RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for B3GALT6 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000050796

Ensembl transcript IDs: ENSMUST00000052185.5

Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGACTCTCTTGGTGGCCCTGGCCTCAGTCACCCCGGAACTTCAGGTaGTGTTACTCCGCCCACTTAAGCCCGCCATTGACTGGCCACATG +
Preference number: 1 (lower is better)
Translates to: RLSWWPWPQSPRNFR*CYSAHLSPPLTGHM
Trigger: CATGTGGCCAGTCAATGGCGGGCTTAAGTGGGCGGAGTAACAGCACCTGAAGTTCCGGGGTGACTGAGGCCAGGGCCACCAAGAGAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
3UTR CCA 90 bp ACTCTAAACTCATCAAGTGAGGAGGCCCTTCCCTCACACTCCAGATaGCTGATAGGTGGCATTACATGGTCAGTGTGTGTGCATGTGTGT +
Preference number: 1 (lower is better)
Translates to: TLNSSSEEALPSHSR*LIGGITWSVCVHVC
Trigger: ACACACATGCACACACACTGACCATGTAATGCCACCTATCAGCCATCTGGAGTGTGAGGGAAGGGCCTCCTCACTTGATGAGTTTAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
3UTR CCA 90 bp TTGTTAGCTGTCTCTGGCCATCAGTCCCAAGGTCTCAACAGCAATTaGATAAACCAAGCTCAGCCCAGATCATTTATCAGATTGTTCAGG +
Preference number: 1 (lower is better)
Translates to: LLAVSGHQSQGLNSN*INQAQPRSFIRLFR
Trigger: CCTGAACAATCTGATAAATGATCTGGGCTGAGCTTGGTTTATCCAATTGCTGTTGAGACCTTGGGACTGATGGCCAGAGACAGCTAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
3UTR GCA 90 bp GAGAAGTATTCTGAAATGTATTCCCAGAGATCACACGGTGGAACCTaGTTGGTGAGACAGCTGCTTAACTTTTATATTAGCCCGATACTG +
Preference number: 1 (lower is better)
Translates to: EKYSEMYSQRSHGGT*LVRQLLNFYISPIL
Trigger: CAGTATCGGGCTAATATAAAAGTTAAGCAGCTGTCTCACCAAGCAGGTTCCACCGTGTGATCTCTGGGAATACATTTCAGAATACTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
3UTR-3UTR CCA 90 bp CATGTCTCTCCGCATCCACAGTTCCCCAGGCAGGAATACCTTCAGGCTATACAGTTGAGACTCTCTTGGTaGCCCTGGCCTCAGTCACCC +
Preference number: 2 (lower is better)
Translates to: HVSPHPQFPRQEYLQAIQLRLSW*PWPQSP
Trigger: GGGTGACTGAGGCCAGGGCCACCAAGAGAGTCTCAA...CTGTATAGCCTGAAGGTATTCCTGCCTGGGGAACTGTGGATGCGGAGAGACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
3UTR CAA 90 bp GCGCACGCGCTCAGATGCAATCTCCACATTCATAACCAGATGTCCTaGGGTAGGCCTTACACCAGACCACTAATGGCACCCTCAGTGGAC +
Preference number: 2 (lower is better)
Translates to: AHALRCNLHIHNQMS*GRPYTRPLMAPSVD
Trigger: GTCCACTGAGGGTGCCATTAGTGGTCTGGTGTAAGGCCTACCCAAGGACATCTGGTTATGAATGTGGAGATTGCATCTGAGCGCGTGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
3UTR CAA 90 bp CTTCCATACCCTCCCATGTTGATACCTAAGGGACTTGAGACTCTCTaGGTGGCCCTGGCCTCAGTCACCCCGGAACTTCAGGTGCTGTTA +
Preference number: 2 (lower is better)
Translates to: LPYPPMLIPKGLETL*VALASVTPELQVLL
Trigger: TAACAGCACCTGAAGTTCCGGGGTGACTGAGGCCAGGGCCACCAAGAGAGTCTCAAGTCCCTTAGGTATCAACATGGGAGGGTATGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
3UTR-3UTR TCA 90 bp AGCTACACCTCAGAAGCAAATCCACTGGCAGCCCACCCTGCAGTCCAGAATAGGCTGTCAATGTTCCTGTaGCAAGGCTTCCATACCCTC +
Preference number: 2 (lower is better)
Translates to: SYTSEANPLAAHPAVQNRLSMFL*QGFHTL
Trigger: GAGGGTATGGAAGCCTTGTCACAGGAACATTGACAG...CCTATTCTGGACTGCAGGGTGGGCTGCCAGTGGATTTGCTTCTGAGGTGTAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
3UTR-3UTR TCA 90 bp CATGTCTCTCCGCATCCACAGTTCCCCAGGCAGGAATACCTTCAGGCTATACAGGCACTGATATGGCCGTaGACCCAAGGAAATGAGAAC +
Preference number: 2 (lower is better)
Translates to: HVSPHPQFPRQEYLQAIQALIWP*TQGNEN
Trigger: GTTCTCATTTCCTTGGGTTCACGGCCATATCAGTGC...CTGTATAGCCTGAAGGTATTCCTGCCTGGGGAACTGTGGATGCGGAGAGACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
3UTR CAA 90 bp GTGAGGCTGTGCAGAACAATCAAGATGGGCAGTGAGCTGCAGAGTTaGCAGAATGAGGGCACTCTAAACTCATCAAGTGAGGAGGCCCTT +
Preference number: 2 (lower is better)
Translates to: VRLCRTIKMGSELQS*QNEGTLNSSSEEAL
Trigger: AAGGGCCTCCTCACTTGATGAGTTTAGAGTGCCCTCATTCTGCAAACTCTGCAGCTCACTGCCCATCTTGATTGTTCTGCACAGCCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
3UTR CAA 90 bp CATACTGTCAATGTTCCTGTGACAAGGCTTCCATACCCTCCCATGTaGATACCTAAGGGACTTGAGACTCTCTTGGTGGCCCTGGCCTCA +
Preference number: 2 (lower is better)
Translates to: HTVNVPVTRLPYPPM*IPKGLETLLVALAS
Trigger: TGAGGCCAGGGCCACCAAGAGAGTCTCAAGTCCCTTAGGTATCAACATGGGAGGGTATGGAAGCCTTGTCACAGGAACATTGACAGTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
3UTR-3UTR TCA 90 bp CATGTCTCTCCGCATCCACAGTTCCCCAGGCAGGAATACCTTCAGGCTATACAGAATCAAGATGGGCAGTaGGCTGCAGAGTTTGCAGAA +
Preference number: 2 (lower is better)
Translates to: HVSPHPQFPRQEYLQAIQNQDGQ*AAEFAE
Trigger: TTCTGCAAACTCTGCAGCTCACTGCCCATCTTGATT...CTGTATAGCCTGAAGGTATTCCTGCCTGGGGAACTGTGGATGCGGAGAGACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
3UTR-3UTR TCA 90 bp AGCTACACCTCAGAAGCAAATCCACTGGCAGCCCACCCTGCAGTCCAGAATAGGGGCCACTTAGGCTGTTaGCAGATTAATCCACAGATA +
Preference number: 2 (lower is better)
Translates to: SYTSEANPLAAHPAVQNRGHLGC*QINPQI
Trigger: TATCTGTGGATTAATCTGTCAACAGCCTAAGTGGCC...CCTATTCTGGACTGCAGGGTGGGCTGCCAGTGGATTTGCTTCTGAGGTGTAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
3UTR CAA 90 bp AACAGCAATTGGATAAACCAAGCTCAGCCCAGATCATTTATCAGATaGTTCAGGATGCTTGGCCTGTGTCAGGAGAGACCCCGGCACCTG +
Preference number: 2 (lower is better)
Translates to: NSNWINQAQPRSFIR*FRMLGLCQERPRHL
Trigger: CAGGTGCCGGGGTCTCTCCTGACACAGGCCAAGCATCCTGAACAATCTGATAAATGATCTGGGCTGAGCTTGGTTTATCCAATTGCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
3UTR-3UTR TCA 90 bp AGCTACACCTCAGAAGCAAATCCACTGGCAGCCCACCCTGCAGTCCAGAATAGGTACGCTCACACACCCTaGAAAGCTTTAAAAGTCATG +
Preference number: 2 (lower is better)
Translates to: SYTSEANPLAAHPAVQNRYAHTP*KALKVM
Trigger: CATGACTTTTAAAGCTTTTCAGGGTGTGTGAGCGTA...CCTATTCTGGACTGCAGGGTGGGCTGCCAGTGGATTTGCTTCTGAGGTGTAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
3UTR-3UTR CCA 90 bp CATGTCTCTCCGCATCCACAGTTCCCCAGGCAGGAATACCTTCAGGCTATACAGATAGGTGGCATTACATaGTCAGTGTGTGTGCATGTG +
Preference number: 2 (lower is better)
Translates to: HVSPHPQFPRQEYLQAIQIGGIT*SVCVHV
Trigger: CACATGCACACACACTGACCATGTAATGCCACCTAT...CTGTATAGCCTGAAGGTATTCCTGCCTGGGGAACTGTGGATGCGGAGAGACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
3UTR-3UTR GCA 90 bp CAGAGATCACACGGTGGAACCTGCTTGGTGAGACAGCTGCTTAACTTTTATATTCTGCAGGTGAGGCTGTaGAGAACAATCAAGATGGGC +
Preference number: 2 (lower is better)
Translates to: QRSHGGTCLVRQLLNFYILQVRL*RTIKMG
Trigger: GCCCATCTTGATTGTTCTGCACAGCCTCACCTGCAG...AATATAAAAGTTAAGCAGCTGTCTCACCAAGCAGGTTCCACCGTGTGATCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
3UTR-3UTR CCA 90 bp TCACACGGTGGAACCTGCTTGGTGAGACAGCTGCTTAACTTTTATATTAGCCCGGGTCTCAACAGCAATTaGATAAACCAAGCTCAGCCC +
Preference number: 2 (lower is better)
Translates to: SHGGTCLVRQLLNFYISPGLNSN*INQAQP
Trigger: GGGCTGAGCTTGGTTTATCCAATTGCTGTTGAGACC...CGGGCTAATATAAAAGTTAAGCAGCTGTCTCACCAAGCAGGTTCCACCGTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
3UTR CAA 90 bp ATTGTTAGCTGTCTCTGGCCATCAGTCCCAAGGTCTCAACAGCAATaGGATAAACCAAGCTCAGCCCAGATCATTTATCAGATTGTTCAG +
Preference number: 2 (lower is better)
Translates to: IVSCLWPSVPRSQQQ*DKPSSAQIIYQIVQ
Trigger: CTGAACAATCTGATAAATGATCTGGGCTGAGCTTGGTTTATCCAATTGCTGTTGAGACCTTGGGACTGATGGCCAGAGACAGCTAACAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
3UTR-3UTR TCA 90 bp GGCCTTGACGGTGGGTGGTGGCTGAGAAGTATTCTGAAATGTATTCCCAGAGATGTGAATAAACCACTTTaGAAGACAAACTTTGTGTGG +
Preference number: 2 (lower is better)
Translates to: GLDGGWWLRSILKCIPRDVNKPL*KTNFVW
Trigger: CCACACAAAGTTTGTCTTTCAAAGTGGTTTATTCAC...ATCTCTGGGAATACATTTCAGAATACTTCTCAGCCACCACCCACCGTCAAGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
3UTR-3UTR GCA 90 bp AACCACTTTGAAAGACAAACTTTGTGTGGACATTCTGATCCCAAGTGCCTTACAAGATGGGCAGTGAGCTaGAGAGTTTGCAGAATGAGG +
Preference number: 2 (lower is better)
Translates to: NHFERQTLCGHSDPKCLTRWAVS*RVCRMR
Trigger: CCTCATTCTGCAAACTCTGCAGCTCACTGCCCATCT...TGTAAGGCACTTGGGATCAGAATGTCCACACAAAGTTTGTCTTTCAAAGTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
3UTR-3UTR CCA 90 bp AACCACTTTGAAAGACAAACTTTGTGTGGACATTCTGATCCCAAGTGCCTTACAATTGTTCAGGATGCTTaGCCTGTGTCAGGAGAGACC +
Preference number: 2 (lower is better)
Translates to: NHFERQTLCGHSDPKCLTIVQDA*PVSGET
Trigger: GGTCTCTCCTGACACAGGCCAAGCATCCTGAACAAT...TGTAAGGCACTTGGGATCAGAATGTCCACACAAAGTTTGTCTTTCAAAGTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
3UTR-3UTR CCA 90 bp GGTAGCAAATATTATTTCCTTAAGAGAGACTCTAGGAAGCCTCAACACAGGTTTAAGCCCGCCATTGACTaGCCACATGCTTACACTCTC +
Preference number: 2 (lower is better)
Translates to: GSKYYFLKRDSRKPQHRFKPAID*PHAYTL
Trigger: GAGAGTGTAAGCATGTGGCCAGTCAATGGCGGGCTT...AAACCTGTGTTGAGGCTTCCTAGAGTCTCTCTTAAGGAAATAATATTTGCTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
3UTR-3UTR TCA 90 bp AACCACTTTGAAAGACAAACTTTGTGTGGACATTCTGATCCCAAGTGCCTTACAGAATGGAACTCTGTCTaGACAATACAAAGACAACTT +
Preference number: 2 (lower is better)
Translates to: NHFERQTLCGHSDPKCLTEWNSV*TIQRQL
Trigger: AAGTTGTCTTTGTATTGTTCAGACAGAGTTCCATTC...TGTAAGGCACTTGGGATCAGAATGTCCACACAAAGTTTGTCTTTCAAAGTGGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
3UTR GCA 72 bp TGGTGGCCCTGGCCTCAGTCACCCCGGAACTTCAGGTaGTGTTACTCCGCCCACTTAAGCCCGCCATTGACT +
Preference number: 3 (lower is better)
Translates to: WWPWPQSPRNFR*CYSAHLSPPLT
Trigger: AGTCAATGGCGGGCTTAAGTGGGCGGAGTAACAGCACCTGAAGTTCCGGGGTGACTGAGGCCAGGGCCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
3UTR-3UTR CAA 90 bp GTGTGTGTGTGCGCGCGCGTGCGCGCGCACGCGCTCAGATGCAATCTCCACATTAGGTCTCAACAGCAATaGGATAAACCAAGCTCAGCC +
Preference number: 3 (lower is better)
Translates to: VCVCARVRAHALRCNLHIRSQQQ*DKPSSA
Trigger: GGCTGAGCTTGGTTTATCCAATTGCTGTTGAGACCT...AATGTGGAGATTGCATCTGAGCGCGTGCGCGCGCACGCGCGCGCACACACACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
3UTR CCA 72 bp TCAGCCCAGATCATTTATCAGATTGTTCAGGATGCTTaGCCTGTGTCAGGAGAGACCCCGGCACCTGCAGTG +
Preference number: 3 (lower is better)
Translates to: SAQIIYQIVQDA*PVSGETPAPAV
Trigger: CACTGCAGGTGCCGGGGTCTCTCCTGACACAGGCCAAGCATCCTGAACAATCTGATAAATGATCTGGGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
3UTR CCA 72 bp GGAGGCCCTTCCCTCACACTCCAGATGGCTGATAGGTaGCATTACATGGTCAGTGTGTGTGCATGTGTGTGT +
Preference number: 3 (lower is better)
Translates to: GGPSLTLQMADR*HYMVSVCACVC
Trigger: ACACACACATGCACACACACTGACCATGTAATGCCACCTATCAGCCATCTGGAGTGTGAGGGAAGGGCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
3UTR CCA 72 bp TCATCAAGTGAGGAGGCCCTTCCCTCACACTCCAGATaGCTGATAGGTGGCATTACATGGTCAGTGTGTGTG +
Preference number: 3 (lower is better)
Translates to: SSSEEALPSHSR*LIGGITWSVCV
Trigger: CACACACACTGACCATGTAATGCCACCTATCAGCCATCTGGAGTGTGAGGGAAGGGCCTCCTCACTTGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
3UTR CCA 72 bp GCTTTGACAAGAGCTACACCTCAGAAGCAAATCCACTaGCAGCCCACCCTGCAGTCCAGAATAGGCCTTGAT +
Preference number: 3 (lower is better)
Translates to: ALTRATPQKQIH*QPTLQSRIGLD
Trigger: ATCAAGGCCTATTCTGGACTGCAGGGTGGGCTGCCAGTGGATTTGCTTCTGAGGTGTAGCTCTTGTCAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
3UTR CCA 72 bp GTCTCTGGCCATCAGTCCCAAGGTCTCAACAGCAATTaGATAAACCAAGCTCAGCCCAGATCATTTATCAGA +
Preference number: 3 (lower is better)
Translates to: VSGHQSQGLNSN*INQAQPRSFIR
Trigger: TCTGATAAATGATCTGGGCTGAGCTTGGTTTATCCAATTGCTGTTGAGACCTTGGGACTGATGGCCAGAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
3UTR-3UTR CAA 90 bp TGCTTACACTCTCAAGGACCTCCTTGGAGTCGGCCACAATTGATAACTGAAGGCTTTGAAAGACAAACTTaGTGTGGACATTCTGATCCC +
Preference number: 3 (lower is better)
Translates to: CLHSQGPPWSRPQLITEGFERQT*CGHSDP
Trigger: GGGATCAGAATGTCCACACAAAGTTTGTCTTTCAAA...GCCTTCAGTTATCAATTGTGGCCGACTCCAAGGAGGTCCTTGAGAGTGTAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
3UTR TCA 72 bp TGTATTCCCAGAGATCACACGGTGGAACCTGCTTGGTaGGACAGCTGCTTAACTTTTATATTAGCCCGATAC +
Preference number: 3 (lower is better)
Translates to: CIPRDHTVEPAW*DSCLTFILARY
Trigger: GTATCGGGCTAATATAAAAGTTAAGCAGCTGTCTCACCAAGCAGGTTCCACCGTGTGATCTCTGGGAATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
3UTR TCA 72 bp TTTGAAATAATGCTCGAGTTTGCCACTAGGCAGCTTTaGCAAGAGCTACACCTCAGAAGCAAATCCACTGGC +
Preference number: 3 (lower is better)
Translates to: FEIMLEFATRQL*QELHLRSKSTG
Trigger: GCCAGTGGATTTGCTTCTGAGGTGTAGCTCTTGTCAAAGCTGCCTAGTGGCAAACTCGAGCATTATTTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
3UTR TCA 72 bp AAGCCTCAACACAGGTTTGGATCTCTGAAACTTTGCTaGGACACCAGGAATCTGAAGGTCTTTGTGGAAGCT +
Preference number: 3 (lower is better)
Translates to: KPQHRFGSLKLC*DTRNLKVFVEA
Trigger: AGCTTCCACAAAGACCTTCAGATTCCTGGTGTCTCAGCAAAGTTTCAGAGATCCAAACCTGTGTTGAGGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
3UTR TCA 72 bp TCCCAAGTGCCTTACAGTCCATACGCTCACACACCCTaGAAAGCTTTAAAAGTCATGTCTGTTCAGAAACAA +
Preference number: 3 (lower is better)
Translates to: SQVPYSPYAHTP*KALKVMSVQKQ
Trigger: TTGTTTCTGAACAGACATGACTTTTAAAGCTTTTCAGGGTGTGTGAGCGTATGGACTGTAAGGCACTTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
3UTR GCA 72 bp TCTGAAATGTATTCCCAGAGATCACACGGTGGAACCTaGTTGGTGAGACAGCTGCTTAACTTTTATATTAGC +
Preference number: 3 (lower is better)
Translates to: SEMYSQRSHGGT*LVRQLLNFYIS
Trigger: GCTAATATAAAAGTTAAGCAGCTGTCTCACCAAGCAGGTTCCACCGTGTGATCTCTGGGAATACATTTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
3UTR-3UTR CAA 90 bp GGTAGCAAATATTATTTCCTTAAGAGAGACTCTAGGAAGCCTCAACACAGGTTTTCTAACCTAGTTGACTaGAAAATCAAGTCAAACCTC +
Preference number: 3 (lower is better)
Translates to: GSKYYFLKRDSRKPQHRFSNLVD*KIKSNL
Trigger: GAGGTTTGACTTGATTTTCAAGTCAACTAGGTTAGA...AAACCTGTGTTGAGGCTTCCTAGAGTCTCTCTTAAGGAAATAATATTTGCTACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS-3UTR GCA 90 bp GTGTGTGTGTGCGCGCGCGTGCGCGCGCACGCGCTCAGATGCAATCTCCACATTGTGCCAGCCACGTGCTaGGCACTGCGGTGCGGCGCT +
Preference number: 4 (lower is better)
Translates to: VCVCARVRAHALRCNLHIVPATC*ALRCGA
Trigger: AGCGCCGCACCGCAGTGCGCAGCACGTGGCTGGCAC...AATGTGGAGATTGCATCTGAGCGCGTGCGCGCGCACGCGCGCGCACACACACAC
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS-3UTR GCA 90 bp GTGTGTGTGTGCGCGCGCGTGCGCGCGCACGCGCTCAGATGCAATCTCCACATTGGGTCGTGCTCCCGTTaGACATCCACTGGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: VCVCARVRAHALRCNLHIGSCSR*TSTGAS
Trigger: GCTGGCACCAGTGGATGTGCAACGGGAGCACGACCC...AATGTGGAGATTGCATCTGAGCGCGTGCGCGCGCACGCGCGCGCACACACACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS-3UTR CCA 90 bp GTGTGTGTGTGCGCGCGCGTGCGCGCGCACGCGCTCAGATGCAATCTCCACATTCTCCGTGTCGAAGCGTaGGTCGTGCTCCCGTTGCAC +
Preference number: 4 (lower is better)
Translates to: VCVCARVRAHALRCNLHILRVEA*VVLPLH
Trigger: GTGCAACGGGAGCACGACCCACGCTTCGACACGGAG...AATGTGGAGATTGCATCTGAGCGCGTGCGCGCGCACGCGCGCGCACACACACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS-3UTR GCA 90 bp GTGTGTGTGTGCGCGCGCGTGCGCGCGCACGCGCTCAGATGCAATCTCCACATTTTGCACATCCACTGGTaGCAGCCAGGTGCCCAGCGA +
Preference number: 4 (lower is better)
Translates to: VCVCARVRAHALRCNLHILHIHW*QPGAQR
Trigger: TCGCTGGGCACCTGGCTGGCACCAGTGGATGTGCAA...AATGTGGAGATTGCATCTGAGCGCGTGCGCGCGCACGCGCGCGCACACACACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS-3UTR GCA 90 bp AGCTACACCTCAGAAGCAAATCCACTGGCAGCCCACCCTGCAGTCCAGAATAGGAGCAGCAGGTCCCCGTaGTGCGCCTGCTCGAGCTCA +
Preference number: 4 (lower is better)
Translates to: SYTSEANPLAAHPAVQNRSSRSP*CACSSS
Trigger: TGAGCTCGAGCAGGCGCAGCACGGGGACCTGCTGCT...CCTATTCTGGACTGCAGGGTGGGCTGCCAGTGGATTTGCTTCTGAGGTGTAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS-3UTR TCA 90 bp CATGTCTCTCCGCATCCACAGTTCCCCAGGCAGGAATACCTTCAGGCTATACAGCCAGGACCTTGGCCGTaGGGTTCTCGTAGGCGTCGC +
Preference number: 4 (lower is better)
Translates to: HVSPHPQFPRQEYLQAIQPGPWP*GSRRRR
Trigger: GCGACGCCTACGAGAACCTCACGGCCAAGGTCCTGG...CTGTATAGCCTGAAGGTATTCCTGCCTGGGGAACTGTGGATGCGGAGAGACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS-3UTR GCA 90 bp CATGTCTCTCCGCATCCACAGTTCCCCAGGCAGGAATACCTTCAGGCTATACAGAGGGAACGCCCTCCTTaGGCTGGCAGCACTGGGAGG +
Preference number: 4 (lower is better)
Translates to: HVSPHPQFPRQEYLQAIQRERPP*AGSTGR
Trigger: CCTCCCAGTGCTGCCAGCGCAAGGAGGGCGTTCCCT...CTGTATAGCCTGAAGGTATTCCTGCCTGGGGAACTGTGGATGCGGAGAGACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS-3UTR CCA 90 bp GGCCTTGACGGTGGGTGGTGGCTGAGAAGTATTCTGAAATGTATTCCCAGAGATTTGCGCTGGCAGCACTaGGAGGGTGGAGCTGACCAG +
Preference number: 4 (lower is better)
Translates to: GLDGGWWLRSILKCIPRDLRWQH*EGGADQ
Trigger: CTGGTCAGCTCCACCCTCCCAGTGCTGCCAGCGCAA...ATCTCTGGGAATACATTTCAGAATACTTCTCAGCCACCACCCACCGTCAAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS-3UTR GCA 90 bp TCAGCCCAGATCATTTATCAGATTGTTCAGGATGCTTGGCCTGTGTCAGGAGAGAGCAGGTCCCCGTGCTaGGCCTGCTCGAGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: SAQIIYQIVQDAWPVSGESRSPC*ACSSSR
Trigger: TCTTGAGCTCGAGCAGGCGCAGCACGGGGACCTGCT...CTCTCCTGACACAGGCCAAGCATCCTGAACAATCTGATAAATGATCTGGGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
3UTR CAA 72 bp TTACACTCTCAAGGACCTCCTTGGAGTCGGCCACAATaGATAACTGAAGGCCTTGACGGTGGGTGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LHSQGPPWSRPQ*ITEGLDGGWWL
Trigger: CAGCCACCACCCACCGTCAAGGCCTTCAGTTATCAATTGTGGCCGACTCCAAGGAGGTCCTTGAGAGTGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS-3UTR GCA 90 bp CATTTTGAGATGAATTCAACACAGTCTGCAGGTGAGGCTGTGCAGAACAATCAATCCCCGTGCTGCGCCTaGTCGAGCTCAAGAGCGCGC +
Preference number: 4 (lower is better)
Translates to: HFEMNSTQSAGEAVQNNQSPCCA*SSSRAR
Trigger: GCGCGCTCTTGAGCTCGAGCAGGCGCAGCACGGGGA...TTGATTGTTCTGCACAGCCTCACCTGCAGACTGTGTTGAATTCATCTCAAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS-3UTR TCA 90 bp ATCAAGATGGGCAGTGAGCTGCAGAGTTTGCAGAATGAGGGCACTCTAAACTCAAGTCGTCGTCCGCCTTaGGCACGAACTCGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: IKMGSELQSLQNEGTLNSSRRPP*ARTRSP
Trigger: TGGACTTCGAGTTCGTGCTCAAGGCGGACGACGACT...TGAGTTTAGAGTGCCCTCATTCTGCAAACTCTGCAGCTCACTGCCCATCTTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS-3UTR GCA 90 bp AGCTACACCTCAGAAGCAAATCCACTGGCAGCCCACCCTGCAGTCCAGAATAGGTGCAGCAACATCTGTTaGTTCTCCAACATGTCCTCT +
Preference number: 4 (lower is better)
Translates to: SYTSEANPLAAHPAVQNRCSNIC*FSNMSS
Trigger: AGAGGACATGTTGGAGAAGCAACAGATGTTGCTGCA...CCTATTCTGGACTGCAGGGTGGGCTGCCAGTGGATTTGCTTCTGAGGTGTAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
3UTR CAA 72 bp CTCAGATGCAATCTCCACATTCATAACCAGATGTCCTaGGGTAGGCCTTACACCAGACCACTAATGGCACCC +
Preference number: 4 (lower is better)
Translates to: LRCNLHIHNQMS*GRPYTRPLMAP
Trigger: GGGTGCCATTAGTGGTCTGGTGTAAGGCCTACCCAAGGACATCTGGTTATGAATGTGGAGATTGCATCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
3UTR CAA 72 bp AATGTTCCTGTGACAAGGCTTCCATACCCTCCCATGTaGATACCTAAGGGACTTGAGACTCTCTTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: NVPVTRLPYPPM*IPKGLETLLVA
Trigger: GGCCACCAAGAGAGTCTCAAGTCCCTTAGGTATCAACATGGGAGGGTATGGAAGCCTTGTCACAGGAACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
3UTR CAA 72 bp TGGATAAACCAAGCTCAGCCCAGATCATTTATCAGATaGTTCAGGATGCTTGGCCTGTGTCAGGAGAGACCC +
Preference number: 4 (lower is better)
Translates to: WINQAQPRSFIR*FRMLGLCQERP
Trigger: GGGTCTCTCCTGACACAGGCCAAGCATCCTGAACAATCTGATAAATGATCTGGGCTGAGCTTGGTTTATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
3UTR CAA 72 bp TGTCTCTGGCCATCAGTCCCAAGGTCTCAACAGCAATaGGATAAACCAAGCTCAGCCCAGATCATTTATCAG +
Preference number: 4 (lower is better)
Translates to: CLWPSVPRSQQQ*DKPSSAQIIYQ
Trigger: CTGATAAATGATCTGGGCTGAGCTTGGTTTATCCAATTGCTGTTGAGACCTTGGGACTGATGGCCAGAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
3UTR CAA 72 bp TGCAGAACAATCAAGATGGGCAGTGAGCTGCAGAGTTaGCAGAATGAGGGCACTCTAAACTCATCAAGTGAG +
Preference number: 4 (lower is better)
Translates to: CRTIKMGSELQS*QNEGTLNSSSE
Trigger: CTCACTTGATGAGTTTAGAGTGCCCTCATTCTGCAAACTCTGCAGCTCACTGCCCATCTTGATTGTTCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
3UTR CAA 72 bp CACTCTGTAGACCAGGCTGGCCTTGAACCCAGAGATTaGCCTGCCTCTGTAAATTCTTATCTATGCAAGCAT +
Preference number: 4 (lower is better)
Translates to: HSVDQAGLEPRD*PASVNSYLCKH
Trigger: ATGCTTGCATAGATAAGAATTTACAGAGGCAGGCAAATCTCTGGGTTCAAGGCCAGCCTGGTCTACAGAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
3UTR CAA 72 bp GAAATGTATTCCCAGAGATCACACGGTGGAACCTGCTaGGTGAGACAGCTGCTTAACTTTTATATTAGCCCG +
Preference number: 4 (lower is better)
Translates to: EMYSQRSHGGTC*VRQLLNFYISP
Trigger: CGGGCTAATATAAAAGTTAAGCAGCTGTCTCACCAAGCAGGTTCCACCGTGTGATCTCTGGGAATACATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
3UTR CAA 72 bp ACATCATCCAAAGCTGGAGGTCATGGCCAGCTCAGGTaGTCCATTTATCCTGGAGCCACCTTATTATATTTT +
Preference number: 4 (lower is better)
Translates to: TSSKAGGHGQLR*SIYPGATLLYF
Trigger: AAAATATAATAAGGTGGCTCCAGGATAAATGGACAACCTGAGCTGGCCATGACCTCCAGCTTTGGATGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS GCA 90 bp GTCCGCCACGCCTCTCCGGTGCCAGCCACGTGCTGCGCACTGCGGTaGGGCGCTCGACCGCGCGGGGCGCACTGGCCACCAGCACCGCCA +
Preference number: 5 (lower is better)
Translates to: VRHASPVPATCCALR*GARPRGAHWPPAPP
Trigger: TGGCGGTGCTGGTGGCCAGTGCGCCCCGCGCGGTCGAGCGCCGCACCGCAGTGCGCAGCACGTGGCTGGCACCGGAGAGGCGTGGCGGAC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS GCA 90 bp CTCGGGTCCGCCACGCCTCTCCGGTGCCAGCCACGTGCTGCGCACTaGGGTGCGGCGCTCGACCGCGCGGGGCGCACTGGCCACCAGCAC +
Preference number: 5 (lower is better)
Translates to: LGSATPLRCQPRAAH*GAALDRAGRTGHQH
Trigger: GTGCTGGTGGCCAGTGCGCCCCGCGCGGTCGAGCGCCGCACCGCAGTGCGCAGCACGTGGCTGGCACCGGAGAGGCGTGGCGGACCCGAG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS GCA 90 bp CCCACACGTCCTCGGGTCCGCCACGCCTCTCCGGTGCCAGCCACGTaGTGCGCACTGCGGTGCGGCGCTCGACCGCGCGGGGCGCACTGG +
Preference number: 5 (lower is better)
Translates to: PTRPRVRHASPVPAT*CALRCGARPRGAHW
Trigger: CCAGTGCGCCCCGCGCGGTCGAGCGCCGCACCGCAGTGCGCAGCACGTGGCTGGCACCGGAGAGGCGTGGCGGACCCGAGGACGTGTGGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS GCA 90 bp ACACGTCCTCGGGTCCGCCACGCCTCTCCGGTGCCAGCCACGTGCTaGGCACTGCGGTGCGGCGCTCGACCGCGCGGGGCGCACTGGCCA +
Preference number: 5 (lower is better)
Translates to: TRPRVRHASPVPATC*ALRCGARPRGAHWP
Trigger: TGGCCAGTGCGCCCCGCGCGGTCGAGCGCCGCACCGCAGTGCGCAGCACGTGGCTGGCACCGGAGAGGCGTGGCGGACCCGAGGACGTGT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS GCA 90 bp GCTCGAGCTCAAGAGCGCGCCGCTCCTCCGAGCCTAAGCCGCCAGTaGCCACGGCGAAGCGCGCCCACACGTCCTCGGGTCCGCCACGCC +
Preference number: 5 (lower is better)
Translates to: ARAQERAAPPSLSRQ*PRRSAPTRPRVRHA
Trigger: GGCGTGGCGGACCCGAGGACGTGTGGGCGCGCTTCGCCGTGGGCACTGGCGGCTTAGGCTCGGAGGAGCGGCGCGCTCTTGAGCTCGAGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS GCA 90 bp GCGTCTCGCCCTCGGAAGCGCAGCGCGCCAGGTACAACAGAGTGGTaGCGCAGAACGCCAGGCCGCCTAGGCCCAGCGCCACCCGGTGCC +
Preference number: 5 (lower is better)
Translates to: ASRPRKRSAPGTTEW*RRTPGRLGPAPPGA
Trigger: GGCACCGGGTGGCGCTGGGCCTAGGCGGCCTGGCGTTCTGCGGCACCACTCTGTTGTACCTGGCGCGCTGCGCTTCCGAGGGCGAGACGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS CCA 90 bp AGGGCGTCTCGCCCTCGGAAGCGCAGCGCGCCAGGTACAACAGAGTaGTGCCGCAGAACGCCAGGCCGCCTAGGCCCAGCGCCACCCGGT +
Preference number: 5 (lower is better)
Translates to: RASRPRKRSAPGTTE*CRRTPGRLGPAPPG
Trigger: ACCGGGTGGCGCTGGGCCTAGGCGGCCTGGCGTTCTGCGGCACCACTCTGTTGTACCTGGCGCGCTGCGCTTCCGAGGGCGAGACGCCCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS TCA 90 bp AGTCGCAGAGTTGCCAGGCTGCTTCTCGCCAGCGACCTCCCGGCTTaGCGCGCCCGCGCCCGGAAAAGAAGCCCCAGTAGAGGCGCCGGC +
Preference number: 5 (lower is better)
Translates to: SRRVARLLLASDLPA*RARARKRSPSRGAG
Trigger: GCCGGCGCCTCTACTGGGGCTTCTTTTCCGGGCGCGGGCGCGTCAAGCCGGGAGGTCGCTGGCGAGAAGCAGCCTGGCAACTCTGCGACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS GCA 90 bp ACCGCCCAACGCGTAGGGCAGGTAGTAGTCGCAGAGTTGCCAGGCTaGTTCTCGCCAGCGACCTCCCGGCTTGACGCGCCCGCGCCCGGA +
Preference number: 5 (lower is better)
Translates to: TAQRVGQVVVAELPG*FSPATSRLDAPAPG
Trigger: TCCGGGCGCGGGCGCGTCAAGCCGGGAGGTCGCTGGCGAGAAGCAGCCTGGCAACTCTGCGACTACTACCTGCCCTACGCGTTGGGCGGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS GCA 90 bp AGCGTGGGTCGTGCTCCCGTTGCACATCCACTGGTGCCAGCCAGGTaGCCAGCGATACGTCTTCACTGTGCCACGCGCGCAGGTACTCGC +
Preference number: 5 (lower is better)
Translates to: SVGRAPVAHPLVPAR*PAIRLHCATRAGTR
Trigger: GCGAGTACCTGCGCGCGTGGCACAGTGAAGACGTATCGCTGGGCACCTGGCTGGCACCAGTGGATGTGCAACGGGAGCACGACCCACGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS GCA 90 bp CTCCGTGTCGAAGCGTGGGTCGTGCTCCCGTTGCACATCCACTGGTaGCAGCCAGGTGCCCAGCGATACGTCTTCACTGTGCCACGCGCG +
Preference number: 5 (lower is better)
Translates to: LRVEAWVVLPLHIHW*QPGAQRYVFTVPRA
Trigger: CGCGCGTGGCACAGTGAAGACGTATCGCTGGGCACCTGGCTGGCACCAGTGGATGTGCAACGGGAGCACGACCCACGCTTCGACACGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS CCA 90 bp GTACTCCGTGTCGAAGCGTGGGTCGTGCTCCCGTTGCACATCCACTaGTGCCAGCCAGGTGCCCAGCGATACGTCTTCACTGTGCCACGC +
Preference number: 5 (lower is better)
Translates to: VLRVEAWVVLPLHIH*CQPGAQRYVFTVPR
Trigger: GCGTGGCACAGTGAAGACGTATCGCTGGGCACCTGGCTGGCACCAGTGGATGTGCAACGGGAGCACGACCCACGCTTCGACACGGAGTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS TCA 90 bp CCAGCGATACGTCTTCACTGTGCCACGCGCGCAGGTACTCGCGGCTaGGGCGCAGGTAATGCACCAGGTCCGCAGAAAGGACATAGCCAC +
Preference number: 5 (lower is better)
Translates to: PAIRLHCATRAGTRG*GAGNAPGPQKGHSH
Trigger: GTGGCTATGTCCTTTCTGCGGACCTGGTGCATTACCTGCGCCTCAGCCGCGAGTACCTGCGCGCGTGGCACAGTGAAGACGTATCGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS GCA 90 bp CCTCGAGATTTGTACTCCGTGTCGAAGCGTGGGTCGTGCTCCCGTTaGACATCCACTGGTGCCAGCCAGGTGCCCAGCGATACGTCTTCA +
Preference number: 5 (lower is better)
Translates to: PRDLYSVSKRGSCSR*TSTGASQVPSDTSS
Trigger: TGAAGACGTATCGCTGGGCACCTGGCTGGCACCAGTGGATGTGCAACGGGAGCACGACCCACGCTTCGACACGGAGTACAAATCTCGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS GCA 90 bp TTGTTGCAGCCTCGAGATTTGTACTCCGTGTCGAAGCGTGGGTCGTaGTCCCGTTGCACATCCACTGGTGCCAGCCAGGTGCCCAGCGAT +
Preference number: 5 (lower is better)
Translates to: LLQPRDLYSVSKRGS*SRCTSTGASQVPSD
Trigger: ATCGCTGGGCACCTGGCTGGCACCAGTGGATGTGCAACGGGAGCACGACCCACGCTTCGACACGGAGTACAAATCTCGAGGCTGCAACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS TCA 90 bp TCAGGGAACGCCCTCCTTGCGCTGGCAGCACTGGGAGGGTGGAGCTaGCCAGTCATAGACATAGGAAAGGCGCAACTGCACCTCATGCTT +
Preference number: 5 (lower is better)
Translates to: SGNALLALAALGGWS*PVIDIGKAQLHLML
Trigger: AAGCATGAGGTGCAGTTGCGCCTTTCCTATGTCTATGACTGGTCAGCTCCACCCTCCCAGTGCTGCCAGCGCAAGGAGGGCGTTCCCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS CCA 90 bp ATACTGATTGTTGCAGCCTCGAGATTTGTACTCCGTGTCGAAGCGTaGGTCGTGCTCCCGTTGCACATCCACTGGTGCCAGCCAGGTGCC +
Preference number: 5 (lower is better)
Translates to: ILIVAASRFVLRVEA*VVLPLHIHWCQPGA
Trigger: GGCACCTGGCTGGCACCAGTGGATGTGCAACGGGAGCACGACCCACGCTTCGACACGGAGTACAAATCTCGAGGCTGCAACAATCAGTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS-3UTR CAA 90 bp TCAGCCCAGATCATTTATCAGATTGTTCAGGATGCTTGGCCTGTGTCAGGAGAGTGGGTCGTGCTCCCGTaGCACATCCACTGGTGCCAG +
Preference number: 5 (lower is better)
Translates to: SAQIIYQIVQDAWPVSGEWVVLP*HIHWCQ
Trigger: CTGGCACCAGTGGATGTGCAACGGGAGCACGACCCA...CTCTCCTGACACAGGCCAAGCATCCTGAACAATCTGATAAATGATCTGGGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS GCA 90 bp TGCACCTCATGCTTGCACAACCGGCCCTCATGCAGCAACATCTGTTaGTTCTCCAACATGTCCTCTGGGCTTTGCTTGTGTGTCACCAGA +
Preference number: 5 (lower is better)
Translates to: CTSCLHNRPSCSNIC*FSNMSSGLCLCVTR
Trigger: TCTGGTGACACACAAGCAAAGCCCAGAGGACATGTTGGAGAAGCAACAGATGTTGCTGCATGAGGGCCGGTTGTGCAAGCATGAGGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS CCA 90 bp CCGGCCCTCATGCAGCAACATCTGTTGCTTCTCCAACATGTCCTCTaGGCTTTGCTTGTGTGTCACCAGATACTGATTGTTGCAGCCTCG +
Preference number: 5 (lower is better)
Translates to: PALMQQHLLLLQHVL*ALLVCHQILIVAAS
Trigger: CGAGGCTGCAACAATCAGTATCTGGTGACACACAAGCAAAGCCCAGAGGACATGTTGGAGAAGCAACAGATGTTGCTGCATGAGGGCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS-3UTR CAA 90 bp TGCTTACACTCTCAAGGACCTCCTTGGAGTCGGCCACAATTGATAACTGAAGGCGTAGTAGTCGCAGAGTaGCCAGGCTGCTTCTCGCCA +
Preference number: 5 (lower is better)
Translates to: CLHSQGPPWSRPQLITEGVVVAE*PGCFSP
Trigger: TGGCGAGAAGCAGCCTGGCAACTCTGCGACTACTAC...GCCTTCAGTTATCAATTGTGGCCGACTCCAAGGAGGTCCTTGAGAGTGTAAGCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS GCA 90 bp ACATGTCCTCTGGGCTTTGCTTGTGTGTCACCAGATACTGATTGTTaGAGCCTCGAGATTTGTACTCCGTGTCGAAGCGTGGGTCGTGCT +
Preference number: 5 (lower is better)
Translates to: TCPLGFACVSPDTDC*SLEICTPCRSVGRA
Trigger: AGCACGACCCACGCTTCGACACGGAGTACAAATCTCGAGGCTGCAACAATCAGTATCTGGTGACACACAAGCAAAGCCCAGAGGACATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS GCA 90 bp CTGACCAGTCATAGACATAGGAAAGGCGCAACTGCACCTCATGCTTaGACAACCGGCCCTCATGCAGCAACATCTGTTGCTTCTCCAACA +
Preference number: 5 (lower is better)
Translates to: LTSHRHRKGATAPHA*TTGPHAATSVASPT
Trigger: TGTTGGAGAAGCAACAGATGTTGCTGCATGAGGGCCGGTTGTGCAAGCATGAGGTGCAGTTGCGCCTTTCCTATGTCTATGACTGGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS-3UTR CAA 90 bp CCAAGTGCCTTACAGTCCATACGCTCACACACCCTGAAAAGCTTTAAAAGTCATGAGTCGTCGTCCGCCTaGAGCACGAACTCGAAGTCC +
Preference number: 5 (lower is better)
Translates to: PSALQSIRSHTLKSFKSHESSSA*STNSKS
Trigger: GGACTTCGAGTTCGTGCTCAAGGCGGACGACGACTC...ATGACTTTTAAAGCTTTTCAGGGTGTGTGAGCGTATGGACTGTAAGGCACTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS GCA 72 bp GCCACGCCTCTCCGGTGCCAGCCACGTGCTGCGCACTaGGGTGCGGCGCTCGACCGCGCGGGGCGCACTGGC +
Preference number: 6 (lower is better)
Translates to: ATPLRCQPRAAH*GAALDRAGRTG
Trigger: GCCAGTGCGCCCCGCGCGGTCGAGCGCCGCACCGCAGTGCGCAGCACGTGGCTGGCACCGGAGAGGCGTGGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS GCA 72 bp CCTCGGGTCCGCCACGCCTCTCCGGTGCCAGCCACGTaGTGCGCACTGCGGTGCGGCGCTCGACCGCGCGGG +
Preference number: 6 (lower is better)
Translates to: PRVRHASPVPAT*CALRCGARPRG
Trigger: CCCGCGCGGTCGAGCGCCGCACCGCAGTGCGCAGCACGTGGCTGGCACCGGAGAGGCGTGGCGGACCCGAGG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS GCA 72 bp GCCTCTCCGGTGCCAGCCACGTGCTGCGCACTGCGGTaGGGCGCTCGACCGCGCGGGGCGCACTGGCCACCA +
Preference number: 6 (lower is better)
Translates to: ASPVPATCCALR*GARPRGAHWPP
Trigger: TGGTGGCCAGTGCGCCCCGCGCGGTCGAGCGCCGCACCGCAGTGCGCAGCACGTGGCTGGCACCGGAGAGGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS GCA 72 bp GCGTCGCGCAGGGCGGGCAGCAGCAGCAGGTCCCCGTaGTGCGCCTGCTCGAGCTCAAGAGCGCGCCGCTCC +
Preference number: 6 (lower is better)
Translates to: ASRRAGSSSRSP*CACSSSRARRS
Trigger: GGAGCGGCGCGCTCTTGAGCTCGAGCAGGCGCAGCACGGGGACCTGCTGCTGCTGCCCGCCCTGCGCGACGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS GCA 72 bp TCGCGCAGGGCGGGCAGCAGCAGCAGGTCCCCGTGCTaGGCCTGCTCGAGCTCAAGAGCGCGCCGCTCCTCC +
Preference number: 6 (lower is better)
Translates to: SRRAGSSSRSPC*ACSSSRARRSS
Trigger: GGAGGAGCGGCGCGCTCTTGAGCTCGAGCAGGCGCAGCACGGGGACCTGCTGCTGCTGCCCGCCCTGCGCGA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS GCA 72 bp CAAGAGCGCGCCGCTCCTCCGAGCCTAAGCCGCCAGTaGCCACGGCGAAGCGCGCCCACACGTCCTCGGGTC +
Preference number: 6 (lower is better)
Translates to: QERAAPPSLSRQ*PRRSAPTRPRV
Trigger: GACCCGAGGACGTGTGGGCGCGCTTCGCCGTGGGCACTGGCGGCTTAGGCTCGGAGGAGCGGCGCGCTCTTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS CCA 72 bp CGCCCTCGGAAGCGCAGCGCGCCAGGTACAACAGAGTaGTGCCGCAGAACGCCAGGCCGCCTAGGCCCAGCG +
Preference number: 6 (lower is better)
Translates to: RPRKRSAPGTTE*CRRTPGRLGPA
Trigger: CGCTGGGCCTAGGCGGCCTGGCGTTCTGCGGCACCACTCTGTTGTACCTGGCGCGCTGCGCTTCCGAGGGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS GCA 72 bp CCTCGGAAGCGCAGCGCGCCAGGTACAACAGAGTGGTaGCGCAGAACGCCAGGCCGCCTAGGCCCAGCGCCA +
Preference number: 6 (lower is better)
Translates to: PRKRSAPGTTEW*RRTPGRLGPAP
Trigger: TGGCGCTGGGCCTAGGCGGCCTGGCGTTCTGCGGCACCACTCTGTTGTACCTGGCGCGCTGCGCTTCCGAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS GCA 72 bp GGTGCCAGCCAGGTGCCCAGCGATACGTCTTCACTGTaGCACGCGCGCAGGTACTCGCGGCTGAGGCGCAGG +
Preference number: 6 (lower is better)
Translates to: GASQVPSDTSSL*HARRYSRLRRR
Trigger: CCTGCGCCTCAGCCGCGAGTACCTGCGCGCGTGGCACAGTGAAGACGTATCGCTGGGCACCTGGCTGGCACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS TCA 72 bp CATCCAGCCAGGTCAGCATGGCCAGGACCTTGGCCGTaGGGTTCTCGTAGGCGTCGCGCAGGGCGGGCAGCA +
Preference number: 6 (lower is better)
Translates to: HPARSAWPGPWP*GSRRRRAGRAA
Trigger: TGCTGCCCGCCCTGCGCGACGCCTACGAGAACCTCACGGCCAAGGTCCTGGCCATGCTGACCTGGCTGGATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS TCA 72 bp GTTGCCAGGCTGCTTCTCGCCAGCGACCTCCCGGCTTaGCGCGCCCGCGCCCGGAAAAGAAGCCCCAGTAGA +
Preference number: 6 (lower is better)
Translates to: VARLLLASDLPA*RARARKRSPSR
Trigger: TCTACTGGGGCTTCTTTTCCGGGCGCGGGCGCGTCAAGCCGGGAGGTCGCTGGCGAGAAGCAGCCTGGCAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS GCA 72 bp CGCGTAGGGCAGGTAGTAGTCGCAGAGTTGCCAGGCTaGTTCTCGCCAGCGACCTCCCGGCTTGACGCGCCC +
Preference number: 6 (lower is better)
Translates to: RVGQVVVAELPG*FSPATSRLDAP
Trigger: GGGCGCGTCAAGCCGGGAGGTCGCTGGCGAGAAGCAGCCTGGCAACTCTGCGACTACTACCTGCCCTACGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS CAA 90 bp GACATAGCCACCGCCCAACGCGTAGGGCAGGTAGTAGTCGCAGAGTaGCCAGGCTGCTTCTCGCCAGCGACCTCCCGGCTTGACGCGCCC +
Preference number: 6 (lower is better)
Translates to: DIATAQRVGQVVVAE*PGCFSPATSRLDAP
Trigger: GGGCGCGTCAAGCCGGGAGGTCGCTGGCGAGAAGCAGCCTGGCAACTCTGCGACTACTACCTGCCCTACGCGTTGGGCGGTGGCTATGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS CAA 72 bp ACCGCCCAACGCGTAGGGCAGGTAGTAGTCGCAGAGTaGCCAGGCTGCTTCTCGCCAGCGACCTCCCGGCTT +
Preference number: 6 (lower is better)
Translates to: TAQRVGQVVVAE*PGCFSPATSRL
Trigger: AAGCCGGGAGGTCGCTGGCGAGAAGCAGCCTGGCAACTCTGCGACTACTACCTGCCCTACGCGTTGGGCGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS CAA 90 bp TCCACCAGGATAGCGTCCAGGCGCGCAAAGGAGTCGTCGTCCGCCTaGAGCACGAACTCGAAGTCCACGCGCTCATCCAGCCAGGTCAGC +
Preference number: 6 (lower is better)
Translates to: STRIASRRAKESSSA*STNSKSTRSSSQVS
Trigger: GCTGACCTGGCTGGATGAGCGCGTGGACTTCGAGTTCGTGCTCAAGGCGGACGACGACTCCTTTGCGCGCCTGGACGCTATCCTGGTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS GCA 72 bp GAAGCGTGGGTCGTGCTCCCGTTGCACATCCACTGGTaGCAGCCAGGTGCCCAGCGATACGTCTTCACTGTG +
Preference number: 6 (lower is better)
Translates to: EAWVVLPLHIHW*QPGAQRYVFTV
Trigger: CACAGTGAAGACGTATCGCTGGGCACCTGGCTGGCACCAGTGGATGTGCAACGGGAGCACGACCCACGCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS GCA 72 bp TTGTACTCCGTGTCGAAGCGTGGGTCGTGCTCCCGTTaGACATCCACTGGTGCCAGCCAGGTGCCCAGCGAT +
Preference number: 6 (lower is better)
Translates to: LYSVSKRGSCSR*TSTGASQVPSD
Trigger: ATCGCTGGGCACCTGGCTGGCACCAGTGGATGTGCAACGGGAGCACGACCCACGCTTCGACACGGAGTACAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS CCA 72 bp GTCGAAGCGTGGGTCGTGCTCCCGTTGCACATCCACTaGTGCCAGCCAGGTGCCCAGCGATACGTCTTCACT +
Preference number: 6 (lower is better)
Translates to: VEAWVVLPLHIH*CQPGAQRYVFT
Trigger: AGTGAAGACGTATCGCTGGGCACCTGGCTGGCACCAGTGGATGTGCAACGGGAGCACGACCCACGCTTCGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS CAA 72 bp ATAGCGTCCAGGCGCGCAAAGGAGTCGTCGTCCGCCTaGAGCACGAACTCGAAGTCCACGCGCTCATCCAGC +
Preference number: 6 (lower is better)
Translates to: IASRRAKESSSA*STNSKSTRSSS
Trigger: GCTGGATGAGCGCGTGGACTTCGAGTTCGTGCTCAAGGCGGACGACGACTCCTTTGCGCGCCTGGACGCTAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS CAA 72 bp TTTGTACTCCGTGTCGAAGCGTGGGTCGTGCTCCCGTaGCACATCCACTGGTGCCAGCCAGGTGCCCAGCGA +
Preference number: 6 (lower is better)
Translates to: FVLRVEAWVVLP*HIHWCQPGAQR
Trigger: TCGCTGGGCACCTGGCTGGCACCAGTGGATGTGCAACGGGAGCACGACCCACGCTTCGACACGGAGTACAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS CAA 90 bp GCCTCGAGATTTGTACTCCGTGTCGAAGCGTGGGTCGTGCTCCCGTaGCACATCCACTGGTGCCAGCCAGGTGCCCAGCGATACGTCTTC +
Preference number: 6 (lower is better)
Translates to: ASRFVLRVEAWVVLP*HIHWCQPGAQRYVF
Trigger: GAAGACGTATCGCTGGGCACCTGGCTGGCACCAGTGGATGTGCAACGGGAGCACGACCCACGCTTCGACACGGAGTACAAATCTCGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS GCA 72 bp CCTCGAGATTTGTACTCCGTGTCGAAGCGTGGGTCGTaGTCCCGTTGCACATCCACTGGTGCCAGCCAGGTG +
Preference number: 6 (lower is better)
Translates to: PRDLYSVSKRGS*SRCTSTGASQV
Trigger: CACCTGGCTGGCACCAGTGGATGTGCAACGGGAGCACGACCCACGCTTCGACACGGAGTACAAATCTCGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS CCA 72 bp GTTGCAGCCTCGAGATTTGTACTCCGTGTCGAAGCGTaGGTCGTGCTCCCGTTGCACATCCACTGGTGCCAG +
Preference number: 6 (lower is better)
Translates to: VAASRFVLRVEA*VVLPLHIHWCQ
Trigger: CTGGCACCAGTGGATGTGCAACGGGAGCACGACCCACGCTTCGACACGGAGTACAAATCTCGAGGCTGCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS GCA 72 bp TGCTTGCACAACCGGCCCTCATGCAGCAACATCTGTTaGTTCTCCAACATGTCCTCTGGGCTTTGCTTGTGT +
Preference number: 6 (lower is better)
Translates to: CLHNRPSCSNIC*FSNMSSGLCLC
Trigger: ACACAAGCAAAGCCCAGAGGACATGTTGGAGAAGCAACAGATGTTGCTGCATGAGGGCCGGTTGTGCAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS GCA 72 bp CATAGACATAGGAAAGGCGCAACTGCACCTCATGCTTaGACAACCGGCCCTCATGCAGCAACATCTGTTGCT +
Preference number: 6 (lower is better)
Translates to: HRHRKGATAPHA*TTGPHAATSVA
Trigger: AGCAACAGATGTTGCTGCATGAGGGCCGGTTGTGCAAGCATGAGGTGCAGTTGCGCCTTTCCTATGTCTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS GCA 72 bp CTGGGCTTTGCTTGTGTGTCACCAGATACTGATTGTTaGAGCCTCGAGATTTGTACTCCGTGTCGAAGCGTG +
Preference number: 6 (lower is better)
Translates to: LGFACVSPDTDC*SLEICTPCRSV
Trigger: CACGCTTCGACACGGAGTACAAATCTCGAGGCTGCAACAATCAGTATCTGGTGACACACAAGCAAAGCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5
CDS CAA 72 bp CAACATCTGTTGCTTCTCCAACATGTCCTCTGGGCTTaGCTTGTGTGTCACCAGATACTGATTGTTGCAGCC +
Preference number: 6 (lower is better)
Translates to: QHLLLLQHVLWA*LVCHQILIVAA
Trigger: GGCTGCAACAATCAGTATCTGGTGACACACAAGCAAAGCCCAGAGGACATGTTGGAGAAGCAACAGATGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052185.5