Pregenerated sensors for B3GLCT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051950Ensembl transcript IDs: ENSMUST00000100404.6
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGATCAATCAGGACACGCAGTGAACACTGGCATCTAACACGGCCCTaGGTAGCATTGTTTGTAACTCTGGCTGCTGAGCGATTACGGTCC | + |
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Preference number: 1 (lower is better) Translates to: RSIRTRSEHWHLTRP*VALFVTLAAERLRS Trigger: GGACCGTAATCGCTCAGCAGCCAGAGTTACAAACAATGCTACGCAGGGCCGTGTTAGATGCCAGTGTTCACTGCGTGTCCTGATTGATCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| 3UTR CCA 90 bp | GAAACTTCCTCTGTTCTCTGGTTGGTAACATTTCAGGAGCAGAGATaGGAGGGGTGGACTGAGGAATTCCCTGAGCGGCACTGGTGTAGC | + |
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Preference number: 1 (lower is better) Translates to: ETSSVLWLVTFQEQR*EGWTEEFPERHWCS Trigger: GCTACACCAGTGCCGCTCAGGGAATTCCTCAGTCCACCCCTCCCATCTCTGCTCCTGAAATGTTACCAACCAGAGAACAGAGGAAGTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| 3UTR GCA 90 bp | GGTGGCATTCATCATTGCCGTGTCAGCAATGATGCTACAGCCATCTaGAGGACACCCAGAAGCCATTATGGTCCCTTTCATGCACTTGAC | + |
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Preference number: 1 (lower is better) Translates to: GGIHHCRVSNDATAI*RTPRSHYGPFHALD Trigger: GTCAAGTGCATGAAAGGGACCATAATGGCTTCTGGGTGTCCTGCAGATGGCTGTAGCATCATTGCTGACACGGCAATGATGAATGCCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| 3UTR CCA 90 bp | GATGCGCTAGCTTTTGTCCTACCAAATGAAACTTCCTCTGTTCTCTaGTTGGTAACATTTCAGGAGCAGAGATGGGAGGGGTGGACTGAG | + |
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Preference number: 1 (lower is better) Translates to: DALAFVLPNETSSVL*LVTFQEQRWEGWTE Trigger: CTCAGTCCACCCCTCCCATCTCTGCTCCTGAAATGTTACCAACCAGAGAACAGAGGAAGTTTCATTTGGTAGGACAAAAGCTAGCGCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| 3UTR TCA 90 bp | CATCTGCAGGACACCCAGAAGCCATTATGGTCCCTTTCATGCACTTaGCTGTCCTCAGTTCAGTTTCTAGCTGAACCACAGAATCAGTTT | + |
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Preference number: 1 (lower is better) Translates to: HLQDTQKPLWSLSCT*LSSVQFLAEPQNQF Trigger: AAACTGATTCTGTGGTTCAGCTAGAAACTGAACTGAGGACAGTCAAGTGCATGAAAGGGACCATAATGGCTTCTGGGTGTCCTGCAGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| 3UTR TCA 90 bp | GCATCTAACACGGCCCTGCGTAGCATTGTTTGTAACTCTGGCTGCTaGGCGATTACGGTCCCAAGCATTCAACAAAGGTTATTTTTGTGT | + |
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Preference number: 1 (lower is better) Translates to: ASNTALRSIVCNSGC*AITVPSIQQRLFLC Trigger: ACACAAAAATAACCTTTGTTGAATGCTTGGGACCGTAATCGCTCAGCAGCCAGAGTTACAAACAATGCTACGCAGGGCCGTGTTAGATGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| 3UTR CCA 90 bp | CTTATGAGTCTACCGATACAGAAAATATCCTATTTCCACAAGGACTaGGAAGTGTCCATTTCACACAGCATACACGAGCAGCTGGACCAC | + |
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Preference number: 1 (lower is better) Translates to: LMSLPIQKISYFHKD*EVSISHSIHEQLDH Trigger: GTGGTCCAGCTGCTCGTGTATGCTGTGTGAAATGGACACTTCCCAGTCCTTGTGGAAATAGGATATTTTCTGTATCGGTAGACTCATAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| 3UTR CCA 90 bp | CAACTGCCACTCCTAGGGGGTCTCGACCCACAGGTTGAGAACCATTaGTTTAAAGGCTCATTCCTTTGGCAATATCCATGTTTAAAGATT | + |
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Preference number: 1 (lower is better) Translates to: QLPLLGGLDPQVENH*FKGSFLWQYPCLKI Trigger: AATCTTTAAACATGGATATTGCCAAAGGAATGAGCCTTTAAACCAATGGTTCTCAACCTGTGGGTCGAGACCCCCTAGGAGTGGCAGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| 3UTR GCA 90 bp | GGTGAATCTCTGAGGTTCTCTATACACATCAATAACCATGATAGATaGAACGTACTAAATGTCGTCGATCAATCAGGACACGCAGTGAAC | + |
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Preference number: 1 (lower is better) Translates to: GESLRFSIHINNHDR*NVLNVVDQSGHAVN Trigger: GTTCACTGCGTGTCCTGATTGATCGACGACATTTAGTACGTTGCATCTATCATGGTTATTGATGTGTATAGAGAACCTCAGAGATTCACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| 3UTR TCA 90 bp | TTGAGTTTTAGGTTTTACCAATCAGCCTCAGTATTTCATTCCTACTaGGTGCCTGGGAACCAATTTCCATCAACAATAGAGCCATTTAAA | + |
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Preference number: 1 (lower is better) Translates to: LSFRFYQSASVFHSY*VPGNQFPSTIEPFK Trigger: TTTAAATGGCTCTATTGTTGATGGAAATTGGTTCCCAGGCACTCAGTAGGAATGAAATACTGAGGCTGATTGGTAAAACCTAAAACTCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| 3UTR-3UTR CCA 90 bp | TGTCGTCGATCAATCAGGACACGCAGTGAACACTGGCATCTAACACGGCCCTGCGGGCTTTGGGGAGGCTaGCAGGGAGCAGAGCCTTCA | + |
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Preference number: 2 (lower is better) Translates to: CRRSIRTRSEHWHLTRPCGLWGG*QGAEPS Trigger: TGAAGGCTCTGCTCCCTGCCAGCCTCCCCAAAGCCC...GCAGGGCCGTGTTAGATGCCAGTGTTCACTGCGTGTCCTGATTGATCGACGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| 3UTR CAA 90 bp | TGTCAACCTAGCATCCTAATTTCCGGTGACACTCTGTCCACTCTATaGGGGGCGGAGGGCTTTGGGGAGGCTGGCAGGGAGCAGAGCCTT | + |
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Preference number: 2 (lower is better) Translates to: CQPSILISGDTLSTL*GAEGFGEAGREQSL Trigger: AAGGCTCTGCTCCCTGCCAGCCTCCCCAAAGCCCTCCGCCCCCAATAGAGTGGACAGAGTGTCACCGGAAATTAGGATGCTAGGTTGACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| 3UTR CAA 90 bp | AGGACACGCAGTGAACACTGGCATCTAACACGGCCCTGCGTAGCATaGTTTGTAACTCTGGCTGCTGAGCGATTACGGTCCCAAGCATTC | + |
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Preference number: 2 (lower is better) Translates to: RTRSEHWHLTRPCVA*FVTLAAERLRSQAF Trigger: GAATGCTTGGGACCGTAATCGCTCAGCAGCCAGAGTTACAAACAATGCTACGCAGGGCCGTGTTAGATGCCAGTGTTCACTGCGTGTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| 3UTR-3UTR CCA 90 bp | TGTCGTCGATCAATCAGGACACGCAGTGAACACTGGCATCTAACACGGCCCTGCACCTTCCTTAGGCAGTaGTCCTTTAATACAGTAGTT | + |
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Preference number: 2 (lower is better) Translates to: CRRSIRTRSEHWHLTRPCTFLRQ*SFNTVV Trigger: AACTACTGTATTAAAGGACCACTGCCTAAGGAAGGT...GCAGGGCCGTGTTAGATGCCAGTGTTCACTGCGTGTCCTGATTGATCGACGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| 3UTR-3UTR TCA 90 bp | CAGGCAGGCGATGTGCTGGGTCATGAGAAATGGCTTAAAAGTAAAAATGACCTAGGGAGGGATGTGCCCTaGAGAATCCAGGCTCAAAAT | + |
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Preference number: 2 (lower is better) Translates to: QAGDVLGHEKWLKSKNDLGRDVP*RIQAQN Trigger: ATTTTGAGCCTGGATTCTTCAGGGCACATCCCTCCC...TAGGTCATTTTTACTTTTAAGCCATTTCTCATGACCCAGCACATCGCCTGCCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| 3UTR-3UTR CCA 90 bp | CCATCTGCAGGACACCCAGAAGCCATTATGGTCCCTTTCATGCACTTGACTGTCGCCACACACCAATCCTaGTGCTTATTAATTTGGGAA | + |
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Preference number: 2 (lower is better) Translates to: PSAGHPEAIMVPFMHLTVATHQS*CLLIWE Trigger: TTCCCAAATTAATAAGCACCAGGATTGGTGTGTGGC...GACAGTCAAGTGCATGAAAGGGACCATAATGGCTTCTGGGTGTCCTGCAGATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| 3UTR-3UTR TCA 90 bp | TTTTATTCTATAGAAAGGAGGAGAACACATTTTGCAGGTGACTTGTTTAGAGGGCCCCACGCCCACTGCTaGCACAGAAGAGACCTGTCA | + |
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Preference number: 2 (lower is better) Translates to: FYSIERRRTHFAGDLFRGPHAHC*HRRDLS Trigger: TGACAGGTCTCTTCTGTGTCAGCAGTGGGCGTGGGG...CCCTCTAAACAAGTCACCTGCAAAATGTGTTCTCCTCCTTTCTATAGAATAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| 3UTR-3UTR CCA 90 bp | CTACAGCCATCTGCAGGACACCCAGAAGCCATTATGGTCCCTTTCATGCACTTGCAGGTTGAGAACCATTaGTTTAAAGGCTCATTCCTT | + |
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Preference number: 2 (lower is better) Translates to: LQPSAGHPEAIMVPFMHLQVENH*FKGSFL Trigger: AAGGAATGAGCCTTTAAACCAATGGTTCTCAACCTG...CAAGTGCATGAAAGGGACCATAATGGCTTCTGGGTGTCCTGCAGATGGCTGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| 3UTR-3UTR CCA 90 bp | CCATCTGCAGGACACCCAGAAGCCATTATGGTCCCTTTCATGCACTTGACTGTCAATAAAAGGTGTCACTaGAAAACGAGGGTTGCTTTA | + |
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Preference number: 2 (lower is better) Translates to: PSAGHPEAIMVPFMHLTVNKRCH*KTRVAL Trigger: TAAAGCAACCCTCGTTTTCCAGTGACACCTTTTATT...GACAGTCAAGTGCATGAAAGGGACCATAATGGCTTCTGGGTGTCCTGCAGATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| 3UTR-3UTR GCA 90 bp | TTTTATTCTATAGAAAGGAGGAGAACACATTTTGCAGGTGACTTGTTTAGAGGGCAGGCCAGCTCCAGATaGAGCTCACATTACCAGACC | + |
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Preference number: 2 (lower is better) Translates to: FYSIERRRTHFAGDLFRGQASSR*SSHYQT Trigger: GGTCTGGTAATGTGAGCTGCATCTGGAGCTGGCCTG...CCCTCTAAACAAGTCACCTGCAAAATGTGTTCTCCTCCTTTCTATAGAATAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| 3UTR-3UTR CCA 90 bp | CAGGCAGGCGATGTGCTGGGTCATGAGAAATGGCTTAAAAGTAAAAATGACCTAAGCCATTTAAAGCCATaGTTCTCAACCTTCCTTAGG | + |
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Preference number: 2 (lower is better) Translates to: QAGDVLGHEKWLKSKNDLSHLKP*FSTFLR Trigger: CCTAAGGAAGGTTGAGAACCATGGCTTTAAATGGCT...TAGGTCATTTTTACTTTTAAGCCATTTCTCATGACCCAGCACATCGCCTGCCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| 3UTR-3UTR TCA 90 bp | TTTTATTCTATAGAAAGGAGGAGAACACATTTTGCAGGTGACTTGTTTAGAGGGAATCAGGACACGCAGTaGACACTGGCATCTAACACG | + |
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Preference number: 2 (lower is better) Translates to: FYSIERRRTHFAGDLFRGNQDTQ*TLASNT Trigger: CGTGTTAGATGCCAGTGTTCACTGCGTGTCCTGATT...CCCTCTAAACAAGTCACCTGCAAAATGTGTTCTCCTCCTTTCTATAGAATAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| 3UTR CAA 90 bp | AAGGACTTTAGGTACCATTTATTTCCTCTGACAGTCAAAAAGCTCTaGATTTACAGCCCACGGTGGGCTAAAATAGGCACAATAATTGCC | + |
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Preference number: 2 (lower is better) Translates to: KDFRYHLFPLTVKKL*IYSPRWAKIGTIIA Trigger: GGCAATTATTGTGCCTATTTTAGCCCACCGTGGGCTGTAAATCAAGAGCTTTTTGACTGTCAGAGGAAATAAATGGTACCTAAAGTCCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| 3UTR-3UTR GCA 90 bp | TTTTATTCTATAGAAAGGAGGAGAACACATTTTGCAGGTGACTTGTTTAGAGGGGGTGGCATTCATCATTaGCGTGTCAGCAATGATGCT | + |
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Preference number: 2 (lower is better) Translates to: FYSIERRRTHFAGDLFRGGGIHH*RVSNDA Trigger: AGCATCATTGCTGACACGGCAATGATGAATGCCACC...CCCTCTAAACAAGTCACCTGCAAAATGTGTTCTCCTCCTTTCTATAGAATAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| 3UTR-3UTR CCA 90 bp | TTTTTCTTCCACAAAAATGACACATCTACGAAGGAACGGGAGGCACCACAAATATATTTCCACAAGGACTaGGAAGTGTCCATTTCACAC | + |
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Preference number: 2 (lower is better) Translates to: FFFHKNDTSTKEREAPQIYFHKD*EVSISH Trigger: GTGTGAAATGGACACTTCCCAGTCCTTGTGGAAATA...TATTTGTGGTGCCTCCCGTTCCTTCGTAGATGTGTCATTTTTGTGGAAGAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| 3UTR-3UTR TCA 90 bp | TTTTTCTTCCACAAAAATGACACATCTACGAAGGAACGGGAGGCACCACAAATAACAACCTTAGGAACTTaGGAGCAAATCATGTGCAAA | + |
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Preference number: 2 (lower is better) Translates to: FFFHKNDTSTKEREAPQITTLGT*EQIMCK Trigger: TTTGCACATGATTTGCTCTCAAGTTCCTAAGGTTGT...TATTTGTGGTGCCTCCCGTTCCTTCGTAGATGTGTCATTTTTGTGGAAGAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| 3UTR-3UTR CCA 90 bp | TTTTATTCTATAGAAAGGAGGAGAACACATTTTGCAGGTGACTTGTTTAGAGGGTTCCTACTGAGTGCCTaGGAACCAATTTCCATCAAC | + |
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Preference number: 2 (lower is better) Translates to: FYSIERRRTHFAGDLFRGFLLSA*EPISIN Trigger: GTTGATGGAAATTGGTTCCCAGGCACTCAGTAGGAA...CCCTCTAAACAAGTCACCTGCAAAATGTGTTCTCCTCCTTTCTATAGAATAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| 3UTR CAA 90 bp | AAGATTCAATGTTTATGTGGGATGATAGCCAGTCATATTCTTGTATaGGCGTCCCTGTTACAATGGAGAAAACAGAAAAGGACTTTAGGT | + |
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Preference number: 2 (lower is better) Translates to: KIQCLCGMIASHILV*ASLLQWRKQKRTLG Trigger: ACCTAAAGTCCTTTTCTGTTTTCTCCATTGTAACAGGGACGCCAATACAAGAATATGACTGGCTATCATCCCACATAAACATTGAATCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| 3UTR TCA 72 bp | AGGCTGGCAGGGAGCAGAGCCTTCACCAGATGGCCTTaGGTCTGTTTTGGGGGTGCAACCAGCAGAATAGGG | + |
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Preference number: 3 (lower is better) Translates to: RLAGSRAFTRWP*VCFGGATSRIG Trigger: CCCTATTCTGCTGGTTGCACCCCCAAAACAGACTCAAGGCCATCTGGTGAAGGCTCTGCTCCCTGCCAGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| 3UTR-3UTR CAA 90 bp | GGGCTTTGGGGAGGCTGGCAGGGAGCAGAGCCTTCACCAGATGGCCTTGAGTCTACAGTCAAAAAGCTCTaGATTTACAGCCCACGGTGG | + |
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Preference number: 3 (lower is better) Translates to: GLWGGWQGAEPSPDGLESTVKKL*IYSPRW Trigger: CCACCGTGGGCTGTAAATCAAGAGCTTTTTGACTGT...AGACTCAAGGCCATCTGGTGAAGGCTCTGCTCCCTGCCAGCCTCCCCAAAGCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| 3UTR GCA 72 bp | AGGACACGCAGTGAACACTGGCATCTAACACGGCCCTaGGTAGCATTGTTTGTAACTCTGGCTGCTGAGCGA | + |
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Preference number: 3 (lower is better) Translates to: RTRSEHWHLTRP*VALFVTLAAER Trigger: TCGCTCAGCAGCCAGAGTTACAAACAATGCTACGCAGGGCCGTGTTAGATGCCAGTGTTCACTGCGTGTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| 3UTR-3UTR CAA 90 bp | CTACAGCCATCTGCAGGACACCCAGAAGCCATTATGGTCCCTTTCATGCACTTGGGCCTTGAGTCTGTTTaGGGGGTGCAACCAGCAGAA | + |
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Preference number: 3 (lower is better) Translates to: LQPSAGHPEAIMVPFMHLGLESV*GVQPAE Trigger: TTCTGCTGGTTGCACCCCCAAAACAGACTCAAGGCC...CAAGTGCATGAAAGGGACCATAATGGCTTCTGGGTGTCCTGCAGATGGCTGTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| 3UTR TCA 72 bp | GACACCCAGAAGCCATTATGGTCCCTTTCATGCACTTaGCTGTCCTCAGTTCAGTTTCTAGCTGAACCACAG | + |
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Preference number: 3 (lower is better) Translates to: DTQKPLWSLSCT*LSSVQFLAEPQ Trigger: CTGTGGTTCAGCTAGAAACTGAACTGAGGACAGTCAAGTGCATGAAAGGGACCATAATGGCTTCTGGGTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| 3UTR GCA 72 bp | CATGATAGCAATGGTCACAATGGTGGCATTCATCATTaGCGTGTCAGCAATGATGCTACAGCCATCTGCAGG | + |
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Preference number: 3 (lower is better) Translates to: HDSNGHNGGIHH*RVSNDATAICR Trigger: CCTGCAGATGGCTGTAGCATCATTGCTGACACGGCAATGATGAATGCCACCATTGTGACCATTGCTATCATG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| 3UTR CCA 72 bp | CTCCTAGGGGGTCTCGACCCACAGGTTGAGAACCATTaGTTTAAAGGCTCATTCCTTTGGCAATATCCATGT | + |
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Preference number: 3 (lower is better) Translates to: LLGGLDPQVENH*FKGSFLWQYPC Trigger: ACATGGATATTGCCAAAGGAATGAGCCTTTAAACCAATGGTTCTCAACCTGTGGGTCGAGACCCCCTAGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| 3UTR CCA 72 bp | AAATGTCGTCGATCAATCAGGACACGCAGTGAACACTaGCATCTAACACGGCCCTGCGTAGCATTGTTTGTA | + |
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Preference number: 3 (lower is better) Translates to: KCRRSIRTRSEH*HLTRPCVALFV Trigger: TACAAACAATGCTACGCAGGGCCGTGTTAGATGCCAGTGTTCACTGCGTGTCCTGATTGATCGACGACATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| 3UTR-3UTR CAA 90 bp | AATAAAAGGTGTCACTGGAAAACGAGGGTTGCTTTAAAGCATGTTGTTCAGATTACTCTGTCCACTCTATaGGGGGCGGAGGGCTTTGGG | + |
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Preference number: 3 (lower is better) Translates to: NKRCHWKTRVALKHVVQITLSTL*GAEGFG Trigger: CCCAAAGCCCTCCGCCCCCAATAGAGTGGACAGAGT...AATCTGAACAACATGCTTTAAAGCAACCCTCGTTTTCCAGTGACACCTTTTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| 3UTR CCA 72 bp | CTACCGATACAGAAAATATCCTATTTCCACAAGGACTaGGAAGTGTCCATTTCACACAGCATACACGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: LPIQKISYFHKD*EVSISHSIHEQ Trigger: CTGCTCGTGTATGCTGTGTGAAATGGACACTTCCCAGTCCTTGTGGAAATAGGATATTTTCTGTATCGGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| 3UTR TCA 72 bp | AGGTTTTACCAATCAGCCTCAGTATTTCATTCCTACTaGGTGCCTGGGAACCAATTTCCATCAACAATAGAG | + |
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Preference number: 3 (lower is better) Translates to: RFYQSASVFHSY*VPGNQFPSTIE Trigger: CTCTATTGTTGATGGAAATTGGTTCCCAGGCACTCAGTAGGAATGAAATACTGAGGCTGATTGGTAAAACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| 3UTR TCA 72 bp | TCATTCCTCAGATGCGCTAGCTTTTGTCCTACCAAATaGAACTTCCTCTGTTCTCTGGTTGGTAACATTTCA | + |
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Preference number: 3 (lower is better) Translates to: SFLRCASFCPTK*NFLCSLVGNIS Trigger: TGAAATGTTACCAACCAGAGAACAGAGGAAGTTTCATTTGGTAGGACAAAAGCTAGCGCATCTGAGGAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| 3UTR GCA 72 bp | CTGAGGTTCTCTATACACATCAATAACCATGATAGATaGAACGTACTAAATGTCGTCGATCAATCAGGACAC | + |
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Preference number: 3 (lower is better) Translates to: LRFSIHINNHDR*NVLNVVDQSGH Trigger: GTGTCCTGATTGATCGACGACATTTAGTACGTTGCATCTATCATGGTTATTGATGTGTATAGAGAACCTCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| 3UTR CCA 72 bp | ATTCTACAGGCAGGCGATGTGCTGGGTCATGAGAAATaGCTTAAAAGTAAAAATGACCTATCAGGTAATTCT | + |
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Preference number: 3 (lower is better) Translates to: ILQAGDVLGHEK*LKSKNDLSGNS Trigger: AGAATTACCTGATAGGTCATTTTTACTTTTAAGCCATTTCTCATGACCCAGCACATCGCCTGCCTGTAGAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| 3UTR TCA 72 bp | GGCACAATAATTGCCGTGTTACAATTACGACATCTATaGAAACAAGCGATTTTTCCCAGTTTCCCTTATGAG | + |
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Preference number: 3 (lower is better) Translates to: GTIIAVLQLRHL*KQAIFPSFPYE Trigger: CTCATAAGGGAAACTGGGAAAAATCGCTTGTTTTCATAGATGTCGTAATTGTAACACGGCAATTATTGTGCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| 3UTR GCA 72 bp | AAGATATCAATTCTCAGTTGGTGTTCAAATAGAGCCTaGCATTTGCTATGTATAAAACATAACACGTGGTTC | + |
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Preference number: 3 (lower is better) Translates to: KISILSWCSNRA*HLLCIKHNTWF Trigger: GAACCACGTGTTATGTTTTATACATAGCAAATGGCAGGCTCTATTTGAACACCAACTGAGAATTGATATCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| 3UTR CAA 72 bp | GAGGCTGGCAGGGAGCAGAGCCTTCACCAGATGGCCTaGAGTCTGTTTTGGGGGTGCAACCAGCAGAATAGG | + |
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Preference number: 4 (lower is better) Translates to: EAGREQSLHQMA*SLFWGCNQQNR Trigger: CCTATTCTGCTGGTTGCACCCCCAAAACAGACTCAAGGCCATCTGGTGAAGGCTCTGCTCCCTGCCAGCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| CDS-3UTR TCA 90 bp | TGGGGAGGCTGGCAGGGAGCAGAGCCTTCACCAGATGGCCTTGAGTCTGTTTTGTCCTGCTTTGCCAACTaGTGGAGAAGGAGGACTCTA | + |
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Preference number: 4 (lower is better) Translates to: WGGWQGAEPSPDGLESVLSCFAN*WRRRTL Trigger: TAGAGTCCTCCTTCTCCATCAGTTGGCAAAGCAGGA...CAAAACAGACTCAAGGCCATCTGGTGAAGGCTCTGCTCCCTGCCAGCCTCCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| CDS-3UTR GCA 90 bp | TGGGGAGGCTGGCAGGGAGCAGAGCCTTCACCAGATGGCCTTGAGTCTGTTTTGCATTGCTGTAGCATCTaGAGCTGCTCACGAGAAGTC | + |
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Preference number: 4 (lower is better) Translates to: WGGWQGAEPSPDGLESVLHCCSI*SCSREV Trigger: GACTTCTCGTGAGCAGCTGCAGATGCTACAGCAATG...CAAAACAGACTCAAGGCCATCTGGTGAAGGCTCTGCTCCCTGCCAGCCTCCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| CDS-3UTR CCA 90 bp | CCATCTGCAGGACACCCAGAAGCCATTATGGTCCCTTTCATGCACTTGACTGTCAGCGGTAGGAAAGAATaGAACGTGGTGACGCAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: PSAGHPEAIMVPFMHLTVSGRKE*NVVTQR Trigger: CCGCTGCGTCACCACGTTCCATTCTTTCCTACCGCT...GACAGTCAAGTGCATGAAAGGGACCATAATGGCTTCTGGGTGTCCTGCAGATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
||
| 3UTR CAA 72 bp | AGTGAACACTGGCATCTAACACGGCCCTGCGTAGCATaGTTTGTAACTCTGGCTGCTGAGCGATTACGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SEHWHLTRPCVA*FVTLAAERLRS Trigger: GGACCGTAATCGCTCAGCAGCCAGAGTTACAAACAATGCTACGCAGGGCCGTGTTAGATGCCAGTGTTCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
||
| CDS-3UTR CCA 90 bp | GGGCTTTGGGGAGGCTGGCAGGGAGCAGAGCCTTCACCAGATGGCCTTGAGTCTATATTTAAAGACTGTTaGGTTCTCAGAGAAGGCGTA | + |
|
Preference number: 4 (lower is better) Translates to: GLWGGWQGAEPSPDGLESIFKDC*VLREGV Trigger: TACGCCTTCTCTGAGAACCCAACAGTCTTTAAATAT...AGACTCAAGGCCATCTGGTGAAGGCTCTGCTCCCTGCCAGCCTCCCCAAAGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
||
| CDS-3UTR TCA 90 bp | TGGGGAGGCTGGCAGGGAGCAGAGCCTTCACCAGATGGCCTTGAGTCTGTTTTGAATCCTGAGAAGGCGTaGCCTTTTCTTTTATCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: WGGWQGAEPSPDGLESVLNPEKA*PFLLSL Trigger: AAGAGATAAAAGAAAAGGTCACGCCTTCTCAGGATT...CAAAACAGACTCAAGGCCATCTGGTGAAGGCTCTGCTCCCTGCCAGCCTCCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| CDS-3UTR TCA 90 bp | CAGGCAGGCGATGTGCTGGGTCATGAGAAATGGCTTAAAAGTAAAAATGACCTATCTACTGGCCGAGCCTaGTGGAAGAGGGGGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QAGDVLGHEKWLKSKNDLSTGRA*WKRGLC Trigger: ACACAGCCCCCTCTTCCATCAGGCTCGGCCAGTAGA...TAGGTCATTTTTACTTTTAAGCCATTTCTCATGACCCAGCACATCGCCTGCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
||
| CDS-3UTR CCA 90 bp | CAGGCAGGCGATGTGCTGGGTCATGAGAAATGGCTTAAAAGTAAAAATGACCTAGTCTCCTGCGTGGCTTaGTCTTCCTCACTGGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: QAGDVLGHEKWLKSKNDLVSCVA*SSSLGA Trigger: GGCACCCAGTGAGGAAGACCAAGCCACGCAGGAGAC...TAGGTCATTTTTACTTTTAAGCCATTTCTCATGACCCAGCACATCGCCTGCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
||
| CDS-3UTR TCA 90 bp | TTTTATTCTATAGAAAGGAGGAGAACACATTTTGCAGGTGACTTGTTTAGAGGGGGACCCCCAGCCCACTaGAGCACATGCCCAGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: FYSIERRRTHFAGDLFRGGPPAH*STCPEP Trigger: TGGTTCTGGGCATGTGCTTCAGTGGGCTGGGGGTCC...CCCTCTAAACAAGTCACCTGCAAAATGTGTTCTCCTCCTTTCTATAGAATAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
||
| CDS-3UTR CCA 90 bp | TTAAAGCCATGGTTCTCAACCTTCCTTAGGCAGTGGTCCTTTAATACAGTAGTTGGGCGAGGTAGTCCTTaGGGTAATCTACTGGCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: LKPWFSTFLRQWSFNTVVGRGSP*GNLLAE Trigger: CTCGGCCAGTAGATTACCCCAAGGACTACCTCGCCC...AACTACTGTATTAAAGGACCACTGCCTAAGGAAGGTTGAGAACCATGGCTTTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
||
| CDS-3UTR TCA 90 bp | CCATCTGCAGGACACCCAGAAGCCATTATGGTCCCTTTCATGCACTTGACTGTCGAAGAAAATCCACGCTaGATTCTTGCTGTATGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: PSAGHPEAIMVPFMHLTVEENPR*ILAVCY Trigger: GTAACATACAGCAAGAATTCAGCGTGGATTTTCTTC...GACAGTCAAGTGCATGAAAGGGACCATAATGGCTTCTGGGTGTCCTGCAGATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
||
| CDS-3UTR GCA 90 bp | CAGGCAGGCGATGTGCTGGGTCATGAGAAATGGCTTAAAAGTAAAAATGACCTAGATAAGGCTAGCCTGTaGCGCCCATGTCTTCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: QAGDVLGHEKWLKSKNDLDKASL*RPCLLY Trigger: GTAAAGAAGACATGGGCGGCACAGGCTAGCCTTATC...TAGGTCATTTTTACTTTTAAGCCATTTCTCATGACCCAGCACATCGCCTGCCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
||
| CDS-3UTR GCA 90 bp | AATAAAAGGTGTCACTGGAAAACGAGGGTTGCTTTAAAGCATGTTGTTCAGATTAGCTGTAGCCGCCTGTaGCTAGGCCGTAGCCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: NKRCHWKTRVALKHVVQISCSRL*LGRSHS Trigger: GCTATGGCTACGGCCTAGGCACAGGCGGCTACAGCT...AATCTGAACAACATGCTTTAAAGCAACCCTCGTTTTCCAGTGACACCTTTTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
||
| 3UTR CAA 72 bp | TTTGTCCTACCAAATGAAACTTCCTCTGTTCTCTGGTaGGTAACATTTCAGGAGCAGAGATGGGAGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FVLPNETSSVLW*VTFQEQRWEGW Trigger: CCACCCCTCCCATCTCTGCTCCTGAAATGTTACCAACCAGAGAACAGAGGAAGTTTCATTTGGTAGGACAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
||
| CDS-3UTR CCA 90 bp | TTTTTCTTCCACAAAAATGACACATCTACGAAGGAACGGGAGGCACCACAAATATTCCCAAATCCACCGTaGGGATGGCGGTTTCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: FFFHKNDTSTKEREAPQIFPNPP*GWRFLH Trigger: ATGCAGAAACCGCCATCCCCACGGTGGATTTGGGAA...TATTTGTGGTGCCTCCCGTTCCTTCGTAGATGTGTCATTTTTGTGGAAGAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
||
| CDS-3UTR TCA 90 bp | TTTTTCTTCCACAAAAATGACACATCTACGAAGGAACGGGAGGCACCACAAATAGGAGCCTGGAGATGCTaGTTAATGTGTCATCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FFFHKNDTSTKEREAPQIGAWRC*LMCHRP Trigger: TGGACGATGACACATTAATCAGCATCTCCAGGCTCC...TATTTGTGGTGCCTCCCGTTCCTTCGTAGATGTGTCATTTTTGTGGAAGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
||
| CDS-3UTR GCA 90 bp | TTAAAGCCATGGTTCTCAACCTTCCTTAGGCAGTGGTCCTTTAATACAGTAGTTAGCACCTTCCTGCTTTaGCAACTGATGGAGAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LKPWFSTFLRQWSFNTVVSTFLL*QLMEKE Trigger: CTCCTTCTCCATCAGTTGGCAAAGCAGGAAGGTGCT...AACTACTGTATTAAAGGACCACTGCCTAAGGAAGGTTGAGAACCATGGCTTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
||
| CDS-3UTR CCA 90 bp | TTTTTCTTCCACAAAAATGACACATCTACGAAGGAACGGGAGGCACCACAAATAGTGTGTCTAGGAGTCTaGGGATTTGTAGTCTCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FFFHKNDTSTKEREAPQIVCLGV*GFVVSS Trigger: AGACGAGACTACAAATCCCCAGACTCCTAGACACAC...TATTTGTGGTGCCTCCCGTTCCTTCGTAGATGTGTCATTTTTGTGGAAGAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
||
| 3UTR CAA 72 bp | AGGTACCATTTATTTCCTCTGACAGTCAAAAAGCTCTaGATTTACAGCCCACGGTGGGCTAAAATAGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: RYHLFPLTVKKL*IYSPRWAKIGT Trigger: TGTGCCTATTTTAGCCCACCGTGGGCTGTAAATCAAGAGCTTTTTGACTGTCAGAGGAAATAAATGGTACCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
||
| CDS-3UTR TCA 90 bp | TTAAAGCCATGGTTCTCAACCTTCCTTAGGCAGTGGTCCTTTAATACAGTAGTTGCTTTAAATCAATTGTaGAGTCAGACTTCAGCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LKPWFSTFLRQWSFNTVVALNQL*SQTSAP Trigger: AGGCGCTGAAGTCTGACTTCACAATTGATTTAAAGC...AACTACTGTATTAAAGGACCACTGCCTAAGGAAGGTTGAGAACCATGGCTTTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
||
| CDS-3UTR CCA 90 bp | AATATCCTATTTCCACAAGGACTGGGAAGTGTCCATTTCACACAGCATACACGAAAACCATTCCTTAGATaGGTCATATCGTCTGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: NILFPQGLGSVHFTQHTRKPFLR*VISSEC Trigger: ACACTCAGACGATATGACCCATCTAAGGAATGGTTT...TCGTGTATGCTGTGTGAAATGGACACTTCCCAGTCCTTGTGGAAATAGGATATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
||
| CDS-3UTR CCA 90 bp | TTTTTCTTCCACAAAAATGACACATCTACGAAGGAACGGGAGGCACCACAAATACACTCTTTAATCTTTTaGCAAGCTTGTTCACCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: FFFHKNDTSTKEREAPQIHSLIF*QACSPA Trigger: CGCTGGTGAACAAGCTTGCCAAAAGATTAAAGAGTG...TATTTGTGGTGCCTCCCGTTCCTTCGTAGATGTGTCATTTTTGTGGAAGAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
||
| CDS-3UTR TCA 90 bp | AATAAAAGGTGTCACTGGAAAACGAGGGTTGCTTTAAAGCATGTTGTTCAGATTAAGGTTTTTCCACAATaGCCCCTGTCTGTATTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: NKRCHWKTRVALKHVVQIKVFPQ*PLSVLG Trigger: TCCCAATACAGACAGGGGTCATTGTGGAAAAACCTT...AATCTGAACAACATGCTTTAAAGCAACCCTCGTTTTCCAGTGACACCTTTTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
||
| CDS-3UTR TCA 90 bp | TTTTTCTTCCACAAAAATGACACATCTACGAAGGAACGGGAGGCACCACAAATATGTCATCGTCCACAATaGCTAACCATGAGATTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FFFHKNDTSTKEREAPQICHRPQ*LTMRFC Trigger: ACAAAATCTCATGGTTAGTCATTGTGGACGATGACA...TATTTGTGGTGCCTCCCGTTCCTTCGTAGATGTGTCATTTTTGTGGAAGAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
||
| 3UTR CAA 72 bp | TGTTTATGTGGGATGATAGCCAGTCATATTCTTGTATaGGCGTCCCTGTTACAATGGAGAAAACAGAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: CLCGMIASHILV*ASLLQWRKQKR Trigger: CCTTTTCTGTTTTCTCCATTGTAACAGGGACGCCAATACAAGAATATGACTGGCTATCATCCCACATAAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
||
| CDS-3UTR TCA 90 bp | AATAAAAGGTGTCACTGGAAAACGAGGGTTGCTTTAAAGCATGTTGTTCAGATTGGTATTCTGTCAGCATaGAATTTCTTGCACGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: NKRCHWKTRVALKHVVQIGILSA*NFLHVF Trigger: GAAAACGTGCAAGAAATTTCATGCTGACAGAATACC...AATCTGAACAACATGCTTTAAAGCAACCCTCGTTTTCCAGTGACACCTTTTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| CDS-3UTR GCA 90 bp | TTTTATTCTATAGAAAGGAGGAGAACACATTTTGCAGGTGACTTGTTTAGAGGGCTTGCACGTTTTCACTaGAACAAAAATCTCCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FYSIERRRTHFAGDLFRGLARFH*NKNLLL Trigger: AAGGAGGAGATTTTTGTTGCAGTGAAAACGTGCAAG...CCCTCTAAACAAGTCACCTGCAAAATGTGTTCTCCTCCTTTCTATAGAATAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| CDS-3UTR GCA 90 bp | AACAATTTAAATAGCACCTTTTCAGGCCTGTCATTCAAAGACAGCAGGAACAAATCCACGCTGAATTCTTaGTGTATGTTACAGAAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: NNLNSTFSGLSFKDSRNKSTLNS*CMLQKS Trigger: ACTTTTCTGTAACATACAGCAAGAATTCAGCGTGGA...TTTGTTCCTGCTGTCTTTGAATGACAGGCCTGAAAAGGTGCTATTTAAATTGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| CDS-3UTR GCA 90 bp | AACAATTTAAATAGCACCTTTTCAGGCCTGTCATTCAAAGACAGCAGGAACAAACAGCATGAAATTTCTTaGACGTTTTCACTGCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: NNLNSTFSGLSFKDSRNKQHEIS*TFSLQQ Trigger: TTGTTGCAGTGAAAACGTGCAAGAAATTTCATGCTG...TTTGTTCCTGCTGTCTTTGAATGACAGGCCTGAAAAGGTGCTATTTAAATTGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| 3UTR CAA 72 bp | TCTATAGAAAGGAGGAGAACACATTTTGCAGGTGACTaGTTTAGAGGGCTTGAGGACATAAACAATTTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SIERRRTHFAGD*FRGLEDINNLN Trigger: ATTTAAATTGTTTATGTCCTCAAGCCCTCTAAACAAGTCACCTGCAAAATGTGTTCTCCTCCTTTCTATAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| CDS TCA 90 bp | TCTTTACCGGTACTCCACAGAGCGGTAGGAAAGAATGGAACGTGGTaGCGCAGCGGGGGTCCACATCTTCTGTACAAAACTCAGGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: SLPVLHRAVGKNGTW*RSGGPHLLYKTQAQ Trigger: CTGTGCCTGAGTTTTGTACAGAAGATGTGGACCCCCGCTGCGTCACCACGTTCCATTCTTTCCTACCGCTCTGTGGAGTACCGGTAAAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| CDS-3UTR CAA 90 bp | TGGGGAGGCTGGCAGGGAGCAGAGCCTTCACCAGATGGCCTTGAGTCTGTTTTGGATCCTGTGTCAGATTaGCAGCCTGCTTTAAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: WGGWQGAEPSPDGLESVLDPVSD*QPALRC Trigger: ACATCTTAAAGCAGGCTGCAAATCTGACACAGGATC...CAAAACAGACTCAAGGCCATCTGGTGAAGGCTCTGCTCCCTGCCAGCCTCCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| CDS GCA 90 bp | GTCTGTATTGGGAATTCCCAAATCCACCGTGGGGATGGCGGTTTCTaGATAGTCACTGTAGTATTCGATAAGGCTAGCCTGTGCCGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: VCIGNSQIHRGDGGF*IVTVVFDKASLCRP Trigger: TGGGCGGCACAGGCTAGCCTTATCGAATACTACAGTGACTATGCAGAAACCGCCATCCCCACGGTGGATTTGGGAATTCCCAATACAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| CDS CCA 90 bp | ATCTCCTCCTTCTTTACCGGTACTCCACAGAGCGGTAGGAAAGAATaGAACGTGGTGACGCAGCGGGGGTCCACATCTTCTGTACAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: ISSFFTGTPQSGRKE*NVVTQRGSTSSVQN Trigger: GTTTTGTACAGAAGATGTGGACCCCCGCTGCGTCACCACGTTCCATTCTTTCCTACCGCTCTGTGGAGTACCGGTAAAGAAGGAGGAGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| CDS CCA 90 bp | AGTGTTTGTGAAATGATACTGGAATCTGATGGGCGAGGTAGTCCTTaGGGTAATCTACTGGCCGAGCCTGATGGAAGAGGGGGCTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SVCEMILESDGRGSP*GNLLAEPDGRGGCV Trigger: CACACAGCCCCCTCTTCCATCAGGCTCGGCCAGTAGATTACCCCAAGGACTACCTCGCCCATCAGATTCCAGTATCATTTCACAAACACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
||
| CDS TCA 90 bp | GGTAACAAGGGAAGGATGGTCCAAGCACCTTCCTGCTTTGCCAACTaGTGGAGAAGGAGGACTCTAGGGAGATCCTGTGTCAGATTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: GNKGRMVQAPSCFAN*WRRRTLGRSCVRFA Trigger: TGCAAATCTGACACAGGATCTCCCTAGAGTCCTCCTTCTCCATCAGTTGGCAAAGCAGGAAGGTGCTTGGACCATCCTTCCCTTGTTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| CDS-3UTR CAA 90 bp | TGGGGAGGCTGGCAGGGAGCAGAGCCTTCACCAGATGGCCTTGAGTCTGTTTTGATCCACGCTGAATTCTaGCTGTATGTTACAGAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: WGGWQGAEPSPDGLESVLIHAEF*LYVTEK Trigger: CTTTTCTGTAACATACAGCAAGAATTCAGCGTGGAT...CAAAACAGACTCAAGGCCATCTGGTGAAGGCTCTGCTCCCTGCCAGCCTCCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
||
| CDS TCA 90 bp | CGTGAGGTACACCTTTACCGGGTCAATGTGCCAGTGTTTGTGAAATaGTACTGGAATCTGATGGGCGAGGTAGTCCTTGGGGTAATCTAC | + |
|
Preference number: 5 (lower is better) Translates to: REVHLYRVNVPVFVK*YWNLMGEVVLGVIY Trigger: GTAGATTACCCCAAGGACTACCTCGCCCATCAGATTCCAGTATCATTTCACAAACACTGGCACATTGACCCGGTAAAGGTGTACCTCACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| CDS GCA 90 bp | CAGAAGAAAATCCACGCTGAATTCTTGCTGTATGTTACAGAAAAGTaGGGTAACAAGGGAAGGATGGTCCAAGCACCTTCCTGCTTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: QKKIHAEFLLYVTEK*GNKGRMVQAPSCFA Trigger: GGCAAAGCAGGAAGGTGCTTGGACCATCCTTCCCTTGTTACCGCACTTTTCTGTAACATACAGCAAGAATTCAGCGTGGATTTTCTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
||
| CDS CCA 90 bp | AATTCTTGCTGTATGTTACAGAAAAGTGCGGTAACAAGGGAAGGATaGTCCAAGCACCTTCCTGCTTTGCCAACTGATGGAGAAGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: NSCCMLQKSAVTREG*SKHLPALPTDGEGG Trigger: TCCTCCTTCTCCATCAGTTGGCAAAGCAGGAAGGTGCTTGGACCATCCTTCCCTTGTTACCGCACTTTTCTGTAACATACAGCAAGAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
||
| CDS-3UTR CAA 90 bp | TTTTATTCTATAGAAAGGAGGAGAACACATTTTGCAGGTGACTTGTTTAGAGGGTGTCTCCTGCGTGGCTaGGTCTTCCTCACTGGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: FYSIERRRTHFAGDLFRGCLLRG*VFLTGC Trigger: GCACCCAGTGAGGAAGACCAAGCCACGCAGGAGACA...CCCTCTAAACAAGTCACCTGCAAAATGTGTTCTCCTCCTTTCTATAGAATAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
||
| CDS TCA 90 bp | GCCTGTGCCGCCCATGTCTTCTTTACGATGGGTATTCTGTCAGCATaGAATTTCTTGCACGTTTTCACTGCAACAAAAATCTCCTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ACAAHVFFTMGILSA*NFLHVFTATKISSF Trigger: GAAGGAGGAGATTTTTGTTGCAGTGAAAACGTGCAAGAAATTTCATGCTGACAGAATACCCATCGTAAAGAAGACATGGGCGGCACAGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
||
| CDS GCA 90 bp | GTAGTCTCGTCTCTTCTTCACAGAAGAAAATCCACGCTGAATTCTTaGTGTATGTTACAGAAAAGTGCGGTAACAAGGGAAGGATGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: VVSSLLHRRKSTLNS*CMLQKSAVTREGWS Trigger: GGACCATCCTTCCCTTGTTACCGCACTTTTCTGTAACATACAGCAAGAATTCAGCGTGGATTTTCTTCTGTGAAGAAGAGACGAGACTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
||
| CDS GCA 90 bp | TACGATGGGTATTCTGTCAGCATGAAATTTCTTGCACGTTTTCACTaGAACAAAAATCTCCTCCTTCTTTACCGGTACTCCACAGAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: YDGYSVSMKFLARFH*NKNLLLLYRYSTER Trigger: CCGCTCTGTGGAGTACCGGTAAAGAAGGAGGAGATTTTTGTTGCAGTGAAAACGTGCAAGAAATTTCATGCTGACAGAATACCCATCGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
||
| CDS-3UTR CAA 90 bp | TTAAAGCCATGGTTCTCAACCTTCCTTAGGCAGTGGTCCTTTAATACAGTAGTTAAGCACCTTCCTGCTTaGCCAACTGATGGAGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LKPWFSTFLRQWSFNTVVKHLPA*PTDGEG Trigger: TCCTTCTCCATCAGTTGGCAAAGCAGGAAGGTGCTT...AACTACTGTATTAAAGGACCACTGCCTAAGGAAGGTTGAGAACCATGGCTTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
||
| CDS TCA 90 bp | CTTTGTCCCAGATGTAGAGGGCAATCTCGTGCTTTAAATCAATTGTaGAGTCAGACTTCAGCGCCTCACTCTTTAATCTTTTGGCAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LCPRCRGQSRALNQL*SQTSAPHSLIFWQA Trigger: AGCTTGCCAAAAGATTAAAGAGTGAGGCGCTGAAGTCTGACTTCACAATTGATTTAAAGCACGAGATTGCCCTCTACATCTGGGACAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
||
| CDS GCA 90 bp | CCCATGTCTTCTTTACGATGGGTATTCTGTCAGCATGAAATTTCTTaGACGTTTTCACTGCAACAAAAATCTCCTCCTTCTTTACCGGTA | + |
|
Preference number: 5 (lower is better) Translates to: PMSSLRWVFCQHEIS*TFSLQQKSPPSLPV Trigger: TACCGGTAAAGAAGGAGGAGATTTTTGTTGCAGTGAAAACGTGCAAGAAATTTCATGCTGACAGAATACCCATCGTAAAGAAGACATGGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
||
| CDS-3UTR CAA 90 bp | AATAAAAGGTGTCACTGGAAAACGAGGGTTGCTTTAAAGCATGTTGTTCAGATTAATCTTTTGGCAAGCTaGTTCACCAGCGGGATGCTA | + |
|
Preference number: 5 (lower is better) Translates to: NKRCHWKTRVALKHVVQINLLAS*FTSGML Trigger: TAGCATCCCGCTGGTGAACAAGCTTGCCAAAAGATT...AATCTGAACAACATGCTTTAAAGCAACCCTCGTTTTCCAGTGACACCTTTTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
||
| CDS-3UTR CAA 90 bp | AACAATTTAAATAGCACCTTTTCAGGCCTGTCATTCAAAGACAGCAGGAACAAATCACTCTTTAATCTTTaGGCAAGCTTGTTCACCAGC | + |
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Preference number: 5 (lower is better) Translates to: NNLNSTFSGLSFKDSRNKSLFNL*ASLFTS Trigger: GCTGGTGAACAAGCTTGCCAAAAGATTAAAGAGTGA...TTTGTTCCTGCTGTCTTTGAATGACAGGCCTGAAAAGGTGCTATTTAAATTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| CDS GCA 72 bp | GAACCATGTCGTCCGGAGCGTCATTGCTGTAGCATCTaGAGCTGCTCACGAGAAGTCTCCGGATGGCTTCCC | + |
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Preference number: 6 (lower is better) Translates to: EPCRPERHCCSI*SCSREVSGWLP Trigger: GGGAAGCCATCCGGAGACTTCTCGTGAGCAGCTGCAGATGCTACAGCAATGACGCTCCGGACGACATGGTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| CDS GCA 72 bp | AGCACATGCCCAGAACCATGTCGTCCGGAGCGTCATTaGTGTAGCATCTGCAGCTGCTCACGAGAAGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: STCPEPCRPERH*CSICSCSREVS Trigger: GGAGACTTCTCGTGAGCAGCTGCAGATGCTACAGCAATGACGCTCCGGACGACATGGTTCTGGGCATGTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| CDS TCA 72 bp | GGAAGGATGGTCCAAGCACCTTCCTGCTTTGCCAACTaGTGGAGAAGGAGGACTCTAGGGAGATCCTGTGTC | + |
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Preference number: 6 (lower is better) Translates to: GRMVQAPSCFAN*WRRRTLGRSCV Trigger: GACACAGGATCTCCCTAGAGTCCTCCTTCTCCATCAGTTGGCAAAGCAGGAAGGTGCTTGGACCATCCTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| CDS CCA 72 bp | TTCTTTACCGGTACTCCACAGAGCGGTAGGAAAGAATaGAACGTGGTGACGCAGCGGGGGTCCACATCTTCT | + |
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Preference number: 6 (lower is better) Translates to: FFTGTPQSGRKE*NVVTQRGSTSS Trigger: AGAAGATGTGGACCCCCGCTGCGTCACCACGTTCCATTCTTTCCTACCGCTCTGTGGAGTACCGGTAAAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| CDS CAA 72 bp | GACTTCAGCGCCTCACTCTTTAATCTTTTGGCAAGCTaGTTCACCAGCGGGATGCTAAGGGCCCAGCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: DFSASLFNLLAS*FTSGMLRAQPA Trigger: TGCTGGCTGGGCCCTTAGCATCCCGCTGGTGAACAAGCTTGCCAAAAGATTAAAGAGTGAGGCGCTGAAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| CDS TCA 72 bp | GTACTCCACAGAGCGGTAGGAAAGAATGGAACGTGGTaGCGCAGCGGGGGTCCACATCTTCTGTACAAAACT | + |
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Preference number: 6 (lower is better) Translates to: VLHRAVGKNGTW*RSGGPHLLYKT Trigger: AGTTTTGTACAGAAGATGTGGACCCCCGCTGCGTCACCACGTTCCATTCTTTCCTACCGCTCTGTGGAGTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| CDS CCA 72 bp | GAAATGATACTGGAATCTGATGGGCGAGGTAGTCCTTaGGGTAATCTACTGGCCGAGCCTGATGGAAGAGGG | + |
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Preference number: 6 (lower is better) Translates to: EMILESDGRGSP*GNLLAEPDGRG Trigger: CCCTCTTCCATCAGGCTCGGCCAGTAGATTACCCCAAGGACTACCTCGCCCATCAGATTCCAGTATCATTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| CDS GCA 72 bp | GGGAATTCCCAAATCCACCGTGGGGATGGCGGTTTCTaGATAGTCACTGTAGTATTCGATAAGGCTAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: GNSQIHRGDGGF*IVTVVFDKASL Trigger: CAGGCTAGCCTTATCGAATACTACAGTGACTATGCAGAAACCGCCATCCCCACGGTGGATTTGGGAATTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| CDS CAA 72 bp | GTGAAGTCAGACTTCAGCGCCTCACTCTTTAATCTTTaGGCAAGCTTGTTCACCAGCGGGATGCTAAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: VKSDFSASLFNL*ASLFTSGMLRA Trigger: GGCCCTTAGCATCCCGCTGGTGAACAAGCTTGCCAAAAGATTAAAGAGTGAGGCGCTGAAGTCTGACTTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| CDS TCA 72 bp | CACCTTTACCGGGTCAATGTGCCAGTGTTTGTGAAATaGTACTGGAATCTGATGGGCGAGGTAGTCCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: HLYRVNVPVFVK*YWNLMGEVVLG Trigger: CCCAAGGACTACCTCGCCCATCAGATTCCAGTATCATTTCACAAACACTGGCACATTGACCCGGTAAAGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| CDS CCA 72 bp | CCAGCCAGCAGCGAAGTCGGGATATTTAAAGACTGTTaGGTTCTCAGAGAAGGCGTAATGGTGGATGATCGT | + |
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Preference number: 6 (lower is better) Translates to: PASSEVGIFKDC*VLREGVMVDDR Trigger: ACGATCATCCACCATTACGCCTTCTCTGAGAACCCAACAGTCTTTAAATATCCCGACTTCGCTGCTGGCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| CDS CAA 90 bp | AAATCAATTGTGAAGTCAGACTTCAGCGCCTCACTCTTTAATCTTTaGGCAAGCTTGTTCACCAGCGGGATGCTAAGGGCCCAGCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: KSIVKSDFSASLFNL*ASLFTSGMLRAQPA Trigger: TGCTGGCTGGGCCCTTAGCATCCCGCTGGTGAACAAGCTTGCCAAAAGATTAAAGAGTGAGGCGCTGAAGTCTGACTTCACAATTGATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| CDS GCA 72 bp | ATCCACGCTGAATTCTTGCTGTATGTTACAGAAAAGTaGGGTAACAAGGGAAGGATGGTCCAAGCACCTTCC | + |
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Preference number: 6 (lower is better) Translates to: IHAEFLLYVTEK*GNKGRMVQAPS Trigger: GGAAGGTGCTTGGACCATCCTTCCCTTGTTACCGCACTTTTCTGTAACATACAGCAAGAATTCAGCGTGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| CDS CCA 72 bp | TGTATGTTACAGAAAAGTGCGGTAACAAGGGAAGGATaGTCCAAGCACCTTCCTGCTTTGCCAACTGATGGA | + |
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Preference number: 6 (lower is better) Translates to: CMLQKSAVTREG*SKHLPALPTDG Trigger: TCCATCAGTTGGCAAAGCAGGAAGGTGCTTGGACCATCCTTCCCTTGTTACCGCACTTTTCTGTAACATACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| CDS CAA 90 bp | TGTAGTCTCGTCTCTTCTTCACAGAAGAAAATCCACGCTGAATTCTaGCTGTATGTTACAGAAAAGTGCGGTAACAAGGGAAGGATGGTC | + |
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Preference number: 6 (lower is better) Translates to: CSLVSSSQKKIHAEF*LYVTEKCGNKGRMV Trigger: GACCATCCTTCCCTTGTTACCGCACTTTTCTGTAACATACAGCAAGAATTCAGCGTGGATTTTCTTCTGTGAAGAAGAGACGAGACTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| CDS TCA 72 bp | AGATGTAGAGGGCAATCTCGTGCTTTAAATCAATTGTaGAGTCAGACTTCAGCGCCTCACTCTTTAATCTTT | + |
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Preference number: 6 (lower is better) Translates to: RCRGQSRALNQL*SQTSAPHSLIF Trigger: AAAGATTAAAGAGTGAGGCGCTGAAGTCTGACTTCACAATTGATTTAAAGCACGAGATTGCCCTCTACATCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| CDS TCA 72 bp | GCCCATGTCTTCTTTACGATGGGTATTCTGTCAGCATaGAATTTCTTGCACGTTTTCACTGCAACAAAAATC | + |
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Preference number: 6 (lower is better) Translates to: AHVFFTMGILSA*NFLHVFTATKI Trigger: GATTTTTGTTGCAGTGAAAACGTGCAAGAAATTTCATGCTGACAGAATACCCATCGTAAAGAAGACATGGGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| CDS GCA 72 bp | TCTCTTCTTCACAGAAGAAAATCCACGCTGAATTCTTaGTGTATGTTACAGAAAAGTGCGGTAACAAGGGAA | + |
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Preference number: 6 (lower is better) Translates to: SLLHRRKSTLNS*CMLQKSAVTRE Trigger: TTCCCTTGTTACCGCACTTTTCTGTAACATACAGCAAGAATTCAGCGTGGATTTTCTTCTGTGAAGAAGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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| CDS GCA 72 bp | TCTTTACGATGGGTATTCTGTCAGCATGAAATTTCTTaGACGTTTTCACTGCAACAAAAATCTCCTCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: SLRWVFCQHEIS*TFSLQQKSPPS Trigger: AGAAGGAGGAGATTTTTGTTGCAGTGAAAACGTGCAAGAAATTTCATGCTGACAGAATACCCATCGTAAAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100404.6 |
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