Pregenerated sensors for B3GALT6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050796Ensembl transcript IDs: ENSMUST00000052185.5
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGACTCTCTTGGTGGCCCTGGCCTCAGTCACCCCGGAACTTCAGGTaGTGTTACTCCGCCCACTTAAGCCCGCCATTGACTGGCCACATG | + |
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Preference number: 1 (lower is better) Translates to: RLSWWPWPQSPRNFR*CYSAHLSPPLTGHM Trigger: CATGTGGCCAGTCAATGGCGGGCTTAAGTGGGCGGAGTAACAGCACCTGAAGTTCCGGGGTGACTGAGGCCAGGGCCACCAAGAGAGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| 3UTR CCA 90 bp | ACTCTAAACTCATCAAGTGAGGAGGCCCTTCCCTCACACTCCAGATaGCTGATAGGTGGCATTACATGGTCAGTGTGTGTGCATGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: TLNSSSEEALPSHSR*LIGGITWSVCVHVC Trigger: ACACACATGCACACACACTGACCATGTAATGCCACCTATCAGCCATCTGGAGTGTGAGGGAAGGGCCTCCTCACTTGATGAGTTTAGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| 3UTR CCA 90 bp | TTGTTAGCTGTCTCTGGCCATCAGTCCCAAGGTCTCAACAGCAATTaGATAAACCAAGCTCAGCCCAGATCATTTATCAGATTGTTCAGG | + |
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Preference number: 1 (lower is better) Translates to: LLAVSGHQSQGLNSN*INQAQPRSFIRLFR Trigger: CCTGAACAATCTGATAAATGATCTGGGCTGAGCTTGGTTTATCCAATTGCTGTTGAGACCTTGGGACTGATGGCCAGAGACAGCTAACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| 3UTR GCA 90 bp | GAGAAGTATTCTGAAATGTATTCCCAGAGATCACACGGTGGAACCTaGTTGGTGAGACAGCTGCTTAACTTTTATATTAGCCCGATACTG | + |
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Preference number: 1 (lower is better) Translates to: EKYSEMYSQRSHGGT*LVRQLLNFYISPIL Trigger: CAGTATCGGGCTAATATAAAAGTTAAGCAGCTGTCTCACCAAGCAGGTTCCACCGTGTGATCTCTGGGAATACATTTCAGAATACTTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| 3UTR-3UTR CCA 90 bp | CATGTCTCTCCGCATCCACAGTTCCCCAGGCAGGAATACCTTCAGGCTATACAGTTGAGACTCTCTTGGTaGCCCTGGCCTCAGTCACCC | + |
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Preference number: 2 (lower is better) Translates to: HVSPHPQFPRQEYLQAIQLRLSW*PWPQSP Trigger: GGGTGACTGAGGCCAGGGCCACCAAGAGAGTCTCAA...CTGTATAGCCTGAAGGTATTCCTGCCTGGGGAACTGTGGATGCGGAGAGACATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| 3UTR CAA 90 bp | GCGCACGCGCTCAGATGCAATCTCCACATTCATAACCAGATGTCCTaGGGTAGGCCTTACACCAGACCACTAATGGCACCCTCAGTGGAC | + |
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Preference number: 2 (lower is better) Translates to: AHALRCNLHIHNQMS*GRPYTRPLMAPSVD Trigger: GTCCACTGAGGGTGCCATTAGTGGTCTGGTGTAAGGCCTACCCAAGGACATCTGGTTATGAATGTGGAGATTGCATCTGAGCGCGTGCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| 3UTR CAA 90 bp | CTTCCATACCCTCCCATGTTGATACCTAAGGGACTTGAGACTCTCTaGGTGGCCCTGGCCTCAGTCACCCCGGAACTTCAGGTGCTGTTA | + |
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Preference number: 2 (lower is better) Translates to: LPYPPMLIPKGLETL*VALASVTPELQVLL Trigger: TAACAGCACCTGAAGTTCCGGGGTGACTGAGGCCAGGGCCACCAAGAGAGTCTCAAGTCCCTTAGGTATCAACATGGGAGGGTATGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| 3UTR-3UTR TCA 90 bp | AGCTACACCTCAGAAGCAAATCCACTGGCAGCCCACCCTGCAGTCCAGAATAGGCTGTCAATGTTCCTGTaGCAAGGCTTCCATACCCTC | + |
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Preference number: 2 (lower is better) Translates to: SYTSEANPLAAHPAVQNRLSMFL*QGFHTL Trigger: GAGGGTATGGAAGCCTTGTCACAGGAACATTGACAG...CCTATTCTGGACTGCAGGGTGGGCTGCCAGTGGATTTGCTTCTGAGGTGTAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| 3UTR-3UTR TCA 90 bp | CATGTCTCTCCGCATCCACAGTTCCCCAGGCAGGAATACCTTCAGGCTATACAGGCACTGATATGGCCGTaGACCCAAGGAAATGAGAAC | + |
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Preference number: 2 (lower is better) Translates to: HVSPHPQFPRQEYLQAIQALIWP*TQGNEN Trigger: GTTCTCATTTCCTTGGGTTCACGGCCATATCAGTGC...CTGTATAGCCTGAAGGTATTCCTGCCTGGGGAACTGTGGATGCGGAGAGACATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| 3UTR CAA 90 bp | GTGAGGCTGTGCAGAACAATCAAGATGGGCAGTGAGCTGCAGAGTTaGCAGAATGAGGGCACTCTAAACTCATCAAGTGAGGAGGCCCTT | + |
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Preference number: 2 (lower is better) Translates to: VRLCRTIKMGSELQS*QNEGTLNSSSEEAL Trigger: AAGGGCCTCCTCACTTGATGAGTTTAGAGTGCCCTCATTCTGCAAACTCTGCAGCTCACTGCCCATCTTGATTGTTCTGCACAGCCTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| 3UTR CAA 90 bp | CATACTGTCAATGTTCCTGTGACAAGGCTTCCATACCCTCCCATGTaGATACCTAAGGGACTTGAGACTCTCTTGGTGGCCCTGGCCTCA | + |
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Preference number: 2 (lower is better) Translates to: HTVNVPVTRLPYPPM*IPKGLETLLVALAS Trigger: TGAGGCCAGGGCCACCAAGAGAGTCTCAAGTCCCTTAGGTATCAACATGGGAGGGTATGGAAGCCTTGTCACAGGAACATTGACAGTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| 3UTR-3UTR TCA 90 bp | CATGTCTCTCCGCATCCACAGTTCCCCAGGCAGGAATACCTTCAGGCTATACAGAATCAAGATGGGCAGTaGGCTGCAGAGTTTGCAGAA | + |
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Preference number: 2 (lower is better) Translates to: HVSPHPQFPRQEYLQAIQNQDGQ*AAEFAE Trigger: TTCTGCAAACTCTGCAGCTCACTGCCCATCTTGATT...CTGTATAGCCTGAAGGTATTCCTGCCTGGGGAACTGTGGATGCGGAGAGACATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| 3UTR-3UTR TCA 90 bp | AGCTACACCTCAGAAGCAAATCCACTGGCAGCCCACCCTGCAGTCCAGAATAGGGGCCACTTAGGCTGTTaGCAGATTAATCCACAGATA | + |
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Preference number: 2 (lower is better) Translates to: SYTSEANPLAAHPAVQNRGHLGC*QINPQI Trigger: TATCTGTGGATTAATCTGTCAACAGCCTAAGTGGCC...CCTATTCTGGACTGCAGGGTGGGCTGCCAGTGGATTTGCTTCTGAGGTGTAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| 3UTR CAA 90 bp | AACAGCAATTGGATAAACCAAGCTCAGCCCAGATCATTTATCAGATaGTTCAGGATGCTTGGCCTGTGTCAGGAGAGACCCCGGCACCTG | + |
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Preference number: 2 (lower is better) Translates to: NSNWINQAQPRSFIR*FRMLGLCQERPRHL Trigger: CAGGTGCCGGGGTCTCTCCTGACACAGGCCAAGCATCCTGAACAATCTGATAAATGATCTGGGCTGAGCTTGGTTTATCCAATTGCTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| 3UTR-3UTR TCA 90 bp | AGCTACACCTCAGAAGCAAATCCACTGGCAGCCCACCCTGCAGTCCAGAATAGGTACGCTCACACACCCTaGAAAGCTTTAAAAGTCATG | + |
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Preference number: 2 (lower is better) Translates to: SYTSEANPLAAHPAVQNRYAHTP*KALKVM Trigger: CATGACTTTTAAAGCTTTTCAGGGTGTGTGAGCGTA...CCTATTCTGGACTGCAGGGTGGGCTGCCAGTGGATTTGCTTCTGAGGTGTAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| 3UTR-3UTR CCA 90 bp | CATGTCTCTCCGCATCCACAGTTCCCCAGGCAGGAATACCTTCAGGCTATACAGATAGGTGGCATTACATaGTCAGTGTGTGTGCATGTG | + |
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Preference number: 2 (lower is better) Translates to: HVSPHPQFPRQEYLQAIQIGGIT*SVCVHV Trigger: CACATGCACACACACTGACCATGTAATGCCACCTAT...CTGTATAGCCTGAAGGTATTCCTGCCTGGGGAACTGTGGATGCGGAGAGACATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| 3UTR-3UTR GCA 90 bp | CAGAGATCACACGGTGGAACCTGCTTGGTGAGACAGCTGCTTAACTTTTATATTCTGCAGGTGAGGCTGTaGAGAACAATCAAGATGGGC | + |
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Preference number: 2 (lower is better) Translates to: QRSHGGTCLVRQLLNFYILQVRL*RTIKMG Trigger: GCCCATCTTGATTGTTCTGCACAGCCTCACCTGCAG...AATATAAAAGTTAAGCAGCTGTCTCACCAAGCAGGTTCCACCGTGTGATCTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| 3UTR-3UTR CCA 90 bp | TCACACGGTGGAACCTGCTTGGTGAGACAGCTGCTTAACTTTTATATTAGCCCGGGTCTCAACAGCAATTaGATAAACCAAGCTCAGCCC | + |
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Preference number: 2 (lower is better) Translates to: SHGGTCLVRQLLNFYISPGLNSN*INQAQP Trigger: GGGCTGAGCTTGGTTTATCCAATTGCTGTTGAGACC...CGGGCTAATATAAAAGTTAAGCAGCTGTCTCACCAAGCAGGTTCCACCGTGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| 3UTR CAA 90 bp | ATTGTTAGCTGTCTCTGGCCATCAGTCCCAAGGTCTCAACAGCAATaGGATAAACCAAGCTCAGCCCAGATCATTTATCAGATTGTTCAG | + |
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Preference number: 2 (lower is better) Translates to: IVSCLWPSVPRSQQQ*DKPSSAQIIYQIVQ Trigger: CTGAACAATCTGATAAATGATCTGGGCTGAGCTTGGTTTATCCAATTGCTGTTGAGACCTTGGGACTGATGGCCAGAGACAGCTAACAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| 3UTR-3UTR TCA 90 bp | GGCCTTGACGGTGGGTGGTGGCTGAGAAGTATTCTGAAATGTATTCCCAGAGATGTGAATAAACCACTTTaGAAGACAAACTTTGTGTGG | + |
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Preference number: 2 (lower is better) Translates to: GLDGGWWLRSILKCIPRDVNKPL*KTNFVW Trigger: CCACACAAAGTTTGTCTTTCAAAGTGGTTTATTCAC...ATCTCTGGGAATACATTTCAGAATACTTCTCAGCCACCACCCACCGTCAAGGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| 3UTR-3UTR GCA 90 bp | AACCACTTTGAAAGACAAACTTTGTGTGGACATTCTGATCCCAAGTGCCTTACAAGATGGGCAGTGAGCTaGAGAGTTTGCAGAATGAGG | + |
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Preference number: 2 (lower is better) Translates to: NHFERQTLCGHSDPKCLTRWAVS*RVCRMR Trigger: CCTCATTCTGCAAACTCTGCAGCTCACTGCCCATCT...TGTAAGGCACTTGGGATCAGAATGTCCACACAAAGTTTGTCTTTCAAAGTGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| 3UTR-3UTR CCA 90 bp | AACCACTTTGAAAGACAAACTTTGTGTGGACATTCTGATCCCAAGTGCCTTACAATTGTTCAGGATGCTTaGCCTGTGTCAGGAGAGACC | + |
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Preference number: 2 (lower is better) Translates to: NHFERQTLCGHSDPKCLTIVQDA*PVSGET Trigger: GGTCTCTCCTGACACAGGCCAAGCATCCTGAACAAT...TGTAAGGCACTTGGGATCAGAATGTCCACACAAAGTTTGTCTTTCAAAGTGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| 3UTR-3UTR CCA 90 bp | GGTAGCAAATATTATTTCCTTAAGAGAGACTCTAGGAAGCCTCAACACAGGTTTAAGCCCGCCATTGACTaGCCACATGCTTACACTCTC | + |
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Preference number: 2 (lower is better) Translates to: GSKYYFLKRDSRKPQHRFKPAID*PHAYTL Trigger: GAGAGTGTAAGCATGTGGCCAGTCAATGGCGGGCTT...AAACCTGTGTTGAGGCTTCCTAGAGTCTCTCTTAAGGAAATAATATTTGCTACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| 3UTR-3UTR TCA 90 bp | AACCACTTTGAAAGACAAACTTTGTGTGGACATTCTGATCCCAAGTGCCTTACAGAATGGAACTCTGTCTaGACAATACAAAGACAACTT | + |
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Preference number: 2 (lower is better) Translates to: NHFERQTLCGHSDPKCLTEWNSV*TIQRQL Trigger: AAGTTGTCTTTGTATTGTTCAGACAGAGTTCCATTC...TGTAAGGCACTTGGGATCAGAATGTCCACACAAAGTTTGTCTTTCAAAGTGGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| 3UTR GCA 72 bp | TGGTGGCCCTGGCCTCAGTCACCCCGGAACTTCAGGTaGTGTTACTCCGCCCACTTAAGCCCGCCATTGACT | + |
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Preference number: 3 (lower is better) Translates to: WWPWPQSPRNFR*CYSAHLSPPLT Trigger: AGTCAATGGCGGGCTTAAGTGGGCGGAGTAACAGCACCTGAAGTTCCGGGGTGACTGAGGCCAGGGCCACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| 3UTR-3UTR CAA 90 bp | GTGTGTGTGTGCGCGCGCGTGCGCGCGCACGCGCTCAGATGCAATCTCCACATTAGGTCTCAACAGCAATaGGATAAACCAAGCTCAGCC | + |
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Preference number: 3 (lower is better) Translates to: VCVCARVRAHALRCNLHIRSQQQ*DKPSSA Trigger: GGCTGAGCTTGGTTTATCCAATTGCTGTTGAGACCT...AATGTGGAGATTGCATCTGAGCGCGTGCGCGCGCACGCGCGCGCACACACACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| 3UTR CCA 72 bp | TCAGCCCAGATCATTTATCAGATTGTTCAGGATGCTTaGCCTGTGTCAGGAGAGACCCCGGCACCTGCAGTG | + |
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Preference number: 3 (lower is better) Translates to: SAQIIYQIVQDA*PVSGETPAPAV Trigger: CACTGCAGGTGCCGGGGTCTCTCCTGACACAGGCCAAGCATCCTGAACAATCTGATAAATGATCTGGGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| 3UTR CCA 72 bp | GGAGGCCCTTCCCTCACACTCCAGATGGCTGATAGGTaGCATTACATGGTCAGTGTGTGTGCATGTGTGTGT | + |
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Preference number: 3 (lower is better) Translates to: GGPSLTLQMADR*HYMVSVCACVC Trigger: ACACACACATGCACACACACTGACCATGTAATGCCACCTATCAGCCATCTGGAGTGTGAGGGAAGGGCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| 3UTR CCA 72 bp | TCATCAAGTGAGGAGGCCCTTCCCTCACACTCCAGATaGCTGATAGGTGGCATTACATGGTCAGTGTGTGTG | + |
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Preference number: 3 (lower is better) Translates to: SSSEEALPSHSR*LIGGITWSVCV Trigger: CACACACACTGACCATGTAATGCCACCTATCAGCCATCTGGAGTGTGAGGGAAGGGCCTCCTCACTTGATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| 3UTR CCA 72 bp | GCTTTGACAAGAGCTACACCTCAGAAGCAAATCCACTaGCAGCCCACCCTGCAGTCCAGAATAGGCCTTGAT | + |
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Preference number: 3 (lower is better) Translates to: ALTRATPQKQIH*QPTLQSRIGLD Trigger: ATCAAGGCCTATTCTGGACTGCAGGGTGGGCTGCCAGTGGATTTGCTTCTGAGGTGTAGCTCTTGTCAAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| 3UTR CCA 72 bp | GTCTCTGGCCATCAGTCCCAAGGTCTCAACAGCAATTaGATAAACCAAGCTCAGCCCAGATCATTTATCAGA | + |
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Preference number: 3 (lower is better) Translates to: VSGHQSQGLNSN*INQAQPRSFIR Trigger: TCTGATAAATGATCTGGGCTGAGCTTGGTTTATCCAATTGCTGTTGAGACCTTGGGACTGATGGCCAGAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| 3UTR-3UTR CAA 90 bp | TGCTTACACTCTCAAGGACCTCCTTGGAGTCGGCCACAATTGATAACTGAAGGCTTTGAAAGACAAACTTaGTGTGGACATTCTGATCCC | + |
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Preference number: 3 (lower is better) Translates to: CLHSQGPPWSRPQLITEGFERQT*CGHSDP Trigger: GGGATCAGAATGTCCACACAAAGTTTGTCTTTCAAA...GCCTTCAGTTATCAATTGTGGCCGACTCCAAGGAGGTCCTTGAGAGTGTAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| 3UTR TCA 72 bp | TGTATTCCCAGAGATCACACGGTGGAACCTGCTTGGTaGGACAGCTGCTTAACTTTTATATTAGCCCGATAC | + |
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Preference number: 3 (lower is better) Translates to: CIPRDHTVEPAW*DSCLTFILARY Trigger: GTATCGGGCTAATATAAAAGTTAAGCAGCTGTCTCACCAAGCAGGTTCCACCGTGTGATCTCTGGGAATACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| 3UTR TCA 72 bp | TTTGAAATAATGCTCGAGTTTGCCACTAGGCAGCTTTaGCAAGAGCTACACCTCAGAAGCAAATCCACTGGC | + |
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Preference number: 3 (lower is better) Translates to: FEIMLEFATRQL*QELHLRSKSTG Trigger: GCCAGTGGATTTGCTTCTGAGGTGTAGCTCTTGTCAAAGCTGCCTAGTGGCAAACTCGAGCATTATTTCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| 3UTR TCA 72 bp | AAGCCTCAACACAGGTTTGGATCTCTGAAACTTTGCTaGGACACCAGGAATCTGAAGGTCTTTGTGGAAGCT | + |
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Preference number: 3 (lower is better) Translates to: KPQHRFGSLKLC*DTRNLKVFVEA Trigger: AGCTTCCACAAAGACCTTCAGATTCCTGGTGTCTCAGCAAAGTTTCAGAGATCCAAACCTGTGTTGAGGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| 3UTR TCA 72 bp | TCCCAAGTGCCTTACAGTCCATACGCTCACACACCCTaGAAAGCTTTAAAAGTCATGTCTGTTCAGAAACAA | + |
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Preference number: 3 (lower is better) Translates to: SQVPYSPYAHTP*KALKVMSVQKQ Trigger: TTGTTTCTGAACAGACATGACTTTTAAAGCTTTTCAGGGTGTGTGAGCGTATGGACTGTAAGGCACTTGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| 3UTR GCA 72 bp | TCTGAAATGTATTCCCAGAGATCACACGGTGGAACCTaGTTGGTGAGACAGCTGCTTAACTTTTATATTAGC | + |
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Preference number: 3 (lower is better) Translates to: SEMYSQRSHGGT*LVRQLLNFYIS Trigger: GCTAATATAAAAGTTAAGCAGCTGTCTCACCAAGCAGGTTCCACCGTGTGATCTCTGGGAATACATTTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| 3UTR-3UTR CAA 90 bp | GGTAGCAAATATTATTTCCTTAAGAGAGACTCTAGGAAGCCTCAACACAGGTTTTCTAACCTAGTTGACTaGAAAATCAAGTCAAACCTC | + |
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Preference number: 3 (lower is better) Translates to: GSKYYFLKRDSRKPQHRFSNLVD*KIKSNL Trigger: GAGGTTTGACTTGATTTTCAAGTCAACTAGGTTAGA...AAACCTGTGTTGAGGCTTCCTAGAGTCTCTCTTAAGGAAATAATATTTGCTACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| CDS-3UTR GCA 90 bp | GTGTGTGTGTGCGCGCGCGTGCGCGCGCACGCGCTCAGATGCAATCTCCACATTGTGCCAGCCACGTGCTaGGCACTGCGGTGCGGCGCT | + |
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Preference number: 4 (lower is better) Translates to: VCVCARVRAHALRCNLHIVPATC*ALRCGA Trigger: AGCGCCGCACCGCAGTGCGCAGCACGTGGCTGGCAC...AATGTGGAGATTGCATCTGAGCGCGTGCGCGCGCACGCGCGCGCACACACACAC 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| CDS-3UTR GCA 90 bp | GTGTGTGTGTGCGCGCGCGTGCGCGCGCACGCGCTCAGATGCAATCTCCACATTGGGTCGTGCTCCCGTTaGACATCCACTGGTGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: VCVCARVRAHALRCNLHIGSCSR*TSTGAS Trigger: GCTGGCACCAGTGGATGTGCAACGGGAGCACGACCC...AATGTGGAGATTGCATCTGAGCGCGTGCGCGCGCACGCGCGCGCACACACACAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| CDS-3UTR CCA 90 bp | GTGTGTGTGTGCGCGCGCGTGCGCGCGCACGCGCTCAGATGCAATCTCCACATTCTCCGTGTCGAAGCGTaGGTCGTGCTCCCGTTGCAC | + |
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Preference number: 4 (lower is better) Translates to: VCVCARVRAHALRCNLHILRVEA*VVLPLH Trigger: GTGCAACGGGAGCACGACCCACGCTTCGACACGGAG...AATGTGGAGATTGCATCTGAGCGCGTGCGCGCGCACGCGCGCGCACACACACAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| CDS-3UTR GCA 90 bp | GTGTGTGTGTGCGCGCGCGTGCGCGCGCACGCGCTCAGATGCAATCTCCACATTTTGCACATCCACTGGTaGCAGCCAGGTGCCCAGCGA | + |
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Preference number: 4 (lower is better) Translates to: VCVCARVRAHALRCNLHILHIHW*QPGAQR Trigger: TCGCTGGGCACCTGGCTGGCACCAGTGGATGTGCAA...AATGTGGAGATTGCATCTGAGCGCGTGCGCGCGCACGCGCGCGCACACACACAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| CDS-3UTR GCA 90 bp | AGCTACACCTCAGAAGCAAATCCACTGGCAGCCCACCCTGCAGTCCAGAATAGGAGCAGCAGGTCCCCGTaGTGCGCCTGCTCGAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: SYTSEANPLAAHPAVQNRSSRSP*CACSSS Trigger: TGAGCTCGAGCAGGCGCAGCACGGGGACCTGCTGCT...CCTATTCTGGACTGCAGGGTGGGCTGCCAGTGGATTTGCTTCTGAGGTGTAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| CDS-3UTR TCA 90 bp | CATGTCTCTCCGCATCCACAGTTCCCCAGGCAGGAATACCTTCAGGCTATACAGCCAGGACCTTGGCCGTaGGGTTCTCGTAGGCGTCGC | + |
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Preference number: 4 (lower is better) Translates to: HVSPHPQFPRQEYLQAIQPGPWP*GSRRRR Trigger: GCGACGCCTACGAGAACCTCACGGCCAAGGTCCTGG...CTGTATAGCCTGAAGGTATTCCTGCCTGGGGAACTGTGGATGCGGAGAGACATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| CDS-3UTR GCA 90 bp | CATGTCTCTCCGCATCCACAGTTCCCCAGGCAGGAATACCTTCAGGCTATACAGAGGGAACGCCCTCCTTaGGCTGGCAGCACTGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: HVSPHPQFPRQEYLQAIQRERPP*AGSTGR Trigger: CCTCCCAGTGCTGCCAGCGCAAGGAGGGCGTTCCCT...CTGTATAGCCTGAAGGTATTCCTGCCTGGGGAACTGTGGATGCGGAGAGACATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| CDS-3UTR CCA 90 bp | GGCCTTGACGGTGGGTGGTGGCTGAGAAGTATTCTGAAATGTATTCCCAGAGATTTGCGCTGGCAGCACTaGGAGGGTGGAGCTGACCAG | + |
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Preference number: 4 (lower is better) Translates to: GLDGGWWLRSILKCIPRDLRWQH*EGGADQ Trigger: CTGGTCAGCTCCACCCTCCCAGTGCTGCCAGCGCAA...ATCTCTGGGAATACATTTCAGAATACTTCTCAGCCACCACCCACCGTCAAGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| CDS-3UTR GCA 90 bp | TCAGCCCAGATCATTTATCAGATTGTTCAGGATGCTTGGCCTGTGTCAGGAGAGAGCAGGTCCCCGTGCTaGGCCTGCTCGAGCTCAAGA | + |
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Preference number: 4 (lower is better) Translates to: SAQIIYQIVQDAWPVSGESRSPC*ACSSSR Trigger: TCTTGAGCTCGAGCAGGCGCAGCACGGGGACCTGCT...CTCTCCTGACACAGGCCAAGCATCCTGAACAATCTGATAAATGATCTGGGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| 3UTR CAA 72 bp | TTACACTCTCAAGGACCTCCTTGGAGTCGGCCACAATaGATAACTGAAGGCCTTGACGGTGGGTGGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LHSQGPPWSRPQ*ITEGLDGGWWL Trigger: CAGCCACCACCCACCGTCAAGGCCTTCAGTTATCAATTGTGGCCGACTCCAAGGAGGTCCTTGAGAGTGTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
||
| CDS-3UTR GCA 90 bp | CATTTTGAGATGAATTCAACACAGTCTGCAGGTGAGGCTGTGCAGAACAATCAATCCCCGTGCTGCGCCTaGTCGAGCTCAAGAGCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: HFEMNSTQSAGEAVQNNQSPCCA*SSSRAR Trigger: GCGCGCTCTTGAGCTCGAGCAGGCGCAGCACGGGGA...TTGATTGTTCTGCACAGCCTCACCTGCAGACTGTGTTGAATTCATCTCAAAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
||
| CDS-3UTR TCA 90 bp | ATCAAGATGGGCAGTGAGCTGCAGAGTTTGCAGAATGAGGGCACTCTAAACTCAAGTCGTCGTCCGCCTTaGGCACGAACTCGAAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IKMGSELQSLQNEGTLNSSRRPP*ARTRSP Trigger: TGGACTTCGAGTTCGTGCTCAAGGCGGACGACGACT...TGAGTTTAGAGTGCCCTCATTCTGCAAACTCTGCAGCTCACTGCCCATCTTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
||
| CDS-3UTR GCA 90 bp | AGCTACACCTCAGAAGCAAATCCACTGGCAGCCCACCCTGCAGTCCAGAATAGGTGCAGCAACATCTGTTaGTTCTCCAACATGTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SYTSEANPLAAHPAVQNRCSNIC*FSNMSS Trigger: AGAGGACATGTTGGAGAAGCAACAGATGTTGCTGCA...CCTATTCTGGACTGCAGGGTGGGCTGCCAGTGGATTTGCTTCTGAGGTGTAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
||
| 3UTR CAA 72 bp | CTCAGATGCAATCTCCACATTCATAACCAGATGTCCTaGGGTAGGCCTTACACCAGACCACTAATGGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: LRCNLHIHNQMS*GRPYTRPLMAP Trigger: GGGTGCCATTAGTGGTCTGGTGTAAGGCCTACCCAAGGACATCTGGTTATGAATGTGGAGATTGCATCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
||
| 3UTR CAA 72 bp | AATGTTCCTGTGACAAGGCTTCCATACCCTCCCATGTaGATACCTAAGGGACTTGAGACTCTCTTGGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: NVPVTRLPYPPM*IPKGLETLLVA Trigger: GGCCACCAAGAGAGTCTCAAGTCCCTTAGGTATCAACATGGGAGGGTATGGAAGCCTTGTCACAGGAACATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
||
| 3UTR CAA 72 bp | TGGATAAACCAAGCTCAGCCCAGATCATTTATCAGATaGTTCAGGATGCTTGGCCTGTGTCAGGAGAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: WINQAQPRSFIR*FRMLGLCQERP Trigger: GGGTCTCTCCTGACACAGGCCAAGCATCCTGAACAATCTGATAAATGATCTGGGCTGAGCTTGGTTTATCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
||
| 3UTR CAA 72 bp | TGTCTCTGGCCATCAGTCCCAAGGTCTCAACAGCAATaGGATAAACCAAGCTCAGCCCAGATCATTTATCAG | + |
|
Preference number: 4 (lower is better) Translates to: CLWPSVPRSQQQ*DKPSSAQIIYQ Trigger: CTGATAAATGATCTGGGCTGAGCTTGGTTTATCCAATTGCTGTTGAGACCTTGGGACTGATGGCCAGAGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
||
| 3UTR CAA 72 bp | TGCAGAACAATCAAGATGGGCAGTGAGCTGCAGAGTTaGCAGAATGAGGGCACTCTAAACTCATCAAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: CRTIKMGSELQS*QNEGTLNSSSE Trigger: CTCACTTGATGAGTTTAGAGTGCCCTCATTCTGCAAACTCTGCAGCTCACTGCCCATCTTGATTGTTCTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
||
| 3UTR CAA 72 bp | CACTCTGTAGACCAGGCTGGCCTTGAACCCAGAGATTaGCCTGCCTCTGTAAATTCTTATCTATGCAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: HSVDQAGLEPRD*PASVNSYLCKH Trigger: ATGCTTGCATAGATAAGAATTTACAGAGGCAGGCAAATCTCTGGGTTCAAGGCCAGCCTGGTCTACAGAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
||
| 3UTR CAA 72 bp | GAAATGTATTCCCAGAGATCACACGGTGGAACCTGCTaGGTGAGACAGCTGCTTAACTTTTATATTAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: EMYSQRSHGGTC*VRQLLNFYISP Trigger: CGGGCTAATATAAAAGTTAAGCAGCTGTCTCACCAAGCAGGTTCCACCGTGTGATCTCTGGGAATACATTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
||
| 3UTR CAA 72 bp | ACATCATCCAAAGCTGGAGGTCATGGCCAGCTCAGGTaGTCCATTTATCCTGGAGCCACCTTATTATATTTT | + |
|
Preference number: 4 (lower is better) Translates to: TSSKAGGHGQLR*SIYPGATLLYF Trigger: AAAATATAATAAGGTGGCTCCAGGATAAATGGACAACCTGAGCTGGCCATGACCTCCAGCTTTGGATGATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
||
| CDS GCA 90 bp | GTCCGCCACGCCTCTCCGGTGCCAGCCACGTGCTGCGCACTGCGGTaGGGCGCTCGACCGCGCGGGGCGCACTGGCCACCAGCACCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: VRHASPVPATCCALR*GARPRGAHWPPAPP Trigger: TGGCGGTGCTGGTGGCCAGTGCGCCCCGCGCGGTCGAGCGCCGCACCGCAGTGCGCAGCACGTGGCTGGCACCGGAGAGGCGTGGCGGAC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
||
| CDS GCA 90 bp | CTCGGGTCCGCCACGCCTCTCCGGTGCCAGCCACGTGCTGCGCACTaGGGTGCGGCGCTCGACCGCGCGGGGCGCACTGGCCACCAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LGSATPLRCQPRAAH*GAALDRAGRTGHQH Trigger: GTGCTGGTGGCCAGTGCGCCCCGCGCGGTCGAGCGCCGCACCGCAGTGCGCAGCACGTGGCTGGCACCGGAGAGGCGTGGCGGACCCGAG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
||
| CDS GCA 90 bp | CCCACACGTCCTCGGGTCCGCCACGCCTCTCCGGTGCCAGCCACGTaGTGCGCACTGCGGTGCGGCGCTCGACCGCGCGGGGCGCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: PTRPRVRHASPVPAT*CALRCGARPRGAHW Trigger: CCAGTGCGCCCCGCGCGGTCGAGCGCCGCACCGCAGTGCGCAGCACGTGGCTGGCACCGGAGAGGCGTGGCGGACCCGAGGACGTGTGGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
||
| CDS GCA 90 bp | ACACGTCCTCGGGTCCGCCACGCCTCTCCGGTGCCAGCCACGTGCTaGGCACTGCGGTGCGGCGCTCGACCGCGCGGGGCGCACTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: TRPRVRHASPVPATC*ALRCGARPRGAHWP Trigger: TGGCCAGTGCGCCCCGCGCGGTCGAGCGCCGCACCGCAGTGCGCAGCACGTGGCTGGCACCGGAGAGGCGTGGCGGACCCGAGGACGTGT 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
||
| CDS GCA 90 bp | GCTCGAGCTCAAGAGCGCGCCGCTCCTCCGAGCCTAAGCCGCCAGTaGCCACGGCGAAGCGCGCCCACACGTCCTCGGGTCCGCCACGCC | + |
|
Preference number: 5 (lower is better) Translates to: ARAQERAAPPSLSRQ*PRRSAPTRPRVRHA Trigger: GGCGTGGCGGACCCGAGGACGTGTGGGCGCGCTTCGCCGTGGGCACTGGCGGCTTAGGCTCGGAGGAGCGGCGCGCTCTTGAGCTCGAGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
||
| CDS GCA 90 bp | GCGTCTCGCCCTCGGAAGCGCAGCGCGCCAGGTACAACAGAGTGGTaGCGCAGAACGCCAGGCCGCCTAGGCCCAGCGCCACCCGGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: ASRPRKRSAPGTTEW*RRTPGRLGPAPPGA Trigger: GGCACCGGGTGGCGCTGGGCCTAGGCGGCCTGGCGTTCTGCGGCACCACTCTGTTGTACCTGGCGCGCTGCGCTTCCGAGGGCGAGACGC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
||
| CDS CCA 90 bp | AGGGCGTCTCGCCCTCGGAAGCGCAGCGCGCCAGGTACAACAGAGTaGTGCCGCAGAACGCCAGGCCGCCTAGGCCCAGCGCCACCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: RASRPRKRSAPGTTE*CRRTPGRLGPAPPG Trigger: ACCGGGTGGCGCTGGGCCTAGGCGGCCTGGCGTTCTGCGGCACCACTCTGTTGTACCTGGCGCGCTGCGCTTCCGAGGGCGAGACGCCCT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
||
| CDS TCA 90 bp | AGTCGCAGAGTTGCCAGGCTGCTTCTCGCCAGCGACCTCCCGGCTTaGCGCGCCCGCGCCCGGAAAAGAAGCCCCAGTAGAGGCGCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: SRRVARLLLASDLPA*RARARKRSPSRGAG Trigger: GCCGGCGCCTCTACTGGGGCTTCTTTTCCGGGCGCGGGCGCGTCAAGCCGGGAGGTCGCTGGCGAGAAGCAGCCTGGCAACTCTGCGACT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
||
| CDS GCA 90 bp | ACCGCCCAACGCGTAGGGCAGGTAGTAGTCGCAGAGTTGCCAGGCTaGTTCTCGCCAGCGACCTCCCGGCTTGACGCGCCCGCGCCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: TAQRVGQVVVAELPG*FSPATSRLDAPAPG Trigger: TCCGGGCGCGGGCGCGTCAAGCCGGGAGGTCGCTGGCGAGAAGCAGCCTGGCAACTCTGCGACTACTACCTGCCCTACGCGTTGGGCGGT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
||
| CDS GCA 90 bp | AGCGTGGGTCGTGCTCCCGTTGCACATCCACTGGTGCCAGCCAGGTaGCCAGCGATACGTCTTCACTGTGCCACGCGCGCAGGTACTCGC | + |
|
Preference number: 5 (lower is better) Translates to: SVGRAPVAHPLVPAR*PAIRLHCATRAGTR Trigger: GCGAGTACCTGCGCGCGTGGCACAGTGAAGACGTATCGCTGGGCACCTGGCTGGCACCAGTGGATGTGCAACGGGAGCACGACCCACGCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
||
| CDS GCA 90 bp | CTCCGTGTCGAAGCGTGGGTCGTGCTCCCGTTGCACATCCACTGGTaGCAGCCAGGTGCCCAGCGATACGTCTTCACTGTGCCACGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: LRVEAWVVLPLHIHW*QPGAQRYVFTVPRA Trigger: CGCGCGTGGCACAGTGAAGACGTATCGCTGGGCACCTGGCTGGCACCAGTGGATGTGCAACGGGAGCACGACCCACGCTTCGACACGGAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
||
| CDS CCA 90 bp | GTACTCCGTGTCGAAGCGTGGGTCGTGCTCCCGTTGCACATCCACTaGTGCCAGCCAGGTGCCCAGCGATACGTCTTCACTGTGCCACGC | + |
|
Preference number: 5 (lower is better) Translates to: VLRVEAWVVLPLHIH*CQPGAQRYVFTVPR Trigger: GCGTGGCACAGTGAAGACGTATCGCTGGGCACCTGGCTGGCACCAGTGGATGTGCAACGGGAGCACGACCCACGCTTCGACACGGAGTAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
||
| CDS TCA 90 bp | CCAGCGATACGTCTTCACTGTGCCACGCGCGCAGGTACTCGCGGCTaGGGCGCAGGTAATGCACCAGGTCCGCAGAAAGGACATAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: PAIRLHCATRAGTRG*GAGNAPGPQKGHSH Trigger: GTGGCTATGTCCTTTCTGCGGACCTGGTGCATTACCTGCGCCTCAGCCGCGAGTACCTGCGCGCGTGGCACAGTGAAGACGTATCGCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
||
| CDS GCA 90 bp | CCTCGAGATTTGTACTCCGTGTCGAAGCGTGGGTCGTGCTCCCGTTaGACATCCACTGGTGCCAGCCAGGTGCCCAGCGATACGTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PRDLYSVSKRGSCSR*TSTGASQVPSDTSS Trigger: TGAAGACGTATCGCTGGGCACCTGGCTGGCACCAGTGGATGTGCAACGGGAGCACGACCCACGCTTCGACACGGAGTACAAATCTCGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
||
| CDS GCA 90 bp | TTGTTGCAGCCTCGAGATTTGTACTCCGTGTCGAAGCGTGGGTCGTaGTCCCGTTGCACATCCACTGGTGCCAGCCAGGTGCCCAGCGAT | + |
|
Preference number: 5 (lower is better) Translates to: LLQPRDLYSVSKRGS*SRCTSTGASQVPSD Trigger: ATCGCTGGGCACCTGGCTGGCACCAGTGGATGTGCAACGGGAGCACGACCCACGCTTCGACACGGAGTACAAATCTCGAGGCTGCAACAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
||
| CDS TCA 90 bp | TCAGGGAACGCCCTCCTTGCGCTGGCAGCACTGGGAGGGTGGAGCTaGCCAGTCATAGACATAGGAAAGGCGCAACTGCACCTCATGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SGNALLALAALGGWS*PVIDIGKAQLHLML Trigger: AAGCATGAGGTGCAGTTGCGCCTTTCCTATGTCTATGACTGGTCAGCTCCACCCTCCCAGTGCTGCCAGCGCAAGGAGGGCGTTCCCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
||
| CDS CCA 90 bp | ATACTGATTGTTGCAGCCTCGAGATTTGTACTCCGTGTCGAAGCGTaGGTCGTGCTCCCGTTGCACATCCACTGGTGCCAGCCAGGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: ILIVAASRFVLRVEA*VVLPLHIHWCQPGA Trigger: GGCACCTGGCTGGCACCAGTGGATGTGCAACGGGAGCACGACCCACGCTTCGACACGGAGTACAAATCTCGAGGCTGCAACAATCAGTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
||
| CDS-3UTR CAA 90 bp | TCAGCCCAGATCATTTATCAGATTGTTCAGGATGCTTGGCCTGTGTCAGGAGAGTGGGTCGTGCTCCCGTaGCACATCCACTGGTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SAQIIYQIVQDAWPVSGEWVVLP*HIHWCQ Trigger: CTGGCACCAGTGGATGTGCAACGGGAGCACGACCCA...CTCTCCTGACACAGGCCAAGCATCCTGAACAATCTGATAAATGATCTGGGCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
||
| CDS GCA 90 bp | TGCACCTCATGCTTGCACAACCGGCCCTCATGCAGCAACATCTGTTaGTTCTCCAACATGTCCTCTGGGCTTTGCTTGTGTGTCACCAGA | + |
|
Preference number: 5 (lower is better) Translates to: CTSCLHNRPSCSNIC*FSNMSSGLCLCVTR Trigger: TCTGGTGACACACAAGCAAAGCCCAGAGGACATGTTGGAGAAGCAACAGATGTTGCTGCATGAGGGCCGGTTGTGCAAGCATGAGGTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
||
| CDS CCA 90 bp | CCGGCCCTCATGCAGCAACATCTGTTGCTTCTCCAACATGTCCTCTaGGCTTTGCTTGTGTGTCACCAGATACTGATTGTTGCAGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: PALMQQHLLLLQHVL*ALLVCHQILIVAAS Trigger: CGAGGCTGCAACAATCAGTATCTGGTGACACACAAGCAAAGCCCAGAGGACATGTTGGAGAAGCAACAGATGTTGCTGCATGAGGGCCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
||
| CDS-3UTR CAA 90 bp | TGCTTACACTCTCAAGGACCTCCTTGGAGTCGGCCACAATTGATAACTGAAGGCGTAGTAGTCGCAGAGTaGCCAGGCTGCTTCTCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: CLHSQGPPWSRPQLITEGVVVAE*PGCFSP Trigger: TGGCGAGAAGCAGCCTGGCAACTCTGCGACTACTAC...GCCTTCAGTTATCAATTGTGGCCGACTCCAAGGAGGTCCTTGAGAGTGTAAGCA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
||
| CDS GCA 90 bp | ACATGTCCTCTGGGCTTTGCTTGTGTGTCACCAGATACTGATTGTTaGAGCCTCGAGATTTGTACTCCGTGTCGAAGCGTGGGTCGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: TCPLGFACVSPDTDC*SLEICTPCRSVGRA Trigger: AGCACGACCCACGCTTCGACACGGAGTACAAATCTCGAGGCTGCAACAATCAGTATCTGGTGACACACAAGCAAAGCCCAGAGGACATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
||
| CDS GCA 90 bp | CTGACCAGTCATAGACATAGGAAAGGCGCAACTGCACCTCATGCTTaGACAACCGGCCCTCATGCAGCAACATCTGTTGCTTCTCCAACA | + |
|
Preference number: 5 (lower is better) Translates to: LTSHRHRKGATAPHA*TTGPHAATSVASPT Trigger: TGTTGGAGAAGCAACAGATGTTGCTGCATGAGGGCCGGTTGTGCAAGCATGAGGTGCAGTTGCGCCTTTCCTATGTCTATGACTGGTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
||
| CDS-3UTR CAA 90 bp | CCAAGTGCCTTACAGTCCATACGCTCACACACCCTGAAAAGCTTTAAAAGTCATGAGTCGTCGTCCGCCTaGAGCACGAACTCGAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PSALQSIRSHTLKSFKSHESSSA*STNSKS Trigger: GGACTTCGAGTTCGTGCTCAAGGCGGACGACGACTC...ATGACTTTTAAAGCTTTTCAGGGTGTGTGAGCGTATGGACTGTAAGGCACTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
||
| CDS GCA 72 bp | GCCACGCCTCTCCGGTGCCAGCCACGTGCTGCGCACTaGGGTGCGGCGCTCGACCGCGCGGGGCGCACTGGC | + |
|
Preference number: 6 (lower is better) Translates to: ATPLRCQPRAAH*GAALDRAGRTG Trigger: GCCAGTGCGCCCCGCGCGGTCGAGCGCCGCACCGCAGTGCGCAGCACGTGGCTGGCACCGGAGAGGCGTGGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
||
| CDS GCA 72 bp | CCTCGGGTCCGCCACGCCTCTCCGGTGCCAGCCACGTaGTGCGCACTGCGGTGCGGCGCTCGACCGCGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: PRVRHASPVPAT*CALRCGARPRG Trigger: CCCGCGCGGTCGAGCGCCGCACCGCAGTGCGCAGCACGTGGCTGGCACCGGAGAGGCGTGGCGGACCCGAGG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
||
| CDS GCA 72 bp | GCCTCTCCGGTGCCAGCCACGTGCTGCGCACTGCGGTaGGGCGCTCGACCGCGCGGGGCGCACTGGCCACCA | + |
|
Preference number: 6 (lower is better) Translates to: ASPVPATCCALR*GARPRGAHWPP Trigger: TGGTGGCCAGTGCGCCCCGCGCGGTCGAGCGCCGCACCGCAGTGCGCAGCACGTGGCTGGCACCGGAGAGGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
||
| CDS GCA 72 bp | GCGTCGCGCAGGGCGGGCAGCAGCAGCAGGTCCCCGTaGTGCGCCTGCTCGAGCTCAAGAGCGCGCCGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ASRRAGSSSRSP*CACSSSRARRS Trigger: GGAGCGGCGCGCTCTTGAGCTCGAGCAGGCGCAGCACGGGGACCTGCTGCTGCTGCCCGCCCTGCGCGACGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
||
| CDS GCA 72 bp | TCGCGCAGGGCGGGCAGCAGCAGCAGGTCCCCGTGCTaGGCCTGCTCGAGCTCAAGAGCGCGCCGCTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SRRAGSSSRSPC*ACSSSRARRSS Trigger: GGAGGAGCGGCGCGCTCTTGAGCTCGAGCAGGCGCAGCACGGGGACCTGCTGCTGCTGCCCGCCCTGCGCGA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
||
| CDS GCA 72 bp | CAAGAGCGCGCCGCTCCTCCGAGCCTAAGCCGCCAGTaGCCACGGCGAAGCGCGCCCACACGTCCTCGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: QERAAPPSLSRQ*PRRSAPTRPRV Trigger: GACCCGAGGACGTGTGGGCGCGCTTCGCCGTGGGCACTGGCGGCTTAGGCTCGGAGGAGCGGCGCGCTCTTG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
||
| CDS CCA 72 bp | CGCCCTCGGAAGCGCAGCGCGCCAGGTACAACAGAGTaGTGCCGCAGAACGCCAGGCCGCCTAGGCCCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: RPRKRSAPGTTE*CRRTPGRLGPA Trigger: CGCTGGGCCTAGGCGGCCTGGCGTTCTGCGGCACCACTCTGTTGTACCTGGCGCGCTGCGCTTCCGAGGGCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
||
| CDS GCA 72 bp | CCTCGGAAGCGCAGCGCGCCAGGTACAACAGAGTGGTaGCGCAGAACGCCAGGCCGCCTAGGCCCAGCGCCA | + |
|
Preference number: 6 (lower is better) Translates to: PRKRSAPGTTEW*RRTPGRLGPAP Trigger: TGGCGCTGGGCCTAGGCGGCCTGGCGTTCTGCGGCACCACTCTGTTGTACCTGGCGCGCTGCGCTTCCGAGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
||
| CDS GCA 72 bp | GGTGCCAGCCAGGTGCCCAGCGATACGTCTTCACTGTaGCACGCGCGCAGGTACTCGCGGCTGAGGCGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GASQVPSDTSSL*HARRYSRLRRR Trigger: CCTGCGCCTCAGCCGCGAGTACCTGCGCGCGTGGCACAGTGAAGACGTATCGCTGGGCACCTGGCTGGCACC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
||
| CDS TCA 72 bp | CATCCAGCCAGGTCAGCATGGCCAGGACCTTGGCCGTaGGGTTCTCGTAGGCGTCGCGCAGGGCGGGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: HPARSAWPGPWP*GSRRRRAGRAA Trigger: TGCTGCCCGCCCTGCGCGACGCCTACGAGAACCTCACGGCCAAGGTCCTGGCCATGCTGACCTGGCTGGATG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
||
| CDS TCA 72 bp | GTTGCCAGGCTGCTTCTCGCCAGCGACCTCCCGGCTTaGCGCGCCCGCGCCCGGAAAAGAAGCCCCAGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: VARLLLASDLPA*RARARKRSPSR Trigger: TCTACTGGGGCTTCTTTTCCGGGCGCGGGCGCGTCAAGCCGGGAGGTCGCTGGCGAGAAGCAGCCTGGCAAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
||
| CDS GCA 72 bp | CGCGTAGGGCAGGTAGTAGTCGCAGAGTTGCCAGGCTaGTTCTCGCCAGCGACCTCCCGGCTTGACGCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: RVGQVVVAELPG*FSPATSRLDAP Trigger: GGGCGCGTCAAGCCGGGAGGTCGCTGGCGAGAAGCAGCCTGGCAACTCTGCGACTACTACCTGCCCTACGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
||
| CDS CAA 90 bp | GACATAGCCACCGCCCAACGCGTAGGGCAGGTAGTAGTCGCAGAGTaGCCAGGCTGCTTCTCGCCAGCGACCTCCCGGCTTGACGCGCCC | + |
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Preference number: 6 (lower is better) Translates to: DIATAQRVGQVVVAE*PGCFSPATSRLDAP Trigger: GGGCGCGTCAAGCCGGGAGGTCGCTGGCGAGAAGCAGCCTGGCAACTCTGCGACTACTACCTGCCCTACGCGTTGGGCGGTGGCTATGTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| CDS CAA 72 bp | ACCGCCCAACGCGTAGGGCAGGTAGTAGTCGCAGAGTaGCCAGGCTGCTTCTCGCCAGCGACCTCCCGGCTT | + |
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Preference number: 6 (lower is better) Translates to: TAQRVGQVVVAE*PGCFSPATSRL Trigger: AAGCCGGGAGGTCGCTGGCGAGAAGCAGCCTGGCAACTCTGCGACTACTACCTGCCCTACGCGTTGGGCGGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| CDS CAA 90 bp | TCCACCAGGATAGCGTCCAGGCGCGCAAAGGAGTCGTCGTCCGCCTaGAGCACGAACTCGAAGTCCACGCGCTCATCCAGCCAGGTCAGC | + |
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Preference number: 6 (lower is better) Translates to: STRIASRRAKESSSA*STNSKSTRSSSQVS Trigger: GCTGACCTGGCTGGATGAGCGCGTGGACTTCGAGTTCGTGCTCAAGGCGGACGACGACTCCTTTGCGCGCCTGGACGCTATCCTGGTGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| CDS GCA 72 bp | GAAGCGTGGGTCGTGCTCCCGTTGCACATCCACTGGTaGCAGCCAGGTGCCCAGCGATACGTCTTCACTGTG | + |
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Preference number: 6 (lower is better) Translates to: EAWVVLPLHIHW*QPGAQRYVFTV Trigger: CACAGTGAAGACGTATCGCTGGGCACCTGGCTGGCACCAGTGGATGTGCAACGGGAGCACGACCCACGCTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| CDS GCA 72 bp | TTGTACTCCGTGTCGAAGCGTGGGTCGTGCTCCCGTTaGACATCCACTGGTGCCAGCCAGGTGCCCAGCGAT | + |
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Preference number: 6 (lower is better) Translates to: LYSVSKRGSCSR*TSTGASQVPSD Trigger: ATCGCTGGGCACCTGGCTGGCACCAGTGGATGTGCAACGGGAGCACGACCCACGCTTCGACACGGAGTACAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| CDS CCA 72 bp | GTCGAAGCGTGGGTCGTGCTCCCGTTGCACATCCACTaGTGCCAGCCAGGTGCCCAGCGATACGTCTTCACT | + |
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Preference number: 6 (lower is better) Translates to: VEAWVVLPLHIH*CQPGAQRYVFT Trigger: AGTGAAGACGTATCGCTGGGCACCTGGCTGGCACCAGTGGATGTGCAACGGGAGCACGACCCACGCTTCGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| CDS CAA 72 bp | ATAGCGTCCAGGCGCGCAAAGGAGTCGTCGTCCGCCTaGAGCACGAACTCGAAGTCCACGCGCTCATCCAGC | + |
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Preference number: 6 (lower is better) Translates to: IASRRAKESSSA*STNSKSTRSSS Trigger: GCTGGATGAGCGCGTGGACTTCGAGTTCGTGCTCAAGGCGGACGACGACTCCTTTGCGCGCCTGGACGCTAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| CDS CAA 72 bp | TTTGTACTCCGTGTCGAAGCGTGGGTCGTGCTCCCGTaGCACATCCACTGGTGCCAGCCAGGTGCCCAGCGA | + |
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Preference number: 6 (lower is better) Translates to: FVLRVEAWVVLP*HIHWCQPGAQR Trigger: TCGCTGGGCACCTGGCTGGCACCAGTGGATGTGCAACGGGAGCACGACCCACGCTTCGACACGGAGTACAAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| CDS CAA 90 bp | GCCTCGAGATTTGTACTCCGTGTCGAAGCGTGGGTCGTGCTCCCGTaGCACATCCACTGGTGCCAGCCAGGTGCCCAGCGATACGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: ASRFVLRVEAWVVLP*HIHWCQPGAQRYVF Trigger: GAAGACGTATCGCTGGGCACCTGGCTGGCACCAGTGGATGTGCAACGGGAGCACGACCCACGCTTCGACACGGAGTACAAATCTCGAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| CDS GCA 72 bp | CCTCGAGATTTGTACTCCGTGTCGAAGCGTGGGTCGTaGTCCCGTTGCACATCCACTGGTGCCAGCCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: PRDLYSVSKRGS*SRCTSTGASQV Trigger: CACCTGGCTGGCACCAGTGGATGTGCAACGGGAGCACGACCCACGCTTCGACACGGAGTACAAATCTCGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| CDS CCA 72 bp | GTTGCAGCCTCGAGATTTGTACTCCGTGTCGAAGCGTaGGTCGTGCTCCCGTTGCACATCCACTGGTGCCAG | + |
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Preference number: 6 (lower is better) Translates to: VAASRFVLRVEA*VVLPLHIHWCQ Trigger: CTGGCACCAGTGGATGTGCAACGGGAGCACGACCCACGCTTCGACACGGAGTACAAATCTCGAGGCTGCAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| CDS GCA 72 bp | TGCTTGCACAACCGGCCCTCATGCAGCAACATCTGTTaGTTCTCCAACATGTCCTCTGGGCTTTGCTTGTGT | + |
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Preference number: 6 (lower is better) Translates to: CLHNRPSCSNIC*FSNMSSGLCLC Trigger: ACACAAGCAAAGCCCAGAGGACATGTTGGAGAAGCAACAGATGTTGCTGCATGAGGGCCGGTTGTGCAAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| CDS GCA 72 bp | CATAGACATAGGAAAGGCGCAACTGCACCTCATGCTTaGACAACCGGCCCTCATGCAGCAACATCTGTTGCT | + |
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Preference number: 6 (lower is better) Translates to: HRHRKGATAPHA*TTGPHAATSVA Trigger: AGCAACAGATGTTGCTGCATGAGGGCCGGTTGTGCAAGCATGAGGTGCAGTTGCGCCTTTCCTATGTCTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| CDS GCA 72 bp | CTGGGCTTTGCTTGTGTGTCACCAGATACTGATTGTTaGAGCCTCGAGATTTGTACTCCGTGTCGAAGCGTG | + |
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Preference number: 6 (lower is better) Translates to: LGFACVSPDTDC*SLEICTPCRSV Trigger: CACGCTTCGACACGGAGTACAAATCTCGAGGCTGCAACAATCAGTATCTGGTGACACACAAGCAAAGCCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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| CDS CAA 72 bp | CAACATCTGTTGCTTCTCCAACATGTCCTCTGGGCTTaGCTTGTGTGTCACCAGATACTGATTGTTGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: QHLLLLQHVLWA*LVCHQILIVAA Trigger: GGCTGCAACAATCAGTATCTGGTGACACACAAGCAAAGCCCAGAGGACATGTTGGAGAAGCAACAGATGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052185.5 |
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