Pregenerated sensors for B3GALT2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033849Ensembl transcript IDs: ENSMUST00000038252.4
Found 138 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CACACCTCTGTAACTCCAGTTCCAGCAGATCCATGGCACCAGGCATaGATATGGTACACATATATGTGCACGCAGGCAAAATACTTACAC | + |
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Preference number: 1 (lower is better) Translates to: HTSVTPVPADPWHQA*IWYTYMCTQAKYLH Trigger: GTGTAAGTATTTTGCCTGCGTGCACATATATGTGTACCATATGCATGCCTGGTGCCATGGATCTGCTGGAACTGGAGTTACAGAGGTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| 3UTR TCA 90 bp | TTTCCCTTTTCTTATGTATCCCTAACACCTGATGTCATGTGCCAGTaGGTGAACAGTGTCTGTGAGATCTGTGGGCTTGGCCAAAGAGAA | + |
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Preference number: 1 (lower is better) Translates to: FPFSYVSLTPDVMCQ*VNSVCEICGLGQRE Trigger: TTCTCTTTGGCCAAGCCCACAGATCTCACAGACACTGTTCACTCACTGGCACATGACATCAGGTGTTAGGGATACATAAGAAAAGGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| 3UTR CCA 90 bp | GTAGTCCCTGAACTAGGGACAAGTCTGATGGCCCGAGTTCTATTTTaGAAATCACATAGTTGTAGGAAAAACCCAACTCCTACAAGCTCT | + |
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Preference number: 1 (lower is better) Translates to: VVPELGTSLMARVLF*KSHSCRKNPTPTSS Trigger: AGAGCTTGTAGGAGTTGGGTTTTTCCTACAACTATGTGATTTCCAAAATAGAACTCGGGCCATCAGACTTGTCCCTAGTTCAGGGACTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| 3UTR GCA 90 bp | CTAACACAGAACAGTAGCCGAGAACTGGTCCAGTGGGTACATCTATaGACTGCTGTATTTGTTGGCTACAATTACAGTTGTGAAATTTCT | + |
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Preference number: 1 (lower is better) Translates to: LTQNSSRELVQWVHL*TAVFVGYNYSCEIS Trigger: AGAAATTTCACAACTGTAATTGTAGCCAACAAATACAGCAGTGCATAGATGTACCCACTGGACCAGTTCTCGGCTACTGTTCTGTGTTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| 3UTR GCA 90 bp | TATTTGTTGGCTACAATTACAGTTGTGAAATTTCTAAGTGTCACTTaGCTACTGTTAGCAGATGTAACCCAGGGCCTAAAACAGCAGTGC | + |
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Preference number: 1 (lower is better) Translates to: YLLATITVVKFLSVT*LLLADVTQGLKQQC Trigger: GCACTGCTGTTTTAGGCCCTGGGTTACATCTGCTAACAGTAGGCAAGTGACACTTAGAAATTTCACAACTGTAATTGTAGCCAACAAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| 3UTR CCA 90 bp | GCTGGGGTTTCTCTTCCAAACCCTTGCTCACACTACTGTTTTTATTaGCCTCTTGTTTACATTGTATTAGTTCTTATCCACGGAAATATG | + |
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Preference number: 1 (lower is better) Translates to: AGVSLPNPCSHYCFY*PLVYIVLVLIHGNM Trigger: CATATTTCCGTGGATAAGAACTAATACAATGTAAACAAGAGGCCAATAAAAACAGTAGTGTGAGCAAGGGTTTGGAAGAGAAACCCCAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| 3UTR CCA 90 bp | TGGTCAGAGGTCAATTTGTGTGAGTCAATTCTCTTTTCCACTATTTaGGTACCTAGGAAAAGGCATGGTAGTATACTTGGTTTGTTTGTT | + |
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Preference number: 1 (lower is better) Translates to: WSEVNLCESILFSTI*VPRKRHGSILGLFV Trigger: AACAAACAAACCAAGTATACTACCATGCCTTTTCCTAGGTACCCAAATAGTGGAAAAGAGAATTGACTCACACAAATTGACCTCTGACCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| 3UTR TCA 90 bp | GCCAATTGTGCTTGGTTTTGTAGAACTATTAGCTTCTGCCATAAATaGAATACACAGCAGAAGATCATAATAGTGGATAAGAGCATGACC | + |
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Preference number: 1 (lower is better) Translates to: ANCAWFCRTISFCHK*NTQQKIIIVDKSMT Trigger: GGTCATGCTCTTATCCACTATTATGATCTTCTGCTGTGTATTTCATTTATGGCAGAAGCTAATAGTTCTACAAAACCAAGCACAATTGGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| 3UTR CCA 90 bp | CTTTATTTAAATACACAGGTGTATCAGAACTCTGAGACTAAAACTTaGGCTGGGCTTCTTTCTTGGTTAGTATTCCCAGTACTCATTAAG | + |
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Preference number: 1 (lower is better) Translates to: LYLNTQVYQNSETKT*AGLLSWLVFPVLIK Trigger: CTTAATGAGTACTGGGAATACTAACCAAGAAAGAAGCCCAGCCCAAGTTTTAGTCTCAGAGTTCTGATACACCTGTGTATTTAAATAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| 3UTR-3UTR CCA 90 bp | TGGGCCAGAATGTCTTCTAGGAGCCAGATTGGTCCCATTGGGAATGACAGTGACGTTCCAGCAGATCCATaGCACCAGGCATGCATATGG | + |
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Preference number: 2 (lower is better) Translates to: WARMSSRSQIGPIGNDSDVPADP*HQACIW Trigger: CCATATGCATGCCTGGTGCCATGGATCTGCTGGAAC...GTCACTGTCATTCCCAATGGGACCAATCTGGCTCCTAGAAGACATTCTGGCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| 3UTR CAA 90 bp | GTGTGTGTGTGTGCACGCGCGCGTGTGCGTGTGTGTACAGGTGTCTaGGTGCACACTTATAATGGTCAGAGGTCAATTTGTGTGAGTCAA | + |
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Preference number: 2 (lower is better) Translates to: VCVCARARVRVCTGV*VHTYNGQRSICVSQ Trigger: TTGACTCACACAAATTGACCTCTGACCATTATAAGTGTGCACCAAGACACCTGTACACACACGCACACGCGCGCGTGCACACACACACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| 3UTR-3UTR TCA 90 bp | TGGGCCAGAATGTCTTCTAGGAGCCAGATTGGTCCCATTGGGAATGACAGTGACTCATGTGCCAGTGAGTaGACAGTGTCTGTGAGATCT | + |
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Preference number: 2 (lower is better) Translates to: WARMSSRSQIGPIGNDSDSCASE*TVSVRS Trigger: AGATCTCACAGACACTGTTCACTCACTGGCACATGA...GTCACTGTCATTCCCAATGGGACCAATCTGGCTCCTAGAAGACATTCTGGCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| 3UTR-3UTR TCA 90 bp | TGGGCCAGAATGTCTTCTAGGAGCCAGATTGGTCCCATTGGGAATGACAGTGACTGTATCCCTAACACCTaGTGTCATGTGCCAGTGAGT | + |
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Preference number: 2 (lower is better) Translates to: WARMSSRSQIGPIGNDSDCIPNT*CHVPVS Trigger: ACTCACTGGCACATGACATCAGGTGTTAGGGATACA...GTCACTGTCATTCCCAATGGGACCAATCTGGCTCCTAGAAGACATTCTGGCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| 3UTR-3UTR CCA 90 bp | TGGGCCAGAATGTCTTCTAGGAGCCAGATTGGTCCCATTGGGAATGACAGTGACCTCCTCTACTTGCTGTaGCATGTGCTTAAACACATG | + |
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Preference number: 2 (lower is better) Translates to: WARMSSRSQIGPIGNDSDLLYLL*HVLKHM Trigger: CATGTGTTTAAGCACATGCCACAGCAAGTAGAGGAG...GTCACTGTCATTCCCAATGGGACCAATCTGGCTCCTAGAAGACATTCTGGCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| 3UTR-3UTR TCA 90 bp | GTGTGTACAGGTGTCTTGGTGCACACTTATAATGGTCAGAGGTCAATTTGTGTGGTCTCTCTCTGTCTTTaGTCACTGGTGTGGTTTGGT | + |
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Preference number: 2 (lower is better) Translates to: VCTGVLVHTYNGQRSICVVSLCL*SLVWFG Trigger: ACCAAACCACACCAGTGATCAAAGACAGAGAGAGAC...CACACAAATTGACCTCTGACCATTATAAGTGTGCACCAAGACACCTGTACACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| 3UTR-3UTR TCA 90 bp | TTTGCAGAAGAGAAGAGCAAACAACCAAGGGACCAAATGTCTTTTCCTTTCCCTGATGTCATGTGCCAGTaGGTGAACAGTGTCTGTGAG | + |
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Preference number: 2 (lower is better) Translates to: FAEEKSKQPRDQMSFPFPDVMCQ*VNSVCE Trigger: CTCACAGACACTGTTCACTCACTGGCACATGACATC...AGGGAAAGGAAAAGACATTTGGTCCCTTGGTTGTTTGCTCTTCTCTTCTGCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| 3UTR-3UTR GCA 90 bp | TGGGCCAGAATGTCTTCTAGGAGCCAGATTGGTCCCATTGGGAATGACAGTGACGTACCTTGGTTAAAGTaGATTAAGTATATTGTCCAC | + |
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Preference number: 2 (lower is better) Translates to: WARMSSRSQIGPIGNDSDVPWLK*IKYIVH Trigger: GTGGACAATATACTTAATGCACTTTAACCAAGGTAC...GTCACTGTCATTCCCAATGGGACCAATCTGGCTCCTAGAAGACATTCTGGCCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| 3UTR-3UTR GCA 90 bp | GTGTGTACAGGTGTCTTGGTGCACACTTATAATGGTCAGAGGTCAATTTGTGTGCAGTGGGTACATCTATaGACTGCTGTATTTGTTGGC | + |
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Preference number: 2 (lower is better) Translates to: VCTGVLVHTYNGQRSICVQWVHL*TAVFVG Trigger: GCCAACAAATACAGCAGTGCATAGATGTACCCACTG...CACACAAATTGACCTCTGACCATTATAAGTGTGCACCAAGACACCTGTACACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| 3UTR CAA 90 bp | GCCGAGAACTGGTCCAGTGGGTACATCTATGCACTGCTGTATTTGTaGGCTACAATTACAGTTGTGAAATTTCTAAGTGTCACTTGCCTA | + |
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Preference number: 2 (lower is better) Translates to: AENWSSGYIYALLYL*ATITVVKFLSVTCL Trigger: TAGGCAAGTGACACTTAGAAATTTCACAACTGTAATTGTAGCCAACAAATACAGCAGTGCATAGATGTACCCACTGGACCAGTTCTCGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| 3UTR CAA 90 bp | GTAGCCGAGAACTGGTCCAGTGGGTACATCTATGCACTGCTGTATTaGTTGGCTACAATTACAGTTGTGAAATTTCTAAGTGTCACTTGC | + |
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Preference number: 2 (lower is better) Translates to: VAENWSSGYIYALLY*LATITVVKFLSVTC Trigger: GCAAGTGACACTTAGAAATTTCACAACTGTAATTGTAGCCAACAAATACAGCAGTGCATAGATGTACCCACTGGACCAGTTCTCGGCTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| 3UTR-3UTR TCA 90 bp | GTGTGTACAGGTGTCTTGGTGCACACTTATAATGGTCAGAGGTCAATTTGTGTGTTATTTTCCAAGTGCTaGAGCTATGCTAGCGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: VCTGVLVHTYNGQRSICVLFSKC*SYASVC Trigger: ACACACGCTAGCATAGCTTCAGCACTTGGAAAATAA...CACACAAATTGACCTCTGACCATTATAAGTGTGCACCAAGACACCTGTACACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| 3UTR CAA 90 bp | ATAAATCAGAGAGACTCAGTACACTGTCAGGGTCTCTCTCTGTCTTaGATCACTGGTGTGGTTTGGTGTTATCCTCTGTGTATGTCTTTT | + |
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Preference number: 2 (lower is better) Translates to: INQRDSVHCQGLSLS*ITGVVWCYPLCMSF Trigger: AAAAGACATACACAGAGGATAACACCAAACCACACCAGTGATCAAAGACAGAGAGAGACCCTGACAGTGTACTGAGTCTCTCTGATTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| 3UTR CAA 90 bp | GTATTTGTTGGCTACAATTACAGTTGTGAAATTTCTAAGTGTCACTaGCCTACTGTTAGCAGATGTAACCCAGGGCCTAAAACAGCAGTG | + |
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Preference number: 2 (lower is better) Translates to: VFVGYNYSCEISKCH*PTVSRCNPGPKTAV Trigger: CACTGCTGTTTTAGGCCCTGGGTTACATCTGCTAACAGTAGGCAAGTGACACTTAGAAATTTCACAACTGTAATTGTAGCCAACAAATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| 3UTR CAA 90 bp | TCACGAGCCCCTATGCGGTCTTCAGACTGTTCTTTAACAGATACATaGTTCTTGGATTCTTTCTTTTCTCCAACTTGTTCATGTGCTAGA | + |
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Preference number: 2 (lower is better) Translates to: SRAPMRSSDCSLTDT*FLDSFFSPTCSCAR Trigger: TCTAGCACATGAACAAGTTGGAGAAAAGAAAGAATCCAAGAACAATGTATCTGTTAAAGAACAGTCTGAAGACCGCATAGGGGCTCGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| 3UTR-3UTR TCA 90 bp | GTGTGTACAGGTGTCTTGGTGCACACTTATAATGGTCAGAGGTCAATTTGTGTGAAAGGCAAAATCCATTaGAATATGGTCTTGACCCTT | + |
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Preference number: 2 (lower is better) Translates to: VCTGVLVHTYNGQRSICVKGKIH*NMVLTL Trigger: AAGGGTCAAGACCATATTTCAATGGATTTTGCCTTT...CACACAAATTGACCTCTGACCATTATAAGTGTGCACCAAGACACCTGTACACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| 3UTR-3UTR TCA 90 bp | TTTGCAGAAGAGAAGAGCAAACAACCAAGGGACCAAATGTCTTTTCCTTTCCCTAGCTTCTGCCATAAATaGAATACACAGCAGAAGATC | + |
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Preference number: 2 (lower is better) Translates to: FAEEKSKQPRDQMSFPFPSFCHK*NTQQKI Trigger: GATCTTCTGCTGTGTATTTCATTTATGGCAGAAGCT...AGGGAAAGGAAAAGACATTTGGTCCCTTGGTTGTTTGCTCTTCTCTTCTGCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| 3UTR-3UTR TCA 90 bp | TGTTCTTTCTTTCATCGCAGACTTGTTTTTAGTGATGTGTGTACTAGATGGGTCTCTGCTACACAGCTGTaGCTATCCTTGAACATCCTA | + |
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Preference number: 2 (lower is better) Translates to: CSFFHRRLVFSDVCTRWVSATQL*LSLNIL Trigger: TAGGATGTTCAAGGATAGTCACAGCTGTGTAGCAGA...GACCCATCTAGTACACACATCACTAAAAACAAGTCTGCGATGAAAGAAAGAACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| 3UTR-3UTR GCA 90 bp | TGTTCTTTCTTTCATCGCAGACTTGTTTTTAGTGATGTGTGTACTAGATGGGTCGTTTGTACGGCTAGATaGAAGTGTGTGTGTGCTCTT | + |
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Preference number: 2 (lower is better) Translates to: CSFFHRRLVFSDVCTRWVVCTAR*KCVCAL Trigger: AAGAGCACACACACACTTGCATCTAGCCGTACAAAC...GACCCATCTAGTACACACATCACTAAAAACAAGTCTGCGATGAAAGAAAGAACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| 3UTR CAA 90 bp | GGAACGCTCACAAACATACATAGTTCCCATTTTCATTTTAAACCTTaGTGGTATAAATCAGAGAGACTCAGTACACTGTCAGGGTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: GTLTNIHSSHFHFKP*WYKSERLSTLSGSL Trigger: GAGAGACCCTGACAGTGTACTGAGTCTCTCTGATTTATACCACAAAGGTTTAAAATGAAAATGGGAACTATGTATGTTTGTGAGCGTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| 3UTR-3UTR GCA 90 bp | GTGTGTACAGGTGTCTTGGTGCACACTTATAATGGTCAGAGGTCAATTTGTGTGCCATTTACCAATATTTaGAGAAGAGAAGAGCAAACA | + |
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Preference number: 2 (lower is better) Translates to: VCTGVLVHTYNGQRSICVPFTNI*RREEQT Trigger: TGTTTGCTCTTCTCTTCTGCAAATATTGGTAAATGG...CACACAAATTGACCTCTGACCATTATAAGTGTGCACCAAGACACCTGTACACAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| 3UTR-3UTR GCA 90 bp | TGTTCTTTCTTTCATCGCAGACTTGTTTTTAGTGATGTGTGTACTAGATGGGTCGTACAGGTGTCTTGGTaGACACTTATAATGGTCAGA | + |
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Preference number: 2 (lower is better) Translates to: CSFFHRRLVFSDVCTRWVVQVSW*TLIMVR Trigger: TCTGACCATTATAAGTGTGCACCAAGACACCTGTAC...GACCCATCTAGTACACACATCACTAAAAACAAGTCTGCGATGAAAGAAAGAACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| 3UTR-3UTR CCA 90 bp | TGTTCTTTCTTTCATCGCAGACTTGTTTTTAGTGATGTGTGTACTAGATGGGTCTCTGTCTTTGATCACTaGTGTGGTTTGGTGTTATCC | + |
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Preference number: 2 (lower is better) Translates to: CSFFHRRLVFSDVCTRWVSVFDH*CGLVLS Trigger: GGATAACACCAAACCACACCAGTGATCAAAGACAGA...GACCCATCTAGTACACACATCACTAAAAACAAGTCTGCGATGAAAGAAAGAACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| 3UTR CAA 90 bp | AGCTGGGGTTTCTCTTCCAAACCCTTGCTCACACTACTGTTTTTATaGGCCTCTTGTTTACATTGTATTAGTTCTTATCCACGGAAATAT | + |
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Preference number: 2 (lower is better) Translates to: SWGFSSKPLLTLLFL*ASCLHCISSYPRKY Trigger: ATATTTCCGTGGATAAGAACTAATACAATGTAAACAAGAGGCCAATAAAAACAGTAGTGTGAGCAAGGGTTTGGAAGAGAAACCCCAGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| 3UTR-3UTR TCA 90 bp | TCTTTCATCGCAGACTTGTTTTTAGTGATGTGTGTACTAGATGGGTCAGATGAAGTGTATGTCTTTTTGTaGGGCAATTCTGTTCACTAC | + |
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Preference number: 2 (lower is better) Translates to: SFIADLFLVMCVLDGSDEVYVFL*GNSVHY Trigger: GTAGTGAACAGAATTGCCTCACAAAAAGACATACAC...TTCATCTGACCCATCTAGTACACACATCACTAAAAACAAGTCTGCGATGAAAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| 3UTR-3UTR GCA 90 bp | TGGTATAAATCAGAGAGACTCAGTACACTGTCAGGGTCTCTCTCTGTCTTTGATTTCTTGAATGAGAATTaGATTGCTCAAACACCTGAA | + |
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Preference number: 2 (lower is better) Translates to: WYKSERLSTLSGSLSVFDFLNEN*IAQTPE Trigger: TTCAGGTGTTTGAGCAATGCAATTCTCATTCAAGAA...ATCAAAGACAGAGAGAGACCCTGACAGTGTACTGAGTCTCTCTGATTTATACCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| 3UTR-3UTR GCA 90 bp | TGTTCTTTCTTTCATCGCAGACTTGTTTTTAGTGATGTGTGTACTAGATGGGTCATGCAAGTGTGTGTGTaGTCTTTAGTTTTCCTTTCC | + |
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Preference number: 2 (lower is better) Translates to: CSFFHRRLVFSDVCTRWVMQVCV*SLVFLS Trigger: GGAAAGGAAAACTAAAGAGCACACACACACTTGCAT...GACCCATCTAGTACACACATCACTAAAAACAAGTCTGCGATGAAAGAAAGAACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| 3UTR-3UTR GCA 90 bp | TCTTTCATCGCAGACTTGTTTTTAGTGATGTGTGTACTAGATGGGTCAGATGAATTTCTAAGTGTCACTTaGCTACTGTTAGCAGATGTA | + |
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Preference number: 2 (lower is better) Translates to: SFIADLFLVMCVLDGSDEFLSVT*LLLADV Trigger: TACATCTGCTAACAGTAGGCAAGTGACACTTAGAAA...TTCATCTGACCCATCTAGTACACACATCACTAAAAACAAGTCTGCGATGAAAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| 3UTR-3UTR CCA 90 bp | TGTTCTTTCTTTCATCGCAGACTTGTTTTTAGTGATGTGTGTACTAGATGGGTCTTTCTACTCCAGATCTaGAAGACTTTTCCTTTTTCG | + |
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Preference number: 2 (lower is better) Translates to: CSFFHRRLVFSDVCTRWVFLLQI*KTFPFS Trigger: CGAAAAAGGAAAAGTCTTCCAGATCTGGAGTAGAAA...GACCCATCTAGTACACACATCACTAAAAACAAGTCTGCGATGAAAGAAAGAACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| 3UTR CCA 72 bp | CTGAGAGCAGGATCTGTGATGGAAGACTGTGTACCCTaGGCCAGAATGTCTTCTAGGAGCCAGATTGGTCCC | + |
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Preference number: 3 (lower is better) Translates to: LRAGSVMEDCVP*ARMSSRSQIGP Trigger: GGGACCAATCTGGCTCCTAGAAGACATTCTGGCCCAGGGTACACAGTCTTCCATCACAGATCCTGCTCTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| 3UTR CCA 72 bp | GCTCACACCTCTGTAACTCCAGTTCCAGCAGATCCATaGCACCAGGCATGCATATGGTACACATATATGTGC | + |
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Preference number: 3 (lower is better) Translates to: AHTSVTPVPADP*HQACIWYTYMC Trigger: GCACATATATGTGTACCATATGCATGCCTGGTGCCATGGATCTGCTGGAACTGGAGTTACAGAGGTGTGAGC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| 3UTR TCA 72 bp | TCTAGACACTTTAACCTGAGCATTGGAAGTAGTCCCTaGACTAGGGACAAGTCTGATGGCCCGAGTTCTATT | + |
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Preference number: 3 (lower is better) Translates to: SRHFNLSIGSSP*TRDKSDGPSSI Trigger: AATAGAACTCGGGCCATCAGACTTGTCCCTAGTTCAGGGACTACTTCCAATGCTCAGGTTAAAGTGTCTAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| 3UTR CCA 72 bp | CAGGGTCTCTCTCTGTCTTTGATCACTGGTGTGGTTTaGTGTTATCCTCTGTGTATGTCTTTTTGTGAGGCA | + |
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Preference number: 3 (lower is better) Translates to: QGLSLSLITGVV*CYPLCMSFCEA Trigger: TGCCTCACAAAAAGACATACACAGAGGATAACACCAAACCACACCAGTGATCAAAGACAGAGAGAGACCCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| 3UTR TCA 72 bp | ACAAAGTTTTGTCTGCTACACAGCTGTGACTATCCTTaGACATCCTATGTAGACCAGCCTGTCCTCAAACAC | + |
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Preference number: 3 (lower is better) Translates to: TKFCLLHSCDYP*TSYVDQPVLKH Trigger: GTGTTTGAGGACAGGCTGGTCTACATAGGATGTTCAAGGATAGTCACAGCTGTGTAGCAGACAAAACTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| 3UTR GCA 72 bp | AACAGTAGCCGAGAACTGGTCCAGTGGGTACATCTATaGACTGCTGTATTTGTTGGCTACAATTACAGTTGT | + |
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Preference number: 3 (lower is better) Translates to: NSSRELVQWVHL*TAVFVGYNYSC Trigger: ACAACTGTAATTGTAGCCAACAAATACAGCAGTGCATAGATGTACCCACTGGACCAGTTCTCGGCTACTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| 3UTR CCA 72 bp | AGAGAACTAAGTGTAGCTTGTTGTTGCTACTTTAGCTaGGGTTTCTCTTCCAAACCCTTGCTCACACTACTG | + |
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Preference number: 3 (lower is better) Translates to: RELSVACCCYFS*GFSSKPLLTLL Trigger: CAGTAGTGTGAGCAAGGGTTTGGAAGAGAAACCCCAGCTAAAGTAGCAACAACAAGCTACACTTAGTTCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| 3UTR GCA 72 bp | GTTGCTACTTTAGCTGGGGTTTCTCTTCCAAACCCTTaGTCACACTACTGTTTTTATTGGCCTCTTGTTTAC | + |
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Preference number: 3 (lower is better) Translates to: VATLAGVSLPNP*SHYCFYWPLVY Trigger: GTAAACAAGAGGCCAATAAAAACAGTAGTGTGAGCAAGGGTTTGGAAGAGAAACCCCAGCTAAAGTAGCAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| 3UTR TCA 72 bp | TTGTTTTTAAGGCAGTGGTATCTAGACACTTTAACCTaGGCATTGGAAGTAGTCCCTGAACTAGGGACAAGT | + |
|
Preference number: 3 (lower is better) Translates to: LFLRQWYLDTLT*ALEVVPELGTS Trigger: ACTTGTCCCTAGTTCAGGGACTACTTCCAATGCTCAGGTTAAAGTGTCTAGATACCACTGCCTTAAAAACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
||
| 3UTR CCA 72 bp | AATACACAGGTGTATCAGAACTCTGAGACTAAAACTTaGGCTGGGCTTCTTTCTTGGTTAGTATTCCCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: NTQVYQNSETKT*AGLLSWLVFPV Trigger: TACTGGGAATACTAACCAAGAAAGAAGCCCAGCCCAAGTTTTAGTCTCAGAGTTCTGATACACCTGTGTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
||
| 3UTR-3UTR CAA 90 bp | GTCCAGTGGGTACATCTATGCACTGCTGTATTTGTTGGCTACAATTACAGTTGTTTAGGAGCTCTCTTTTaGTTTACATACTTGTGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: VQWVHLCTAVFVGYNYSCLGALF*FTYLCR Trigger: CCTGCACAAGTATGTAAACAAAAAGAGAGCTCCTAA...ACAACTGTAATTGTAGCCAACAAATACAGCAGTGCATAGATGTACCCACTGGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
||
| 3UTR-3UTR CAA 90 bp | TGGTATAAATCAGAGAGACTCAGTACACTGTCAGGGTCTCTCTCTGTCTTTGATTGCAGATACATTGTATaGGTCCCTAATGTAAGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: WYKSERLSTLSGSLSVFDCRYIV*VPNVSL Trigger: AAGACTTACATTAGGGACCAATACAATGTATCTGCA...ATCAAAGACAGAGAGAGACCCTGACAGTGTACTGAGTCTCTCTGATTTATACCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
||
| 3UTR-3UTR CAA 90 bp | TGGTATAAATCAGAGAGACTCAGTACACTGTCAGGGTCTCTCTCTGTCTTTGATGTCAGGTCAGAAAACTaGTTCATTGCACAATTACAA | + |
|
Preference number: 3 (lower is better) Translates to: WYKSERLSTLSGSLSVFDVRSEN*FIAQLQ Trigger: TTGTAATTGTGCAATGAACAAGTTTTCTGACCTGAC...ATCAAAGACAGAGAGAGACCCTGACAGTGTACTGAGTCTCTCTGATTTATACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
||
| 3UTR-3UTR CAA 90 bp | TCTTTCATCGCAGACTTGTTTTTAGTGATGTGTGTACTAGATGGGTCAGATGAATATTACTATGTTGCTTaGGCAGATCTGGAACTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: SFIADLFLVMCVLDGSDEYYYVA*ADLELQ Trigger: CTGCAGTTCCAGATCTGCCAAAGCAACATAGTAATA...TTCATCTGACCCATCTAGTACACACATCACTAAAAACAAGTCTGCGATGAAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
||
| 3UTR GCA 72 bp | GCTACAATTACAGTTGTGAAATTTCTAAGTGTCACTTaGCTACTGTTAGCAGATGTAACCCAGGGCCTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: ATITVVKFLSVT*LLLADVTQGLK Trigger: TTTTAGGCCCTGGGTTACATCTGCTAACAGTAGGCAAGTGACACTTAGAAATTTCACAACTGTAATTGTAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
||
| 3UTR-3UTR CAA 90 bp | TCTTTCATCGCAGACTTGTTTTTAGTGATGTGTGTACTAGATGGGTCAGATGAATTTTTGTTTACATACTaGTGCAGGAACGCTCACAAA | + |
|
Preference number: 3 (lower is better) Translates to: SFIADLFLVMCVLDGSDEFLFTY*CRNAHK Trigger: TTTGTGAGCGTTCCTGCACAAGTATGTAAACAAAAA...TTCATCTGACCCATCTAGTACACACATCACTAAAAACAAGTCTGCGATGAAAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
||
| 3UTR-3UTR CAA 90 bp | TGTTCTTTCTTTCATCGCAGACTTGTTTTTAGTGATGTGTGTACTAGATGGGTCACCATTTACCAATATTaGCAGAAGAGAAGAGCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: CSFFHRRLVFSDVCTRWVTIYQY*QKRRAN Trigger: GTTTGCTCTTCTCTTCTGCAAATATTGGTAAATGGT...GACCCATCTAGTACACACATCACTAAAAACAAGTCTGCGATGAAAGAAAGAACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
||
| 3UTR-3UTR CAA 90 bp | TGTTCTTTCTTTCATCGCAGACTTGTTTTTAGTGATGTGTGTACTAGATGGGTCTATGCACTGCTGTATTaGTTGGCTACAATTACAGTT | + |
|
Preference number: 3 (lower is better) Translates to: CSFFHRRLVFSDVCTRWVYALLY*LATITV Trigger: AACTGTAATTGTAGCCAACAAATACAGCAGTGCATA...GACCCATCTAGTACACACATCACTAAAAACAAGTCTGCGATGAAAGAAAGAACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
||
| 3UTR CCA 72 bp | AACTCTGAGACTAAAACTTGGGCTGGGCTTCTTTCTTaGTTAGTATTCCCAGTACTCATTAAGTTTATTAGA | + |
|
Preference number: 3 (lower is better) Translates to: NSETKTWAGLLS*LVFPVLIKFIR Trigger: TCTAATAAACTTAATGAGTACTGGGAATACTAACCAAGAAAGAAGCCCAGCCCAAGTTTTAGTCTCAGAGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
||
| 3UTR TCA 72 bp | TATGTAGCTTTCTCCCCACCATTCTCTAAATGGTTTTaGATTGGTGATGCGAATATTTGTCATCTACCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: YVAFSPPFSKWF*IGDANICHLPN Trigger: ATTTGGTAGATGACAAATATTCGCATCACCAATTCAAAACCATTTAGAGAATGGTGGGGAGAAAGCTACATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
||
| 3UTR CCA 72 bp | AACATACATAGTTCCCATTTTCATTTTAAACCTTTGTaGTATAAATCAGAGAGACTCAGTACACTGTCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: NIHSSHFHFKPL*YKSERLSTLSG Trigger: CCCTGACAGTGTACTGAGTCTCTCTGATTTATACCACAAAGGTTTAAAATGAAAATGGGAACTATGTATGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
||
| 3UTR TCA 72 bp | TTGATGTTACAATTCATGATAGGGCCAAATGAAATATaGGAACATTTGTATAGCATTCAGTTCAGGGCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: LMLQFMIGPNEI*EHLYSIQFRAL Trigger: CAAAGCCCTGAACTGAATGCTATACAAATGTTCTCATATTTCATTTGGCCCTATCATGAATTGTAACATCAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
||
| 3UTR TCA 72 bp | GCTTGGTTTTGTAGAACTATTAGCTTCTGCCATAAATaGAATACACAGCAGAAGATCATAATAGTGGATAAG | + |
|
Preference number: 3 (lower is better) Translates to: AWFCRTISFCHK*NTQQKIIIVDK Trigger: CTTATCCACTATTATGATCTTCTGCTGTGTATTTCATTTATGGCAGAAGCTAATAGTTCTACAAAACCAAGC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
||
| CDS-3UTR CCA 90 bp | TGGGCCAGAATGTCTTCTAGGAGCCAGATTGGTCCCATTGGGAATGACAGTGACAGGGTAGCGCTCACTTaGGTAAAGGTCTGGTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: WARMSSRSQIGPIGNDSDRVALT*VKVWWH Trigger: ATGCCACCAGACCTTTACCCAAGTGAGCGCTACCCT...GTCACTGTCATTCCCAATGGGACCAATCTGGCTCCTAGAAGACATTCTGGCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
||
| CDS-3UTR TCA 90 bp | TGGGCCAGAATGTCTTCTAGGAGCCAGATTGGTCCCATTGGGAATGACAGTGACAAACTCGCCAGTGATTaGACACGAACTCATTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: WARMSSRSQIGPIGNDSDKLASD*TRTHWE Trigger: CTCCCAATGAGTTCGTGTTCAATCACTGGCGAGTTT...GTCACTGTCATTCCCAATGGGACCAATCTGGCTCCTAGAAGACATTCTGGCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
||
| CDS-3UTR GCA 90 bp | TGGGCCAGAATGTCTTCTAGGAGCCAGATTGGTCCCATTGGGAATGACAGTGACGTGTCGATACCTGCCTaGCTTTTCCTTTGCTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: WARMSSRSQIGPIGNDSDVSIPA*LFLCCI Trigger: AATGCAGCAAAGGAAAAGGCAGGCAGGTATCGACAC...GTCACTGTCATTCCCAATGGGACCAATCTGGCTCCTAGAAGACATTCTGGCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
||
| CDS-3UTR TCA 90 bp | GTCCAGTGGGTACATCTATGCACTGCTGTATTTGTTGGCTACAATTACAGTTGTTGCTGCCATTGGCACTaGGAGTGTTCTGCAGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VQWVHLCTAVFVGYNYSCCCHWH*ECSAAL Trigger: CAGGGCTGCAGAACACTCTCAGTGCCAATGGCAGCA...ACAACTGTAATTGTAGCCAACAAATACAGCAGTGCATAGATGTACCCACTGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
||
| CDS-3UTR CCA 90 bp | TGGGCCAGAATGTCTTCTAGGAGCCAGATTGGTCCCATTGGGAATGACAGTGACTTTCCTTTGCTGCATTaGCACAGGCGTTGTGCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: WARMSSRSQIGPIGNDSDFPLLH*HRRCAY Trigger: ATAAGCACAACGCCTGTGCCAATGCAGCAAAGGAAA...GTCACTGTCATTCCCAATGGGACCAATCTGGCTCCTAGAAGACATTCTGGCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
||
| 3UTR CAA 72 bp | ACTAATTTTGGATTTGCTATGCAGACCAGGCTGGCCTaGAACACACTGAAATCCACCATGCTTCTGCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TNFGFAMQTRLA*NTLKSTMLLPG Trigger: CCCAGGCAGAAGCATGGTGGATTTCAGTGTGTTCAAGGCCAGCCTGGTCTGCATAGCAAATCCAAAATTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
||
| 3UTR CAA 72 bp | GTGTACCCTGGGCCAGAATGTCTTCTAGGAGCCAGATaGGTCCCATTGGGAATGACAGTGACTACTAATAGA | + |
|
Preference number: 4 (lower is better) Translates to: VYPGPECLLGAR*VPLGMTVTTNR Trigger: TCTATTAGTAGTCACTGTCATTCCCAATGGGACCAATCTGGCTCCTAGAAGACATTCTGGCCCAGGGTACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
||
| CDS-3UTR TCA 90 bp | TGGTATAAATCAGAGAGACTCAGTACACTGTCAGGGTCTCTCTCTGTCTTTGATTGTTCTGCAGCCCTGTaGCTCCCTGTGGTGATAGCT | + |
|
Preference number: 4 (lower is better) Translates to: WYKSERLSTLSGSLSVFDCSAAL*LPVVIA Trigger: AGCTATCACCACAGGGAGTCACAGGGCTGCAGAACA...ATCAAAGACAGAGAGAGACCCTGACAGTGTACTGAGTCTCTCTGATTTATACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
||
| CDS-3UTR GCA 90 bp | TTTGCAGAAGAGAAGAGCAAACAACCAAGGGACCAAATGTCTTTTCCTTTCCCTGCACTGAGAGTGTTCTaGAGCCCTGTGACTCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FAEEKSKQPRDQMSFPFPALRVF*SPVTPC Trigger: ACAGGGAGTCACAGGGCTGCAGAACACTCTCAGTGC...AGGGAAAGGAAAAGACATTTGGTCCCTTGGTTGTTTGCTCTTCTCTTCTGCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
||
| CDS-3UTR GCA 90 bp | GTGTGTACAGGTGTCTTGGTGCACACTTATAATGGTCAGAGGTCAATTTGTGTGGCCTGCCTTTTCCTTTaGTGCATTGGCACAGGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: VCTGVLVHTYNGQRSICVACLFL*CIGTGV Trigger: AACGCCTGTGCCAATGCAGCAAAGGAAAAGGCAGGC...CACACAAATTGACCTCTGACCATTATAAGTGTGCACCAAGACACCTGTACACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
||
| CDS-3UTR CCA 90 bp | TGGGCCAGAATGTCTTCTAGGAGCCAGATTGGTCCCATTGGGAATGACAGTGACAAAACCCGTATGATTTaGATGCCAGGTGCCAAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: WARMSSRSQIGPIGNDSDKTRMI*MPGAKV Trigger: AACTTTGGCACCTGGCATCCAAATCATACGGGTTTT...GTCACTGTCATTCCCAATGGGACCAATCTGGCTCCTAGAAGACATTCTGGCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
||
| CDS-3UTR TCA 90 bp | GTCCAGTGGGTACATCTATGCACTGCTGTATTTGTTGGCTACAATTACAGTTGTCACATAACCAGTTCCTaGGCAGAAGACAGGGTAGCG | + |
|
Preference number: 4 (lower is better) Translates to: VQWVHLCTAVFVGYNYSCHITSS*AEDRVA Trigger: CGCTACCCTGTCTTCTGCTCAGGAACTGGTTATGTG...ACAACTGTAATTGTAGCCAACAAATACAGCAGTGCATAGATGTACCCACTGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
||
| 3UTR CAA 72 bp | GGGCCAGAATGTCTTCTAGGAGCCAGATTGGTCCCATaGGGAATGACAGTGACTACTAATAGATTAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GPECLLGARLVP*GMTVTTNRLAA Trigger: AGCTGCTAATCTATTAGTAGTCACTGTCATTCCCAATGGGACCAATCTGGCTCCTAGAAGACATTCTGGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
||
| CDS-3UTR GCA 90 bp | CCAGATACACTGCTTCCACAGTCAGTAAGTAGTGTGCGGTGTTGTTATTGGTATGATTTGGATGCCAGGTaGCAAAGTTTCATTGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PDTLLPQSVSSVRCCYWYDLDAR*QSFIAP Trigger: TGGGGCAATGAAACTTTGGCACCTGGCATCCAAATC...ATACCAATAACAACACCGCACACTACTTACTGACTGTGGAAGCAGTGTATCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
||
| CDS-3UTR GCA 90 bp | TGGTATAAATCAGAGAGACTCAGTACACTGTCAGGGTCTCTCTCTGTCTTTGATTGCCTTTTCCTTTGCTaGATTGGCACAGGCGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: WYKSERLSTLSGSLSVFDCLFLC*IGTGVV Trigger: CACAACGCCTGTGCCAATGCAGCAAAGGAAAAGGCA...ATCAAAGACAGAGAGAGACCCTGACAGTGTACTGAGTCTCTCTGATTTATACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
||
| CDS-3UTR CCA 90 bp | CCAGATACACTGCTTCCACAGTCAGTAAGTAGTGTGCGGTGTTGTTATTGGTATCTACTTCTTTCCAGATaGTCCGAAGGGAGCTATGGT | + |
|
Preference number: 4 (lower is better) Translates to: PDTLLPQSVSSVRCCYWYLLLSR*SEGSYG Trigger: ACCATAGCTCCCTTCGGACCATCTGGAAAGAAGTAG...ATACCAATAACAACACCGCACACTACTTACTGACTGTGGAAGCAGTGTATCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
||
| 3UTR CAA 72 bp | GTCGGAGTTGATAAAACCCTGAGTTGGGACCACACCTaGATGAAACTGCATGATGAGATGTATCTATCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VGVDKTLSWDHT*MKLHDEMYLSP Trigger: GGGAGATAGATACATCTCATCATGCAGTTTCATCAAGGTGTGGTCCCAACTCAGGGTTTTATCAACTCCGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
||
| CDS-3UTR GCA 90 bp | GTCCAGTGGGTACATCTATGCACTGCTGTATTTGTTGGCTACAATTACAGTTGTGCTCCAGGTCATTTTTaGAAAGCAGCAGTGTCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VQWVHLCTAVFVGYNYSCAPGHF*KAAVSS Trigger: AGACGACACTGCTGCTTTGCAAAAATGACCTGGAGC...ACAACTGTAATTGTAGCCAACAAATACAGCAGTGCATAGATGTACCCACTGGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
||
| CDS-3UTR TCA 90 bp | GTGTGTACAGGTGTCTTGGTGCACACTTATAATGGTCAGAGGTCAATTTGTGTGTCACAGGATTTTCTTTaGATCCTGGTCTACCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: VCTGVLVHTYNGQRSICVSQDFL*ILVYLV Trigger: TACCAGGTAGACCAGGATTCAAAGAAAATCCTGTGA...CACACAAATTGACCTCTGACCATTATAAGTGTGCACCAAGACACCTGTACACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
||
| CDS-3UTR GCA 90 bp | GTCCAGTGGGTACATCTATGCACTGCTGTATTTGTTGGCTACAATTACAGTTGTCCGTATAGCTCTTCTTaGTTCGATTTGTCCAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VQWVHLCTAVFVGYNYSCPYSSS*FDLSRF Trigger: GAACCTGGACAAATCGAAGCAAGAAGAGCTATACGG...ACAACTGTAATTGTAGCCAACAAATACAGCAGTGCATAGATGTACCCACTGGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
||
| CDS-3UTR CCA 90 bp | CCAGATACACTGCTTCCACAGTCAGTAAGTAGTGTGCGGTGTTGTTATTGGTATGTCCGAAGGGAGCTATaGTTTGTCTCACTTTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: PDTLLPQSVSSVRCCYWYVRREL*FVSLFV Trigger: TACAAAAAGTGAGACAAACCATAGCTCCCTTCGGAC...ATACCAATAACAACACCGCACACTACTTACTGACTGTGGAAGCAGTGTATCTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
||
| CDS-3UTR CCA 90 bp | GTCCAGTGGGTACATCTATGCACTGCTGTATTTGTTGGCTACAATTACAGTTGTACTTGGGTAAAGGTCTaGTGGCATGTACCACTTACT | + |
|
Preference number: 4 (lower is better) Translates to: VQWVHLCTAVFVGYNYSCTWVKV*WHVPLT Trigger: AGTAAGTGGTACATGCCACCAGACCTTTACCCAAGT...ACAACTGTAATTGTAGCCAACAAATACAGCAGTGCATAGATGTACCCACTGGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
||
| CDS-3UTR TCA 90 bp | TGGTATAAATCAGAGAGACTCAGTACACTGTCAGGGTCTCTCTCTGTCTTTGATGCTGTATTTACAGCTTaGATAAGAAACTCGCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: WYKSERLSTLSGSLSVFDAVFTA*IRNSPV Trigger: CACTGGCGAGTTTCTTATTCAAGCTGTAAATACAGC...ATCAAAGACAGAGAGAGACCCTGACAGTGTACTGAGTCTCTCTGATTTATACCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
||
| CDS-3UTR GCA 90 bp | TGGTATAAATCAGAGAGACTCAGTACACTGTCAGGGTCTCTCTCTGTCTTTGATATGTGGACAGTATGTTaGAACCCAGTTCATACCCAT | + |
|
Preference number: 4 (lower is better) Translates to: WYKSERLSTLSGSLSVFDMWTVC*NPVHTH Trigger: ATGGGTATGAACTGGGTTGCAACATACTGTCCACAT...ATCAAAGACAGAGAGAGACCCTGACAGTGTACTGAGTCTCTCTGATTTATACCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
||
| CDS-3UTR CCA 90 bp | TCTTTCATCGCAGACTTGTTTTTAGTGATGTGTGTACTAGATGGGTCAGATGAATGGGTAAAGGTCTGGTaGCATGTACCACTTACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SFIADLFLVMCVLDGSDEWVKVW*HVPLTV Trigger: GACAGTAAGTGGTACATGCCACCAGACCTTTACCCA...TTCATCTGACCCATCTAGTACACACATCACTAAAAACAAGTCTGCGATGAAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
||
| 3UTR CAA 72 bp | GGCTACAATTACAGTTGTGAAATTTCTAAGTGTCACTaGCCTACTGTTAGCAGATGTAACCCAGGGCCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: GYNYSCEISKCH*PTVSRCNPGPK Trigger: TTTAGGCCCTGGGTTACATCTGCTAACAGTAGGCAAGTGACACTTAGAAATTTCACAACTGTAATTGTAGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
||
| CDS-3UTR TCA 90 bp | TGGTATAAATCAGAGAGACTCAGTACACTGTCAGGGTCTCTCTCTGTCTTTGATTTAAGTATTCTGTGTTaGCAAACATGTCACTGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: WYKSERLSTLSGSLSVFDLSILC*QTCHCP Trigger: CGGACAGTGACATGTTTGTCAACACAGAATACTTAA...ATCAAAGACAGAGAGAGACCCTGACAGTGTACTGAGTCTCTCTGATTTATACCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
||
| CDS-3UTR GCA 90 bp | TCTTTCATCGCAGACTTGTTTTTAGTGATGTGTGTACTAGATGGGTCAGATGAATCATTGCCCCAAGTTTaGCGTATAGCTCTTCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SFIADLFLVMCVLDGSDESLPQV*RIALLA Trigger: AGCAAGAAGAGCTATACGGCAAACTTGGGGCAATGA...TTCATCTGACCCATCTAGTACACACATCACTAAAAACAAGTCTGCGATGAAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
||
| CDS-3UTR GCA 90 bp | GTGTGTACAGGTGTCTTGGTGCACACTTATAATGGTCAGAGGTCAATTTGTGTGTATACATCTTCCAAGTaGAAACGACGGATACCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: VCTGVLVHTYNGQRSICVYTSSK*KRRIPK Trigger: TTTAGGTATCCGTCGTTTGCACTTGGAAGATGTATA...CACACAAATTGACCTCTGACCATTATAAGTGTGCACCAAGACACCTGTACACAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
||
| CDS-3UTR GCA 90 bp | CCAGATACACTGCTTCCACAGTCAGTAAGTAGTGTGCGGTGTTGTTATTGGTATGCTTTCTTCTTGAATTaGATGTTGAAGATAGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: PDTLLPQSVSSVRCCYWYAFFLN*MLKIAI Trigger: AATGGCTATCTTCAACATGCAATTCAAGAAGAAAGC...ATACCAATAACAACACCGCACACTACTTACTGACTGTGGAAGCAGTGTATCTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
||
| CDS-3UTR CCA 90 bp | TTTGCAGAAGAGAAGAGCAAACAACCAAGGGACCAAATGTCTTTTCCTTTCCCTGAAATGGTAAGAGTTTaGATGTCCAGTTCCTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FAEEKSKQPRDQMSFPFPEMVRV*MSSSFF Trigger: GAAAAAGGAACTGGACATCCAAACTCTTACCATTTC...AGGGAAAGGAAAAGACATTTGGTCCCTTGGTTGTTTGCTCTTCTCTTCTGCAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
||
| 3UTR CAA 72 bp | TGGTCCAGTGGGTACATCTATGCACTGCTGTATTTGTaGGCTACAATTACAGTTGTGAAATTTCTAAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: WSSGYIYALLYL*ATITVVKFLSV Trigger: GACACTTAGAAATTTCACAACTGTAATTGTAGCCAACAAATACAGCAGTGCATAGATGTACCCACTGGACCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
||
| CDS-3UTR GCA 90 bp | TCTTTCATCGCAGACTTGTTTTTAGTGATGTGTGTACTAGATGGGTCAGATGAATTGGCACAGGCGTTGTaGTTATTTTGTTGTAAATGG | + |
|
Preference number: 4 (lower is better) Translates to: SFIADLFLVMCVLDGSDELAQAL*LFCCKW Trigger: CCATTTACAACAAAATAAGCACAACGCCTGTGCCAA...TTCATCTGACCCATCTAGTACACACATCACTAAAAACAAGTCTGCGATGAAAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| 3UTR CAA 72 bp | AACTGGTCCAGTGGGTACATCTATGCACTGCTGTATTaGTTGGCTACAATTACAGTTGTGAAATTTCTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: NWSSGYIYALLY*LATITVVKFLS Trigger: ACTTAGAAATTTCACAACTGTAATTGTAGCCAACAAATACAGCAGTGCATAGATGTACCCACTGGACCAGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| 3UTR CAA 72 bp | CTTCCTGTTTTAGCTGTTCTTTCTTTCATCGCAGACTaGTTTTTAGTGATGTGTGTACTAGATGGGTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LPVLAVLSFIAD*FLVMCVLDGSD Trigger: ATCTGACCCATCTAGTACACACATCACTAAAAACAAGTCTGCGATGAAAGAAAGAACAGCTAAAACAGGAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| 3UTR CAA 72 bp | TTCTCTTCCAAACCCTTGCTCACACTACTGTTTTTATaGGCCTCTTGTTTACATTGTATTAGTTCTTATCCA | + |
|
Preference number: 4 (lower is better) Translates to: FSSKPLLTLLFL*ASCLHCISSYP Trigger: TGGATAAGAACTAATACAATGTAAACAAGAGGCCAATAAAAACAGTAGTGTGAGCAAGGGTTTGGAAGAGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| 3UTR CAA 72 bp | GGATACACTGTTTCAAAGTTACTGGGCTTGTGTTTATaGATGTTACAATTCATGATAGGGCCAAATGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: GYTVSKLLGLCL*MLQFMIGPNEI Trigger: TATTTCATTTGGCCCTATCATGAATTGTAACATCAATAAACACAAGCCCAGTAACTTTGAAACAGTGTATCC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| 3UTR CAA 72 bp | ATATACATAGGATACACTGTTTCAAAGTTACTGGGCTaGTGTTTATTGATGTTACAATTCATGATAGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: IYIGYTVSKLLG*CLLMLQFMIGP Trigger: TGGCCCTATCATGAATTGTAACATCAATAAACACAAGCCCAGTAACTTTGAAACAGTGTATCCTATGTATAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| CDS-3UTR CAA 90 bp | TGGGCCAGAATGTCTTCTAGGAGCCAGATTGGTCCCATTGGGAATGACAGTGACGGCTCCAGGTCATTTTaGCAAAGCAGCAGTGTCGTC | + |
|
Preference number: 5 (lower is better) Translates to: WARMSSRSQIGPIGNDSDGSRSF*QSSSVV Trigger: GACGACACTGCTGCTTTGCAAAAATGACCTGGAGCC...GTCACTGTCATTCCCAATGGGACCAATCTGGCTCCTAGAAGACATTCTGGCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| CDS-3UTR CAA 90 bp | TGGGCCAGAATGTCTTCTAGGAGCCAGATTGGTCCCATTGGGAATGACAGTGACTGTTACTGGAGTTGCTaGCTGTGTGAGGCCTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: WARMSSRSQIGPIGNDSDCYWSC*LCEASE Trigger: CTCTGAGGCCTCACACAGCAAGCAACTCCAGTAACA...GTCACTGTCATTCCCAATGGGACCAATCTGGCTCCTAGAAGACATTCTGGCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| CDS TCA 90 bp | AAATATCTTCTCTGCCAGATCCCCAGAAAACACATAACCAGTTCCTaGGCAGAAGACAGGGTAGCGCTCACTTGGGTAAAGGTCTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: KYLLCQIPRKHITSS*AEDRVALTWVKVWW Trigger: CCACCAGACCTTTACCCAAGTGAGCGCTACCCTGTCTTCTGCTCAGGAACTGGTTATGTGTTTTCTGGGGATCTGGCAGAGAAGATATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| CDS-3UTR CAA 90 bp | TGGGCCAGAATGTCTTCTAGGAGCCAGATTGGTCCCATTGGGAATGACAGTGACGTCACAGGATTTTCTTaGAATCCTGGTCTACCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: WARMSSRSQIGPIGNDSDVTGFS*NPGLPG Trigger: ACCAGGTAGACCAGGATTCAAAGAAAATCCTGTGAC...GTCACTGTCATTCCCAATGGGACCAATCTGGCTCCTAGAAGACATTCTGGCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| CDS GCA 90 bp | CGTATGATTTGGATGCCAGGTGCCAAAGTTTCATTGCCCCAAGTTTaGCGTATAGCTCTTCTTGCTTCGATTTGTCCAGGTTCTGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: RMIWMPGAKVSLPQV*RIALLASICPGSAA Trigger: AGCTGCAGAACCTGGACAAATCGAAGCAAGAAGAGCTATACGGCAAACTTGGGGCAATGAAACTTTGGCACCTGGCATCCAAATCATACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| CDS-3UTR CAA 90 bp | TGGGCCAGAATGTCTTCTAGGAGCCAGATTGGTCCCATTGGGAATGACAGTGACGCATTGGCACAGGCGTaGTGCTTATTTTGTTGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: WARMSSRSQIGPIGNDSDALAQA*CLFCCK Trigger: TTTACAACAAAATAAGCACAACGCCTGTGCCAATGC...GTCACTGTCATTCCCAATGGGACCAATCTGGCTCCTAGAAGACATTCTGGCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| CDS-3UTR CAA 90 bp | GTCCAGTGGGTACATCTATGCACTGCTGTATTTGTTGGCTACAATTACAGTTGTTGCCTGCCTTTTCCTTaGCTGCATTGGCACAGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: VQWVHLCTAVFVGYNYSCCLPFP*LHWHRR Trigger: ACGCCTGTGCCAATGCAGCAAAGGAAAAGGCAGGCA...ACAACTGTAATTGTAGCCAACAAATACAGCAGTGCATAGATGTACCCACTGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| CDS-3UTR CAA 90 bp | TCTTTCATCGCAGACTTGTTTTTAGTGATGTGTGTACTAGATGGGTCAGATGAACAGGGTAGCGCTCACTaGGGTAAAGGTCTGGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SFIADLFLVMCVLDGSDEQGSAH*GKGLVA Trigger: TGCCACCAGACCTTTACCCAAGTGAGCGCTACCCTG...TTCATCTGACCCATCTAGTACACACATCACTAAAAACAAGTCTGCGATGAAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| CDS-3UTR CAA 90 bp | TTTGCAGAAGAGAAGAGCAAACAACCAAGGGACCAAATGTCTTTTCCTTTCCCTTTGAACACGAACTCATaGGGAGGGGGCACAGGATCA | + |
|
Preference number: 5 (lower is better) Translates to: FAEEKSKQPRDQMSFPFPLNTNS*GGGTGS Trigger: TGATCCTGTGCCCCCTCCCAATGAGTTCGTGTTCAA...AGGGAAAGGAAAAGACATTTGGTCCCTTGGTTGTTTGCTCTTCTCTTCTGCAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| CDS CCA 90 bp | GTAGTTTGCGGTGTCGATACCTGCCTGCCTTTTCCTTTGCTGCATTaGCACAGGCGTTGTGCTTATTTTGTTGTAAATGGTTCCAGTATT | + |
|
Preference number: 5 (lower is better) Translates to: VVCGVDTCLPFPLLH*HRRCAYFVVNGSSI Trigger: AATACTGGAACCATTTACAACAAAATAAGCACAACGCCTGTGCCAATGCAGCAAAGGAAAAGGCAGGCAGGTATCGACACCGCAAACTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| CDS-3UTR CAA 90 bp | CCAGATACACTGCTTCCACAGTCAGTAAGTAGTGTGCGGTGTTGTTATTGGTATGGTGCCAAAGTTTCATaGCCCCAAGTTTGCCGTATA | + |
|
Preference number: 5 (lower is better) Translates to: PDTLLPQSVSSVRCCYWYGAKVS*PQVCRI Trigger: TATACGGCAAACTTGGGGCAATGAAACTTTGGCACC...ATACCAATAACAACACCGCACACTACTTACTGACTGTGGAAGCAGTGTATCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| CDS-3UTR CAA 90 bp | TGGGCCAGAATGTCTTCTAGGAGCCAGATTGGTCCCATTGGGAATGACAGTGACATTAAGTATTCTGTGTaGACAAACATGTCACTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: WARMSSRSQIGPIGNDSDIKYSV*TNMSLS Trigger: GGACAGTGACATGTTTGTCAACACAGAATACTTAAT...GTCACTGTCATTCCCAATGGGACCAATCTGGCTCCTAGAAGACATTCTGGCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| CDS-3UTR CAA 90 bp | GTGTGTACAGGTGTCTTGGTGCACACTTATAATGGTCAGAGGTCAATTTGTGTGGGATCAACTCTCAACTaGGCAAGACAGATCCCTACA | + |
|
Preference number: 5 (lower is better) Translates to: VCTGVLVHTYNGQRSICVGSTLN*ARQIPT Trigger: TGTAGGGATCTGTCTTGCCAAGTTGAGAGTTGATCC...CACACAAATTGACCTCTGACCATTATAAGTGTGCACCAAGACACCTGTACACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| CDS-3UTR CAA 90 bp | TGGTATAAATCAGAGAGACTCAGTACACTGTCAGGGTCTCTCTCTGTCTTTGATTTCATTGCCCCAAGTTaGCCGTATAGCTCTTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: WYKSERLSTLSGSLSVFDFIAPS*PYSSSC Trigger: GCAAGAAGAGCTATACGGCAAACTTGGGGCAATGAA...ATCAAAGACAGAGAGAGACCCTGACAGTGTACTGAGTCTCTCTGATTTATACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| CDS-3UTR CAA 90 bp | TTTGCAGAAGAGAAGAGCAAACAACCAAGGGACCAAATGTCTTTTCCTTTCCCTTCTTCTTGCTTCGATTaGTCCAGGTTCTGCAGCTAT | + |
|
Preference number: 5 (lower is better) Translates to: FAEEKSKQPRDQMSFPFPSSCFD*SRFCSY Trigger: ATAGCTGCAGAACCTGGACAAATCGAAGCAAGAAGA...AGGGAAAGGAAAAGACATTTGGTCCCTTGGTTGTTTGCTCTTCTCTTCTGCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| CDS-3UTR CAA 90 bp | CCAGATACACTGCTTCCACAGTCAGTAAGTAGTGTGCGGTGTTGTTATTGGTATTACCACTTACTGTCTTaGTTTCTGTTCGGTGCATAT | + |
|
Preference number: 5 (lower is better) Translates to: PDTLLPQSVSSVRCCYWYYHLLS*FLFGAY Trigger: ATATGCACCGAACAGAAACAAAGACAGTAAGTGGTA...ATACCAATAACAACACCGCACACTACTTACTGACTGTGGAAGCAGTGTATCTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| CDS-3UTR CAA 90 bp | CCAGATACACTGCTTCCACAGTCAGTAAGTAGTGTGCGGTGTTGTTATTGGTATTATCAGTTCACTAGGTaGGAACTGATGAGAGGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: PDTLLPQSVSSVRCCYWYYQFTR*ELMRGN Trigger: ATTACCTCTCATCAGTTCCAACCTAGTGAACTGATA...ATACCAATAACAACACCGCACACTACTTACTGACTGTGGAAGCAGTGTATCTGG 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| CDS-3UTR CAA 90 bp | TGTTCTTTCTTTCATCGCAGACTTGTTTTTAGTGATGTGTGTACTAGATGGGTCTTTTCCTTTGCTGCATaGGCACAGGCGTTGTGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: CSFFHRRLVFSDVCTRWVFSFAA*AQALCL Trigger: TAAGCACAACGCCTGTGCCAATGCAGCAAAGGAAAA...GACCCATCTAGTACACACATCACTAAAAACAAGTCTGCGATGAAAGAAAGAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| CDS-3UTR CAA 90 bp | TGTTCTTTCTTTCATCGCAGACTTGTTTTTAGTGATGTGTGTACTAGATGGGTCTATGTGGACAGTATGTaGCAACCCAGTTCATACCCA | + |
|
Preference number: 5 (lower is better) Translates to: CSFFHRRLVFSDVCTRWVYVDSM*QPSSYP Trigger: TGGGTATGAACTGGGTTGCAACATACTGTCCACATA...GACCCATCTAGTACACACATCACTAAAAACAAGTCTGCGATGAAAGAAAGAACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| CDS-3UTR CAA 90 bp | GTCCAGTGGGTACATCTATGCACTGCTGTATTTGTTGGCTACAATTACAGTTGTCTGTCTGCTTTCTTCTaGAATTGCATGTTGAAGATA | + |
|
Preference number: 5 (lower is better) Translates to: VQWVHLCTAVFVGYNYSCLSAFF*NCMLKI Trigger: TATCTTCAACATGCAATTCAAGAAGAAAGCAGACAG...ACAACTGTAATTGTAGCCAACAAATACAGCAGTGCATAGATGTACCCACTGGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| CDS-3UTR CAA 90 bp | TCTTTCATCGCAGACTTGTTTTTAGTGATGTGTGTACTAGATGGGTCAGATGAAAAATGGACTTTTCTCTaGGCATTTTTCAGGCTCATT | + |
|
Preference number: 5 (lower is better) Translates to: SFIADLFLVMCVLDGSDEKWTFL*AFFRLI Trigger: AATGAGCCTGAAAAATGCCAAGAGAAAAGTCCATTT...TTCATCTGACCCATCTAGTACACACATCACTAAAAACAAGTCTGCGATGAAAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| CDS-3UTR CAA 90 bp | TCTTTCATCGCAGACTTGTTTTTAGTGATGTGTGTACTAGATGGGTCAGATGAATGCTTTCTTCTTGAATaGCATGTTGAAGATAGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: SFIADLFLVMCVLDGSDECFLLE*HVEDSH Trigger: ATGGCTATCTTCAACATGCAATTCAAGAAGAAAGCA...TTCATCTGACCCATCTAGTACACACATCACTAAAAACAAGTCTGCGATGAAAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| CDS CAA 72 bp | CTCCCTGTGGTGATAGCTCGGTGTTACTGGAGTTGCTaGCTGTGTGAGGCCTCAGAGTCTGAGGAGCTACTT | + |
|
Preference number: 6 (lower is better) Translates to: LPVVIARCYWSC*LCEASESEELL Trigger: AAGTAGCTCCTCAGACTCTGAGGCCTCACACAGCAAGCAACTCCAGTAACACCGAGCTATCACCACAGGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| CDS GCA 72 bp | CCGGAGCAGAGACCTCTTAGGGCTCCAGGTCATTTTTaGAAAGCAGCAGTGTCGTCTTCTCCACTGAAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: PEQRPLRAPGHF*KAAVSSSPLKH Trigger: ATGCTTCAGTGGAGAAGACGACACTGCTGCTTTGCAAAAATGACCTGGAGCCCTAAGAGGTCTCTGCTCCGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| CDS TCA 72 bp | CTCTGCCAGATCCCCAGAAAACACATAACCAGTTCCTaGGCAGAAGACAGGGTAGCGCTCACTTGGGTAAAG | + |
|
Preference number: 6 (lower is better) Translates to: LCQIPRKHITSS*AEDRVALTWVK Trigger: CTTTACCCAAGTGAGCGCTACCCTGTCTTCTGCTCAGGAACTGGTTATGTGTTTTCTGGGGATCTGGCAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| CDS CAA 72 bp | AACCAGTTCCTGAGCAGAAGACAGGGTAGCGCTCACTaGGGTAAAGGTCTGGTGGCATGTACCACTTACTGT | + |
|
Preference number: 6 (lower is better) Translates to: NQFLSRRQGSAH*GKGLVACTTYC Trigger: ACAGTAAGTGGTACATGCCACCAGACCTTTACCCAAGTGAGCGCTACCCTGTCTTCTGCTCAGGAACTGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| CDS CCA 72 bp | GAGGCCTCAGAGTCTGAGGAGCTACTTCTTTCCAGATaGTCCGAAGGGAGCTATGGTTTGTCTCACTTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: EASESEELLLSR*SEGSYGLSHFL Trigger: CAAAAAGTGAGACAAACCATAGCTCCCTTCGGACCATCTGGAAAGAAGTAGCTCCTCAGACTCTGAGGCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| CDS CCA 72 bp | GAAGACAGGGTAGCGCTCACTTGGGTAAAGGTCTGGTaGCATGTACCACTTACTGTCTTTGTTTCTGTTCGG | + |
|
Preference number: 6 (lower is better) Translates to: EDRVALTWVKVW*HVPLTVFVSVR Trigger: CCGAACAGAAACAAAGACAGTAAGTGGTACATGCCACCAGACCTTTACCCAAGTGAGCGCTACCCTGTCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| CDS CAA 90 bp | CCGTATGATTTGGATGCCAGGTGCCAAAGTTTCATTGCCCCAAGTTaGCCGTATAGCTCTTCTTGCTTCGATTTGTCCAGGTTCTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PYDLDARCQSFIAPS*PYSSSCFDLSRFCS Trigger: GCTGCAGAACCTGGACAAATCGAAGCAAGAAGAGCTATACGGCAAACTTGGGGCAATGAAACTTTGGCACCTGGCATCCAAATCATACGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| CDS GCA 72 bp | TGGATGCCAGGTGCCAAAGTTTCATTGCCCCAAGTTTaGCGTATAGCTCTTCTTGCTTCGATTTGTCCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: WMPGAKVSLPQV*RIALLASICPG Trigger: ACCTGGACAAATCGAAGCAAGAAGAGCTATACGGCAAACTTGGGGCAATGAAACTTTGGCACCTGGCATCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| CDS CCA 72 bp | GCAGAAGACAGGGTAGCGCTCACTTGGGTAAAGGTCTaGTGGCATGTACCACTTACTGTCTTTGTTTCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: AEDRVALTWVKV*WHVPLTVFVSV Trigger: AACAGAAACAAAGACAGTAAGTGGTACATGCCACCAGACCTTTACCCAAGTGAGCGCTACCCTGTCTTCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| CDS CAA 72 bp | TTGGATGCCAGGTGCCAAAGTTTCATTGCCCCAAGTTaGCCGTATAGCTCTTCTTGCTTCGATTTGTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LDARCQSFIAPS*PYSSSCFDLSR Trigger: CCTGGACAAATCGAAGCAAGAAGAGCTATACGGCAAACTTGGGGCAATGAAACTTTGGCACCTGGCATCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| CDS CAA 72 bp | ACCCGTATGATTTGGATGCCAGGTGCCAAAGTTTCATaGCCCCAAGTTTGCCGTATAGCTCTTCTTGCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: TRMIWMPGAKVS*PQVCRIALLAS Trigger: CGAAGCAAGAAGAGCTATACGGCAAACTTGGGGCAATGAAACTTTGGCACCTGGCATCCAAATCATACGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| CDS CAA 72 bp | GTAGTTTGCGGTGTCGATACCTGCCTGCCTTTTCCTTaGCTGCATTGGCACAGGCGTTGTGCTTATTTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: VVCGVDTCLPFP*LHWHRRCAYFV Trigger: AACAAAATAAGCACAACGCCTGTGCCAATGCAGCAAAGGAAAAGGCAGGCAGGTATCGACACCGCAAACTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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| CDS CAA 90 bp | AAAACACATAACCAGTTCCTGAGCAGAAGACAGGGTAGCGCTCACTaGGGTAAAGGTCTGGTGGCATGTACCACTTACTGTCTTTGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: KTHNQFLSRRQGSAH*GKGLVACTTYCLCF Trigger: GAAACAAAGACAGTAAGTGGTACATGCCACCAGACCTTTACCCAAGTGAGCGCTACCCTGTCTTCTGCTCAGGAACTGGTTATGTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
||
| CDS CAA 90 bp | TTGAACACGAACTCATTGGGAGGGGGCACAGGATCAACTCTCAACTaGGCAAGACAGATCCCTACATATACATCTTCCAAGTGCAAACGA | + |
|
Preference number: 6 (lower is better) Translates to: LNTNSLGGGTGSTLN*ARQIPTYTSSKCKR Trigger: TCGTTTGCACTTGGAAGATGTATATGTAGGGATCTGTCTTGCCAAGTTGAGAGTTGATCCTGTGCCCCCTCCCAATGAGTTCGTGTTCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
||
| CDS CCA 72 bp | GGAGCTACTTCTTTCCAGATGGTCCGAAGGGAGCTATaGTTTGTCTCACTTTTTGTAGAACGAAATCCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: GATSFQMVRREL*FVSLFVERNPR Trigger: CCGAGGATTTCGTTCTACAAAAAGTGAGACAAACCATAGCTCCCTTCGGACCATCTGGAAAGAAGTAGCTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
||
| CDS CAA 72 bp | AACTCATTGGGAGGGGGCACAGGATCAACTCTCAACTaGGCAAGACAGATCCCTACATATACATCTTCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: NSLGGGTGSTLN*ARQIPTYTSSK Trigger: CTTGGAAGATGTATATGTAGGGATCTGTCTTGCCAAGTTGAGAGTTGATCCTGTGCCCCCTCCCAATGAGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
||
| CDS CAA 90 bp | TGTAGTTTGCGGTGTCGATACCTGCCTGCCTTTTCCTTTGCTGCATaGGCACAGGCGTTGTGCTTATTTTGTTGTAAATGGTTCCAGTAT | + |
|
Preference number: 6 (lower is better) Translates to: CSLRCRYLPAFSFAA*AQALCLFCCKWFQY Trigger: ATACTGGAACCATTTACAACAAAATAAGCACAACGCCTGTGCCAATGCAGCAAAGGAAAAGGCAGGCAGGTATCGACACCGCAAACTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038252.4 |
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