Pregenerated sensors for B3GALT4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000067370Ensembl transcript IDs: ENSMUST00000087543.5
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTTTATTGGACCCTTGTCCCTGCTTGTGAGTCCCCTTCCCGCCCTTaGCTTTATCCCTCCCCGGAGCTGGCAGGCCAGGGCCCAAGTTTA | + |
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Preference number: 1 (lower is better) Translates to: VYWTLVPACESPSRP*LYPSPELAGQGPSL Trigger: TAAACTTGGGCCCTGGCCTGCCAGCTCCGGGGAGGGATAAAGCCAAGGGCGGGAAGGGGACTCACAAGCAGGGACAAGGGTCCAATAAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| 3UTR CCA 90 bp | CTTGTGAGTCCCCTTCCCGCCCTTGGCTTTATCCCTCCCCGGAGCTaGCAGGCCAGGGCCCAAGTTTATCTTGGTAAACTTGGTTGGTTG | + |
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Preference number: 1 (lower is better) Translates to: LVSPLPALGFIPPRS*QARAQVYLGKLGWL Trigger: CAACCAACCAAGTTTACCAAGATAAACTTGGGCCCTGGCCTGCCAGCTCCGGGGAGGGATAAAGCCAAGGGCGGGAAGGGGACTCACAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| 3UTR GCA 90 bp | GCTGGCAGGCCAGGGCCCAAGTTTATCTTGGTAAACTTGGTTGGTTaGAGCTTCAGAGTTTGCTGTGAGAAAATGGAGGAACTAGATCAC | + |
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Preference number: 1 (lower is better) Translates to: AGRPGPKFILVNLVG*SFRVCCEKMEELDH Trigger: GTGATCTAGTTCCTCCATTTTCTCACAGCAAACTCTGAAGCTGCAACCAACCAAGTTTACCAAGATAAACTTGGGCCCTGGCCTGCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| 3UTR TCA 90 bp | GTTTATCTTGGTAAACTTGGTTGGTTGCAGCTTCAGAGTTTGCTGTaGGAAAATGGAGGAACTAGATCACCACAGGGATCTGCAGCCTCT | + |
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Preference number: 1 (lower is better) Translates to: VYLGKLGWLQLQSLL*ENGGTRSPQGSAAS Trigger: AGAGGCTGCAGATCCCTGTGGTGATCTAGTTCCTCCATTTTCTCACAGCAAACTCTGAAGCTGCAACCAACCAAGTTTACCAAGATAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| 3UTR-3UTR GCA 90 bp | GCCCTTGGCTTTATCCCTCCCCGGAGCTGGCAGGCCAGGGCCCAAGTTTATCTTATCACCACAGGGATCTaGAGCCTCTGCACCAACTTT | + |
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Preference number: 2 (lower is better) Translates to: ALGFIPPRSWQARAQVYLITTGI*SLCTNF Trigger: AAAGTTGGTGCAGAGGCTGCAGATCCCTGTGGTGAT...AAGATAAACTTGGGCCCTGGCCTGCCAGCTCCGGGGAGGGATAAAGCCAAGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| 3UTR-3UTR GCA 90 bp | CTTGTCCCTGCTTGTGAGTCCCCTTCCCGCCCTTGGCTTTATCCCTCCCCGGAGTGCAGCTTCAGAGTTTaGTGTGAGAAAATGGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: LVPACESPSRPWLYPSPECSFRV*CEKMEE Trigger: TTCCTCCATTTTCTCACAGCAAACTCTGAAGCTGCA...CTCCGGGGAGGGATAAAGCCAAGGGCGGGAAGGGGACTCACAAGCAGGGACAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| 3UTR CAA 90 bp | GCTTTATCCCTCCCCGGAGCTGGCAGGCCAGGGCCCAAGTTTATCTaGGTAAACTTGGTTGGTTGCAGCTTCAGAGTTTGCTGTGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: ALSLPGAGRPGPKFI*VNLVGCSFRVCCEK Trigger: TTTCTCACAGCAAACTCTGAAGCTGCAACCAACCAAGTTTACCAAGATAAACTTGGGCCCTGGCCTGCCAGCTCCGGGGAGGGATAAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| 3UTR TCA 72 bp | AGAGAGACATGTTTATTGGACCCTTGTCCCTGCTTGTaGGTCCCCTTCCCGCCCTTGGCTTTATCCCTCCCC | + |
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Preference number: 3 (lower is better) Translates to: RETCLLDPCPCL*VPFPPLALSLP Trigger: GGGGAGGGATAAAGCCAAGGGCGGGAAGGGGACTCACAAGCAGGGACAAGGGTCCAATAAACATGTCTCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| 3UTR CCA 72 bp | GATCACCACAGGGATCTGCAGCCTCTGCACCAACTTTaGGGAAAGGTCTCTGAGGTGCTGTTTTCTGTGGGT | + |
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Preference number: 3 (lower is better) Translates to: DHHRDLQPLHQL*GKVSEVLFSVG Trigger: ACCCACAGAAAACAGCACCTCAGAGACCTTTCCCCAAAGTTGGTGCAGAGGCTGCAGATCCCTGTGGTGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| 3UTR TCA 72 bp | GGTAAACTTGGTTGGTTGCAGCTTCAGAGTTTGCTGTaGGAAAATGGAGGAACTAGATCACCACAGGGATCT | + |
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Preference number: 3 (lower is better) Translates to: GKLGWLQLQSLL*ENGGTRSPQGS Trigger: AGATCCCTGTGGTGATCTAGTTCCTCCATTTTCTCACAGCAAACTCTGAAGCTGCAACCAACCAAGTTTACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| 3UTR GCA 72 bp | CCAGGGCCCAAGTTTATCTTGGTAAACTTGGTTGGTTaGAGCTTCAGAGTTTGCTGTGAGAAAATGGAGGAA | + |
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Preference number: 3 (lower is better) Translates to: PGPKFILVNLVG*SFRVCCEKMEE Trigger: TTCCTCCATTTTCTCACAGCAAACTCTGAAGCTGCAACCAACCAAGTTTACCAAGATAAACTTGGGCCCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| 3UTR GCA 72 bp | ATCTTGGTAAACTTGGTTGGTTGCAGCTTCAGAGTTTaGTGTGAGAAAATGGAGGAACTAGATCACCACAGG | + |
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Preference number: 3 (lower is better) Translates to: ILVNLVGCSFRV*CEKMEELDHHR Trigger: CCTGTGGTGATCTAGTTCCTCCATTTTCTCACAGCAAACTCTGAAGCTGCAACCAACCAAGTTTACCAAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| CDS-3UTR TCA 90 bp | CGCCCTTGGCTTTATCCCTCCCCGGAGCTGGCAGGCCAGGGCCCAAGTTTATCTCCGTACACACCAGGATaGGCAGGAAGGGAGGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: RPWLYPSPELAGQGPSLSPYTPG*AGREGV Trigger: GACCCCCTCCCTTCCTGCTCATCCTGGTGTGTACGG...AGATAAACTTGGGCCCTGGCCTGCCAGCTCCGGGGAGGGATAAAGCCAAGGGCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| CDS-3UTR CCA 90 bp | CCTGCTTGTGAGTCCCCTTCCCGCCCTTGGCTTTATCCCTCCCCGGAGCTGGCACGAATGGCGTTTCTCTaGTTCAGGTGCTCCGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: PACESPSRPWLYPSPELARMAFL*FRCSGA Trigger: GGCCCCGGAGCACCTGAACCAGAGAAACGCCATTCG...TGCCAGCTCCGGGGAGGGATAAAGCCAAGGGCGGGAAGGGGACTCACAAGCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| CDS-3UTR GCA 90 bp | CCGCCCTTGGCTTTATCCCTCCCCGGAGCTGGCAGGCCAGGGCCCAAGTTTATCTTTCTCTGGTTCAGGTaGTCCGGGGCCGTACACACC | + |
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Preference number: 4 (lower is better) Translates to: PPLALSLPGAGRPGPKFIFLWFR*SGAVHT Trigger: GGTGTGTACGGCCCCGGAGCACCTGAACCAGAGAAA...GATAAACTTGGGCCCTGGCCTGCCAGCTCCGGGGAGGGATAAAGCCAAGGGCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| CDS-3UTR GCA 90 bp | CGCCCTTGGCTTTATCCCTCCCCGGAGCTGGCAGGCCAGGGCCCAAGTTTATCTGCCTCTTTGCCCTTCTaGCATTGCTCCGAAGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: RPWLYPSPELAGQGPSLSASLPF*HCSEGP Trigger: GGGGCCTTCGGAGCAATGGCAGAAGGGCAAAGAGGC...AGATAAACTTGGGCCCTGGCCTGCCAGCTCCGGGGAGGGATAAAGCCAAGGGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| CDS-3UTR GCA 90 bp | CCTGCTTGTGAGTCCCCTTCCCGCCCTTGGCTTTATCCCTCCCCGGAGCTGGCAGATGGCACCCCAAGATaGCCGAATGGCGTTTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: PACESPSRPWLYPSPELADGTPR*PNGVSL Trigger: CAGAGAAACGCCATTCGGGCATCTTGGGGTGCCATC...TGCCAGCTCCGGGGAGGGATAAAGCCAAGGGCGGGAAGGGGACTCACAAGCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| CDS-3UTR GCA 90 bp | CCGCCCTTGGCTTTATCCCTCCCCGGAGCTGGCAGGCCAGGGCCCAAGTTTATCACCTTCAGGATGAGCTaGACAGCAGAGATGGACAGT | + |
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Preference number: 4 (lower is better) Translates to: PPLALSLPGAGRPGPKFITFRMS*TAEMDS Trigger: ACTGTCCATCTCTGCTGTGCAGCTCATCCTGAAGGT...GATAAACTTGGGCCCTGGCCTGCCAGCTCCGGGGAGGGATAAAGCCAAGGGCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| CDS-3UTR CCA 90 bp | CCCGGAGCTGGCAGGCCAGGGCCCAAGTTTATCTTGGTAAACTTGGTTGGTTGCATGGTGCCGGGACTCTaGTGTCCGAGTGGGTCTCAC | + |
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Preference number: 4 (lower is better) Translates to: PGAGRPGPKFILVNLVGCMVPGL*CPSGSH Trigger: GTGAGACCCACTCGGACACCAGAGTCCCGGCACCAT...GCAACCAACCAAGTTTACCAAGATAAACTTGGGCCCTGGCCTGCCAGCTCCGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| CDS-3UTR GCA 90 bp | ACCCTTGTCCCTGCTTGTGAGTCCCCTTCCCGCCCTTGGCTTTATCCCTCCCCGACTGCCTGGCCTCTGTaGTCTTCATGGATAGCTGTT | + |
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Preference number: 4 (lower is better) Translates to: TLVPACESPSRPWLYPSPTAWPL*SSWIAV Trigger: AACAGCTATCCATGAAGAGCACAGAGGCCAGGCAGT...CGGGGAGGGATAAAGCCAAGGGCGGGAAGGGGACTCACAAGCAGGGACAAGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| CDS-3UTR CCA 90 bp | TCCCTCCCCGGAGCTGGCAGGCCAGGGCCCAAGTTTATCTTGGTAAACTTGGTTAGAAGGGGCACTGCCTaGCCTCTGTGCTCTTCATGG | + |
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Preference number: 4 (lower is better) Translates to: SLPGAGRPGPKFILVNLVRRGTA*PLCSSW Trigger: CCATGAAGAGCACAGAGGCCAGGCAGTGCCCCTTCT...AACCAAGTTTACCAAGATAAACTTGGGCCCTGGCCTGCCAGCTCCGGGGAGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| CDS-3UTR CCA 90 bp | GCCCTTGGCTTTATCCCTCCCCGGAGCTGGCAGGCCAGGGCCCAAGTTTATCTTCAGGGATCCACCTTGTaGGATGTCAGCAGGAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: ALGFIPPRSWQARAQVYLQGSTL*DVSRNF Trigger: GAAGTTCCTGCTGACATCCCACAAGGTGGATCCCTG...AAGATAAACTTGGGCCCTGGCCTGCCAGCTCCGGGGAGGGATAAAGCCAAGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| CDS-3UTR GCA 90 bp | GATCACCACAGGGATCTGCAGCCTCTGCACCAACTTTGGGGAAAGGTCTCTGAGCTTCCTGGGCCTCTTTaGCCTTCTGCCATTGCTCCG | + |
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Preference number: 4 (lower is better) Translates to: DHHRDLQPLHQLWGKVSELPGPL*PSAIAP Trigger: CGGAGCAATGGCAGAAGGGCAAAGAGGCCCAGGAAG...CTCAGAGACCTTTCCCCAAAGTTGGTGCAGAGGCTGCAGATCCCTGTGGTGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| CDS-3UTR GCA 90 bp | CACCACAGGGATCTGCAGCCTCTGCACCAACTTTGGGGAAAGGTCTCTGAGGTGATACAGAAGGGGCACTaGCTGGCCTCTGTGCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: HHRDLQPLHQLWGKVSEVIQKGH*LASVLF Trigger: GAAGAGCACAGAGGCCAGGCAGTGCCCCTTCTGTAT...CACCTCAGAGACCTTTCCCCAAAGTTGGTGCAGAGGCTGCAGATCCCTGTGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| CDS-3UTR GCA 90 bp | CCCGGAGCTGGCAGGCCAGGGCCCAAGTTTATCTTGGTAAACTTGGTTGGTTGCCCCTCCAGTGCACCCTaGCTAAATACAGAAGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: PGAGRPGPKFILVNLVGCPSSAP*LNTEGA Trigger: TGCCCCTTCTGTATTTAGGCAGGGTGCACTGGAGGG...GCAACCAACCAAGTTTACCAAGATAAACTTGGGCCCTGGCCTGCCAGCTCCGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| CDS-3UTR GCA 90 bp | GCCCTTGGCTTTATCCCTCCCCGGAGCTGGCAGGCCAGGGCCCAAGTTTATCTTACAGTACATATCCTGTaGCCGAGGCATAGGGTGGAA | + |
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Preference number: 4 (lower is better) Translates to: ALGFIPPRSWQARAQVYLTVHIL*PRHRVE Trigger: TTCCACCCTATGCCTCGGGCACAGGATATGTACTGT...AAGATAAACTTGGGCCCTGGCCTGCCAGCTCCGGGGAGGGATAAAGCCAAGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| CDS-3UTR GCA 90 bp | GGGCCCAAGTTTATCTTGGTAAACTTGGTTGGTTGCAGCTTCAGAGTTTGCTGTGGCCGGCAGCAGGGATaGCAGGGACAGGCTCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: GPKFILVNLVGCSFRVCCGRQQG*QGQAQQ Trigger: CTGCTGAGCCTGTCCCTGGCATCCCTGCTGCCGGCC...ACAGCAAACTCTGAAGCTGCAACCAACCAAGTTTACCAAGATAAACTTGGGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| 3UTR CAA 72 bp | CTCCCCGGAGCTGGCAGGCCAGGGCCCAAGTTTATCTaGGTAAACTTGGTTGGTTGCAGCTTCAGAGTTTGC | + |
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Preference number: 4 (lower is better) Translates to: LPGAGRPGPKFI*VNLVGCSFRVC Trigger: GCAAACTCTGAAGCTGCAACCAACCAAGTTTACCAAGATAAACTTGGGCCCTGGCCTGCCAGCTCCGGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| CDS-3UTR CCA 90 bp | GGAGCTGGCAGGCCAGGGCCCAAGTTTATCTTGGTAAACTTGGTTGGTTGCAGCCCCAAGATGCCCGAATaGCGTTTCTCTGGTTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: GAGRPGPKFILVNLVGCSPKMPE*RFSGSG Trigger: ACCTGAACCAGAGAAACGCCATTCGGGCATCTTGGG...GCTGCAACCAACCAAGTTTACCAAGATAAACTTGGGCCCTGGCCTGCCAGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| CDS-3UTR TCA 90 bp | GGAGCTGGCAGGCCAGGGCCCAAGTTTATCTTGGTAAACTTGGTTGGTTGCAGCTCTTTGTATCAGCTCTaGCACCAGCTCTGGGACGTT | + |
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Preference number: 4 (lower is better) Translates to: GAGRPGPKFILVNLVGCSSLYQL*HQLWDV Trigger: AACGTCCCAGAGCTGGTGTCAGAGCTGATACAAAGA...GCTGCAACCAACCAAGTTTACCAAGATAAACTTGGGCCCTGGCCTGCCAGCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| CDS-3UTR GCA 90 bp | CAGGCCAGGGCCCAAGTTTATCTTGGTAAACTTGGTTGGTTGCAGCTTCAGAGTAAGGCCCCCTCGCCTTaGACTTACTCCCACAAAGAC | + |
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Preference number: 4 (lower is better) Translates to: QARAQVYLGKLGWLQLQSKAPSP*TYSHKD Trigger: GTCTTTGTGGGAGTAAGTGCAAGGCGAGGGGGCCTT...ACTCTGAAGCTGCAACCAACCAAGTTTACCAAGATAAACTTGGGCCCTGGCCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| 3UTR CAA 72 bp | GCTGGCAGGCCAGGGCCCAAGTTTATCTTGGTAAACTaGGTTGGTTGCAGCTTCAGAGTTTGCTGTGAGAAA | + |
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Preference number: 4 (lower is better) Translates to: AGRPGPKFILVN*VGCSFRVCCEK Trigger: TTTCTCACAGCAAACTCTGAAGCTGCAACCAACCAAGTTTACCAAGATAAACTTGGGCCCTGGCCTGCCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| CDS CCA 90 bp | AGAAATCAAGAGGCGGGGCAGGGCGAGGGGCGGTCCTGGCGAGGCTaGGGCCGGCAGCAGGGATGCCAGGGACAGGCTCAGCAGCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: RNQEAGQGEGRSWRG*GRQQGCQGQAQQLL Trigger: GAGGAGCTGCTGAGCCTGTCCCTGGCATCCCTGCTGCCGGCCCCAGCCTCGCCAGGACCGCCCCTCGCCCTGCCCCGCCTCTTGATTTCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| CDS TCA 90 bp | TGGCGTTTCTCTGGTTCAGGTGCTCCGGGGCCGTACACACCAGGATaGGCAGGAAGGGAGGGGGTCCGGAGCCACCACAGGCATGAGAGT | + |
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Preference number: 5 (lower is better) Translates to: WRFSGSGAPGPYTPG*AGREGVRSHHRHES Trigger: ACTCTCATGCCTGTGGTGGCTCCGGACCCCCTCCCTTCCTGCTCATCCTGGTGTGTACGGCCCCGGAGCACCTGAACCAGAGAAACGCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| CDS CCA 90 bp | CGGGCTTCGCGGATGGCACCCCAAGATGCCCGAATGGCGTTTCTCTaGTTCAGGTGCTCCGGGGCCGTACACACCAGGATGAGCAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: RASRMAPQDARMAFL*FRCSGAVHTRMSRK Trigger: CTTCCTGCTCATCCTGGTGTGTACGGCCCCGGAGCACCTGAACCAGAGAAACGCCATTCGGGCATCTTGGGGTGCCATCCGCGAAGCCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| CDS TCA 90 bp | TCAGCAGCTCCTCCCCCAAGCCTGAAGGTCCAAACAGGGTCCAGATaGTCACCAGTAGTAGGACCGCCAGGAGGACGCGCCGGAAGAGGC | + |
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Preference number: 5 (lower is better) Translates to: SAAPPPSLKVQTGSR*SPVVGPPGGRAGRG Trigger: GCCTCTTCCGGCGCGTCCTCCTGGCGGTCCTACTACTGGTGATCATCTGGACCCTGTTTGGACCTTCAGGCTTGGGGGAGGAGCTGCTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| CDS GCA 90 bp | ACATGGTGCCGGGACTCTGGTGTCCGAGTGGGTCTCACCCTCCAGTaGACCCTGCCTAAATACAGAAGGGGCACTGCCTGGCCTCTGTGC | + |
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Preference number: 5 (lower is better) Translates to: TWCRDSGVRVGLTLQ*TLPKYRRGTAWPLC Trigger: GCACAGAGGCCAGGCAGTGCCCCTTCTGTATTTAGGCAGGGTGCACTGGAGGGTGAGACCCACTCGGACACCAGAGTCCCGGCACCATGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| CDS-3UTR CAA 90 bp | CCGCCCTTGGCTTTATCCCTCCCCGGAGCTGGCAGGCCAGGGCCCAAGTTTATCGTAGCACCAGCCAATTaGACACAGTGTGTGGGGGCA | + |
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Preference number: 5 (lower is better) Translates to: PPLALSLPGAGRPGPKFIVAPAN*TQCVGA Trigger: TGCCCCCACACACTGTGTCAAATTGGCTGGTGCTAC...GATAAACTTGGGCCCTGGCCTGCCAGCTCCGGGGAGGGATAAAGCCAAGGGCGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| CDS CCA 90 bp | GCCACAGTTCTTCTGACACATGGTGCCGGGACTCTGGTGTCCGAGTaGGTCTCACCCTCCAGTGCACCCTGCCTAAATACAGAAGGGGCA | + |
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Preference number: 5 (lower is better) Translates to: ATVLLTHGAGTLVSE*VSPSSAPCLNTEGA Trigger: TGCCCCTTCTGTATTTAGGCAGGGTGCACTGGAGGGTGAGACCCACTCGGACACCAGAGTCCCGGCACCATGTGTCAGAAGAACTGTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| CDS GCA 90 bp | GCACCTCAAGGTACCCAGAAATCCCTGGAGCCAGGAGCAAAAGGGTaGAGTCCTCTCCCCATTCATGCCGCTCACCAGCTTCCAAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: APQGTQKSLEPGAKG*SPLPIHAAHQLPSF Trigger: GAAGCTTGGAAGCTGGTGAGCGGCATGAATGGGGAGAGGACTGCACCCTTTTGCTCCTGGCTCCAGGGATTTCTGGGTACCTTGAGGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| CDS CCA 90 bp | CTCACCCTCCAGTGCACCCTGCCTAAATACAGAAGGGGCACTGCCTaGCCTCTGTGCTCTTCATGGATAGCTGTTGTCTCTTCCTGGGCC | + |
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Preference number: 5 (lower is better) Translates to: LTLQCTLPKYRRGTA*PLCSSWIAVVSSWA Trigger: GGCCCAGGAAGAGACAACAGCTATCCATGAAGAGCACAGAGGCCAGGCAGTGCCCCTTCTGTATTTAGGCAGGGTGCACTGGAGGGTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| CDS CCA 90 bp | CTGAACCAGGCTATGAACCGGCACCTCAAGGTACCCAGAAATCCCTaGAGCCAGGAGCAAAAGGGTGCAGTCCTCTCCCCATTCATGCCG | + |
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Preference number: 5 (lower is better) Translates to: LNQAMNRHLKVPRNP*SQEQKGAVLSPFMP Trigger: CGGCATGAATGGGGAGAGGACTGCACCCTTTTGCTCCTGGCTCCAGGGATTTCTGGGTACCTTGAGGTGCCGGTTCATAGCCTGGTTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| CDS GCA 90 bp | GCAGTCCTCTCCCCATTCATGCCGCTCACCAGCTTCCAAGCTTCCTaGATTTGCCAGGGATCCACCTTGTGGGATGTCAGCAGGAACTTC | + |
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Preference number: 5 (lower is better) Translates to: AVLSPFMPLTSFQAS*ICQGSTLWDVSRNF Trigger: GAAGTTCCTGCTGACATCCCACAAGGTGGATCCCTGGCAAATGCAGGAAGCTTGGAAGCTGGTGAGCGGCATGAATGGGGAGAGGACTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| CDS-3UTR CAA 90 bp | GGAGCTGGCAGGCCAGGGCCCAAGTTTATCTTGGTAAACTTGGTTGGTTGCAGCTGCCAGGGATCCACCTaGTGGGATGTCAGCAGGAAC | + |
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Preference number: 5 (lower is better) Translates to: GAGRPGPKFILVNLVGCSCQGST*WDVSRN Trigger: GTTCCTGCTGACATCCCACAAGGTGGATCCCTGGCA...GCTGCAACCAACCAAGTTTACCAAGATAAACTTGGGCCCTGGCCTGCCAGCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| CDS CCA 90 bp | CTGCCTAAATACAGAAGGGGCACTGCCTGGCCTCTGTGCTCTTCATaGATAGCTGTTGTCTCTTCCTGGGCCTCTTTGCCCTTCTGCCAT | + |
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Preference number: 5 (lower is better) Translates to: LPKYRRGTAWPLCSS*IAVVSSWASLPFCH Trigger: ATGGCAGAAGGGCAAAGAGGCCCAGGAAGAGACAACAGCTATCCATGAAGAGCACAGAGGCCAGGCAGTGCCCCTTCTGTATTTAGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| CDS-3UTR CAA 90 bp | GGGCCCAAGTTTATCTTGGTAAACTTGGTTGGTTGCAGCTTCAGAGTTTGCTGTCCAAGCTTCCTGCATTaGCCAGGGATCCACCTTGTG | + |
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Preference number: 5 (lower is better) Translates to: GPKFILVNLVGCSFRVCCPSFLH*PGIHLV Trigger: CACAAGGTGGATCCCTGGCAAATGCAGGAAGCTTGG...ACAGCAAACTCTGAAGCTGCAACCAACCAAGTTTACCAAGATAAACTTGGGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| CDS CCA 72 bp | CCCGGGCTTCGCGGATGGCACCCCAAGATGCCCGAATaGCGTTTCTCTGGTTCAGGTGCTCCGGGGCCGTAC | + |
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Preference number: 6 (lower is better) Translates to: PGLRGWHPKMPE*RFSGSGAPGPY Trigger: GTACGGCCCCGGAGCACCTGAACCAGAGAAACGCCATTCGGGCATCTTGGGGTGCCATCCGCGAAGCCCGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| CDS GCA 72 bp | TCTGAAACCCCGGGCTTCGCGGATGGCACCCCAAGATaGCCGAATGGCGTTTCTCTGGTTCAGGTGCTCCGG | + |
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Preference number: 6 (lower is better) Translates to: SETPGFADGTPR*PNGVSLVQVLR Trigger: CCGGAGCACCTGAACCAGAGAAACGCCATTCGGGCATCTTGGGGTGCCATCCGCGAAGCCCGGGGTTTCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| CDS GCA 72 bp | CGGGACTCTGGTGTCCGAGTGGGTCTCACCCTCCAGTaGACCCTGCCTAAATACAGAAGGGGCACTGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: RDSGVRVGLTLQ*TLPKYRRGTAW Trigger: CCAGGCAGTGCCCCTTCTGTATTTAGGCAGGGTGCACTGGAGGGTGAGACCCACTCGGACACCAGAGTCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| CDS CCA 72 bp | CGGATGGCACCCCAAGATGCCCGAATGGCGTTTCTCTaGTTCAGGTGCTCCGGGGCCGTACACACCAGGATG | + |
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Preference number: 6 (lower is better) Translates to: RMAPQDARMAFL*FRCSGAVHTRM Trigger: CATCCTGGTGTGTACGGCCCCGGAGCACCTGAACCAGAGAAACGCCATTCGGGCATCTTGGGGTGCCATCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| CDS GCA 72 bp | CCCCAAGATGCCCGAATGGCGTTTCTCTGGTTCAGGTaGTCCGGGGCCGTACACACCAGGATGAGCAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: PQDARMAFLWFR*SGAVHTRMSRK Trigger: CTTCCTGCTCATCCTGGTGTGTACGGCCCCGGAGCACCTGAACCAGAGAAACGCCATTCGGGCATCTTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| CDS GCA 72 bp | CCCCAGTTTTCCGGCCACAGTTCTTCTGACACATGGTaGCGGGACTCTGGTGTCCGAGTGGGTCTCACCCTC | + |
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Preference number: 6 (lower is better) Translates to: PQFSGHSSSDTW*RDSGVRVGLTL Trigger: GAGGGTGAGACCCACTCGGACACCAGAGTCCCGGCACCATGTGTCAGAAGAACTGTGGCCGGAAAACTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| CDS GCA 72 bp | TGCTGTCTTCTAGGTTTTCCCAGGAGGAAGAGCGTCTaGACTCTGAAACCCCGGGCTTCGCGGATGGCACCC | + |
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Preference number: 6 (lower is better) Translates to: CCLLGFPRRKSV*TLKPRASRMAP Trigger: GGGTGCCATCCGCGAAGCCCGGGGTTTCAGAGTGCAGACGCTCTTCCTCCTGGGAAAACCTAGAAGACAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| CDS GCA 72 bp | GCCAGGAGCAAAAGGGTGCAGTCCTCTCCCCATTCATaGCGCTCACCAGCTTCCAAGCTTCCTGCATTTGCC | + |
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Preference number: 6 (lower is better) Translates to: ARSKRVQSSPHS*RSPASKLPAFA Trigger: GGCAAATGCAGGAAGCTTGGAAGCTGGTGAGCGGCATGAATGGGGAGAGGACTGCACCCTTTTGCTCCTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| CDS CCA 72 bp | CTTCTGACACATGGTGCCGGGACTCTGGTGTCCGAGTaGGTCTCACCCTCCAGTGCACCCTGCCTAAATACA | + |
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Preference number: 6 (lower is better) Translates to: LLTHGAGTLVSE*VSPSSAPCLNT Trigger: TGTATTTAGGCAGGGTGCACTGGAGGGTGAGACCCACTCGGACACCAGAGTCCCGGCACCATGTGTCAGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| CDS CAA 90 bp | CCTCTCCCCATTCATGCCGCTCACCAGCTTCCAAGCTTCCTGCATTaGCCAGGGATCCACCTTGTGGGATGTCAGCAGGAACTTCCCGTA | + |
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Preference number: 6 (lower is better) Translates to: PLPIHAAHQLPSFLH*PGIHLVGCQQELPV Trigger: TACGGGAAGTTCCTGCTGACATCCCACAAGGTGGATCCCTGGCAAATGCAGGAAGCTTGGAAGCTGGTGAGCGGCATGAATGGGGAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| CDS GCA 72 bp | TCCCCATTCATGCCGCTCACCAGCTTCCAAGCTTCCTaGATTTGCCAGGGATCCACCTTGTGGGATGTCAGC | + |
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Preference number: 6 (lower is better) Translates to: SPFMPLTSFQAS*ICQGSTLWDVS Trigger: GCTGACATCCCACAAGGTGGATCCCTGGCAAATGCAGGAAGCTTGGAAGCTGGTGAGCGGCATGAATGGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| CDS CCA 72 bp | TACAGAAGGGGCACTGCCTGGCCTCTGTGCTCTTCATaGATAGCTGTTGTCTCTTCCTGGGCCTCTTTGCCC | + |
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Preference number: 6 (lower is better) Translates to: YRRGTAWPLCSS*IAVVSSWASLP Trigger: GGGCAAAGAGGCCCAGGAAGAGACAACAGCTATCCATGAAGAGCACAGAGGCCAGGCAGTGCCCCTTCTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| CDS GCA 72 bp | CTGTGTGCTGCTGACTCTGAGGACAGGTCAGCAAGCTaGTGTCTTCTAGGTTTTCCCAGGAGGAAGAGCGTC | + |
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Preference number: 6 (lower is better) Translates to: LCAADSEDRSAS*CLLGFPRRKSV Trigger: GACGCTCTTCCTCCTGGGAAAACCTAGAAGACAGCAGCTTGCTGACCTGTCCTCAGAGTCAGCAGCACACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| CDS GCA 72 bp | TTCATGCCGCTCACCAGCTTCCAAGCTTCCTGCATTTaGCAGGGATCCACCTTGTGGGATGTCAGCAGGAAC | + |
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Preference number: 6 (lower is better) Translates to: FMPLTSFQASCI*QGSTLWDVSRN Trigger: GTTCCTGCTGACATCCCACAAGGTGGATCCCTGGCAAATGCAGGAAGCTTGGAAGCTGGTGAGCGGCATGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| CDS CCA 72 bp | CAGTGCACCCTGCCTAAATACAGAAGGGGCACTGCCTaGCCTCTGTGCTCTTCATGGATAGCTGTTGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: QCTLPKYRRGTA*PLCSSWIAVVS Trigger: AGAGACAACAGCTATCCATGAAGAGCACAGAGGCCAGGCAGTGCCCCTTCTGTATTTAGGCAGGGTGCACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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| CDS CAA 72 bp | ATTCATGCCGCTCACCAGCTTCCAAGCTTCCTGCATTaGCCAGGGATCCACCTTGTGGGATGTCAGCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: IHAAHQLPSFLH*PGIHLVGCQQE Trigger: TTCCTGCTGACATCCCACAAGGTGGATCCCTGGCAAATGCAGGAAGCTTGGAAGCTGGTGAGCGGCATGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087543.5 |
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