Pregenerated sensors for B3GAT2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026156Ensembl transcript IDs: ENSMUST00000063663.6, ENSMUST00000140583.2, ENSMUST00000144602.2
Found 152 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AACGCTAGTGCAGGTTTTGGCCAGCCTCCCAGCACGACAGCAGGGTaGTCTGGAAGCTCATCGGGGCAGACGCTGAGCACACAGCTGTGG | + |
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Preference number: 1 (lower is better) Translates to: NASAGFGQPPSTTAG*SGSSSGQTLSTQLW Trigger: CCACAGCTGTGTGCTCAGCGTCTGCCCCGATGAGCTTCCAGACCACCCTGCTGTCGTGCTGGGAGGCTGGCCAAAACCTGCACTAGCGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| 3UTR TCA 90 bp | CCAGCACGACAGCAGGGTGGTCTGGAAGCTCATCGGGGCAGACGCTaGGCACACAGCTGTGGAAGTAAGAAGCTGTCACAGAGTTCCATC | + |
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Preference number: 1 (lower is better) Translates to: PARQQGGLEAHRGRR*AHSCGSKKLSQSSI Trigger: GATGGAACTCTGTGACAGCTTCTTACTTCCACAGCTGTGTGCTCAGCGTCTGCCCCGATGAGCTTCCAGACCACCCTGCTGTCGTGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| 3UTR TCA 90 bp | GGAGGGAGGGATGGAGGGAGGGAGGGAGGGAGGGAGGGAGCAGTGTaGGATACTTCGTTGTCCTTTTCAGTGACATGTGGCTTCACTCTA | + |
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Preference number: 1 (lower is better) Translates to: GGRDGGREGGREGAV*DTSLSFSVTCGFTL Trigger: TAGAGTGAAGCCACATGTCACTGAAAAGGACAACGAAGTATCTCACACTGCTCCCTCCCTCCCTCCCTCCCTCCCTCCATCCCTCCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| 3UTR CCA 90 bp | GGTGGGCATGCCCATGCACAATGGGTTCATGGGAAACGCACAGACTaGAGTGATGCCACTTCCTCAGAATGTTGTTGGCCCTCAGGGAGG | + |
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Preference number: 1 (lower is better) Translates to: GGHAHAQWVHGKRTD*SDATSSECCWPSGR Trigger: CCTCCCTGAGGGCCAACAACATTCTGAGGAAGTGGCATCACTCCAGTCTGTGCGTTTCCCATGAACCCATTGTGCATGGGCATGCCCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| 3UTR CCA 90 bp | TTCCTCAGAATGTTGTTGGCCCTCAGGGAGGAATGGTGGGACAAATaGGTGCACCACAGAGTAAGTTCGGCTTGCCACAAGCCCAGCAGC | + |
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Preference number: 1 (lower is better) Translates to: FLRMLLALREEWWDK*VHHRVSSACHKPSS Trigger: GCTGCTGGGCTTGTGGCAAGCCGAACTTACTCTGTGGTGCACCCATTTGTCCCACCATTCCTCCCTGAGGGCCAACAACATTCTGAGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| 3UTR TCA 90 bp | GCATGCCCATGCACAATGGGTTCATGGGAAACGCACAGACTGGAGTaGTGCCACTTCCTCAGAATGTTGTTGGCCCTCAGGGAGGAATGG | + |
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Preference number: 1 (lower is better) Translates to: ACPCTMGSWETHRLE*CHFLRMLLALREEW Trigger: CCATTCCTCCCTGAGGGCCAACAACATTCTGAGGAAGTGGCATCACTCCAGTCTGTGCGTTTCCCATGAACCCATTGTGCATGGGCATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| 3UTR CCA 90 bp | CTTGGGCAGCATCTAAGACATACCTCAGCTCCTACCTGTCAGGCTTaGTGCCAGCCATGCTTACTTGGCTCCTGGGTGGGATCTCTTCAT | + |
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Preference number: 1 (lower is better) Translates to: LGQHLRHTSAPTCQA*CQPCLLGSWVGSLH Trigger: ATGAAGAGATCCCACCCAGGAGCCAAGTAAGCATGGCTGGCACCAAGCCTGACAGGTAGGAGCTGAGGTATGTCTTAGATGCTGCCCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| 3UTR CCA 90 bp | GATGGGACAGAATACTGGCATGATGGTGGGCATGCCCATGCACAATaGGTTCATGGGAAACGCACAGACTGGAGTGATGCCACTTCCTCA | + |
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Preference number: 1 (lower is better) Translates to: DGTEYWHDGGHAHAQ*VHGKRTDWSDATSS Trigger: TGAGGAAGTGGCATCACTCCAGTCTGTGCGTTTCCCATGAACCCATTGTGCATGGGCATGCCCACCATCATGCCAGTATTCTGTCCCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| 3UTR GCA 90 bp | ACCGACTGCATTTCAAGGTTTTCCTTCCATGGGCGTCCCAGTGCCTaGAGCTCCCGGTCTTATAGGAAATATGATGGGACAGAATACTGG | + |
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Preference number: 1 (lower is better) Translates to: TDCISRFSFHGRPSA*SSRSYRKYDGTEYW Trigger: CCAGTATTCTGTCCCATCATATTTCCTATAAGACCGGGAGCTGCAGGCACTGGGACGCCCATGGAAGGAAAACCTTGAAATGCAGTCGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| 3UTR GCA 90 bp | GCCACCCACCTACCTCTTCATAAAACAAAGAACCACTTCTCTCCCTaGCTGGTTGGGTTTTGTGAGAGCAGTGGTACCAGTCAGCAAGAG | + |
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Preference number: 1 (lower is better) Translates to: ATHLPLHKTKNHFSP*LVGFCESSGTSQQE Trigger: CTCTTGCTGACTGGTACCACTGCTCTCACAAAACCCAACCAGGCAGGGAGAGAAGTGGTTCTTTGTTTTATGAAGAGGTAGGTGGGTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| 3UTR CCA 90 bp | GCCTGCAGCTCCCGGTCTTATAGGAAATATGATGGGACAGAATACTaGCATGATGGTGGGCATGCCCATGCACAATGGGTTCATGGGAAA | + |
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Preference number: 1 (lower is better) Translates to: ACSSRSYRKYDGTEY*HDGGHAHAQWVHGK Trigger: TTTCCCATGAACCCATTGTGCATGGGCATGCCCACCATCATGCCAGTATTCTGTCCCATCATATTTCCTATAAGACCGGGAGCTGCAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| 3UTR CCA 90 bp | CCCACCTACCTCTTCATAAAACAAAGAACCACTTCTCTCCCTGCCTaGTTGGGTTTTGTGAGAGCAGTGGTACCAGTCAGCAAGAGCAGC | + |
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Preference number: 1 (lower is better) Translates to: PTYLFIKQRTTSLPA*LGFVRAVVPVSKSS Trigger: GCTGCTCTTGCTGACTGGTACCACTGCTCTCACAAAACCCAACCAGGCAGGGAGAGAAGTGGTTCTTTGTTTTATGAAGAGGTAGGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| 3UTR TCA 90 bp | TTTATGAGGGATCAAGGCTGCCGCTGTCATGTGGTTACTGCCTGTTaGTGTATGAGGAACATCCATTGGCTCAGGAATCCCCATGGTGAG | + |
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Preference number: 1 (lower is better) Translates to: FMRDQGCRCHVVTAC*CMRNIHWLRNPHGE Trigger: CTCACCATGGGGATTCCTGAGCCAATGGATGTTCCTCATACATCAACAGGCAGTAACCACATGACAGCGGCAGCCTTGATCCCTCATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| 3UTR GCA 90 bp | GTTTATGGGACCCACAAATATACCATTTACCTCACAAGCACCGACTaGATTTCAAGGTTTTCCTTCCATGGGCGTCCCAGTGCCTGCAGC | + |
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Preference number: 1 (lower is better) Translates to: VYGTHKYTIYLTSTD*ISRFSFHGRPSACS Trigger: GCTGCAGGCACTGGGACGCCCATGGAAGGAAAACCTTGAAATGCAGTCGGTGCTTGTGAGGTAAATGGTATATTTGTGGGTCCCATAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| 3UTR CCA 90 bp | GCCAGTGAAGAACAGCAAGGCCACAAGAGTGAGCAGAAGGGAAGATaGAAGCTACCTGTCTGTAGACACATGTGTGCTTATTATGTCTTG | + |
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Preference number: 1 (lower is better) Translates to: ASEEQQGHKSEQKGR*KLPVCRHMCAYYVL Trigger: CAAGACATAATAAGCACACATGTGTCTACAGACAGGTAGCTTCCATCTTCCCTTCTGCTCACTCTTGTGGCCTTGCTGTTCTTCACTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| 3UTR TCA 90 bp | CTGTTGATGTATGAGGAACATCCATTGGCTCAGGAATCCCCATGGTaGGAATGTAAACCCTGCTTCCCTCAGGTATTCACTGATAAATTC | + |
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Preference number: 1 (lower is better) Translates to: LLMYEEHPLAQESPW*ECKPCFPQVFTDKF Trigger: GAATTTATCAGTGAATACCTGAGGGAAGCAGGGTTTACATTCTCACCATGGGGATTCCTGAGCCAATGGATGTTCCTCATACATCAACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| 3UTR TCA 90 bp | AACATTCACAGAATCACCGTGTATCTTACAAATGCTCGTGTGCTGTaGCAGCTGCGGTTTATAGGTATATACGTACACACTGCTTATGCA | + |
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Preference number: 1 (lower is better) Translates to: NIHRITVYLTNARVL*QLRFIGIYVHTAYA Trigger: TGCATAAGCAGTGTGTACGTATATACCTATAAACCGCAGCTGTCACAGCACACGAGCATTTGTAAGATACACGGTGATTCTGTGAATGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| 3UTR GCA 90 bp | ACAGATAATGTTGAACATAGGTTTGAAACTATTTTAGGTAAATCCTaGATCTCTTGTTCCGTCACCAAACTGGGTAGTGGGAGAACTACT | + |
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Preference number: 1 (lower is better) Translates to: TDNVEHRFETILGKS*ISCSVTKLGSGRTT Trigger: AGTAGTTCTCCCACTACCCAGTTTGGTGACGGAACAAGAGATGCAGGATTTACCTAAAATAGTTTCAAACCTATGTTCAACATTATCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| 3UTR-3UTR TCA 90 bp | TCAGTAGTGCTAACGCTAGTGCAGGTTTTGGCCAGCCTCCCAGCACGACAGCAGCAAAGGAACAGTACCTaGATGGGCAGCAGCCCACGC | + |
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Preference number: 2 (lower is better) Translates to: SVVLTLVQVLASLPARQQQRNST*MGSSPR Trigger: GCGTGGGCTGCTGCCCATTCAGGTACTGTTCCTTTG...CTGCTGTCGTGCTGGGAGGCTGGCCAAAACCTGCACTAGCGTTAGCACTACTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| 3UTR-3UTR TCA 90 bp | ACTGGCATGATGGTGGGCATGCCCATGCACAATGGGTTCATGGGAAACGCACAGCATCGGGGCAGACGCTaGGCACACAGCTGTGGAAGT | + |
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Preference number: 2 (lower is better) Translates to: TGMMVGMPMHNGFMGNAQHRGRR*AHSCGS Trigger: ACTTCCACAGCTGTGTGCTCAGCGTCTGCCCCGATG...CTGTGCGTTTCCCATGAACCCATTGTGCATGGGCATGCCCACCATCATGCCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| 3UTR CAA 90 bp | GGAGGAATGGTGGGACAAATGGGTGCACCACAGAGTAAGTTCGGCTaGCCACAAGCCCAGCAGCCTCAGTGGAACCTCTCACAGGTAAGG | + |
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Preference number: 2 (lower is better) Translates to: GGMVGQMGAPQSKFG*PQAQQPQWNLSQVR Trigger: CCTTACCTGTGAGAGGTTCCACTGAGGCTGCTGGGCTTGTGGCAAGCCGAACTTACTCTGTGGTGCACCCATTTGTCCCACCATTCCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| 3UTR-3UTR CCA 90 bp | GACGCTGAGCACACAGCTGTGGAAGTAAGAAGCTGTCACAGAGTTCCATCCAGAGGAACAGTACCTGAATaGGCAGCAGCCCACGCTCCA | + |
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Preference number: 2 (lower is better) Translates to: DAEHTAVEVRSCHRVPSRGTVPE*AAAHAP Trigger: TGGAGCGTGGGCTGCTGCCCATTCAGGTACTGTTCC...TCTGGATGGAACTCTGTGACAGCTTCTTACTTCCACAGCTGTGTGCTCAGCGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| 3UTR-3UTR TCA 90 bp | AGTAAGTTCGGCTTGCCACAAGCCCAGCAGCCTCAGTGGAACCTCTCACAGGTACTAAGGAGTCAGGAGTaGAAAGAGGGTCCTCCTTGT | + |
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Preference number: 2 (lower is better) Translates to: SKFGLPQAQQPQWNLSQVLRSQE*KEGPPC Trigger: ACAAGGAGGACCCTCTTTTCACTCCTGACTCCTTAG...TACCTGTGAGAGGTTCCACTGAGGCTGCTGGGCTTGTGGCAAGCCGAACTTACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| 3UTR-3UTR CCA 90 bp | AGTAAGTTCGGCTTGCCACAAGCCCAGCAGCCTCAGTGGAACCTCTCACAGGTACTAGCAGTATTGAGATaGCTTGTGGGAGGGAGGGAT | + |
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Preference number: 2 (lower is better) Translates to: SKFGLPQAQQPQWNLSQVLAVLR*LVGGRD Trigger: ATCCCTCCCTCCCACAAGCCATCTCAATACTGCTAG...TACCTGTGAGAGGTTCCACTGAGGCTGCTGGGCTTGTGGCAAGCCGAACTTACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| 3UTR-3UTR CCA 90 bp | AGTAAGTTCGGCTTGCCACAAGCCCAGCAGCCTCAGTGGAACCTCTCACAGGTAATGAGGAACATCCATTaGCTCAGGAATCCCCATGGT | + |
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Preference number: 2 (lower is better) Translates to: SKFGLPQAQQPQWNLSQVMRNIH*LRNPHG Trigger: ACCATGGGGATTCCTGAGCCAATGGATGTTCCTCAT...TACCTGTGAGAGGTTCCACTGAGGCTGCTGGGCTTGTGGCAAGCCGAACTTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| 3UTR-3UTR TCA 90 bp | AAGAACAGCAAGGCCACAAGAGTGAGCAGAAGGGAAGATGGAAGCTACCTGTCTGCGGTAAGGAAAGGCTaGAGGCAAAGGAACAGTACC | + |
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Preference number: 2 (lower is better) Translates to: KNSKATRVSRREDGSYLSAVRKG*RQRNST Trigger: GGTACTGTTCCTTTGCCTTCAGCCTTTCCTTACCGC...AGACAGGTAGCTTCCATCTTCCCTTCTGCTCACTCTTGTGGCCTTGCTGTTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| 3UTR-3UTR TCA 90 bp | TGCGTCTGTCTGTGTCCTGGAGTAACAGCTCTGAAGGTTGAGGCATGGGTTGTTAATGCTCGTGTGCTGTaGCAGCTGCGGTTTATAGGT | + |
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Preference number: 2 (lower is better) Translates to: CVCLCPGVTALKVEAWVVNARVL*QLRFIG Trigger: ACCTATAAACCGCAGCTGTCACAGCACACGAGCATT...AACAACCCATGCCTCAACCTTCAGAGCTGTTACTCCAGGACACAGACAGACGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| 3UTR-3UTR GCA 90 bp | AGTAAGTTCGGCTTGCCACAAGCCCAGCAGCCTCAGTGGAACCTCTCACAGGTATTACAAATGCTCGTGTaGTGTGACAGCTGCGGTTTA | + |
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Preference number: 2 (lower is better) Translates to: SKFGLPQAQQPQWNLSQVLQMLV*CDSCGL Trigger: TAAACCGCAGCTGTCACAGCACACGAGCATTTGTAA...TACCTGTGAGAGGTTCCACTGAGGCTGCTGGGCTTGTGGCAAGCCGAACTTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| 3UTR-3UTR TCA 90 bp | TGCGTCTGTCTGTGTCCTGGAGTAACAGCTCTGAAGGTTGAGGCATGGGTTGTTCGTTGTCCTTTTCAGTaGCATGTGGCTTCACTCTAC | + |
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Preference number: 2 (lower is better) Translates to: CVCLCPGVTALKVEAWVVRCPFQ*HVASLY Trigger: GTAGAGTGAAGCCACATGTCACTGAAAAGGACAACG...AACAACCCATGCCTCAACCTTCAGAGCTGTTACTCCAGGACACAGACAGACGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| 3UTR-3UTR GCA 90 bp | AGTAAGTTCGGCTTGCCACAAGCCCAGCAGCCTCAGTGGAACCTCTCACAGGTAGCTGTTGTTATGATGTaGTTAACAGGGAACGTGGTT | + |
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Preference number: 2 (lower is better) Translates to: SKFGLPQAQQPQWNLSQVAVVMM*LTGNVV Trigger: AACCACGTTCCCTGTTAAGCACATCATAACAACAGC...TACCTGTGAGAGGTTCCACTGAGGCTGCTGGGCTTGTGGCAAGCCGAACTTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| 3UTR-3UTR CCA 90 bp | TGCGTCTGTCTGTGTCCTGGAGTAACAGCTCTGAAGGTTGAGGCATGGGTTGTTGAATGGTGGGACAAATaGGTGCACCACAGAGTAAGT | + |
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Preference number: 2 (lower is better) Translates to: CVCLCPGVTALKVEAWVVEWWDK*VHHRVS Trigger: ACTTACTCTGTGGTGCACCCATTTGTCCCACCATTC...AACAACCCATGCCTCAACCTTCAGAGCTGTTACTCCAGGACACAGACAGACGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| 3UTR CAA 90 bp | ACCTACCTCTTCATAAAACAAAGAACCACTTCTCTCCCTGCCTGGTaGGGTTTTGTGAGAGCAGTGGTACCAGTCAGCAAGAGCAGCATG | + |
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Preference number: 2 (lower is better) Translates to: TYLFIKQRTTSLPAW*GFVRAVVPVSKSSM Trigger: CATGCTGCTCTTGCTGACTGGTACCACTGCTCTCACAAAACCCAACCAGGCAGGGAGAGAAGTGGTTCTTTGTTTTATGAAGAGGTAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| 3UTR-3UTR TCA 90 bp | AGTAAGTTCGGCTTGCCACAAGCCCAGCAGCCTCAGTGGAACCTCTCACAGGTACTGGGAATATTTAATTaGCAGAGTACTCCTCATCAG | + |
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Preference number: 2 (lower is better) Translates to: SKFGLPQAQQPQWNLSQVLGIFN*QSTPHQ Trigger: CTGATGAGGAGTACTCTGTCAATTAAATATTCCCAG...TACCTGTGAGAGGTTCCACTGAGGCTGCTGGGCTTGTGGCAAGCCGAACTTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| 3UTR-3UTR GCA 90 bp | TCAGTAGTGCTAACGCTAGTGCAGGTTTTGGCCAGCCTCCCAGCACGACAGCAGGCTGCTCAGTTAACTTaGATAATCAGTTTTATTTGC | + |
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Preference number: 2 (lower is better) Translates to: SVVLTLVQVLASLPARQQAAQLT*IISFIC Trigger: GCAAATAAAACTGATTATGCAAGTTAACTGAGCAGC...CTGCTGTCGTGCTGGGAGGCTGGCCAAAACCTGCACTAGCGTTAGCACTACTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| 3UTR-3UTR GCA 90 bp | CCTTTCTCCGGAGAGGAGTGCAGCCATATAAAGAGCCTCTTCTTGACCTGTTCTTCACTCACTCCACTGTaGTGTTGTTATGATGTGCTT | + |
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Preference number: 2 (lower is better) Translates to: PFSGEECSHIKSLFLTCSSLTPL*CCYDVL Trigger: AAGCACATCATAACAACAGCACAGTGGAGTGAGTGA...AGAACAGGTCAAGAAGAGGCTCTTTATATGGCTGCACTCCTCTCCGGAGAAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| 3UTR-3UTR CCA 90 bp | GACGCTGAGCACACAGCTGTGGAAGTAAGAAGCTGTCACAGAGTTCCATCCAGACTTTTCAGTGACATGTaGCTTCACTCTACAAAACTC | + |
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Preference number: 2 (lower is better) Translates to: DAEHTAVEVRSCHRVPSRLFSDM*LHSTKL Trigger: GAGTTTTGTAGAGTGAAGCCACATGTCACTGAAAAG...TCTGGATGGAACTCTGTGACAGCTTCTTACTTCCACAGCTGTGTGCTCAGCGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| 3UTR-3UTR CCA 90 bp | CCTTTCTCCGGAGAGGAGTGCAGCCATATAAAGAGCCTCTTCTTGACCTGTTCTGAAGTAGTCTTATCTTaGGCAGCATCTAAGACATAC | + |
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Preference number: 2 (lower is better) Translates to: PFSGEECSHIKSLFLTCSEVVLS*AASKTY Trigger: GTATGTCTTAGATGCTGCCCAAGATAAGACTACTTC...AGAACAGGTCAAGAAGAGGCTCTTTATATGGCTGCACTCCTCTCCGGAGAAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| 3UTR-3UTR TCA 90 bp | GTGACAGCTGCGGTTTATAGGTATATACGTACACACTGCTTATGCATTGGAAACACATTAAGAATGACCTaGTTGACCGTGTTGGTCTGT | + |
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Preference number: 2 (lower is better) Translates to: VTAAVYRYIRTHCLCIGNTLRMT*LTVLVC Trigger: ACAGACCAACACGGTCAATCAGGTCATTCTTAATGT...GTTTCCAATGCATAAGCAGTGTGTACGTATATACCTATAAACCGCAGCTGTCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| 3UTR-3UTR TCA 90 bp | CCACATTGGGAAGCTGCTCAGTTAACTTGCATAATCAGTTTTATTTGCAAAATTAGGGAGGGAGCAGTGTaGGATACTTCGTTGTCCTTT | + |
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Preference number: 2 (lower is better) Translates to: PHWEAAQLTCIISFICKIREGAV*DTSLSF Trigger: AAAGGACAACGAAGTATCTCACACTGCTCCCTCCCT...AATTTTGCAAATAAAACTGATTATGCAAGTTAACTGAGCAGCTTCCCAATGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| 3UTR-3UTR GCA 90 bp | GTTTTACTTTCTAAAATGTCTCAGTCTTGGAGTCACAGAAGAGTGATGGTCTCAGCCACATTGGGAAGCTaGTCAGTTAACTTGCATAAT | + |
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Preference number: 2 (lower is better) Translates to: VLLSKMSQSWSHRRVMVSATLGS*SVNLHN Trigger: ATTATGCAAGTTAACTGAGCAGCTTCCCAATGTGGC...TGAGACCATCACTCTTCTGTGACTCCAAGACTGAGACATTTTAGAAAGTAAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| 3UTR-3UTR GCA 90 bp | GTTTTACTTTCTAAAATGTCTCAGTCTTGGAGTCACAGAAGAGTGATGGTCTCAATGAAGACCTTTTTCTaGACTATATGCACACAGGGT | + |
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Preference number: 2 (lower is better) Translates to: VLLSKMSQSWSHRRVMVSMKTFF*TICTQG Trigger: ACCCTGTGTGCATATAGTGCAGAAAAAGGTCTTCAT...TGAGACCATCACTCTTCTGTGACTCCAAGACTGAGACATTTTAGAAAGTAAAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| 3UTR-3UTR TCA 90 bp | GTTTTACTTTCTAAAATGTCTCAGTCTTGGAGTCACAGAAGAGTGATGGTCTCAGCCACTTTTAATCCTTaGAGGTATATCCAGGTTTAT | + |
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Preference number: 2 (lower is better) Translates to: VLLSKMSQSWSHRRVMVSATFNP*RYIQVY Trigger: ATAAACCTGGATATACCTTCAAGGATTAAAAGTGGC...TGAGACCATCACTCTTCTGTGACTCCAAGACTGAGACATTTTAGAAAGTAAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| 3UTR CCA 72 bp | GCAGGTTTTGGCCAGCCTCCCAGCACGACAGCAGGGTaGTCTGGAAGCTCATCGGGGCAGACGCTGAGCACA | + |
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Preference number: 3 (lower is better) Translates to: AGFGQPPSTTAG*SGSSSGQTLST Trigger: TGTGCTCAGCGTCTGCCCCGATGAGCTTCCAGACCACCCTGCTGTCGTGCTGGGAGGCTGGCCAAAACCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| 3UTR CCA 72 bp | TCTAGCAGTATTGAGATGGCTTGTGGGAGGGAGGGATaGAGGGAGGGAGGGAGGGAGGGAGGGAGCAGTGTG | + |
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Preference number: 3 (lower is better) Translates to: SSSIEMACGREG*REGGREGGSSV Trigger: CACACTGCTCCCTCCCTCCCTCCCTCCCTCCCTCCATCCCTCCCTCCCACAAGCCATCTCAATACTGCTAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| 3UTR-3UTR CAA 90 bp | AGTAAGTTCGGCTTGCCACAAGCCCAGCAGCCTCAGTGGAACCTCTCACAGGTAACGCTAGTGCAGGTTTaGGCCAGCCTCCCAGCACGA | + |
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Preference number: 3 (lower is better) Translates to: SKFGLPQAQQPQWNLSQVTLVQV*ASLPAR Trigger: TCGTGCTGGGAGGCTGGCCAAAACCTGCACTAGCGT...TACCTGTGAGAGGTTCCACTGAGGCTGCTGGGCTTGTGGCAAGCCGAACTTACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| 3UTR-3UTR CAA 90 bp | ACTGGCATGATGGTGGGCATGCCCATGCACAATGGGTTCATGGGAAACGCACAGGCCAGCCATGCTTACTaGGCTCCTGGGTGGGATCTC | + |
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Preference number: 3 (lower is better) Translates to: TGMMVGMPMHNGFMGNAQASHAY*APGWDL Trigger: GAGATCCCACCCAGGAGCCAAGTAAGCATGGCTGGC...CTGTGCGTTTCCCATGAACCCATTGTGCATGGGCATGCCCACCATCATGCCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| 3UTR TCA 72 bp | GATGGAGGGAGGGAGGGAGGGAGGGAGGGAGCAGTGTaGGATACTTCGTTGTCCTTTTCAGTGACATGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: DGGREGGREGAV*DTSLSFSVTCG Trigger: GCCACATGTCACTGAAAAGGACAACGAAGTATCTCACACTGCTCCCTCCCTCCCTCCCTCCCTCCCTCCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
||
| 3UTR GCA 72 bp | TGGGACAAATGGGTGCACCACAGAGTAAGTTCGGCTTaGCACAAGCCCAGCAGCCTCAGTGGAACCTCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: WDKWVHHRVSSA*HKPSSLSGTSH Trigger: GTGAGAGGTTCCACTGAGGCTGCTGGGCTTGTGGCAAGCCGAACTTACTCTGTGGTGCACCCATTTGTCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
||
| 3UTR GCA 72 bp | ACCTCAGCTCCTACCTGTCAGGCTTGGTGCCAGCCATaGTTACTTGGCTCCTGGGTGGGATCTCTTCATAGT | + |
|
Preference number: 3 (lower is better) Translates to: TSAPTCQAWCQP*LLGSWVGSLHS Trigger: ACTATGAAGAGATCCCACCCAGGAGCCAAGTAAGCATGGCTGGCACCAAGCCTGACAGGTAGGAGCTGAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
||
| 3UTR CCA 72 bp | CATCTAAGACATACCTCAGCTCCTACCTGTCAGGCTTaGTGCCAGCCATGCTTACTTGGCTCCTGGGTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: HLRHTSAPTCQA*CQPCLLGSWVG Trigger: TCCCACCCAGGAGCCAAGTAAGCATGGCTGGCACCAAGCCTGACAGGTAGGAGCTGAGGTATGTCTTAGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
||
| 3UTR CCA 72 bp | ATGTTGTTGGCCCTCAGGGAGGAATGGTGGGACAAATaGGTGCACCACAGAGTAAGTTCGGCTTGCCACAAG | + |
|
Preference number: 3 (lower is better) Translates to: MLLALREEWWDK*VHHRVSSACHK Trigger: CTTGTGGCAAGCCGAACTTACTCTGTGGTGCACCCATTTGTCCCACCATTCCTCCCTGAGGGCCAACAACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
||
| 3UTR CCA 72 bp | GCCCATGCACAATGGGTTCATGGGAAACGCACAGACTaGAGTGATGCCACTTCCTCAGAATGTTGTTGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: AHAQWVHGKRTD*SDATSSECCWP Trigger: GGGCCAACAACATTCTGAGGAAGTGGCATCACTCCAGTCTGTGCGTTTCCCATGAACCCATTGTGCATGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
||
| 3UTR CCA 72 bp | GAATACTGGCATGATGGTGGGCATGCCCATGCACAATaGGTTCATGGGAAACGCACAGACTGGAGTGATGCC | + |
|
Preference number: 3 (lower is better) Translates to: EYWHDGGHAHAQ*VHGKRTDWSDA Trigger: GGCATCACTCCAGTCTGTGCGTTTCCCATGAACCCATTGTGCATGGGCATGCCCACCATCATGCCAGTATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
||
| 3UTR TCA 72 bp | GCTGCCGCTGTCATGTGGTTACTGCCTGTTGATGTATaGGGAACATCCATTGGCTCAGGAATCCCCATGGTG | + |
|
Preference number: 3 (lower is better) Translates to: AAAVMWLLPVDV*GTSIGSGIPMV Trigger: CACCATGGGGATTCCTGAGCCAATGGATGTTCCTCATACATCAACAGGCAGTAACCACATGACAGCGGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
||
| 3UTR TCA 72 bp | TGCACAATGGGTTCATGGGAAACGCACAGACTGGAGTaGTGCCACTTCCTCAGAATGTTGTTGGCCCTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: CTMGSWETHRLE*CHFLRMLLALR Trigger: CCTGAGGGCCAACAACATTCTGAGGAAGTGGCATCACTCCAGTCTGTGCGTTTCCCATGAACCCATTGTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
||
| 3UTR CCA 72 bp | TGTCAGGCTTGGTGCCAGCCATGCTTACTTGGCTCCTaGGTGGGATCTCTTCATAGTTCACTTAGACCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: CQAWCQPCLLGS*VGSLHSSLRPE Trigger: CTCTGGTCTAAGTGAACTATGAAGAGATCCCACCCAGGAGCCAAGTAAGCATGGCTGGCACCAAGCCTGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
||
| 3UTR CCA 72 bp | TTCCTCAGAATGTTGTTGGCCCTCAGGGAGGAATGGTaGGACAAATGGGTGCACCACAGAGTAAGTTCGGCT | + |
|
Preference number: 3 (lower is better) Translates to: FLRMLLALREEW*DKWVHHRVSSA Trigger: AGCCGAACTTACTCTGTGGTGCACCCATTTGTCCCACCATTCCTCCCTGAGGGCCAACAACATTCTGAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
||
| 3UTR CCA 72 bp | CACTTCCTCAGAATGTTGTTGGCCCTCAGGGAGGAATaGTGGGACAAATGGGTGCACCACAGAGTAAGTTCG | + |
|
Preference number: 3 (lower is better) Translates to: HFLRMLLALREE*WDKWVHHRVSS Trigger: CGAACTTACTCTGTGGTGCACCCATTTGTCCCACCATTCCTCCCTGAGGGCCAACAACATTCTGAGGAAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
||
| 3UTR TCA 72 bp | CATCTGTGTGGAGGGCAGCTTTGCTCATACTCCCCATaGTGTCCTAAGCCACATTGGGAAGCTGCTCAGTTA | + |
|
Preference number: 3 (lower is better) Translates to: HLCGGQLCSYSP*CPKPHWEAAQL Trigger: TAACTGAGCAGCTTCCCAATGTGGCTTAGGACATCATGGGGAGTATGAGCAAAGCTGCCCTCCACACAGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
||
| 3UTR CCA 72 bp | AGGCTTGGTGCCAGCCATGCTTACTTGGCTCCTGGGTaGGATCTCTTCATAGTTCACTTAGACCAGAGTATC | + |
|
Preference number: 3 (lower is better) Translates to: RLGASHAYLAPG*DLFIVHLDQSI Trigger: GATACTCTGGTCTAAGTGAACTATGAAGAGATCCCACCCAGGAGCCAAGTAAGCATGGCTGGCACCAAGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
||
| 3UTR GCA 72 bp | TATGAGGGATCAAGGCTGCCGCTGTCATGTGGTTACTaGCTGTTGATGTATGAGGAACATCCATTGGCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: YEGSRLPLSCGY*LLMYEEHPLAQ Trigger: CTGAGCCAATGGATGTTCCTCATACATCAACAGGCAGTAACCACATGACAGCGGCAGCCTTGATCCCTCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
||
| 3UTR GCA 72 bp | ATTTCAAGGTTTTCCTTCCATGGGCGTCCCAGTGCCTaGAGCTCCCGGTCTTATAGGAAATATGATGGGACA | + |
|
Preference number: 3 (lower is better) Translates to: ISRFSFHGRPSA*SSRSYRKYDGT Trigger: TGTCCCATCATATTTCCTATAAGACCGGGAGCTGCAGGCACTGGGACGCCCATGGAAGGAAAACCTTGAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
||
| 3UTR-3UTR CAA 90 bp | CCTTTCTCCGGAGAGGAGTGCAGCCATATAAAGAGCCTCTTCTTGACCTGTTCTGGATGTGAAAGCAGGTaGAGAAACCATCTGTGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: PFSGEECSHIKSLFLTCSGCESR*RNHLCG Trigger: TCCACACAGATGGTTTCTCAACCTGCTTTCACATCC...AGAACAGGTCAAGAAGAGGCTCTTTATATGGCTGCACTCCTCTCCGGAGAAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
||
| 3UTR CCA 72 bp | TCCCGGTCTTATAGGAAATATGATGGGACAGAATACTaGCATGATGGTGGGCATGCCCATGCACAATGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: SRSYRKYDGTEY*HDGGHAHAQWV Trigger: AACCCATTGTGCATGGGCATGCCCACCATCATGCCAGTATTCTGTCCCATCATATTTCCTATAAGACCGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
||
| 3UTR CCA 72 bp | CTCTTCATAAAACAAAGAACCACTTCTCTCCCTGCCTaGTTGGGTTTTGTGAGAGCAGTGGTACCAGTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: LFIKQRTTSLPA*LGFVRAVVPVS Trigger: GCTGACTGGTACCACTGCTCTCACAAAACCCAACCAGGCAGGGAGAGAAGTGGTTCTTTGTTTTATGAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
||
| 3UTR GCA 72 bp | CTACCTCTTCATAAAACAAAGAACCACTTCTCTCCCTaGCTGGTTGGGTTTTGTGAGAGCAGTGGTACCAGT | + |
|
Preference number: 3 (lower is better) Translates to: LPLHKTKNHFSP*LVGFCESSGTS Trigger: ACTGGTACCACTGCTCTCACAAAACCCAACCAGGCAGGGAGAGAAGTGGTTCTTTGTTTTATGAAGAGGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
||
| 3UTR-3UTR CAA 90 bp | CCTTTCTCCGGAGAGGAGTGCAGCCATATAAAGAGCCTCTTCTTGACCTGTTCTTGTAAACCAAGCCTTTaGTGTTTCGCAGATGAATCA | + |
|
Preference number: 3 (lower is better) Translates to: PFSGEECSHIKSLFLTCSCKPSL*CFADES Trigger: TGATTCATCTGCGAAACACAAAAGGCTTGGTTTACA...AGAACAGGTCAAGAAGAGGCTCTTTATATGGCTGCACTCCTCTCCGGAGAAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
||
| 3UTR TCA 72 bp | AGGGAGCAGTGTGAGATACTTCGTTGTCCTTTTCAGTaGCATGTGGCTTCACTCTACAAAACTCTTCCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: REQCEILRCPFQ*HVASLYKTLPV Trigger: AACTGGAAGAGTTTTGTAGAGTGAAGCCACATGTCACTGAAAAGGACAACGAAGTATCTCACACTGCTCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
||
| 3UTR TCA 72 bp | AGAATCACCGTGTATCTTACAAATGCTCGTGTGCTGTaGCAGCTGCGGTTTATAGGTATATACGTACACACT | + |
|
Preference number: 3 (lower is better) Translates to: RITVYLTNARVL*QLRFIGIYVHT Trigger: AGTGTGTACGTATATACCTATAAACCGCAGCTGTCACAGCACACGAGCATTTGTAAGATACACGGTGATTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
||
| 3UTR GCA 72 bp | GTTGAACATAGGTTTGAAACTATTTTAGGTAAATCCTaGATCTCTTGTTCCGTCACCAAACTGGGTAGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: VEHRFETILGKS*ISCSVTKLGSG Trigger: CCCACTACCCAGTTTGGTGACGGAACAAGAGATGCAGGATTTACCTAAAATAGTTTCAAACCTATGTTCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
||
| 3UTR TCA 72 bp | AACGGAGATAAACCTGGATGCTACTGTAAAACTCAATaGAGGTTTCAGAATTCAAATTTCCATTGCCTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: NGDKPGCYCKTQ*RFQNSNFHCLL Trigger: CAAGAGGCAATGGAAATTTGAATTCTGAAACCTTCATTGAGTTTTACAGTAGCATCCAGGTTTATCTCCGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
||
| CDS-3UTR GCA 90 bp | GCAGTATTGAGATGGCTTGTGGGAGGGAGGGATGGAGGGAGGGAGGGAGGGAGGCGCGGCGTGGGCACATaGAGGTGCGTGTTGGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AVLRWLVGGRDGGREGGRRGVGT*RCVLGR Trigger: CCTGCCCAACACGCACCTGCATGTGCCCACGCCGCG...CCTCCCTCCCTCCCTCCCTCCATCCCTCCCTCCCACAAGCCATCTCAATACTGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
||
| CDS-3UTR CCA 90 bp | GCAGTATTGAGATGGCTTGTGGGAGGGAGGGATGGAGGGAGGGAGGGAGGGAGGTGTAGCGCCGCGGCGTaGGCACATGCAGGTGCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: AVLRWLVGGRDGGREGGRCSAAA*AHAGAC Trigger: ACACGCACCTGCATGTGCCCACGCCGCGGCGCTACA...CCTCCCTCCCTCCCTCCCTCCATCCCTCCCTCCCACAAGCCATCTCAATACTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
||
| CDS-3UTR GCA 90 bp | ACTGGCATGATGGTGGGCATGCCCATGCACAATGGGTTCATGGGAAACGCACAGAGGCGAGGCCCGCGTTaGGCTGTTCGGTGGCGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: TGMMVGMPMHNGFMGNAQRRGPR*AVRWRA Trigger: CGCGCGCCACCGAACAGCGCAACGCGGGCCTCGCCT...CTGTGCGTTTCCCATGAACCCATTGTGCATGGGCATGCCCACCATCATGCCAGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
||
| CDS-3UTR TCA 90 bp | ACTGGCATGATGGTGGGCATGCCCATGCACAATGGGTTCATGGGAAACGCACAGAGTAGGGACGGGAAGTaGGTTGGGGCGCGGGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TGMMVGMPMHNGFMGNAQSRDGK*VGARAC Trigger: GCAGGCCCGCGCCCCAACTCACTTCCCGTCCCTACT...CTGTGCGTTTCCCATGAACCCATTGTGCATGGGCATGCCCACCATCATGCCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
||
| CDS-3UTR GCA 90 bp | ACTGGCATGATGGTGGGCATGCCCATGCACAATGGGTTCATGGGAAACGCACAGTGCTCACCAGCTCGCTaGGCGTCGCCCGGTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TGMMVGMPMHNGFMGNAQCSPAR*ASPGPP Trigger: TGGAGGACCGGGCGACGCGCAGCGAGCTGGTGAGCA...CTGTGCGTTTCCCATGAACCCATTGTGCATGGGCATGCCCACCATCATGCCAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
||
| CDS-3UTR GCA 90 bp | AGACTACACAGAGGTGGGAGCTATGGTTCCATTATCTCTAAACCCCATATGCCCAGGCGAGGCCCGCGTTaGGCTGTTCGGTGGCGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: RLHRGGSYGSIISKPHMPRRGPR*AVRWRA Trigger: CGCGCGCCACCGAACAGCGCAACGCGGGCCTCGCCT...GGGCATATGGGGTTTAGAGATAATGGAACCATAGCTCCCACCTCTGTGTAGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140583.2 |
||
| CDS-3UTR GCA 90 bp | TGCGTCTGTCTGTGTCCTGGAGTAACAGCTCTGAAGGTTGAGGCATGGGTTGTTGCCCCCGCAGCCCACTaGATGGGGAGAGAAGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: CVCLCPGVTALKVEAWVVAPAAH*MGREVG Trigger: CCCTACTTCTCTCCCCATGCAGTGGGCTGCGGGGGC...AACAACCCATGCCTCAACCTTCAGAGCTGTTACTCCAGGACACAGACAGACGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
||
| CDS-3UTR GCA 90 bp | AGTAAGTTCGGCTTGCCACAAGCCCAGCAGCCTCAGTGGAACCTCTCACAGGTAAGGATCCAGTGCAACTaGGCCACCTGGCGGAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SKFGLPQAQQPQWNLSQVRIQCN*ATWRKV Trigger: CACCTTCCGCCAGGTGGCGCAGTTGCACTGGATCCT...TACCTGTGAGAGGTTCCACTGAGGCTGCTGGGCTTGTGGCAAGCCGAACTTACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
||
| CDS-3UTR GCA 90 bp | GAAAGCAGGTTGAGAAACCATCTGTGTGGAGGGCAGCTTTGCTCATACTCCCCACCCGAGCTAGGAAGCTaGTCACCAGCTCGCTGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: ESRLRNHLCGGQLCSYSPPELGS*SPARCA Trigger: CGCGCAGCGAGCTGGTGAGCAGCTTCCTAGCTCGGG...TGGGGAGTATGAGCAAAGCTGCCCTCCACACAGATGGTTTCTCAACCTGCTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
||
| CDS-3UTR TCA 90 bp | AGACTACACAGAGGTGGGAGCTATGGTTCCATTATCTCTAAACCCCATATGCCCAGTAGGGACGGGAAGTaGGTTGGGGCGCGGGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RLHRGGSYGSIISKPHMPSRDGK*VGARAC Trigger: GCAGGCCCGCGCCCCAACTCACTTCCCGTCCCTACT...GGGCATATGGGGTTTAGAGATAATGGAACCATAGCTCCCACCTCTGTGTAGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140583.2 |
||
| CDS-3UTR CCA 90 bp | GCTAATAGACTACACAGAGGTGGGAGCTATGGTTCCATTATCTCTAAACCCCATGGACGGGAAGTGAGTTaGGGCGCGGGCCTGCGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ANRLHRGGSYGSIISKPHGREVS*GAGLRG Trigger: CCCCCGCAGGCCCGCGCCCCAACTCACTTCCCGTCC...ATGGGGTTTAGAGATAATGGAACCATAGCTCCCACCTCTGTGTAGTCTATTAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140583.2 |
||
| 3UTR CAA 72 bp | GTGGGACAAATGGGTGCACCACAGAGTAAGTTCGGCTaGCCACAAGCCCAGCAGCCTCAGTGGAACCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VGQMGAPQSKFG*PQAQQPQWNLS Trigger: TGAGAGGTTCCACTGAGGCTGCTGGGCTTGTGGCAAGCCGAACTTACTCTGTGGTGCACCCATTTGTCCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
||
| CDS-3UTR GCA 90 bp | AGACTACACAGAGGTGGGAGCTATGGTTCCATTATCTCTAAACCCCATATGCCCGCCCCCGCAGCCCACTaGATGGGGAGAGAAGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RLHRGGSYGSIISKPHMPAPAAH*MGREVG Trigger: CCCTACTTCTCTCCCCATGCAGTGGGCTGCGGGGGC...GGGCATATGGGGTTTAGAGATAATGGAACCATAGCTCCCACCTCTGTGTAGTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000140583.2 |
||
| CDS-3UTR CCA 90 bp | GTGACAGCTGCGGTTTATAGGTATATACGTACACACTGCTTATGCATTGGAAACGGACGGGAAGTGAGTTaGGGCGCGGGCCTGCGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VTAAVYRYIRTHCLCIGNGREVS*GAGLRG Trigger: CCCCCGCAGGCCCGCGCCCCAACTCACTTCCCGTCC...GTTTCCAATGCATAAGCAGTGTGTACGTATATACCTATAAACCGCAGCTGTCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
||
| CDS-3UTR CCA 90 bp | ATAGACTACACAGAGGTGGGAGCTATGGTTCCATTATCTCTAAACCCCATATGCCGTTGCGCTGTTCGGTaGCGCGCGGCAGCCACGGTC | + |
|
Preference number: 4 (lower is better) Translates to: IDYTEVGAMVPLSLNPICRCAVR*RAAATV Trigger: GACCGTGGCTGCCGCGCGCCACCGAACAGCGCAACG...GCATATGGGGTTTAGAGATAATGGAACCATAGCTCCCACCTCTGTGTAGTCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140583.2 |
||
| CDS-3UTR TCA 90 bp | AGACTACACAGAGGTGGGAGCTATGGTTCCATTATCTCTAAACCCCATATGCCCTCCAGGGCAGGAGGATaGAGAAGCGGCTGCACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: RLHRGGSYGSIISKPHMPSRAGG*RSGCTA Trigger: CGCTGTGCAGCCGCTTCTTCATCCTCCTGCCCTGGA...GGGCATATGGGGTTTAGAGATAATGGAACCATAGCTCCCACCTCTGTGTAGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140583.2 |
||
| CDS-3UTR TCA 90 bp | GTGACAGCTGCGGTTTATAGGTATATACGTACACACTGCTTATGCATTGGAAACGGCTCCGGCTGCAGCTaGGGCCGAGACTCGTTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: VTAAVYRYIRTHCLCIGNGSGCS*GRDSFR Trigger: GCGGAACGAGTCTCGGCCTCAGCTGCAGCCGGAGCC...GTTTCCAATGCATAAGCAGTGTGTACGTATATACCTATAAACCGCAGCTGTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
||
| CDS-3UTR TCA 90 bp | AGACTACACAGAGGTGGGAGCTATGGTTCCATTATCTCTAAACCCCATATGCCCTGTTGGCCAGGCGAGTaGGCTCGGCTTTCTGCACCG | + |
|
Preference number: 4 (lower is better) Translates to: RLHRGGSYGSIISKPHMPCWPGE*ARLSAP Trigger: CGGTGCAGAAAGCCGAGCTCACTCGCCTGGCCAACA...GGGCATATGGGGTTTAGAGATAATGGAACCATAGCTCCCACCTCTGTGTAGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140583.2 |
||
| CDS-3UTR GCA 90 bp | ATAGACTACACAGAGGTGGGAGCTATGGTTCCATTATCTCTAAACCCCATATGCTGCTCACCAGCTCGCTaGGCGTCGCCCGGTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IDYTEVGAMVPLSLNPICCSPAR*ASPGPP Trigger: TGGAGGACCGGGCGACGCGCAGCGAGCTGGTGAGCA...GCATATGGGGTTTAGAGATAATGGAACCATAGCTCCCACCTCTGTGTAGTCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140583.2 |
||
| CDS-3UTR GCA 90 bp | GCTAATAGACTACACAGAGGTGGGAGCTATGGTTCCATTATCTCTAAACCCCATCGCGGCGTGGGCACATaGAGGTGCGTGTTGGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ANRLHRGGSYGSIISKPHRGVGT*RCVLGR Trigger: CCTGCCCAACACGCACCTGCATGTGCCCACGCCGCG...ATGGGGTTTAGAGATAATGGAACCATAGCTCCCACCTCTGTGTAGTCTATTAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140583.2 |
||
| CDS-3UTR CCA 90 bp | AGACTACACAGAGGTGGGAGCTATGGTTCCATTATCTCTAAACCCCATATGCCCTGCAACTGCGCCACCTaGCGGAAGGTGTTGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RLHRGGSYGSIISKPHMPCNCAT*RKVLAR Trigger: CCTGGCCAACACCTTCCGCCAGGTGGCGCAGTTGCA...GGGCATATGGGGTTTAGAGATAATGGAACCATAGCTCCCACCTCTGTGTAGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140583.2 |
||
| CDS-3UTR CCA 90 bp | GTGACAGCTGCGGTTTATAGGTATATACGTACACACTGCTTATGCATTGGAAACCGTTGCGCTGTTCGGTaGCGCGCGGCAGCCACGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VTAAVYRYIRTHCLCIGNRCAVR*RAAATV Trigger: GACCGTGGCTGCCGCGCGCCACCGAACAGCGCAACG...GTTTCCAATGCATAAGCAGTGTGTACGTATATACCTATAAACCGCAGCTGTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
||
| CDS-3UTR CCA 90 bp | AAGGAAAGGCTGAAGGCAAAGGAACAGTACCTGAATGGGCAGCAGCCCACGCTCTCTTGCATCCCTGGCTaGGATCCACGGCGCTTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: KERLKAKEQYLNGQQPTLSCIPG*DPRRLN Trigger: ATTTAAGCGCCGTGGATCCCAGCCAGGGATGCAAGA...GAGCGTGGGCTGCTGCCCATTCAGGTACTGTTCCTTTGCCTTCAGCCTTTCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
||
| CDS-3UTR TCA 90 bp | GTGAGCAGAAGGGAAGATGGAAGCTACCTGTCTGTAGACACATGTGTGCTTATTTCCAGGGCAGGAGGATaGAGAAGCGGCTGCACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: VSRREDGSYLSVDTCVLISRAGG*RSGCTA Trigger: CGCTGTGCAGCCGCTTCTTCATCCTCCTGCCCTGGA...AATAAGCACACATGTGTCTACAGACAGGTAGCTTCCATCTTCCCTTCTGCTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
||
| CDS-3UTR TCA 90 bp | GTGAGCAGAAGGGAAGATGGAAGCTACCTGTCTGTAGACACATGTGTGCTTATTTGTTGGCCAGGCGAGTaGGCTCGGCTTTCTGCACCG | + |
|
Preference number: 4 (lower is better) Translates to: VSRREDGSYLSVDTCVLICWPGE*ARLSAP Trigger: CGGTGCAGAAAGCCGAGCTCACTCGCCTGGCCAACA...AATAAGCACACATGTGTCTACAGACAGGTAGCTTCCATCTTCCCTTCTGCTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
||
| CDS-3UTR GCA 90 bp | GCTAATAGACTACACAGAGGTGGGAGCTATGGTTCCATTATCTCTAAACCCCATCCCGAGCTAGGAAGCTaGTCACCAGCTCGCTGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: ANRLHRGGSYGSIISKPHPELGS*SPARCA Trigger: CGCGCAGCGAGCTGGTGAGCAGCTTCCTAGCTCGGG...ATGGGGTTTAGAGATAATGGAACCATAGCTCCCACCTCTGTGTAGTCTATTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140583.2 |
||
| 3UTR CAA 72 bp | CTCCTACCTGTCAGGCTTGGTGCCAGCCATGCTTACTaGGCTCCTGGGTGGGATCTCTTCATAGTTCACTTA | + |
|
Preference number: 4 (lower is better) Translates to: LLPVRLGASHAY*APGWDLFIVHL Trigger: TAAGTGAACTATGAAGAGATCCCACCCAGGAGCCAAGTAAGCATGGCTGGCACCAAGCCTGACAGGTAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| CDS-3UTR GCA 90 bp | TGCGTCTGTCTGTGTCCTGGAGTAACAGCTCTGAAGGTTGAGGCATGGGTTGTTTTCTCTGTCCGAGTGTaGCACACGAGAACCTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: CVCLCPGVTALKVEAWVVFSVRV*HTRTLV Trigger: CACCAAGGTTCTCGTGTGGCACACTCGGACAGAGAA...AACAACCCATGCCTCAACCTTCAGAGCTGTTACTCCAGGACACAGACAGACGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| CDS-3UTR CCA 90 bp | GAAAGCAGGTTGAGAAACCATCTGTGTGGAGGGCAGCTTTGCTCATACTCCCCAGTGGTCCTCATCTCCTaGAAGAGCTCCAGACTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: ESRLRNHLCGGQLCSYSPVVLIS*KSSRLY Trigger: GTACAGTCTGGAGCTCTTCCAGGAGATGAGGACCAC...TGGGGAGTATGAGCAAAGCTGCCCTCCACACAGATGGTTTCTCAACCTGCTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
||
| CDS-3UTR GCA 90 bp | GCTAATAGACTACACAGAGGTGGGAGCTATGGTTCCATTATCTCTAAACCCCATAGGATCCAGTGCAACTaGGCCACCTGGCGGAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ANRLHRGGSYGSIISKPHRIQCN*ATWRKV Trigger: CACCTTCCGCCAGGTGGCGCAGTTGCACTGGATCCT...ATGGGGTTTAGAGATAATGGAACCATAGCTCCCACCTCTGTGTAGTCTATTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140583.2 |
||
| CDS-3UTR TCA 90 bp | GAAAGCAGGTTGAGAAACCATCTGTGTGGAGGGCAGCTTTGCTCATACTCCCCATCGGATTGGACAAGATaGCTTGCAGACTCACAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: ESRLRNHLCGGQLCSYSPSDWTR*LADSQQ Trigger: TTGCTGTGAGTCTGCAAGTCATCTTGTCCAATCCGA...TGGGGAGTATGAGCAAAGCTGCCCTCCACACAGATGGTTTCTCAACCTGCTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
||
| CDS-3UTR TCA 90 bp | CCTTTCTCCGGAGAGGAGTGCAGCCATATAAAGAGCCTCTTCTTGACCTGTTCTGCTCATTGGCTAGATTaGCCTTCTCTGTCCGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PFSGEECSHIKSLFLTCSAHWLD*PSLSEC Trigger: ACACTCGGACAGAGAAGGTCAATCTAGCCAATGAGC...AGAACAGGTCAAGAAGAGGCTCTTTATATGGCTGCACTCCTCTCCGGAGAAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
||
| CDS-3UTR CCA 90 bp | GTGAGCAGAAGGGAAGATGGAAGCTACCTGTCTGTAGACACATGTGTGCTTATTAGATTCTTGCATCCCTaGCTGGGATCCACGGCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VSRREDGSYLSVDTCVLIRFLHP*LGSTAL Trigger: AAGCGCCGTGGATCCCAGCCAGGGATGCAAGAATCT...AATAAGCACACATGTGTCTACAGACAGGTAGCTTCCATCTTCCCTTCTGCTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
||
| CDS-3UTR TCA 90 bp | ATAGACTACACAGAGGTGGGAGCTATGGTTCCATTATCTCTAAACCCCATATGCGACTGTAGGTGGGTGTaGTGGCATAGATGGTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: IDYTEVGAMVPLSLNPICDCRWV*WHRWWA Trigger: TGCCCACCATCTATGCCATCACACCCACCTACAGTC...GCATATGGGGTTTAGAGATAATGGAACCATAGCTCCCACCTCTGTGTAGTCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140583.2 |
||
| CDS-3UTR GCA 90 bp | GTTTTACTTTCTAAAATGTCTCAGTCTTGGAGTCACAGAAGAGTGATGGTCTCATCCACCAGGATCCAGTaGAACTGCGCCACCTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: VLLSKMSQSWSHRRVMVSSTRIQ*NCATWR Trigger: CCGCCAGGTGGCGCAGTTGCACTGGATCCTGGTGGA...TGAGACCATCACTCTTCTGTGACTCCAAGACTGAGACATTTTAGAAAGTAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
||
| CDS-3UTR GCA 90 bp | AAGAACAGCAAGGCCACAAGAGTGAGCAGAAGGGAAGATGGAAGCTACCTGTCTAGAAAGTCAGATTCTTaGATCCCTGGCTGGGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: KNSKATRVSRREDGSYLSRKSDS*IPGWDP Trigger: TGGATCCCAGCCAGGGATGCAAGAATCTGACTTTCT...AGACAGGTAGCTTCCATCTTCCCTTCTGCTCACTCTTGTGGCCTTGCTGTTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
||
| CDS-3UTR GCA 90 bp | AGACTACACAGAGGTGGGAGCTATGGTTCCATTATCTCTAAACCCCATATGCCCGGGACAAATGTCCCATaGATTCTGCTCACCAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RLHRGGSYGSIISKPHMPGTNVP*ILLTSH Trigger: ATGGCTGGTGAGCAGAATGCATGGGACATTTGTCCC...GGGCATATGGGGTTTAGAGATAATGGAACCATAGCTCCCACCTCTGTGTAGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140583.2 ENSMUST00000144602.2 |
||
| CDS-3UTR CCA 90 bp | GTTTTACTTTCTAAAATGTCTCAGTCTTGGAGTCACAGAAGAGTGATGGTCTCATGCAACTGCGCCACCTaGCGGAAGGTGTTGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VLLSKMSQSWSHRRVMVSCNCAT*RKVLAR Trigger: CCTGGCCAACACCTTCCGCCAGGTGGCGCAGTTGCA...TGAGACCATCACTCTTCTGTGACTCCAAGACTGAGACATTTTAGAAAGTAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| CDS-3UTR TCA 90 bp | GTGACAGCTGCGGTTTATAGGTATATACGTACACACTGCTTATGCATTGGAAACGACTGTAGGTGGGTGTaGTGGCATAGATGGTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VTAAVYRYIRTHCLCIGNDCRWV*WHRWWA Trigger: TGCCCACCATCTATGCCATCACACCCACCTACAGTC...GTTTCCAATGCATAAGCAGTGTGTACGTATATACCTATAAACCGCAGCTGTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
||
| CDS-3UTR CCA 90 bp | ATAGACTACACAGAGGTGGGAGCTATGGTTCCATTATCTCTAAACCCCATATGCGTGGTCCTCATCTCCTaGAAGAGCTCCAGACTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: IDYTEVGAMVPLSLNPICVVLIS*KSSRLY Trigger: GTACAGTCTGGAGCTCTTCCAGGAGATGAGGACCAC...GCATATGGGGTTTAGAGATAATGGAACCATAGCTCCCACCTCTGTGTAGTCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140583.2 |
||
| CDS-3UTR CCA 90 bp | GAAAGCAGGTTGAGAAACCATCTGTGTGGAGGGCAGCTTTGCTCATACTCCCCAGCAGTTACTAGCTTTTaGTTCCAGTTCTTCAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: ESRLRNHLCGGQLCSYSPAVTSF*FQFFNC Trigger: ACAGTTGAAGAACTGGAACCAAAAGCTAGTAACTGC...TGGGGAGTATGAGCAAAGCTGCCCTCCACACAGATGGTTTCTCAACCTGCTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| 3UTR CAA 72 bp | TTCATAAAACAAAGAACCACTTCTCTCCCTGCCTGGTaGGGTTTTGTGAGAGCAGTGGTACCAGTCAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: FIKQRTTSLPAW*GFVRAVVPVSK Trigger: CTTGCTGACTGGTACCACTGCTCTCACAAAACCCAACCAGGCAGGGAGAGAAGTGGTTCTTTGTTTTATGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
||
| CDS-3UTR TCA 90 bp | GTGACAGCTGCGGTTTATAGGTATATACGTACACACTGCTTATGCATTGGAAACTTCACTGTGTCCAGGTaGTACTTTGGCTCATTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VTAAVYRYIRTHCLCIGNFTVSR*YFGSLA Trigger: AGCCAATGAGCCAAAGTATCACCTGGACACAGTGAA...GTTTCCAATGCATAAGCAGTGTGTACGTATATACCTATAAACCGCAGCTGTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| 3UTR CAA 72 bp | CGGTTTATAGGTATATACGTACACACTGCTTATGCATaGGAAACCTCGGGAATGATGTCAGATACTAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RFIGIYVHTAYA*ETSGMMSDTRN Trigger: GTTCCTAGTATCTGACATCATTCCCGAGGTTTCCAATGCATAAGCAGTGTGTACGTATATACCTATAAACCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| CDS-3UTR TCA 90 bp | GCTAATAGACTACACAGAGGTGGGAGCTATGGTTCCATTATCTCTAAACCCCATCACTTAAGGGTTTTATaGAAATTGGTCTTTCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ANRLHRGGSYGSIISKPHHLRVL*KLVFPS Trigger: ACTGGGAAAGACCAATTTTCATAAAACCCTTAAGTG...ATGGGGTTTAGAGATAATGGAACCATAGCTCCCACCTCTGTGTAGTCTATTAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000140583.2 ENSMUST00000144602.2 |
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| CDS-3UTR TCA 90 bp | CTAATAGACTACACAGAGGTGGGAGCTATGGTTCCATTATCTCTAAACCCCATACACTTAAGGGTTTTATaGAAATTGGTCTTTCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LIDYTEVGAMVPLSLNPIHLRVL*KLVFPS Trigger: ACTGGGAAAGACCAATTTTCATAAAACCCTTAAGTG...TATGGGGTTTAGAGATAATGGAACCATAGCTCCCACCTCTGTGTAGTCTATTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000140583.2 ENSMUST00000144602.2 |
||
| CDS CCA 90 bp | GATGCCTCTGGCGCAGCCAGGCGAGGCCCGCGTTGCGCTGTTCGGTaGCGCGCGGCAGCCACGGTCGCTTGTAGCGCCGCGGCGTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: DASGAARRGPRCAVR*RAAATVACSAAAWA Trigger: TGCCCACGCCGCGGCGCTACAAGCGACCGTGGCTGCCGCGCGCCACCGAACAGCGCAACGCGGGCCTCGCCTGGCTGCGCCAGAGGCATC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063663.6 ENSMUST00000140583.2 |
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| CDS GCA 90 bp | CGCTCTGATGCTGATGCCTCTGGCGCAGCCAGGCGAGGCCCGCGTTaGGCTGTTCGGTGGCGCGCGGCAGCCACGGTCGCTTGTAGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: RSDADASGAARRGPR*AVRWRAAATVACSA Trigger: GGCGCTACAAGCGACCGTGGCTGCCGCGCGCCACCGAACAGCGCAACGCGGGCCTCGCCTGGCTGCGCCAGAGGCATCAGCATCAGAGCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063663.6 ENSMUST00000140583.2 |
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| CDS GCA 90 bp | GCACATGCAGGTGCGTGTTGGGCAGGCCGGCCCGAGCTAGGAAGCTaGTCACCAGCTCGCTGCGCGTCGCCCGGTCCTCCACCAGGATCC | + |
|
Preference number: 5 (lower is better) Translates to: AHAGACWAGRPELGS*SPARCASPGPPPGS Trigger: GGATCCTGGTGGAGGACCGGGCGACGCGCAGCGAGCTGGTGAGCAGCTTCCTAGCTCGGGCCGGCCTGCCCAACACGCACCTGCATGTGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063663.6 ENSMUST00000140583.2 |
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| CDS CCA 90 bp | ACGGTCGCTTGTAGCGCCGCGGCGTGGGCACATGCAGGTGCGTGTTaGGCAGGCCGGCCCGAGCTAGGAAGCTGCTCACCAGCTCGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TVACSAAAWAHAGAC*AGRPELGSCSPARC Trigger: GCAGCGAGCTGGTGAGCAGCTTCCTAGCTCGGGCCGGCCTGCCCAACACGCACCTGCATGTGCCCACGCCGCGGCGCTACAAGCGACCGT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063663.6 ENSMUST00000140583.2 |
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| CDS GCA 90 bp | AGCTCGCTGCGCGTCGCCCGGTCCTCCACCAGGATCCAGTGCAACTaGGCCACCTGGCGGAAGGTGTTGGCCAGGCGAGTGAGCTCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SSLRVARSSTRIQCN*ATWRKVLARRVSSA Trigger: AGCCGAGCTCACTCGCCTGGCCAACACCTTCCGCCAGGTGGCGCAGTTGCACTGGATCCTGGTGGAGGACCGGGCGACGCGCAGCGAGCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063663.6 ENSMUST00000140583.2 |
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| CDS GCA 90 bp | CTCACCAGCTCGCTGCGCGTCGCCCGGTCCTCCACCAGGATCCAGTaGAACTGCGCCACCTGGCGGAAGGTGTTGGCCAGGCGAGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LTSSLRVARSSTRIQ*NCATWRKVLARRVS Trigger: GCTCACTCGCCTGGCCAACACCTTCCGCCAGGTGGCGCAGTTGCACTGGATCCTGGTGGAGGACCGGGCGACGCGCAGCGAGCTGGTGAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063663.6 ENSMUST00000140583.2 |
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| CDS GCA 90 bp | TGTTGGGCAGGCCGGCCCGAGCTAGGAAGCTGCTCACCAGCTCGCTaGGCGTCGCCCGGTCCTCCACCAGGATCCAGTGCAACTGCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: CWAGRPELGSCSPAR*ASPGPPPGSSATAP Trigger: TGGCGCAGTTGCACTGGATCCTGGTGGAGGACCGGGCGACGCGCAGCGAGCTGGTGAGCAGCTTCCTAGCTCGGGCCGGCCTGCCCAACA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063663.6 ENSMUST00000140583.2 |
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| CDS CCA 90 bp | CGCGTCGCCCGGTCCTCCACCAGGATCCAGTGCAACTGCGCCACCTaGCGGAAGGTGTTGGCCAGGCGAGTGAGCTCGGCTTTCTGCACC | + |
|
Preference number: 5 (lower is better) Translates to: RVARSSTRIQCNCAT*RKVLARRVSSAFCT Trigger: GGTGCAGAAAGCCGAGCTCACTCGCCTGGCCAACACCTTCCGCCAGGTGGCGCAGTTGCACTGGATCCTGGTGGAGGACCGGGCGACGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063663.6 ENSMUST00000140583.2 |
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| CDS-3UTR CAA 90 bp | ACTGGCATGATGGTGGGCATGCCCATGCACAATGGGTTCATGGGAAACGCACAGGGGACGGGAAGTGAGTaGGGGCGCGGGCCTGCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: TGMMVGMPMHNGFMGNAQGTGSE*GRGPAG Trigger: CCCCGCAGGCCCGCGCCCCAACTCACTTCCCGTCCC...CTGTGCGTTTCCCATGAACCCATTGTGCATGGGCATGCCCACCATCATGCCAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| CDS-3UTR CAA 90 bp | AGACTACACAGAGGTGGGAGCTATGGTTCCATTATCTCTAAACCCCATATGCCCGGGACGGGAAGTGAGTaGGGGCGCGGGCCTGCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RLHRGGSYGSIISKPHMPGTGSE*GRGPAG Trigger: CCCCGCAGGCCCGCGCCCCAACTCACTTCCCGTCCC...GGGCATATGGGGTTTAGAGATAATGGAACCATAGCTCCCACCTCTGTGTAGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140583.2 |
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| CDS-3UTR CAA 90 bp | GTGAGCAGAAGGGAAGATGGAAGCTACCTGTCTGTAGACACATGTGTGCTTATTACCTGGCGGAAGGTGTaGGCCAGGCGAGTGAGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: VSRREDGSYLSVDTCVLITWRKV*ARRVSS Trigger: CGAGCTCACTCGCCTGGCCAACACCTTCCGCCAGGT...AATAAGCACACATGTGTCTACAGACAGGTAGCTTCCATCTTCCCTTCTGCTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
||
| CDS-3UTR CAA 90 bp | GTTTTACTTTCTAAAATGTCTCAGTCTTGGAGTCACAGAAGAGTGATGGTCTCACAGGCGAGGCCCGCGTaGCGCTGTTCGGTGGCGCGC | + |
|
Preference number: 5 (lower is better) Translates to: VLLSKMSQSWSHRRVMVSQARPA*RCSVAR Trigger: GCGCGCCACCGAACAGCGCAACGCGGGCCTCGCCTG...TGAGACCATCACTCTTCTGTGACTCCAAGACTGAGACATTTTAGAAAGTAAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| CDS-3UTR CAA 90 bp | GCAGTATTGAGATGGCTTGTGGGAGGGAGGGATGGAGGGAGGGAGGGAGGGAGGAATACAGCTTTCGGATaGGACAAGATGACTTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: AVLRWLVGGRDGGREGGRNTAFG*DKMTCR Trigger: TCTGCAAGTCATCTTGTCCAATCCGAAAGCTGTATT...CCTCCCTCCCTCCCTCCCTCCATCCCTCCCTCCCACAAGCCATCTCAATACTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| CDS-3UTR CAA 90 bp | GCTAATAGACTACACAGAGGTGGGAGCTATGGTTCCATTATCTCTAAACCCCATACCTGGCGGAAGGTGTaGGCCAGGCGAGTGAGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: ANRLHRGGSYGSIISKPHTWRKV*ARRVSS Trigger: CGAGCTCACTCGCCTGGCCAACACCTTCCGCCAGGT...ATGGGGTTTAGAGATAATGGAACCATAGCTCCCACCTCTGTGTAGTCTATTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140583.2 |
||
| CDS-3UTR CAA 90 bp | GTGAGCAGAAGGGAAGATGGAAGCTACCTGTCTGTAGACACATGTGTGCTTATTGAAGAGCACGCCGGGTaGCGCGCTCTGATGCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: VSRREDGSYLSVDTCVLIEEHAG*RALMLM Trigger: CATCAGCATCAGAGCGCGCAACCCGGCGTGCTCTTC...AATAAGCACACATGTGTCTACAGACAGGTAGCTTCCATCTTCCCTTCTGCTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
||
| CDS-3UTR CAA 90 bp | GCTAATAGACTACACAGAGGTGGGAGCTATGGTTCCATTATCTCTAAACCCCATGAAGAGCACGCCGGGTaGCGCGCTCTGATGCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: ANRLHRGGSYGSIISKPHEEHAG*RALMLM Trigger: CATCAGCATCAGAGCGCGCAACCCGGCGTGCTCTTC...ATGGGGTTTAGAGATAATGGAACCATAGCTCCCACCTCTGTGTAGTCTATTAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140583.2 |
||
| CDS-3UTR CAA 90 bp | GAAAGCAGGTTGAGAAACCATCTGTGTGGAGGGCAGCTTTGCTCATACTCCCCATCCAGACTGTACGTGTaGTCATCGTCGGCGAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: ESRLRNHLCGGQLCSYSPSRLYV*SSSAKK Trigger: CTTCTTCGCCGACGATGACAACACGTACAGTCTGGA...TGGGGAGTATGAGCAAAGCTGCCCTCCACACAGATGGTTTCTCAACCTGCTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
||
| CDS GCA 90 bp | TTCCCAGTTTCTTCTAGGCCCCATCCTACAGGGACAAATGTCCCATaGATTCTGCTCACCAGCCATGTCAATGGCAAAAGGCCTGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FPVSSRPHPTGTNVP*ILLTSHVNGKRPVF Trigger: GAAGACAGGCCTTTTGCCATTGACATGGCTGGTGAGCAGAATGCATGGGACATTTGTCCCTGTAGGATGGGGCCTAGAAGAAACTGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000140583.2 ENSMUST00000144602.2 |
||
| CDS-3UTR CAA 90 bp | CTAATAGACTACACAGAGGTGGGAGCTATGGTTCCATTATCTCTAAACCCCATATCCAGACTGTACGTGTaGTCATCGTCGGCGAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LIDYTEVGAMVPLSLNPISRLYV*SSSAKK Trigger: CTTCTTCGCCGACGATGACAACACGTACAGTCTGGA...TATGGGGTTTAGAGATAATGGAACCATAGCTCCCACCTCTGTGTAGTCTATTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140583.2 |
||
| CDS-3UTR CAA 90 bp | CCACATTGGGAAGCTGCTCAGTTAACTTGCATAATCAGTTTTATTTGCAAAATTGGCTCATTGGCTAGATaGACCTTCTCTGTCCGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: PHWEAAQLTCIISFICKIGSLAR*TFSVRV Trigger: CACTCGGACAGAGAAGGTCAATCTAGCCAATGAGCC...AATTTTGCAAATAAAACTGATTATGCAAGTTAACTGAGCAGCTTCCCAATGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
||
| CDS CCA 72 bp | GGCGCAGCCAGGCGAGGCCCGCGTTGCGCTGTTCGGTaGCGCGCGGCAGCCACGGTCGCTTGTAGCGCCGCG | + |
|
Preference number: 6 (lower is better) Translates to: GAARRGPRCAVR*RAAATVACSAA Trigger: CGCGGCGCTACAAGCGACCGTGGCTGCCGCGCGCCACCGAACAGCGCAACGCGGGCCTCGCCTGGCTGCGCC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063663.6 ENSMUST00000140583.2 |
||
| CDS GCA 72 bp | GCTGATGCCTCTGGCGCAGCCAGGCGAGGCCCGCGTTaGGCTGTTCGGTGGCGCGCGGCAGCCACGGTCGCT | + |
|
Preference number: 6 (lower is better) Translates to: ADASGAARRGPR*AVRWRAAATVA Trigger: AGCGACCGTGGCTGCCGCGCGCCACCGAACAGCGCAACGCGGGCCTCGCCTGGCTGCGCCAGAGGCATCAGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063663.6 ENSMUST00000140583.2 |
||
| CDS GCA 72 bp | GGTGCGTGTTGGGCAGGCCGGCCCGAGCTAGGAAGCTaGTCACCAGCTCGCTGCGCGTCGCCCGGTCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: GACWAGRPELGS*SPARCASPGPP Trigger: TGGAGGACCGGGCGACGCGCAGCGAGCTGGTGAGCAGCTTCCTAGCTCGGGCCGGCCTGCCCAACACGCACC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063663.6 ENSMUST00000140583.2 |
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| CDS GCA 72 bp | GGCCGGCCCGAGCTAGGAAGCTGCTCACCAGCTCGCTaGGCGTCGCCCGGTCCTCCACCAGGATCCAGTGCA | + |
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Preference number: 6 (lower is better) Translates to: GRPELGSCSPAR*ASPGPPPGSSA Trigger: TGCACTGGATCCTGGTGGAGGACCGGGCGACGCGCAGCGAGCTGGTGAGCAGCTTCCTAGCTCGGGCCGGCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063663.6 ENSMUST00000140583.2 |
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| CDS GCA 72 bp | CGCGTCGCCCGGTCCTCCACCAGGATCCAGTGCAACTaGGCCACCTGGCGGAAGGTGTTGGCCAGGCGAGTG | + |
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Preference number: 6 (lower is better) Translates to: RVARSSTRIQCN*ATWRKVLARRV Trigger: CACTCGCCTGGCCAACACCTTCCGCCAGGTGGCGCAGTTGCACTGGATCCTGGTGGAGGACCGGGCGACGCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063663.6 ENSMUST00000140583.2 |
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| CDS CCA 72 bp | TGTAGCGCCGCGGCGTGGGCACATGCAGGTGCGTGTTaGGCAGGCCGGCCCGAGCTAGGAAGCTGCTCACCA | + |
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Preference number: 6 (lower is better) Translates to: CSAAAWAHAGAC*AGRPELGSCSP Trigger: TGGTGAGCAGCTTCCTAGCTCGGGCCGGCCTGCCCAACACGCACCTGCATGTGCCCACGCCGCGGCGCTACA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063663.6 ENSMUST00000140583.2 |
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| CDS GCA 72 bp | CCGTCGGAGCGGGACTCGGGAGCCCCCGCAGCCCACTaGATGGGGAGAGAAGTAGGGACGGGAAGTGAGTTG | + |
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Preference number: 6 (lower is better) Translates to: PSERDSGAPAAH*MGREVGTGSEL Trigger: CAACTCACTTCCCGTCCCTACTTCTCTCCCCATGCAGTGGGCTGCGGGGGCTCCCGAGTCCCGCTCCGACGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063663.6 ENSMUST00000140583.2 |
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| CDS CCA 72 bp | CGGTCCTCCACCAGGATCCAGTGCAACTGCGCCACCTaGCGGAAGGTGTTGGCCAGGCGAGTGAGCTCGGCT | + |
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Preference number: 6 (lower is better) Translates to: RSSTRIQCNCAT*RKVLARRVSSA Trigger: AGCCGAGCTCACTCGCCTGGCCAACACCTTCCGCCAGGTGGCGCAGTTGCACTGGATCCTGGTGGAGGACCG 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063663.6 ENSMUST00000140583.2 |
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| CDS CAA 72 bp | CGCCCACCAACTAGTCCCACAGGCCAGACAGAAACCTaGCGAGTGGTCCTCATCTCCTGGAAGAGCTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: RPPTSPTGQTET*RVVLISWKSSR Trigger: TCTGGAGCTCTTCCAGGAGATGAGGACCACTCGCAAGGTTTCTGTCTGGCCTGTGGGACTAGTTGGTGGGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063663.6 ENSMUST00000140583.2 |
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| CDS CAA 90 bp | TGCATCCCTGGCTGGGATCCACGGCGCTTAAATACAGCTTTCGGATaGGACAAGATGACTTGCAGACTCACAGCAAACCCAGCCATGTCA | + |
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Preference number: 6 (lower is better) Translates to: CIPGWDPRRLNTAFG*DKMTCRLTANPAMS Trigger: TGACATGGCTGGGTTTGCTGTGAGTCTGCAAGTCATCTTGTCCAATCCGAAAGCTGTATTTAAGCGCCGTGGATCCCAGCCAGGGATGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| CDS GCA 72 bp | TCTTCTAGGCCCCATCCTACAGGGACAAATGTCCCATaGATTCTGCTCACCAGCCATGTCAATGGCAAAAGG | + |
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Preference number: 6 (lower is better) Translates to: SSRPHPTGTNVP*ILLTSHVNGKR Trigger: CCTTTTGCCATTGACATGGCTGGTGAGCAGAATGCATGGGACATTTGTCCCTGTAGGATGGGGCCTAGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000140583.2 ENSMUST00000144602.2 |
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| CDS CAA 72 bp | GGCTGGGATCCACGGCGCTTAAATACAGCTTTCGGATaGGACAAGATGACTTGCAGACTCACAGCAAACCCA | + |
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Preference number: 6 (lower is better) Translates to: GWDPRRLNTAFG*DKMTCRLTANP Trigger: TGGGTTTGCTGTGAGTCTGCAAGTCATCTTGTCCAATCCGAAAGCTGTATTTAAGCGCCGTGGATCCCAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| CDS GCA 72 bp | GGCTCATTGGCTAGATTGACCTTCTCTGTCCGAGTGTaGCACACGAGAACCTTGGTGCAGTTACTAGCTTTT | + |
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Preference number: 6 (lower is better) Translates to: GSLARLTFSVRV*HTRTLVQLLAF Trigger: AAAAGCTAGTAACTGCACCAAGGTTCTCGTGTGGCACACTCGGACAGAGAAGGTCAATCTAGCCAATGAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| CDS CAA 72 bp | GCGCTTAAATACAGCTTTCGGATTGGACAAGATGACTaGCAGACTCACAGCAAACCCAGCCATGTCAATGGC | + |
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Preference number: 6 (lower is better) Translates to: ALKYSFRIGQDD*QTHSKPSHVNG Trigger: GCCATTGACATGGCTGGGTTTGCTGTGAGTCTGCAAGTCATCTTGTCCAATCCGAAAGCTGTATTTAAGCGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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| CDS GCA 72 bp | TCAACTGTTGTTATCTGCTTTAGAAAGTCAGATTCTTaGATCCCTGGCTGGGATCCACGGCGCTTAAATACA | + |
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Preference number: 6 (lower is better) Translates to: STVVICFRKSDS*IPGWDPRRLNT Trigger: TGTATTTAAGCGCCGTGGATCCCAGCCAGGGATGCAAGAATCTGACTTTCTAAAGCAGATAACAACAGTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063663.6 |
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