCTCATGAAGGCTAATAGCCTCACA | + |
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Preference number: 1 (lower is better) Translates to: SSAFPLHKAREGLRA*EPRGYLLMKANSLT Trigger: TGTGAGGCTATTAGCCTTCATGAGCAGGTAGCCCCTGGGCTCCCAAGCCCTCAGTCCTTCCCTTGCCTTGTGAAGAGGGAAGGCTGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055549.4 ENSMUST00000062844.11 |
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| 3UTR-3UTR CCA 90 bp | ATGGCCATAAGCCCTGACAAGATGAACTACACGCACTGCGTGGCTTTCCTTGCAGAAGGACTGAGGGCTTaGGAGCCCAGGGGCTACCTG | + |
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Preference number: 2 (lower is better) Translates to: MAISPDKMNYTHCVAFLAEGLRA*EPRGYL Trigger: CAGGTAGCCCCTGGGCTCCCAAGCCCTCAGTCCTTC...TGCAAGGAAAGCCACGCAGTGCGTGTAGTTCATCTTGTCAGGGCTTATGGCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055549.4 ENSMUST00000062844.11 |
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| 3UTR-3UTR CCA 90 bp | ATGGCCATAAGCCCTGACAAGATGAACTACACGCACTGCGTGGCTTTCCTTGCATGTGAGAGCACACCATaGGAACTAGTCAGGCTAGGC | + |
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Preference number: 2 (lower is better) Translates to: MAISPDKMNYTHCVAFLACESTP*ELVRLG Trigger: GCCTAGCCTGACTAGTTCCCATGGTGTGCTCTCACA...TGCAAGGAAAGCCACGCAGTGCGTGTAGTTCATCTTGTCAGGGCTTATGGCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055549.4 ENSMUST00000062844.11 |
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| 3UTR-3UTR CCA 90 bp | CATGCTGGATCTGGGAGGAGATGGGGAGGTGAATACAATCAAAACACATTGTATGAAGGACTGAGGGCTTaGGAGCCCAGGGGCTACCTG | + |
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Preference number: 2 (lower is better) Translates to: HAGSGRRWGGEYNQNTLYEGLRA*EPRGYL Trigger: CAGGTAGCCCCTGGGCTCCCAAGCCCTCAGTCCTTC...ATACAATGTGTTTTGATTGTATTCACCTCCCCATCTCCTCCCAGATCCAGCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000055549.4 ENSMUST00000062844.11 |
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| 3UTR-3UTR GCA 90 bp | ATGGCCATAAGCCCTGACAAGATGAACTACACGCACTGCGTGGCTTTCCTTGCACATAACCACTCACCCTaGCATGCTGAGCTGTCTTCA | + |
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Preference number: 2 (lower is better) Translates to: MAISPDKMNYTHCVAFLAHNHSP*HAELSS Trigger: TGAAGACAGCTCAGCATGGCAGGGTGAGTGGTTATG...TGCAAGGAAAGCCACGCAGTGCGTGTAGTTCATCTTGTCAGGGCTTATGGCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055549.4 ENSMUST00000062844.11 |
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| 3UTR-3UTR GCA 90 bp | TGGCTGTCGGGCTACTCAGTCTCCAGTTGGCCATTAGGGAATCACACTCATGATCTGCGTGGCTTTCCTTaGATAAAGGAAGTAACGGTT | + |
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Preference number: 2 (lower is better) Translates to: WLSGYSVSSWPLGNHTHDLRGFP*IKEVTV Trigger: AACCGTTACTTCCTTTATGCAAGGAAAGCCACGCAG...ATCATGAGTGTGATTCCCTAATGGCCAACTGGAGACTGAGTAGCCCGACAGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055549.4 ENSMUST00000062844.11 |
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| 3UTR-3UTR GCA 90 bp | CATGCTGGATCTGGGAGGAGATGGGGAGGTGAATACAATCAAAACACATTGTATCTGCGTGGCTTTCCTTaGATAAAGGAAGTAACGGTT | + |
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Preference number: 2 (lower is better) Translates to: HAGSGRRWGGEYNQNTLYLRGFP*IKEVTV Trigger: AACCGTTACTTCCTTTATGCAAGGAAAGCCACGCAG...ATACAATGTGTTTTGATTGTATTCACCTCCCCATCTCCTCCCAGATCCAGCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055549.4 ENSMUST00000062844.11 |
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| 3UTR-3UTR CCA 90 bp | AAATACAATCACTTTATTTCCACTTTTTCCCAGTCCCCTGTAGCACAGGTGAGAGGATCTGGGAGGAGATaGGGAGGTGAATACAATCAA | + |
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Preference number: 2 (lower is better) Translates to: KYNHFISTFSQSPVAQVRGSGRR*GGEYNQ Trigger: TTGATTGTATTCACCTCCCCATCTCCTCCCAGATCC...TCTCACCTGTGCTACAGGGGACTGGGAAAAAGTGGAAATAAAGTGATTGTATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062844.11 |
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| 3UTR-3UTR GCA 90 bp | GAATTCCATTTCACAAAGCCACCAGGTTGTGTCCTACATATATATATATGTATGCATAACCACTCACCCTaGCATGCTGAGCTGTCTTCA | + |
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Preference number: 2 (lower is better) Translates to: EFHFTKPPGCVLHIYICMHNHSP*HAELSS Trigger: TGAAGACAGCTCAGCATGGCAGGGTGAGTGGTTATG...CATACATATATATATATGTAGGACACAACCTGGTGGCTTTGTGAAATGGAATTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055549.4 ENSMUST00000062844.11 |
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| 3UTR GCA 72 bp | ACCGGCAGCCAGAGGAAGGGTCATAACCACTCACCCTaGCATGCTGAGCTGTCTTCAGCCTTCCCTCTTCAC | + |
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Preference number: 3 (lower is better) Translates to: TGSQRKGHNHSP*HAELSSAFPLH Trigger: GTGAAGAGGGAAGGCTGAAGACAGCTCAGCATGGCAGGGTGAGTGGTTATGACCCTTCCTCTGGCTGCCGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055549.4 ENSMUST00000062844.11 |
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| 3UTR TCA 72 bp | GATAATATGGCAAGAATAGAATCTTGGGGTTTTAACTaGCTAATCACGTCCAAAGCTCAGAAGTGGCGAATG | + |
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Preference number: 3 (lower is better) Translates to: DNMARIESWGFN*LITSKAQKWRM Trigger: CATTCGCCACTTCTGAGCTTTGGACGTGATTAGTCAGTTAAAACCCCAAGATTCTATTCTTGCCATATTATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055549.4 ENSMUST00000062844.11 |
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| CDS-3UTR TCA 90 bp | ACCGGCAGCCAGAGGAAGGGTCATAACCACTCACCCTGCCATGCTGAGCTGTCTGCTAGCTCCCCTGTCTaGTTGGCCACCCTGTTCAAG | + |
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Preference number: 4 (lower is better) Translates to: TGSQRKGHNHSPCHAELSASSPV*LATLFK Trigger: CTTGAACAGGGTGGCCAATCAGACAGGGGAGCTAGC...AGACAGCTCAGCATGGCAGGGTGAGTGGTTATGACCCTTCCTCTGGCTGCCGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055549.4 ENSMUST00000062844.11 |
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| CDS-3UTR CCA 90 bp | CTCACCTATTGTGAGAGCACACCATGGGAACTAGTCAGGCTAGGCCTTTCTGTGACCCCCGGCATACGGTaGGTAGACGCCGGTGTAGAA | + |
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Preference number: 4 (lower is better) Translates to: LTYCESTPWELVRLGLSVTPGIR*VDAGVE Trigger: TTCTACACCGGCGTCTACCCACCGTATGCCGGGGGT...CACAGAAAGGCCTAGCCTGACTAGTTCCCATGGTGTGCTCTCACAATAGGTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055549.4 ENSMUST00000062844.11 |
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| CDS-3UTR CCA 90 bp | ACCGGCAGCCAGAGGAAGGGTCATAACCACTCACCCTGCCATGCTGAGCTGTCTGCCTTTGTGCTTCTCTaGAACAAGGCCCAGTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: TGSQRKGHNHSPCHAELSAFVLL*NKAQFL Trigger: CAGAAACTGGGCCTTGTTCCAGAGAAGCACAAAGGC...AGACAGCTCAGCATGGCAGGGTGAGTGGTTATGACCCTTCCTCTGGCTGCCGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055549.4 ENSMUST00000062844.11 |
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| CDS-3UTR GCA 90 bp | CTCACCTATTGTGAGAGCACACCATGGGAACTAGTCAGGCTAGGCCTTTCTGTGAGTATGCCCGGGGAGTaGTGGGTGGCTTCCAGAACT | + |
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Preference number: 4 (lower is better) Translates to: LTYCESTPWELVRLGLSVSMPGE*WVASRT Trigger: AGTTCTGGAAGCCACCCAGCACTCCCCGGGCATACT...CACAGAAAGGCCTAGCCTGACTAGTTCCCATGGTGTGCTCTCACAATAGGTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055549.4 ENSMUST00000062844.11 |
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| CDS-3UTR GCA 90 bp | TGGCTGTCGGGCTACTCAGTCTCCAGTTGGCCATTAGGGAATCACACTCATGATCCTCTGGGGGTGTCTTaGCCAACAGGAAGACCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: WLSGYSVSSWPLGNHTHDPLGVS*PTGRPS Trigger: TGAGGGTCTTCCTGTTGGGCAAGACACCCCCAGAGG...ATCATGAGTGTGATTCCCTAATGGCCAACTGGAGACTGAGTAGCCCGACAGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055549.4 ENSMUST00000062844.11 |
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| CDS-3UTR CCA 90 bp | ACCGGCAGCCAGAGGAAGGGTCATAACCACTCACCCTGCCATGCTGAGCTGTCTCACATGAGGATGTCCTaGTGCTTGTCACTCTCAAAC | + |
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Preference number: 4 (lower is better) Translates to: TGSQRKGHNHSPCHAELSHMRMS*CLSLSN Trigger: GTTTGAGAGTGACAAGCACCAGGACATCCTCATGTG...AGACAGCTCAGCATGGCAGGGTGAGTGGTTATGACCCTTCCTCTGGCTGCCGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055549.4 ENSMUST00000062844.11 |
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| CDS-3UTR GCA 90 bp | TATTGTGAGAGCACACCATGGGAACTAGTCAGGCTAGGCCTTTCTGTGAAATGCTTCCCTGTTCCAGTATaGCCGGGGAGTGCTGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: YCESTPWELVRLGLSVKCFPVPV*PGSAGW Trigger: CCACCCAGCACTCCCCGGGCATACTGGAACAGGGAA...GCATTTCACAGAAAGGCCTAGCCTGACTAGTTCCCATGGTGTGCTCTCACAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055549.4 ENSMUST00000062844.11 |
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| CDS-3UTR TCA 90 bp | CTCACCTATTGTGAGAGCACACCATGGGAACTAGTCAGGCTAGGCCTTTCTGTGCGTCATCATCGCCCTTaGAGACAAACTCTGCGTCTG | + |
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Preference number: 4 (lower is better) Translates to: LTYCESTPWELVRLGLSVRHHRP*RQTLRL Trigger: CAGACGCAGAGTTTGTCTTCAAGGGCGATGATGACG...CACAGAAAGGCCTAGCCTGACTAGTTCCCATGGTGTGCTCTCACAATAGGTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055549.4 ENSMUST00000062844.11 |
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| CDS-3UTR TCA 90 bp | ACCGGCAGCCAGAGGAAGGGTCATAACCACTCACCCTGCCATGCTGAGCTGTCTTTAGGACTTTGCAACTaGGACCAGATATCAATCATC | + |
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Preference number: 4 (lower is better) Translates to: TGSQRKGHNHSPCHAELSLGLCN*DQISII Trigger: GATGATTGATATCTGGTCTCAGTTGCAAAGTCCTAA...AGACAGCTCAGCATGGCAGGGTGAGTGGTTATGACCCTTCCTCTGGCTGCCGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055549.4 ENSMUST00000062844.11 |
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| CDS-3UTR TCA 90 bp | TGGCTGTCGGGCTACTCAGTCTCCAGTTGGCCATTAGGGAATCACACTCATGATCTCTATAGTTCCACATaGGGATGTCCTGGTGCTTGT | + |
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Preference number: 4 (lower is better) Translates to: WLSGYSVSSWPLGNHTHDLYSST*GCPGAC Trigger: ACAAGCACCAGGACATCCTCATGTGGAACTATAGAG...ATCATGAGTGTGATTCCCTAATGGCCAACTGGAGACTGAGTAGCCCGACAGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055549.4 ENSMUST00000062844.11 |
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| CDS-3UTR GCA 90 bp | TGGCTGTCGGGCTACTCAGTCTCCAGTTGGCCATTAGGGAATCACACTCATGATGACTCCCGAATTGCTTaGCTTCTGGCAAAATGTGGA | + |
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Preference number: 4 (lower is better) Translates to: WLSGYSVSSWPLGNHTHDDSRIA*LLAKCG Trigger: TCCACATTTTGCCAGAAGGCAAGCAATTCGGGAGTC...ATCATGAGTGTGATTCCCTAATGGCCAACTGGAGACTGAGTAGCCCGACAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055549.4 ENSMUST00000062844.11 |
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| CDS-3UTR GCA 90 bp | CATGCTGGATCTGGGAGGAGATGGGGAGGTGAATACAATCAAAACACATTGTATCCTCTGGGGGTGTCTTaGCCAACAGGAAGACCCTCA | + |
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Preference number: 4 (lower is better) Translates to: HAGSGRRWGGEYNQNTLYPLGVS*PTGRPS Trigger: TGAGGGTCTTCCTGTTGGGCAAGACACCCCCAGAGG...ATACAATGTGTTTTGATTGTATTCACCTCCCCATCTCCTCCCAGATCCAGCATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000055549.4 ENSMUST00000062844.11 |
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| CDS-3UTR GCA 90 bp | ATGGCCATAAGCCCTGACAAGATGAACTACACGCACTGCGTGGCTTTCCTTGCACTTGAAGACAAACTCTaGGTCTGGACAGGAAGTGCT | + |
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Preference number: 4 (lower is better) Translates to: MAISPDKMNYTHCVAFLALEDKL*VWTGSA Trigger: AGCACTTCCTGTCCAGACGCAGAGTTTGTCTTCAAG...TGCAAGGAAAGCCACGCAGTGCGTGTAGTTCATCTTGTCAGGGCTTATGGCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055549.4 ENSMUST00000062844.11 |
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| CDS-3UTR CCA 90 bp | CTCACCTATTGTGAGAGCACACCATGGGAACTAGTCAGGCTAGGCCTTTCTGTGCCACCCTGTTCAAGATaGGATTGTACCACCTGTTCA | + |
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Preference number: 4 (lower is better) Translates to: LTYCESTPWELVRLGLSVPPCSR*DCTTCS Trigger: TGAACAGGTGGTACAATCCCATCTTGAACAGGGTGG...CACAGAAAGGCCTAGCCTGACTAGTTCCCATGGTGTGCTCTCACAATAGGTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055549.4 ENSMUST00000062844.11 |
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| CDS-3UTR CCA 90 bp | CATGCTGGATCTGGGAGGAGATGGGGAGGTGAATACAATCAAAACACATTGTATAGGGTGGTTGTCCTCTaGGGGTGTCTTGCCCAACAG | + |
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Preference number: 4 (lower is better) Translates to: HAGSGRRWGGEYNQNTLYRVVVL*GCLAQQ Trigger: CTGTTGGGCAAGACACCCCCAGAGGACAACCACCCT...ATACAATGTGTTTTGATTGTATTCACCTCCCCATCTCCTCCCAGATCCAGCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000055549.4 ENSMUST00000062844.11 |
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| CDS-3UTR CCA 90 bp | ATGGCCATAAGCCCTGACAAGATGAACTACACGCACTGCGTGGCTTTCCTTGCACACATGAGGATGTCCTaGTGCTTGTCACTCTCAAAC | + |
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Preference number: 4 (lower is better) Translates to: MAISPDKMNYTHCVAFLAHMRMS*CLSLSN Trigger: GTTTGAGAGTGACAAGCACCAGGACATCCTCATGTG...TGCAAGGAAAGCCACGCAGTGCGTGTAGTTCATCTTGTCAGGGCTTATGGCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055549.4 ENSMUST00000062844.11 |
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| CDS-3UTR TCA 90 bp | TATTGTGAGAGCACACCATGGGAACTAGTCAGGCTAGGCCTTTCTGTGAAATGCCTCTATAGTTCCACATaGGGATGTCCTGGTGCTTGT | + |
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Preference number: 4 (lower is better) Translates to: YCESTPWELVRLGLSVKCLYSST*GCPGAC Trigger: ACAAGCACCAGGACATCCTCATGTGGAACTATAGAG...GCATTTCACAGAAAGGCCTAGCCTGACTAGTTCCCATGGTGTGCTCTCACAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055549.4 ENSMUST00000062844.11 |
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| CDS-3UTR GCA 90 bp | AAATACAATCACTTTATTTCCACTTTTTCCCAGTCCCCTGTAGCACAGGTGAGAAGTATGCCCGGGGAGTaGTGGGTGGCTTCCAGAACT | + |
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Preference number: 4 (lower is better) Translates to: KYNHFISTFSQSPVAQVRSMPGE*WVASRT Trigger: AGTTCTGGAAGCCACCCAGCACTCCCCGGGCATACT...TCTCACCTGTGCTACAGGGGACTGGGAAAAAGTGGAAATAAAGTGATTGTATTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000062844.11 |
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| CDS-3UTR CCA 90 bp | TATTGTGAGAGCACACCATGGGAACTAGTCAGGCTAGGCCTTTCTGTGAAATGCCCACCCTGTTCAAGATaGGATTGTACCACCTGTTCA | + |
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Preference number: 4 (lower is better) Translates to: YCESTPWELVRLGLSVKCPPCSR*DCTTCS Trigger: TGAACAGGTGGTACAATCCCATCTTGAACAGGGTGG...GCATTTCACAGAAAGGCCTAGCCTGACTAGTTCCCATGGTGTGCTCTCACAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055549.4 ENSMUST00000062844.11 |
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| CDS-3UTR TCA 90 bp | ATGGCCATAAGCCCTGACAAGATGAACTACACGCACTGCGTGGCTTTCCTTGCATTAGGACTTTGCAACTaGGACCAGATATCAATCATC | + |
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Preference number: 4 (lower is better) Translates to: MAISPDKMNYTHCVAFLALGLCN*DQISII Trigger: GATGATTGATATCTGGTCTCAGTTGCAAAGTCCTAA...TGCAAGGAAAGCCACGCAGTGCGTGTAGTTCATCTTGTCAGGGCTTATGGCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055549.4 ENSMUST00000062844.11 |
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| CDS-3UTR CCA 90 bp | ATGGCCATAAGCCCTGACAAGATGAACTACACGCACTGCGTGGCTTTCCTTGCAGGTGTAGAAGACTTCTaGGATGTAGTACTTCAGTTT | + |
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Preference number: 4 (lower is better) Translates to: MAISPDKMNYTHCVAFLAGVEDF*DVVLQF Trigger: AAACTGAAGTACTACATCCCAGAAGTCTTCTACACC...TGCAAGGAAAGCCACGCAGTGCGTGTAGTTCATCTTGTCAGGGCTTATGGCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055549.4 ENSMUST00000062844.11 |
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| CDS-3UTR CCA 90 bp | CATGCTGGATCTGGGAGGAGATGGGGAGGTGAATACAATCAAAACACATTGTATGCCTTTGTGCTTCTCTaGAACAAGGCCCAGTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: HAGSGRRWGGEYNQNTLYAFVLL*NKAQFL Trigger: CAGAAACTGGGCCTTGTTCCAGAGAAGCACAAAGGC...ATACAATGTGTTTTGATTGTATTCACCTCCCCATCTCCTCCCAGATCCAGCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055549.4 ENSMUST00000062844.11 |
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| CDS-3UTR TCA 90 bp | TATTGTGAGAGCACACCATGGGAACTAGTCAGGCTAGGCCTTTCTGTGAAATGCTGGCAAAATGTGGAATaGGGGACTTTATCGCCAATA | + |
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Preference number: 4 (lower is better) Translates to: YCESTPWELVRLGLSVKCWQNVE*GTLSPI Trigger: TATTGGCGATAAAGTCCCTCATTCCACATTTTGCCA...GCATTTCACAGAAAGGCCTAGCCTGACTAGTTCCCATGGTGTGCTCTCACAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055549.4 ENSMUST00000062844.11 |
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| CDS-3UTR CCA 90 bp | GAATTCCATTTCACAAAGCCACCAGGTTGTGTCCTACATATATATATATGTATGACCCCCGGCATACGGTaGGTAGACGCCGGTGTAGAA | + |
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Preference number: 4 (lower is better) Translates to: EFHFTKPPGCVLHIYICMTPGIR*VDAGVE Trigger: TTCTACACCGGCGTCTACCCACCGTATGCCGGGGGT...CATACATATATATATATGTAGGACACAACCTGGTGGCTTTGTGAAATGGAATTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055549.4 ENSMUST00000062844.11 |
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| CDS-3UTR TCA 90 bp | CATGCTGGATCTGGGAGGAGATGGGGAGGTGAATACAATCAAAACACATTGTATTGGCAAAATGTGGAATaGGGGACTTTATCGCCAATA | + |
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Preference number: 4 (lower is better) Translates to: HAGSGRRWGGEYNQNTLYWQNVE*GTLSPI Trigger: TATTGGCGATAAAGTCCCTCATTCCACATTTTGCCA...ATACAATGTGTTTTGATTGTATTCACCTCCCCATCTCCTCCCAGATCCAGCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000055549.4 ENSMUST00000062844.11 |
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| CDS-3UTR TCA 90 bp | GAATTCCATTTCACAAAGCCACCAGGTTGTGTCCTACATATATATATATGTATGCGTCATCATCGCCCTTaGAGACAAACTCTGCGTCTG | + |
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Preference number: 4 (lower is better) Translates to: EFHFTKPPGCVLHIYICMRHHRP*RQTLRL Trigger: CAGACGCAGAGTTTGTCTTCAAGGGCGATGATGACG...CATACATATATATATATGTAGGACACAACCTGGTGGCTTTGTGAAATGGAATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055549.4 ENSMUST00000062844.11 |
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| CDS-3UTR GCA 90 bp | GAATTCCATTTCACAAAGCCACCAGGTTGTGTCCTACATATATATATATGTATGGACTCCCGAATTGCTTaGCTTCTGGCAAAATGTGGA | + |
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Preference number: 4 (lower is better) Translates to: EFHFTKPPGCVLHIYICMDSRIA*LLAKCG Trigger: TCCACATTTTGCCAGAAGGCAAGCAATTCGGGAGTC...CATACATATATATATATGTAGGACACAACCTGGTGGCTTTGTGAAATGGAATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055549.4 ENSMUST00000062844.11 |
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| CDS-3UTR GCA 90 bp | GAATTCCATTTCACAAAGCCACCAGGTTGTGTCCTACATATATATATATGTATGCTTGAAGACAAACTCTaGGTCTGGACAGGAAGTGCT | + |
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Preference number: 4 (lower is better) Translates to: EFHFTKPPGCVLHIYICMLEDKL*VWTGSA Trigger: AGCACTTCCTGTCCAGACGCAGAGTTTGTCTTCAAG...CATACATATATATATATGTAGGACACAACCTGGTGGCTTTGTGAAATGGAATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055549.4 ENSMUST00000062844.11 |
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| CDS-3UTR CCA 90 bp | GAATTCCATTTCACAAAGCCACCAGGTTGTGTCCTACATATATATATATGTATGGGTGTAGAAGACTTCTaGGATGTAGTACTTCAGTTT | + |
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Preference number: 4 (lower is better) Translates to: EFHFTKPPGCVLHIYICMGVEDF*DVVLQF Trigger: AAACTGAAGTACTACATCCCAGAAGTCTTCTACACC...CATACATATATATATATGTAGGACACAACCTGGTGGCTTTGTGAAATGGAATTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055549.4 ENSMUST00000062844.11 |
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| CDS-3UTR CAA 90 bp | TATTGTGAGAGCACACCATGGGAACTAGTCAGGCTAGGCCTTTCTGTGAAATGCTCCTCTGGGGGTGTCTaGCCCAACAGGAAGACCCTC | + |
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Preference number: 5 (lower is better) Translates to: YCESTPWELVRLGLSVKCSSGGV*PNRKTL Trigger: GAGGGTCTTCCTGTTGGGCAAGACACCCCCAGAGGA...GCATTTCACAGAAAGGCCTAGCCTGACTAGTTCCCATGGTGTGCTCTCACAATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055549.4 ENSMUST00000062844.11 |
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| CDS-3UTR CAA 90 bp | ATGGCCATAAGCCCTGACAAGATGAACTACACGCACTGCGTGGCTTTCCTTGCATCAGGTGACTTGTGTTaGGAGATGTGGCTAGCTCCC | + |
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Preference number: 5 (lower is better) Translates to: MAISPDKMNYTHCVAFLASGDLC*EMWLAP Trigger: GGGAGCTAGCCACATCTCCAAACACAAGTCACCTGA...TGCAAGGAAAGCCACGCAGTGCGTGTAGTTCATCTTGTCAGGGCTTATGGCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055549.4 ENSMUST00000062844.11 |
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| CDS-3UTR CAA 90 bp | ACCGGCAGCCAGAGGAAGGGTCATAACCACTCACCCTGCCATGCTGAGCTGTCTCCTATGAACAAGTCTTaGGCTTTGCTCTTGGATAAG | + |
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Preference number: 5 (lower is better) Translates to: TGSQRKGHNHSPCHAELSPMNKS*ALLLDK Trigger: CTTATCCAAGAGCAAAGCCAAAGACTTGTTCATAGG...AGACAGCTCAGCATGGCAGGGTGAGTGGTTATGACCCTTCCTCTGGCTGCCGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055549.4 ENSMUST00000062844.11 |
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| CDS-3UTR CAA 90 bp | TATTGTGAGAGCACACCATGGGAACTAGTCAGGCTAGGCCTTTCTGTGAAATGCTCAGGTGACTTGTGTTaGGAGATGTGGCTAGCTCCC | + |
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Preference number: 5 (lower is better) Translates to: YCESTPWELVRLGLSVKCSGDLC*EMWLAP Trigger: GGGAGCTAGCCACATCTCCAAACACAAGTCACCTGA...GCATTTCACAGAAAGGCCTAGCCTGACTAGTTCCCATGGTGTGCTCTCACAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055549.4 ENSMUST00000062844.11 |
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| CDS-3UTR CAA 90 bp | TGGCTGTCGGGCTACTCAGTCTCCAGTTGGCCATTAGGGAATCACACTCATGATAGGATGTCCTGGTGCTaGTCACTCTCAAACTTAAGC | + |
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Preference number: 5 (lower is better) Translates to: WLSGYSVSSWPLGNHTHDRMSWC*SLSNLS Trigger: GCTTAAGTTTGAGAGTGACAAGCACCAGGACATCCT...ATCATGAGTGTGATTCCCTAATGGCCAACTGGAGACTGAGTAGCCCGACAGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055549.4 ENSMUST00000062844.11 |
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| CDS-3UTR CAA 90 bp | ATGGCCATAAGCCCTGACAAGATGAACTACACGCACTGCGTGGCTTTCCTTGCAAGGATGTCCTGGTGCTaGTCACTCTCAAACTTAAGC | + |
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Preference number: 5 (lower is better) Translates to: MAISPDKMNYTHCVAFLARMSWC*SLSNLS Trigger: GCTTAAGTTTGAGAGTGACAAGCACCAGGACATCCT...TGCAAGGAAAGCCACGCAGTGCGTGTAGTTCATCTTGTCAGGGCTTATGGCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055549.4 ENSMUST00000062844.11 |
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| CDS-3UTR CAA 90 bp | TGGCTGTCGGGCTACTCAGTCTCCAGTTGGCCATTAGGGAATCACACTCATGATAATAGCTCAGGTGACTaGTGTTTGGAGATGTGGCTA | + |
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Preference number: 5 (lower is better) Translates to: WLSGYSVSSWPLGNHTHDNSSGD*CLEMWL Trigger: TAGCCACATCTCCAAACACAAGTCACCTGAGCTATT...ATCATGAGTGTGATTCCCTAATGGCCAACTGGAGACTGAGTAGCCCGACAGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055549.4 ENSMUST00000062844.11 |
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| CDS-3UTR CAA 90 bp | TGGCTGTCGGGCTACTCAGTCTCCAGTTGGCCATTAGGGAATCACACTCATGATGTAAGAAGGGCTTCTTaGCACATTTCTTCGGTTGAT | + |
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Preference number: 5 (lower is better) Translates to: WLSGYSVSSWPLGNHTHDVRRAS*HISSVD Trigger: ATCAACCGAAGAAATGTGCAAAGAAGCCCTTCTTAC...ATCATGAGTGTGATTCCCTAATGGCCAACTGGAGACTGAGTAGCCCGACAGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055549.4 ENSMUST00000062844.11 |
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| CDS-3UTR CAA 90 bp | ATGGCCATAAGCCCTGACAAGATGAACTACACGCACTGCGTGGCTTTCCTTGCACTTTCCATTTTTGTCTaGGCTACTGTTTTTGGAGAC | + |
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Preference number: 5 (lower is better) Translates to: MAISPDKMNYTHCVAFLALSIFV*ATVFGD Trigger: GTCTCCAAAAACAGTAGCCAAGACAAAAATGGAAAG...TGCAAGGAAAGCCACGCAGTGCGTGTAGTTCATCTTGTCAGGGCTTATGGCCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000055549.4 ENSMUST00000062844.11 |
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| CDS-3UTR CAA 90 bp | AAATACAATCACTTTATTTCCACTTTTTCCCAGTCCCCTGTAGCACAGGTGAGACTTTCCATTTTTGTCTaGGCTACTGTTTTTGGAGAC | + |
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Preference number: 5 (lower is better) Translates to: KYNHFISTFSQSPVAQVRLSIFV*ATVFGD Trigger: GTCTCCAAAAACAGTAGCCAAGACAAAAATGGAAAG...TCTCACCTGTGCTACAGGGGACTGGGAAAAAGTGGAAATAAAGTGATTGTATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000062844.11 |
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| CDS-3UTR CAA 90 bp | GAATTCCATTTCACAAAGCCACCAGGTTGTGTCCTACATATATATATATGTATGGTAAGAAGGGCTTCTTaGCACATTTCTTCGGTTGAT | + |
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Preference number: 5 (lower is better) Translates to: EFHFTKPPGCVLHIYICMVRRAS*HISSVD Trigger: ATCAACCGAAGAAATGTGCAAAGAAGCCCTTCTTAC...CATACATATATATATATGTAGGACACAACCTGGTGGCTTTGTGAAATGGAATTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055549.4 ENSMUST00000062844.11 |
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