Pregenerated sensors for B3GALT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034780Ensembl transcript IDs: ENSMUST00000042456.4, ENSMUST00000112346.3, ENSMUST00000180887.2
Found 142 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGGAGGCTAGCCAGCCATTGGAGCTCATAGGGTTTGAGGCTAGATaGTGGGACGGTGGCTCACCTTGTCTTGCTTCATCTTCTCCCAGG | + |
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Preference number: 1 (lower is better) Translates to: WEASQPLELIGFEAR*WDGGSPCLASSSPR Trigger: CCTGGGAGAAGATGAAGCAAGACAAGGTGAGCCACCGTCCCACCATCTAGCCTCAAACCCTATGAGCTCCAATGGCTGGCTAGCCTCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112346.3 |
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| 3UTR CCA 90 bp | GAGGCTAGCCAGCCATTGGAGCTCATAGGGTTTGAGGCTAGATGGTaGGACGGTGGCTCACCTTGTCTTGCTTCATCTTCTCCCAGGTCA | + |
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Preference number: 1 (lower is better) Translates to: EASQPLELIGFEARW*DGGSPCLASSSPRS Trigger: TGACCTGGGAGAAGATGAAGCAAGACAAGGTGAGCCACCGTCCCACCATCTAGCCTCAAACCCTATGAGCTCCAATGGCTGGCTAGCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112346.3 |
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| 3UTR CCA 90 bp | AAAAACCCAAAGAGCGAACAAACATGCTTAAGGCTATTGAGATACTaGACAAATGGCCTTGCCTCGTCAAGTTCCATGCAGAGGAAAATG | + |
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Preference number: 1 (lower is better) Translates to: KNPKSEQTCLRLLRY*TNGLASSSSMQRKM Trigger: CATTTTCCTCTGCATGGAACTTGACGAGGCAAGGCCATTTGTCCAGTATCTCAATAGCCTTAAGCATGTTTGTTCGCTCTTTGGGTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112346.3 |
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| 3UTR TCA 90 bp | AGAATTACTATTTACGTTTGCAGAGATGCTATGAGGGCATTACTGTaGGTTTCTATCTCCTGGCCCAGATCTTTATCTCAGATGCACAGT | + |
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Preference number: 1 (lower is better) Translates to: RITIYVCRDAMRALL*VSISWPRSLSQMHS Trigger: ACTGTGCATCTGAGATAAAGATCTGGGCCAGGAGATAGAAACTCACAGTAATGCCCTCATAGCATCTCTGCAAACGTAAATAGTAATTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
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| 3UTR CCA 90 bp | AAAGAGCGAACAAACATGCTTAAGGCTATTGAGATACTGGACAAATaGCCTTGCCTCGTCAAGTTCCATGCAGAGGAAAATGTTACATAT | + |
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Preference number: 1 (lower is better) Translates to: KERTNMLKAIEILDK*PCLVKFHAEENVTY Trigger: ATATGTAACATTTTCCTCTGCATGGAACTTGACGAGGCAAGGCCATTTGTCCAGTATCTCAATAGCCTTAAGCATGTTTGTTCGCTCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112346.3 |
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| 3UTR GCA 90 bp | GTGAGTTTCTATCTCCTGGCCCAGATCTTTATCTCAGATGCACAGTaGACCAATCCTGGCAGTTATTTAGAGTCACTTTTTGATATAAAT | + |
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Preference number: 1 (lower is better) Translates to: VSFYLLAQIFISDAQ*TNPGSYLESLFDIN Trigger: ATTTATATCAAAAAGTGACTCTAAATAACTGCCAGGATTGGTGCACTGTGCATCTGAGATAAAGATCTGGGCCAGGAGATAGAAACTCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
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| 3UTR TCA 90 bp | TTATTTTCAAAGAAAGAATTACTATTTACGTTTGCAGAGATGCTATaGGGGCATTACTGTGAGTTTCTATCTCCTGGCCCAGATCTTTAT | + |
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Preference number: 1 (lower is better) Translates to: LFSKKELLFTFAEML*GHYCEFLSPGPDLY Trigger: ATAAAGATCTGGGCCAGGAGATAGAAACTCACAGTAATGCCCTCATAGCATCTCTGCAAACGTAAATAGTAATTCTTTCTTTGAAAATAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
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| 3UTR CAA 90 bp | TGCTGCGAGGCCAAAGAGGCCCGAGGGTGGGAGGCTAGCCAGCCATaGGAGCTCATAGGGTTTGAGGCTAGATGGTGGGACGGTGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: CCEAKEARGWEASQP*ELIGFEARWWDGGS Trigger: TGAGCCACCGTCCCACCATCTAGCCTCAAACCCTATGAGCTCCAATGGCTGGCTAGCCTCCCACCCTCGGGCCTCTTTGGCCTCGCAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112346.3 |
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| 3UTR-3UTR TCA 90 bp | GAGGCCCGAGGGTGGGAGGCTAGCCAGCCATTGGAGCTCATAGGGTTTGAGGCTAATTCTTCACCAAAATaGGAGAGTGTGGGGGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: EARGWEASQPLELIGFEANSSPK*ESVGEK Trigger: TTTCTCCCCCACACTCTCTCATTTTGGTGAAGAATT...AGCCTCAAACCCTATGAGCTCCAATGGCTGGCTAGCCTCCCACCCTCGGGCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112346.3 |
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| 3UTR-3UTR GCA 90 bp | GAGATGCCTGTTCAAATGGTCCATATAAATTTGTGGCATCAATGGGATCCCAACGATCTTTATCTCAGATaGACAGTGCACCAATCCTGG | + |
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Preference number: 2 (lower is better) Translates to: EMPVQMVHINLWHQWDPNDLYLR*TVHQSW Trigger: CCAGGATTGGTGCACTGTGCATCTGAGATAAAGATC...GTTGGGATCCCATTGATGCCACAAATTTATATGGACCATTTGAACAGGCATCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
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| 3UTR-3UTR TCA 90 bp | GGTGAGGGTACTACATTTGGAGTCTCCTTGGTGGCATCATATAATATTTGTTCTGTACAACCCACCTGCTaGCCAGATTTAATTCTTGTG | + |
|
Preference number: 2 (lower is better) Translates to: GEGTTFGVSLVASYNICSVQPTC*PDLILV Trigger: CACAAGAATTAAATCTGGTCAGCAGGTGGGTTGTAC...AGAACAAATATTATATGATGCCACCAAGGAGACTCCAAATGTAGTACCCTCACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
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| 3UTR-3UTR TCA 90 bp | AAGAGAGCATTTCTTCTACTGGTAGCAGGGGCACATCTTTTAATAAGGTTGGTAGTACAACCCACCTGCTaGCCAGATTTAATTCTTGTG | + |
|
Preference number: 2 (lower is better) Translates to: KRAFLLLVAGAHLLIRLVVQPTC*PDLILV Trigger: CACAAGAATTAAATCTGGTCAGCAGGTGGGTTGTAC...TACCAACCTTATTAAAAGATGTGCCCCTGCTACCAGTAGAAGAAATGCTCTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
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| 3UTR-3UTR TCA 90 bp | AAGAGAGCATTTCTTCTACTGGTAGCAGGGGCACATCTTTTAATAAGGTTGGTAATGGAAGGAAGTAGGTaGGGGTACTACATTTGGAGT | + |
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Preference number: 2 (lower is better) Translates to: KRAFLLLVAGAHLLIRLVMEGSR*GYYIWS Trigger: ACTCCAAATGTAGTACCCTCACCTACTTCCTTCCAT...TACCAACCTTATTAAAAGATGTGCCCCTGCTACCAGTAGAAGAAATGCTCTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
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| 3UTR-3UTR CCA 90 bp | GGTGAGGGTACTACATTTGGAGTCTCCTTGGTGGCATCATATAATATTTGTTCTCTCTCACCATTTCTATaGCCGAGCCCAATACATGTA | + |
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Preference number: 2 (lower is better) Translates to: GEGTTFGVSLVASYNICSLSPFL*PSPIHV Trigger: TACATGTATTGGGCTCGGCCATAGAAATGGTGAGAG...AGAACAAATATTATATGATGCCACCAAGGAGACTCCAAATGTAGTACCCTCACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
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| 3UTR-3UTR CCA 90 bp | CAGATGGGCCTGTACAATTGCATCGTGCTTTCAACCAACATTTTACATTTCAAGTCTTTGAGTGACTTCTaGCACAGTAGGGCTGACATT | + |
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Preference number: 2 (lower is better) Translates to: QMGLYNCIVLSTNILHFKSLSDF*HSRADI Trigger: AATGTCAGCCCTACTGTGCCAGAAGTCACTCAAAGA...CTTGAAATGTAAAATGTTGGTTGAAAGCACGATGCAATTGTACAGGCCCATCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112346.3 |
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| 3UTR CAA 90 bp | TCTTATGAAACCATGATCTTCCTCTTGACAGATGGGCCTGTACAATaGCATCGTGCTTTCAACCAACATTTTACATTTCAAGACGAAGGG | + |
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Preference number: 2 (lower is better) Translates to: SYETMIFLLTDGPVQ*HRAFNQHFTFQDEG Trigger: CCCTTCGTCTTGAAATGTAAAATGTTGGTTGAAAGCACGATGCAATTGTACAGGCCCATCTGTCAAGAGGAAGATCATGGTTTCATAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112346.3 |
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| 3UTR-3UTR TCA 90 bp | AAGAGAGCATTTCTTCTACTGGTAGCAGGGGCACATCTTTTAATAAGGTTGGTATTTGCAGAGATGCTATaGGGGCATTACTGTGAGTTT | + |
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Preference number: 2 (lower is better) Translates to: KRAFLLLVAGAHLLIRLVFAEML*GHYCEF Trigger: AAACTCACAGTAATGCCCTCATAGCATCTCTGCAAA...TACCAACCTTATTAAAAGATGTGCCCCTGCTACCAGTAGAAGAAATGCTCTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
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| 3UTR-3UTR GCA 90 bp | CTGGTAGCAGGGGCACATCTTTTAATAAGGTTGGTACTCCTTAAAGATGTTCTCATTACTATTTACGTTTaGAGAGATGCTATGAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: LVAGAHLLIRLVLLKDVLITIYV*RDAMRA Trigger: TGCCCTCATAGCATCTCTGCAAACGTAAATAGTAAT...GAGAACATCTTTAAGGAGTACCAACCTTATTAAAAGATGTGCCCCTGCTACCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
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| 3UTR-3UTR CCA 90 bp | TGGACACCTAGATTTGCATTTTATCAATTGTTATGCATTATTTCTGGGCCTCCTCTCTCACCATTTCTATaGCCGAGCCCAATACATGTA | + |
|
Preference number: 2 (lower is better) Translates to: WTPRFAFYQLLCIISGPPLSPFL*PSPIHV Trigger: TACATGTATTGGGCTCGGCCATAGAAATGGTGAGAG...AGGAGGCCCAGAAATAATGCATAACAATTGATAAAATGCAAATCTAGGTGTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
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| 3UTR-3UTR TCA 90 bp | TGGACACCTAGATTTGCATTTTATCAATTGTTATGCATTATTTCTGGGCCTCCTTTTGCAGAGATGCTATaGGGGCATTACTGTGAGTTT | + |
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Preference number: 2 (lower is better) Translates to: WTPRFAFYQLLCIISGPPFAEML*GHYCEF Trigger: AAACTCACAGTAATGCCCTCATAGCATCTCTGCAAA...AGGAGGCCCAGAAATAATGCATAACAATTGATAAAATGCAAATCTAGGTGTCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
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| 3UTR-3UTR TCA 90 bp | CAGATGGGCCTGTACAATTGCATCGTGCTTTCAACCAACATTTTACATTTCAAGAGGAAAGGTAGAAAATaGATTCCACACACTGTACAT | + |
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Preference number: 2 (lower is better) Translates to: QMGLYNCIVLSTNILHFKRKGRK*IPHTVH Trigger: ATGTACAGTGTGTGGAATTCATTTTCTACCTTTCCT...CTTGAAATGTAAAATGTTGGTTGAAAGCACGATGCAATTGTACAGGCCCATCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112346.3 |
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| 3UTR-3UTR GCA 90 bp | ACATTCCCATCTTTTTCGTCATTGATGCCCTACTCTAGGGATAAAATCAATTATATTACTATTTACGTTTaGAGAGATGCTATGAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: TFPSFSSLMPYSRDKINYITIYV*RDAMRA Trigger: TGCCCTCATAGCATCTCTGCAAACGTAAATAGTAAT...ATAATTGATTTTATCCCTAGAGTAGGGCATCAATGACGAAAAAGATGGGAATGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
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| 3UTR-3UTR CCA 90 bp | TGGACACCTAGATTTGCATTTTATCAATTGTTATGCATTATTTCTGGGCCTCCTCATTTGGAGTCTCCTTaGTGGCATCATATAATATTT | + |
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Preference number: 2 (lower is better) Translates to: WTPRFAFYQLLCIISGPPHLESP*WHHIIF Trigger: AAATATTATATGATGCCACCAAGGAGACTCCAAATG...AGGAGGCCCAGAAATAATGCATAACAATTGATAAAATGCAAATCTAGGTGTCCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
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| 3UTR GCA 72 bp | AGGGCAGGAGACAGAGACTGCATTCAGCTTTGCTGCTaGGAGGCCAAAGAGGCCCGAGGGTGGGAGGCTAGC | + |
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Preference number: 3 (lower is better) Translates to: RAGDRDCIQLCC*EAKEARGWEAS Trigger: GCTAGCCTCCCACCCTCGGGCCTCTTTGGCCTCGCAGCAGCAAAGCTGAATGCAGTCTCTGTCTCCTGCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112346.3 |
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| 3UTR GCA 72 bp | AAGGCCAGGGCAGGAGACAGAGACTGCATTCAGCTTTaGTGCTGCGAGGCCAAAGAGGCCCGAGGGTGGGAG | + |
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Preference number: 3 (lower is better) Translates to: KARAGDRDCIQL*CCEAKEARGWE Trigger: CTCCCACCCTCGGGCCTCTTTGGCCTCGCAGCAGCAAAGCTGAATGCAGTCTCTGTCTCCTGCCCTGGCCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112346.3 |
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| 3UTR CCA 72 bp | CAGCTTTGCTGCTGCGAGGCCAAAGAGGCCCGAGGGTaGGAGGCTAGCCAGCCATTGGAGCTCATAGGGTTT | + |
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Preference number: 3 (lower is better) Translates to: QLCCCEAKEARG*EASQPLELIGF Trigger: AAACCCTATGAGCTCCAATGGCTGGCTAGCCTCCCACCCTCGGGCCTCTTTGGCCTCGCAGCAGCAAAGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112346.3 |
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| 3UTR CCA 72 bp | AGCCAGCCATTGGAGCTCATAGGGTTTGAGGCTAGATaGTGGGACGGTGGCTCACCTTGTCTTGCTTCATCT | + |
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Preference number: 3 (lower is better) Translates to: SQPLELIGFEAR*WDGGSPCLASS Trigger: AGATGAAGCAAGACAAGGTGAGCCACCGTCCCACCATCTAGCCTCAAACCCTATGAGCTCCAATGGCTGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112346.3 |
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| 3UTR-3UTR CAA 90 bp | GAGGCCCGAGGGTGGGAGGCTAGCCAGCCATTGGAGCTCATAGGGTTTGAGGCTCACCTCAAAGCCCTTTaGCTACTAAACATATGTGAA | + |
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Preference number: 3 (lower is better) Translates to: EARGWEASQPLELIGFEAHLKAL*LLNICE Trigger: TTCACATATGTTTAGTAGCAAAAGGGCTTTGAGGTG...AGCCTCAAACCCTATGAGCTCCAATGGCTGGCTAGCCTCCCACCCTCGGGCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112346.3 |
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| 3UTR CCA 72 bp | CAGCCATTGGAGCTCATAGGGTTTGAGGCTAGATGGTaGGACGGTGGCTCACCTTGTCTTGCTTCATCTTCT | + |
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Preference number: 3 (lower is better) Translates to: QPLELIGFEARW*DGGSPCLASSS Trigger: AGAAGATGAAGCAAGACAAGGTGAGCCACCGTCCCACCATCTAGCCTCAAACCCTATGAGCTCCAATGGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112346.3 |
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| 3UTR TCA 72 bp | GCCCTTTGCATGCTAGGCAAGTGCTTTACCACTGAGTaGAAACCCCCAGCCCCAGAATACTGCCATTATTAT | + |
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Preference number: 3 (lower is better) Translates to: ALCMLGKCFTTE*KPPAPEYCHYY Trigger: ATAATAATGGCAGTATTCTGGGGCTGGGGGTTTTCACTCAGTGGTAAAGCACTTGCCTAGCATGCAAAGGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112346.3 |
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| 3UTR CCA 72 bp | CAACTTTTCCAGCTTTCTTTGCATCACGACAAGGAGTaGTGCATCAACGGTAGATGTGCCACTGTGGAGATT | + |
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Preference number: 3 (lower is better) Translates to: QLFQLSLHHDKE*CINGRCATVEI Trigger: AATCTCCACAGTGGCACATCTACCGTTGATGCACCACTCCTTGTCGTGATGCAAAGAAAGCTGGAAAAGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112346.3 |
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| 3UTR TCA 72 bp | CCACTGTGGAGATTTGCTGAGTGCTTATTCGTCCTCTaGGGGAGTAGATTAGCCCTACTTGTTCTAAAGAGT | + |
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Preference number: 3 (lower is better) Translates to: PLWRFAECLFVL*GSRLALLVLKS Trigger: ACTCTTTAGAACAAGTAGGGCTAATCTACTCCCTCAGAGGACGAATAAGCACTCAGCAAATCTCCACAGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112346.3 |
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| 3UTR GCA 72 bp | GAGTTTCTATCTCCTGGCCCAGATCTTTATCTCAGATaGACAGTGCACCAATCCTGGCAGTTATTTAGAGTC | + |
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Preference number: 3 (lower is better) Translates to: EFLSPGPDLYLR*TVHQSWQLFRV Trigger: GACTCTAAATAACTGCCAGGATTGGTGCACTGTGCATCTGAGATAAAGATCTGGGCCAGGAGATAGAAACTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
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| 3UTR CCA 72 bp | CCTGTTCAAATGGTCCATATAAATTTGTGGCATCAATaGGATCCCAACTTGGCTTCCCTAGTCTTCCTTCCC | + |
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Preference number: 3 (lower is better) Translates to: PVQMVHINLWHQ*DPNLASLVFLP Trigger: GGGAAGGAAGACTAGGGAAGCCAAGTTGGGATCCCATTGATGCCACAAATTTATATGGACCATTTGAACAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
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| 3UTR CCA 72 bp | AAGAGCGAACAAACATGCTTAAGGCTATTGAGATACTaGACAAATGGCCTTGCCTCGTCAAGTTCCATGCAG | + |
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Preference number: 3 (lower is better) Translates to: KSEQTCLRLLRY*TNGLASSSSMQ Trigger: CTGCATGGAACTTGACGAGGCAAGGCCATTTGTCCAGTATCTCAATAGCCTTAAGCATGTTTGTTCGCTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112346.3 |
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| 3UTR TCA 72 bp | CTCACCTTGTCTTGCTTCATCTTCTCCCAGGTCACTTaGCACCATCATATTAAAGGATGGGAAGCCCTATAT | + |
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Preference number: 3 (lower is better) Translates to: LTLSCFIFSQVT*HHHIKGWEALY Trigger: ATATAGGGCTTCCCATCCTTTAATATGATGGTGTCAAGTGACCTGGGAGAAGATGAAGCAAGACAAGGTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112346.3 |
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| 3UTR TCA 72 bp | AAAATGCACTTAAAGGCATTTATGGAAGGAAGTAGGTaGGGGTACTACATTTGGAGTCTCCTTGGTGGCATC | + |
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Preference number: 3 (lower is better) Translates to: KMHLKAFMEGSR*GYYIWSLLGGI Trigger: GATGCCACCAAGGAGACTCCAAATGTAGTACCCTCACCTACTTCCTTCCATAAATGCCTTTAAGTGCATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
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| 3UTR TCA 72 bp | TTAAACATCTTGGGATGCCAAGGCAACACACTGAAGTaGAAAATTCTTCACCAAAATGAGAGAGTGTGGGGG | + |
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Preference number: 3 (lower is better) Translates to: LNILGCQGNTLK*KILHQNERVWG Trigger: CCCCCACACTCTCTCATTTTGGTGAAGAATTTTTCACTTCAGTGTGTTGCCTTGGCATCCCAAGATGTTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
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| 3UTR GCA 72 bp | TATCTCCTGGCCCAGATCTTTATCTCAGATGCACAGTaGACCAATCCTGGCAGTTATTTAGAGTCACTTTTT | + |
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Preference number: 3 (lower is better) Translates to: YLLAQIFISDAQ*TNPGSYLESLF Trigger: AAAAAGTGACTCTAAATAACTGCCAGGATTGGTGCACTGTGCATCTGAGATAAAGATCTGGGCCAGGAGATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
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| 3UTR GCA 72 bp | ATGCTTAAGGCTATTGAGATACTGGACAAATGGCCTTaGCTCGTCAAGTTCCATGCAGAGGAAAATGTTACA | + |
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Preference number: 3 (lower is better) Translates to: MLKAIEILDKWP*LVKFHAEENVT Trigger: TGTAACATTTTCCTCTGCATGGAACTTGACGAGGCAAGGCCATTTGTCCAGTATCTCAATAGCCTTAAGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112346.3 |
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| 3UTR GCA 72 bp | CTTCCTCTTGACAGATGGGCCTGTACAATTGCATCGTaGTTTCAACCAACATTTTACATTTCAAGACGAAGG | + |
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Preference number: 3 (lower is better) Translates to: LPLDRWACTIAS*FQPTFYISRRR Trigger: CCTTCGTCTTGAAATGTAAAATGTTGGTTGAAAGCACGATGCAATTGTACAGGCCCATCTGTCAAGAGGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112346.3 |
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| 3UTR CCA 72 bp | GAACTAGGAACAGAAAGCAAAACATTTACAAACCCCTaGCCAGTTCATGTTCCCTTGGTGACACCTGTAAAT | + |
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Preference number: 3 (lower is better) Translates to: ELGTESKTFTNP*PVHVPLVTPVN Trigger: ATTTACAGGTGTCACCAAGGGAACATGAACTGGCCAGGGGTTTGTAAATGTTTTGCTTTCTGTTCCTAGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
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| 3UTR CCA 72 bp | AATGAGATGCCTGTTCAAATGGTCCATATAAATTTGTaGCATCAATGGGATCCCAACTTGGCTTCCCTAGTC | + |
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Preference number: 3 (lower is better) Translates to: NEMPVQMVHINL*HQWDPNLASLV Trigger: GACTAGGGAAGCCAAGTTGGGATCCCATTGATGCCACAAATTTATATGGACCATTTGAACAGGCATCTCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
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| 3UTR CCA 72 bp | ACAAACATGCTTAAGGCTATTGAGATACTGGACAAATaGCCTTGCCTCGTCAAGTTCCATGCAGAGGAAAAT | + |
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Preference number: 3 (lower is better) Translates to: TNMLKAIEILDK*PCLVKFHAEEN Trigger: ATTTTCCTCTGCATGGAACTTGACGAGGCAAGGCCATTTGTCCAGTATCTCAATAGCCTTAAGCATGTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112346.3 |
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| 3UTR GCA 72 bp | AAAATAGCTCAAATGAGCAACTTTTCCAGCTTTCTTTaGATCACGACAAGGAGTGGTGCATCAACGGTAGAT | + |
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Preference number: 3 (lower is better) Translates to: KIAQMSNFSSFL*ITTRSGASTVD Trigger: ATCTACCGTTGATGCACCACTCCTTGTCGTGATGCAAAGAAAGCTGGAAAAGTTGCTCATTTGAGCTATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112346.3 |
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| 3UTR-3UTR CAA 90 bp | TGGACACCTAGATTTGCATTTTATCAATTGTTATGCATTATTTCTGGGCCTCCTCCATCTTTTTCGTCATaGATGCCCTACTCTAGGGAT | + |
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Preference number: 3 (lower is better) Translates to: WTPRFAFYQLLCIISGPPPSFSS*MPYSRD Trigger: ATCCCTAGAGTAGGGCATCAATGACGAAAAAGATGG...AGGAGGCCCAGAAATAATGCATAACAATTGATAAAATGCAAATCTAGGTGTCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
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| 3UTR-3UTR CAA 90 bp | CTGGTAGCAGGGGCACATCTTTTAATAAGGTTGGTACTCCTTAAAGATGTTCTCACATTTGGAGTCTCCTaGGTGGCATCATATAATATT | + |
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Preference number: 3 (lower is better) Translates to: LVAGAHLLIRLVLLKDVLTFGVS*VASYNI Trigger: AATATTATATGATGCCACCAAGGAGACTCCAAATGT...GAGAACATCTTTAAGGAGTACCAACCTTATTAAAAGATGTGCCCCTGCTACCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
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| 3UTR TCA 72 bp | AAGAAAGAATTACTATTTACGTTTGCAGAGATGCTATaGGGGCATTACTGTGAGTTTCTATCTCCTGGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: KKELLFTFAEML*GHYCEFLSPGP Trigger: TGGGCCAGGAGATAGAAACTCACAGTAATGCCCTCATAGCATCTCTGCAAACGTAAATAGTAATTCTTTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| 3UTR TCA 72 bp | GTTACATATCAAGCAGGTTCTAGCCGTACATACAATTaGGGTGACAAGAAAAGCGCCTTTAAAATATGTACA | + |
|
Preference number: 3 (lower is better) Translates to: VTYQAGSSRTYN*GDKKSAFKICT Trigger: TGTACATATTTTAAAGGCGCTTTTCTTGTCACCTCAATTGTATGTACGGCTAGAACCTGCTTGATATGTAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112346.3 |
||
| 3UTR TCA 72 bp | TCTATGCCGAAATGTTTTCTATACATACAGGATAACTaGTCCTCAAGTGTACATTCCCATCTTTTTCGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: SMPKCFLYIQDN*SSSVHSHLFRH Trigger: ATGACGAAAAAGATGGGAATGTACACTTGAGGATCAGTTATCCTGTATGTATAGAAAACATTTCGGCATAGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| 3UTR GCA 72 bp | TTTCAAAGAAAGAATTACTATTTACGTTTGCAGAGATaGTATGAGGGCATTACTGTGAGTTTCTATCTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: FQRKNYYLRLQR*YEGITVSFYLL Trigger: CAGGAGATAGAAACTCACAGTAATGCCCTCATAGCATCTCTGCAAACGTAAATAGTAATTCTTTCTTTGAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| 3UTR TCA 72 bp | CATTTTACAAGTGAGCATACAGATGCACATCAAAAATaGGATGCCTGTTCAAATGGTCCATATAAATTTGTG | + |
|
Preference number: 3 (lower is better) Translates to: HFTSEHTDAHQK*DACSNGPYKFV Trigger: CACAAATTTATATGGACCATTTGAACAGGCATCTCATTTTTGATGTGCATCTGTATGCTCACTTGTAAAATG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| 3UTR CAA 72 bp | CAAGGCCAGGGCAGGAGACAGAGACTGCATTCAGCTTaGCTGCTGCGAGGCCAAAGAGGCCCGAGGGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QGQGRRQRLHSA*LLRGQRGPRVG Trigger: TCCCACCCTCGGGCCTCTTTGGCCTCGCAGCAGCAAAGCTGAATGCAGTCTCTGTCTCCTGCCCTGGCCTTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112346.3 |
||
| CDS-3UTR CCA 90 bp | GAGGCCCGAGGGTGGGAGGCTAGCCAGCCATTGGAGCTCATAGGGTTTGAGGCTAGTACCAGAGAGCGCTaGCCCAGCACACAACGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: EARGWEASQPLELIGFEASTRER*PSTQRS Trigger: TGACCGTTGTGTGCTGGGCCAGCGCTCTCTGGTACT...AGCCTCAAACCCTATGAGCTCCAATGGCTGGCTAGCCTCCCACCCTCGGGCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112346.3 |
||
| 3UTR CAA 72 bp | GCCAAAGAGGCCCGAGGGTGGGAGGCTAGCCAGCCATaGGAGCTCATAGGGTTTGAGGCTAGATGGTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: AKEARGWEASQP*ELIGFEARWWD Trigger: GTCCCACCATCTAGCCTCAAACCCTATGAGCTCCAATGGCTGGCTAGCCTCCCACCCTCGGGCCTCTTTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112346.3 |
||
| CDS-3UTR CCA 90 bp | TTACGTTTGCAGAGATGCTATGAGGGCATTACTGTGAGTTTCTATCTCCTGGCCAGTACCAGAGAGCGCTaGCCCAGCACACAACGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LRLQRCYEGITVSFYLLASTRER*PSTQRS Trigger: TGACCGTTGTGTGCTGGGCCAGCGCTCTCTGGTACT...GGCCAGGAGATAGAAACTCACAGTAATGCCCTCATAGCATCTCTGCAAACGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS-3UTR TCA 90 bp | GTCTTAGGACCTGAGAATGAAATCCGGCCCTCTAACTCTCTCACCATTTCTATGCTGGCAACTGTTAGGTaGCTGAACGGCTTGGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VLGPENEIRPSNSLTISMLATVR*LNGLEP Trigger: TGGCTCCAAGCCGTTCAGTCACCTAACAGTTGCCAG...CATAGAAATGGTGAGAGAGTTAGAGGGCCGGATTTCATTCTCAGGTCCTAAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS-3UTR TCA 90 bp | TTACGTTTGCAGAGATGCTATGAGGGCATTACTGTGAGTTTCTATCTCCTGGCCCAACTGTTAGGTGACTaGACGGCTTGGAGCCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LRLQRCYEGITVSFYLLAQLLGD*TAWSQC Trigger: ACACTGGCTCCAAGCCGTTCAGTCACCTAACAGTTG...GGCCAGGAGATAGAAACTCACAGTAATGCCCTCATAGCATCTCTGCAAACGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS-3UTR GCA 90 bp | CATTATTTCTGGGCCTCCTACCAACGTGTTTTCTACACATGGAGACATATGCCTCCATGTCTCCCGGATTaGCTGGCGGGCATCAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: HYFWASYQRVFYTWRHMPPCLPD*LAGIKF Trigger: GAATTTGATGCCCGCCAGGCAATCCGGGAGACATGG...AGGCATATGTCTCCATGTGTAGAAAACACGTTGGTAGGAGGCCCAGAAATAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS-3UTR CCA 90 bp | CATTATTTCTGGGCCTCCTACCAACGTGTTTTCTACACATGGAGACATATGCCTGTCTCCCGGATTGCCTaGCGGGCATCAAATTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: HYFWASYQRVFYTWRHMPVSRIA*RASNSL Trigger: CAAGGAATTTGATGCCCGCCAGGCAATCCGGGAGAC...AGGCATATGTCTCCATGTGTAGAAAACACGTTGGTAGGAGGCCCAGAAATAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS-3UTR CCA 90 bp | CTGGTAGCAGGGGCACATCTTTTAATAAGGTTGGTACTCCTTAAAGATGTTCTCTCTGGAGAGATCTGGTaGACAGTGATGACGCGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LVAGAHLLIRLVLLKDVLSGEIW*TVMTRR Trigger: CCGCCGCGTCATCACTGTCCACCAGATCTCTCCAGA...GAGAACATCTTTAAGGAGTACCAACCTTATTAAAAGATGTGCCCCTGCTACCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS-3UTR TCA 90 bp | GTCTTAGGACCTGAGAATGAAATCCGGCCCTCTAACTCTCTCACCATTTCTATGGGAGCCAGTGTAGGATaGAGTAGGTCTGGTTATGCT | + |
|
Preference number: 4 (lower is better) Translates to: VLGPENEIRPSNSLTISMGASVG*SRSGYA Trigger: AGCATAACCAGACCTACTTCATCCTACACTGGCTCC...CATAGAAATGGTGAGAGAGTTAGAGGGCCGGATTTCATTCTCAGGTCCTAAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS-3UTR TCA 90 bp | CATTATTTCTGGGCCTCCTACCAACGTGTTTTCTACACATGGAGACATATGCCTGCGAGGTCTTGTAAATaGGTTCAGCCACATCAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: HYFWASYQRVFYTWRHMPARSCK*VQPHQR Trigger: CCGCTGATGTGGCTGAACTCATTTACAAGACCTCGC...AGGCATATGTCTCCATGTGTAGAAAACACGTTGGTAGGAGGCCCAGAAATAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS-3UTR TCA 90 bp | GTCTTAGGACCTGAGAATGAAATCCGGCCCTCTAACTCTCTCACCATTTCTATGTACACATCTTCAAGATaGAGCAGCCTGGTGTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VLGPENEIRPSNSLTISMYTSSR*SSLVWS Trigger: GCTCCACACCAGGCTGCTTCATCTTGAAGATGTGTA...CATAGAAATGGTGAGAGAGTTAGAGGGCCGGATTTCATTCTCAGGTCCTAAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS-3UTR CCA 90 bp | CTGGTAGCAGGGGCACATCTTTTAATAAGGTTGGTACTCCTTAAAGATGTTCTCGTCTCCCGGATTGCCTaGCGGGCATCAAATTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LVAGAHLLIRLVLLKDVLVSRIA*RASNSL Trigger: CAAGGAATTTGATGCCCGCCAGGCAATCCGGGAGAC...GAGAACATCTTTAAGGAGTACCAACCTTATTAAAAGATGTGCCCCTGCTACCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS-3UTR CCA 90 bp | CATTACTGTGAGTTTCTATCTCCTGGCCCAGATCTTTATCTCAGATGCACAGTGTCTTCTGGAGAGATCTaGTGGACAGTGATGACGCGG | + |
|
Preference number: 4 (lower is better) Translates to: HYCEFLSPGPDLYLRCTVSSGEI*WTVMTR Trigger: CCGCGTCATCACTGTCCACCAGATCTCTCCAGAAGA...CACTGTGCATCTGAGATAAAGATCTGGGCCAGGAGATAGAAACTCACAGTAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS-3UTR CCA 90 bp | TTACGTTTGCAGAGATGCTATGAGGGCATTACTGTGAGTTTCTATCTCCTGGCCTCCACGATGATGTCATaGAAGATCTGGCTCTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LRLQRCYEGITVSFYLLASTMMS*KIWLSC Trigger: GCAAGAGAGCCAGATCTTCCATGACATCATCGTGGA...GGCCAGGAGATAGAAACTCACAGTAATGCCCTCATAGCATCTCTGCAAACGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS-3UTR CCA 90 bp | CTGGTAGCAGGGGCACATCTTTTAATAAGGTTGGTACTCCTTAAAGATGTTCTCTCTTCTGGAGAGATCTaGTGGACAGTGATGACGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LVAGAHLLIRLVLLKDVLSSGEI*WTVMTR Trigger: CCGCGTCATCACTGTCCACCAGATCTCTCCAGAAGA...GAGAACATCTTTAAGGAGTACCAACCTTATTAAAAGATGTGCCCCTGCTACCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS-3UTR TCA 90 bp | GTAGGTGAGGGTACTACATTTGGAGTCTCCTTGGTGGCATCATATAATATTTGTGCGAGGTCTTGTAAATaGGTTCAGCCACATCAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: VGEGTTFGVSLVASYNICARSCK*VQPHQR Trigger: CCGCTGATGTGGCTGAACTCATTTACAAGACCTCGC...ACAAATATTATATGATGCCACCAAGGAGACTCCAAATGTAGTACCCTCACCTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS-3UTR CCA 90 bp | CATTATTTCTGGGCCTCCTACCAACGTGTTTTCTACACATGGAGACATATGCCTATGTCATGGAAGATCTaGCTCTCTTGCTCCACCATC | + |
|
Preference number: 4 (lower is better) Translates to: HYFWASYQRVFYTWRHMPMSWKI*LSCSTI Trigger: GATGGTGGAGCAAGAGAGCCAGATCTTCCATGACAT...AGGCATATGTCTCCATGTGTAGAAAACACGTTGGTAGGAGGCCCAGAAATAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS-3UTR CCA 90 bp | AAGAGAGCATTTCTTCTACTGGTAGCAGGGGCACATCTTTTAATAAGGTTGGTACAAGATGAAGCAGCCTaGTGTGGAGCGAGGTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KRAFLLLVAGAHLLIRLVQDEAA*CGARSC Trigger: ACAAGACCTCGCTCCACACCAGGCTGCTTCATCTTG...TACCAACCTTATTAAAAGATGTGCCCCTGCTACCAGTAGAAGAAATGCTCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS-3UTR CCA 90 bp | GTAGGTGAGGGTACTACATTTGGAGTCTCCTTGGTGGCATCATATAATATTTGTCAAGATGAAGCAGCCTaGTGTGGAGCGAGGTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VGEGTTFGVSLVASYNICQDEAA*CGARSC Trigger: ACAAGACCTCGCTCCACACCAGGCTGCTTCATCTTG...ACAAATATTATATGATGCCACCAAGGAGACTCCAAATGTAGTACCCTCACCTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS-3UTR CCA 90 bp | TGGACACCTAGATTTGCATTTTATCAATTGTTATGCATTATTTCTGGGCCTCCTTCTGGAGAGATCTGGTaGACAGTGATGACGCGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: WTPRFAFYQLLCIISGPPSGEIW*TVMTRR Trigger: CCGCCGCGTCATCACTGTCCACCAGATCTCTCCAGA...AGGAGGCCCAGAAATAATGCATAACAATTGATAAAATGCAAATCTAGGTGTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS-3UTR TCA 90 bp | CAGATGGGCCTGTACAATTGCATCGTGCTTTCAACCAACATTTTACATTTCAAGGGAGCCAGTGTAGGATaGAGTAGGTCTGGTTATGCT | + |
|
Preference number: 4 (lower is better) Translates to: QMGLYNCIVLSTNILHFKGASVG*SRSGYA Trigger: AGCATAACCAGACCTACTTCATCCTACACTGGCTCC...CTTGAAATGTAAAATGTTGGTTGAAAGCACGATGCAATTGTACAGGCCCATCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112346.3 |
||
| CDS-3UTR GCA 90 bp | AGATTTGCATTTTATCAATTGTTATGCATTATTTCTGGGCCTCCTACCAACGTGCCATGTCTCCCGGATTaGCTGGCGGGCATCAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: RFAFYQLLCIISGPPTNVPCLPD*LAGIKF Trigger: GAATTTGATGCCCGCCAGGCAATCCGGGAGACATGG...CACGTTGGTAGGAGGCCCAGAAATAATGCATAACAATTGATAAAATGCAAATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS-3UTR GCA 90 bp | CTGGTAGCAGGGGCACATCTTTTAATAAGGTTGGTACTCCTTAAAGATGTTCTCAAGATCTGGCTCTCTTaGTCCACCATCTGGTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LVAGAHLLIRLVLLKDVLKIWLS*STIWFR Trigger: TCTGAACCAGATGGTGGAGCAAGAGAGCCAGATCTT...GAGAACATCTTTAAGGAGTACCAACCTTATTAAAAGATGTGCCCCTGCTACCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS-3UTR GCA 90 bp | GAGATGCCTGTTCAAATGGTCCATATAAATTTGTGGCATCAATGGGATCCCAACAGAACGGTGGGTAGTTaGTGTCAGGGTACAAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: EMPVQMVHINLWHQWDPNRTVGS*CQGTNL Trigger: GAGATTTGTACCCTGACAGCAACTACCCACCGTTCT...GTTGGGATCCCATTGATGCCACAAATTTATATGGACCATTTGAACAGGCATCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS-3UTR CCA 90 bp | CTGGTAGCAGGGGCACATCTTTTAATAAGGTTGGTACTCCTTAAAGATGTTCTCTCCACGATGATGTCATaGAAGATCTGGCTCTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LVAGAHLLIRLVLLKDVLSTMMS*KIWLSC Trigger: GCAAGAGAGCCAGATCTTCCATGACATCATCGTGGA...GAGAACATCTTTAAGGAGTACCAACCTTATTAAAAGATGTGCCCCTGCTACCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS-3UTR CCA 90 bp | GTCTTAGGACCTGAGAATGAAATCCGGCCCTCTAACTCTCTCACCATTTCTATGCTATTCTGGAAAGGATaGATGCCAAGCTTTCGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VLGPENEIRPSNSLTISMLFWKG*MPSFRR Trigger: TCTTCGAAAGCTTGGCATCCATCCTTTCCAGAATAG...CATAGAAATGGTGAGAGAGTTAGAGGGCCGGATTTCATTCTCAGGTCCTAAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS-3UTR TCA 90 bp | TGGACACCTAGATTTGCATTTTATCAATTGTTATGCATTATTTCTGGGCCTCCTCAACTGTTAGGTGACTaGACGGCTTGGAGCCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: WTPRFAFYQLLCIISGPPQLLGD*TAWSQC Trigger: ACACTGGCTCCAAGCCGTTCAGTCACCTAACAGTTG...AGGAGGCCCAGAAATAATGCATAACAATTGATAAAATGCAAATCTAGGTGTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS-3UTR TCA 90 bp | GTAGGTGAGGGTACTACATTTGGAGTCTCCTTGGTGGCATCATATAATATTTGTGACGTACTTGGCTTTTaGACAGAAAGTGGCAACCCA | + |
|
Preference number: 4 (lower is better) Translates to: VGEGTTFGVSLVASYNICDVLGF*TESGNP Trigger: TGGGTTGCCACTTTCTGTTCAAAAGCCAAGTACGTC...ACAAATATTATATGATGCCACCAAGGAGACTCCAAATGTAGTACCCTCACCTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS-3UTR TCA 90 bp | CATTACTGTGAGTTTCTATCTCCTGGCCCAGATCTTTATCTCAGATGCACAGTGCAGATGCTTCTTGCTTaGCATGTCATTCCAGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: HYCEFLSPGPDLYLRCTVQMLLA*HVIPDS Trigger: AGAATCTGGAATGACATGTCAAGCAAGAAGCATCTG...CACTGTGCATCTGAGATAAAGATCTGGGCCAGGAGATAGAAACTCACAGTAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS-3UTR GCA 90 bp | AAGAGAGCATTTCTTCTACTGGTAGCAGGGGCACATCTTTTAATAAGGTTGGTAAGAACGGTGGGTAGTTaGTGTCAGGGTACAAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: KRAFLLLVAGAHLLIRLVRTVGS*CQGTNL Trigger: GAGATTTGTACCCTGACAGCAACTACCCACCGTTCT...TACCAACCTTATTAAAAGATGTGCCCCTGCTACCAGTAGAAGAAATGCTCTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS-3UTR GCA 90 bp | GAGATGCCTGTTCAAATGGTCCATATAAATTTGTGGCATCAATGGGATCCCAACTCTGGAAAGGATGGATaGCAAGCTTTCGAAGACACA | + |
|
Preference number: 4 (lower is better) Translates to: EMPVQMVHINLWHQWDPNSGKDG*QAFEDT Trigger: TGTGTCTTCGAAAGCTTGGCATCCATCCTTTCCAGA...GTTGGGATCCCATTGATGCCACAAATTTATATGGACCATTTGAACAGGCATCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS-3UTR GCA 90 bp | TTACGTTTGCAGAGATGCTATGAGGGCATTACTGTGAGTTTCTATCTCCTGGCCTCATTCCAGATTCTGTaGATTTCTTCTGGAGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: LRLQRCYEGITVSFYLLASFQIL*ISSGEI Trigger: GATCTCTCCAGAAGAAATGCACAGAATCTGGAATGA...GGCCAGGAGATAGAAACTCACAGTAATGCCCTCATAGCATCTCTGCAAACGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS-3UTR CCA 90 bp | GTAGGTGAGGGTACTACATTTGGAGTCTCCTTGGTGGCATCATATAATATTTGTATGTCATGGAAGATCTaGCTCTCTTGCTCCACCATC | + |
|
Preference number: 4 (lower is better) Translates to: VGEGTTFGVSLVASYNICMSWKI*LSCSTI Trigger: GATGGTGGAGCAAGAGAGCCAGATCTTCCATGACAT...ACAAATATTATATGATGCCACCAAGGAGACTCCAAATGTAGTACCCTCACCTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS-3UTR CCA 90 bp | CTGGTAGCAGGGGCACATCTTTTAATAAGGTTGGTACTCCTTAAAGATGTTCTCCTTTTGAACAGAAAGTaGCAACCCATCTCATCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LVAGAHLLIRLVLLKDVLLLNRK*QPISSP Trigger: TGGGGATGAGATGGGTTGCCACTTTCTGTTCAAAAG...GAGAACATCTTTAAGGAGTACCAACCTTATTAAAAGATGTGCCCCTGCTACCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS-3UTR CCA 90 bp | GAGATGCCTGTTCAAATGGTCCATATAAATTTGTGGCATCAATGGGATCCCAACTTGAAGCCACTATTCTaGAAAGGATGGATGCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: EMPVQMVHINLWHQWDPNLKPLF*KGWMPS Trigger: GCTTGGCATCCATCCTTTCCAGAATAGTGGCTTCAA...GTTGGGATCCCATTGATGCCACAAATTTATATGGACCATTTGAACAGGCATCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| 3UTR CAA 72 bp | TACGGGGCAAATGTTTCCTACGATTTAAGTTGTGTTTaGCAAGACCTATGCAAAGCTCCTCCCCAAAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: YGANVSYDLSCV*QDLCKAPPQSK Trigger: TTTGCTTTGGGGAGGAGCTTTGCATAGGTCTTGCAAAACACAACTTAAATCGTAGGAAACATTTGCCCCGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112346.3 |
||
| 3UTR CAA 72 bp | GAAAATAGCTCAAATGAGCAACTTTTCCAGCTTTCTTaGCATCACGACAAGGAGTGGTGCATCAACGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: ENSSNEQLFQLS*HHDKEWCINGR Trigger: TCTACCGTTGATGCACCACTCCTTGTCGTGATGCAAAGAAAGCTGGAAAAGTTGCTCATTTGAGCTATTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112346.3 |
||
| 3UTR CAA 72 bp | AAAAACCCAAAGAGCGAACAAACATGCTTAAGGCTATaGAGATACTGGACAAATGGCCTTGCCTCGTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: KNPKSEQTCLRL*RYWTNGLASSS Trigger: ACTTGACGAGGCAAGGCCATTTGTCCAGTATCTCAATAGCCTTAAGCATGTTTGTTCGCTCTTTGGGTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112346.3 |
||
| CDS-3UTR TCA 90 bp | CTGGTAGCAGGGGCACATCTTTTAATAAGGTTGGTACTCCTTAAAGATGTTCTCCCATTTTCCAGTGATTaGAGCCACTATTCTGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LVAGAHLLIRLVLLKDVLPFSSD*SHYSGK Trigger: CTTTCCAGAATAGTGGCTTCAATCACTGGAAAATGG...GAGAACATCTTTAAGGAGTACCAACCTTATTAAAAGATGTGCCCCTGCTACCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS-3UTR GCA 90 bp | CATTATTTCTGGGCCTCCTACCAACGTGTTTTCTACACATGGAGACATATGCCTTCATTCCAGATTCTGTaGATTTCTTCTGGAGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: HYFWASYQRVFYTWRHMPSFQIL*ISSGEI Trigger: GATCTCTCCAGAAGAAATGCACAGAATCTGGAATGA...AGGCATATGTCTCCATGTGTAGAAAACACGTTGGTAGGAGGCCCAGAAATAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS-3UTR CCA 90 bp | GGTGAGGGTACTACATTTGGAGTCTCCTTGGTGGCATCATATAATATTTGTTCTCTTTTGAACAGAAAGTaGCAACCCATCTCATCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GEGTTFGVSLVASYNICSLLNRK*QPISSP Trigger: TGGGGATGAGATGGGTTGCCACTTTCTGTTCAAAAG...AGAACAAATATTATATGATGCCACCAAGGAGACTCCAAATGTAGTACCCTCACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS-3UTR TCA 90 bp | AAGAGAGCATTTCTTCTACTGGTAGCAGGGGCACATCTTTTAATAAGGTTGGTATTATGTTGCCAAAGGTaGAGTTTTTCCTGGCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: KRAFLLLVAGAHLLIRLVLCCQR*SFSWQL Trigger: CAGTTGCCAGGAAAAACTTCACCTTTGGCAACATAA...TACCAACCTTATTAAAAGATGTGCCCCTGCTACCAGTAGAAGAAATGCTCTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS-3UTR TCA 90 bp | AGCATACAGATGCACATCAAAAATGAGATGCCTGTTCAAATGGTCCATATAAATTACACATCTTCAAGATaGAGCAGCCTGGTGTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SIQMHIKNEMPVQMVHINYTSSR*SSLVWS Trigger: GCTCCACACCAGGCTGCTTCATCTTGAAGATGTGTA...ATTTATATGGACCATTTGAACAGGCATCTCATTTTTGATGTGCATCTGTATGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS-3UTR GCA 90 bp | TGGACACCTAGATTTGCATTTTATCAATTGTTATGCATTATTTCTGGGCCTCCTCAGGATCAGCATTTTTaGCCAGGAGGAAAAGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: WTPRFAFYQLLCIISGPPQDQHF*PGGKVW Trigger: CCACACTTTTCCTCCTGGGCAAAAATGCTGATCCTG...AGGAGGCCCAGAAATAATGCATAACAATTGATAAAATGCAAATCTAGGTGTCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS-3UTR GCA 90 bp | AGATTTGCATTTTATCAATTGTTATGCATTATTTCTGGGCCTCCTACCAACGTGCAGGATCAGCATTTTTaGCCAGGAGGAAAAGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RFAFYQLLCIISGPPTNVQDQHF*PGGKVW Trigger: CCACACTTTTCCTCCTGGGCAAAAATGCTGATCCTG...CACGTTGGTAGGAGGCCCAGAAATAATGCATAACAATTGATAAAATGCAAATCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS-3UTR TCA 90 bp | AGATTTGCATTTTATCAATTGTTATGCATTATTTCTGGGCCTCCTACCAACGTGCACTGTCGGTTTTCATaGCGTACTTGGCTTTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RFAFYQLLCIISGPPTNVHCRFS*RTWLLN Trigger: GTTCAAAAGCCAAGTACGTCATGAAAACCGACAGTG...CACGTTGGTAGGAGGCCCAGAAATAATGCATAACAATTGATAAAATGCAAATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS-3UTR CCA 90 bp | ACATTCCCATCTTTTTCGTCATTGATGCCCTACTCTAGGGATAAAATCAATTATTCTTGCTCCACCATCTaGTTCAGAACAGGATCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TFPSFSSLMPYSRDKINYSCSTI*FRTGSA Trigger: TGCTGATCCTGTTCTGAACCAGATGGTGGAGCAAGA...ATAATTGATTTTATCCCTAGAGTAGGGCATCAATGACGAAAAAGATGGGAATGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| 3UTR CAA 72 bp | AAGGAAGTAGGTGAGGGTACTACATTTGGAGTCTCCTaGGTGGCATCATATAATATTTGTTCTGGGGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: KEVGEGTTFGVS*VASYNICSGEK Trigger: TTTTTCCCCAGAACAAATATTATATGATGCCACCAAGGAGACTCCAAATGTAGTACCCTCACCTACTTCCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| 3UTR CAA 72 bp | AAAAATGAGATGCCTGTTCAAATGGTCCATATAAATTaGTGGCATCAATGGGATCCCAACTTGGCTTCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: KNEMPVQMVHIN*WHQWDPNLASL Trigger: TAGGGAAGCCAAGTTGGGATCCCATTGATGCCACAAATTTATATGGACCATTTGAACAGGCATCTCATTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| 3UTR CAA 72 bp | ACCATGATCTTCCTCTTGACAGATGGGCCTGTACAATaGCATCGTGCTTTCAACCAACATTTTACATTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: TMIFLLTDGPVQ*HRAFNQHFTFQ Trigger: TTGAAATGTAAAATGTTGGTTGAAAGCACGATGCAATTGTACAGGCCCATCTGTCAAGAGGAAGATCATGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112346.3 |
||
| CDS-3UTR TCA 90 bp | TGGACACCTAGATTTGCATTTTATCAATTGTTATGCATTATTTCTGGGCCTCCTTTATGTTGCCAAAGGTaGAGTTTTTCCTGGCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: WTPRFAFYQLLCIISGPPLCCQR*SFSWQL Trigger: CAGTTGCCAGGAAAAACTTCACCTTTGGCAACATAA...AGGAGGCCCAGAAATAATGCATAACAATTGATAAAATGCAAATCTAGGTGTCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS-3UTR TCA 90 bp | AGCATACAGATGCACATCAAAAATGAGATGCCTGTTCAAATGGTCCATATAAATCACTGTCGGTTTTCATaGCGTACTTGGCTTTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SIQMHIKNEMPVQMVHINHCRFS*RTWLLN Trigger: GTTCAAAAGCCAAGTACGTCATGAAAACCGACAGTG...ATTTATATGGACCATTTGAACAGGCATCTCATTTTTGATGTGCATCTGTATGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS-3UTR TCA 90 bp | TGGACACCTAGATTTGCATTTTATCAATTGTTATGCATTATTTCTGGGCCTCCTCCATTTTCCAGTGATTaGAGCCACTATTCTGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: WTPRFAFYQLLCIISGPPPFSSD*SHYSGK Trigger: CTTTCCAGAATAGTGGCTTCAATCACTGGAAAATGG...AGGAGGCCCAGAAATAATGCATAACAATTGATAAAATGCAAATCTAGGTGTCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS-3UTR TCA 90 bp | AGATTTGCATTTTATCAATTGTTATGCATTATTTCTGGGCCTCCTACCAACGTGCAGATGCTTCTTGCTTaGCATGTCATTCCAGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: RFAFYQLLCIISGPPTNVQMLLA*HVIPDS Trigger: AGAATCTGGAATGACATGTCAAGCAAGAAGCATCTG...CACGTTGGTAGGAGGCCCAGAAATAATGCATAACAATTGATAAAATGCAAATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS-3UTR GCA 90 bp | ACATTCCCATCTTTTTCGTCATTGATGCCCTACTCTAGGGATAAAATCAATTATTCTGGAAAGGATGGATaGCAAGCTTTCGAAGACACA | + |
|
Preference number: 4 (lower is better) Translates to: TFPSFSSLMPYSRDKINYSGKDG*QAFEDT Trigger: TGTGTCTTCGAAAGCTTGGCATCCATCCTTTCCAGA...ATAATTGATTTTATCCCTAGAGTAGGGCATCAATGACGAAAAAGATGGGAATGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS-3UTR CCA 90 bp | TGGACACCTAGATTTGCATTTTATCAATTGTTATGCATTATTTCTGGGCCTCCTCTATTCTGGAAAGGATaGATGCCAAGCTTTCGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: WTPRFAFYQLLCIISGPPLFWKG*MPSFRR Trigger: TCTTCGAAAGCTTGGCATCCATCCTTTCCAGAATAG...AGGAGGCCCAGAAATAATGCATAACAATTGATAAAATGCAAATCTAGGTGTCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS-3UTR CCA 90 bp | ACATTCCCATCTTTTTCGTCATTGATGCCCTACTCTAGGGATAAAATCAATTATTTGAAGCCACTATTCTaGAAAGGATGGATGCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: TFPSFSSLMPYSRDKINYLKPLF*KGWMPS Trigger: GCTTGGCATCCATCCTTTCCAGAATAGTGGCTTCAA...ATAATTGATTTTATCCCTAGAGTAGGGCATCAATGACGAAAAAGATGGGAATGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| 3UTR CAA 72 bp | ACAAGAAAAGCGCCTTTAAAATATGTACATGAACTCTaGGATGTCTATTTACATGTTTGTCATACGGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: TRKAPLKYVHEL*DVYLHVCHTGI Trigger: AATGCCCGTATGACAAACATGTAAATAGACATCCAAGAGTTCATGTACATATTTTAAAGGCGCTTTTCTTGT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112346.3 |
||
| CDS TCA 90 bp | CATCTTCAAGATGAAGCAGCCTGGTGTGGAGCGAGGTCTTGTAAATaGGTTCAGCCACATCAGCGGAAAAGATATAGCCAGTCCCTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: HLQDEAAWCGARSCK*VQPHQRKRYSQSLN Trigger: GTTCAGGGACTGGCTATATCTTTTCCGCTGATGTGGCTGAACTCATTTACAAGACCTCGCTCCACACCAGGCTGCTTCATCTTGAAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS GCA 90 bp | TCAATGAAGTCCTCCACGATGATGTCATGGAAGATCTGGCTCTCTTaGTCCACCATCTGGTTCAGAACAGGATCAGCATTTTTGCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SMKSSTMMSWKIWLS*STIWFRTGSAFLPR Trigger: CCTGGGCAAAAATGCTGATCCTGTTCTGAACCAGATGGTGGAGCAAGAGAGCCAGATCTTCCATGACATCATCGTGGAGGACTTCATTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS CCA 90 bp | TCCACGATGATGTCATGGAAGATCTGGCTCTCTTGCTCCACCATCTaGTTCAGAACAGGATCAGCATTTTTGCCCAGGAGGAAAAGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: STMMSWKIWLSCSTI*FRTGSAFLPRRKSV Trigger: CACACTTTTCCTCCTGGGCAAAAATGCTGATCCTGTTCTGAACCAGATGGTGGAGCAAGAGAGCCAGATCTTCCATGACATCATCGTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS TCA 90 bp | GTAAATGAGTTCAGCCACATCAGCGGAAAAGATATAGCCAGTCCCTaGACAGAACGGTGGGTAGTTGCTGTCAGGGTACAAATCTCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: VNEFSHISGKDIASP*TERWVVAVRVQISR Trigger: CCTAGAGATTTGTACCCTGACAGCAACTACCCACCGTTCTGTTCAGGGACTGGCTATATCTTTTCCGCTGATGTGGCTGAACTCATTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS CCA 90 bp | GTACAAATCTCTAGGCATATACCACTTACTGCGGACATCCCTGATTaGCCCGCCGTTGATGACGTAACCAGTGAAATACCTTCTTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: VQISRHIPLTADIPD*PAVDDVTSEIPSSW Trigger: CCAAGAAGAAGGTATTTCACTGGTTACGTCATCAACGGCGGGCCAATCAGGGATGTCCGCAGTAAGTGGTATATGCCTAGAGATTTGTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS-3UTR CAA 90 bp | CATTACTGTGAGTTTCTATCTCCTGGCCCAGATCTTTATCTCAGATGCACAGTGGAAGATCTGGCTCTCTaGCTCCACCATCTGGTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: HYCEFLSPGPDLYLRCTVEDLAL*LHHLVQ Trigger: CTGAACCAGATGGTGGAGCAAGAGAGCCAGATCTTC...CACTGTGCATCTGAGATAAAGATCTGGGCCAGGAGATAGAAACTCACAGTAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS CCA 90 bp | GATTGGCCCGCCGTTGATGACGTAACCAGTGAAATACCTTCTTCTTaGCTTGGTAGAGGGTTTCAGGAGTTTATAAATAAGGTTGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: DWPAVDDVTSEIPSS*LGRGFQEFINKVVH Trigger: ATGGACAACCTTATTTATAAACTCCTGAAACCCTCTACCAAGCCAAGAAGAAGGTATTTCACTGGTTACGTCATCAACGGCGGGCCAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS-3UTR CAA 90 bp | TTACGTTTGCAGAGATGCTATGAGGGCATTACTGTGAGTTTCTATCTCCTGGCCGGTCGAGTTCTTATGTaGCCAAAGGTGAAGTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LRLQRCYEGITVSFYLLAGRVLM*PKVKFF Trigger: GAAAAACTTCACCTTTGGCAACATAAGAACTCGACC...GGCCAGGAGATAGAAACTCACAGTAATGCCCTCATAGCATCTCTGCAAACGTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS-3UTR CAA 90 bp | AAGAGAGCATTTCTTCTACTGGTAGCAGGGGCACATCTTTTAATAAGGTTGGTACGGGCATCAAATTCCTaGTGTGTGGTGCTAATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: KRAFLLLVAGAHLLIRLVRASNS*CVVLMR Trigger: CCTCATTAGCACCACACACAAGGAATTTGATGCCCG...TACCAACCTTATTAAAAGATGTGCCCCTGCTACCAGTAGAAGAAATGCTCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS-3UTR CAA 90 bp | TTACGTTTGCAGAGATGCTATGAGGGCATTACTGTGAGTTTCTATCTCCTGGCCTCAGATGCTTCTTGCTaGACATGTCATTCCAGATTC | + |
|
Preference number: 5 (lower is better) Translates to: LRLQRCYEGITVSFYLLASDASC*TCHSRF Trigger: GAATCTGGAATGACATGTCAAGCAAGAAGCATCTGA...GGCCAGGAGATAGAAACTCACAGTAATGCCCTCATAGCATCTCTGCAAACGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS-3UTR CAA 90 bp | AGATTTGCATTTTATCAATTGTTATGCATTATTTCTGGGCCTCCTACCAACGTGGAAGATCTGGCTCTCTaGCTCCACCATCTGGTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: RFAFYQLLCIISGPPTNVEDLAL*LHHLVQ Trigger: CTGAACCAGATGGTGGAGCAAGAGAGCCAGATCTTC...CACGTTGGTAGGAGGCCCAGAAATAATGCATAACAATTGATAAAATGCAAATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS-3UTR CAA 90 bp | GTCTTAGGACCTGAGAATGAAATCCGGCCCTCTAACTCTCTCACCATTTCTATGTTTTTCTCGCACTTGTaGGGCTCATTTATCAGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: VLGPENEIRPSNSLTISMFFSHL*GSFIRN Trigger: ATTTCTGATAAATGAGCCCAACAAGTGCGAGAAAAA...CATAGAAATGGTGAGAGAGTTAGAGGGCCGGATTTCATTCTCAGGTCCTAAGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS-3UTR CAA 90 bp | AAGAGAGCATTTCTTCTACTGGTAGCAGGGGCACATCTTTTAATAAGGTTGGTAGCTATCTTGATCCCTTaGAAGTTGTTTTCATCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: KRAFLLLVAGAHLLIRLVAILIP*KLFSSP Trigger: GGGGGATGAAAACAACTTCAAAGGGATCAAGATAGC...TACCAACCTTATTAAAAGATGTGCCCCTGCTACCAGTAGAAGAAATGCTCTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS-3UTR CAA 90 bp | CTGGTAGCAGGGGCACATCTTTTAATAAGGTTGGTACTCCTTAAAGATGTTCTCTTTTTCTCGCACTTGTaGGGCTCATTTATCAGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: LVAGAHLLIRLVLLKDVLFFSHL*GSFIRN Trigger: ATTTCTGATAAATGAGCCCAACAAGTGCGAGAAAAA...GAGAACATCTTTAAGGAGTACCAACCTTATTAAAAGATGTGCCCCTGCTACCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS-3UTR CAA 90 bp | TGGACACCTAGATTTGCATTTTATCAATTGTTATGCATTATTTCTGGGCCTCCTGGTCGAGTTCTTATGTaGCCAAAGGTGAAGTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: WTPRFAFYQLLCIISGPPGRVLM*PKVKFF Trigger: GAAAAACTTCACCTTTGGCAACATAAGAACTCGACC...AGGAGGCCCAGAAATAATGCATAACAATTGATAAAATGCAAATCTAGGTGTCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS-3UTR CAA 90 bp | ACATTCCCATCTTTTTCGTCATTGATGCCCTACTCTAGGGATAAAATCAATTATGCTATCTTGATCCCTTaGAAGTTGTTTTCATCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: TFPSFSSLMPYSRDKINYAILIP*KLFSSP Trigger: GGGGGATGAAAACAACTTCAAAGGGATCAAGATAGC...ATAATTGATTTTATCCCTAGAGTAGGGCATCAATGACGAAAAAGATGGGAATGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS-3UTR CAA 90 bp | ACATTCCCATCTTTTTCGTCATTGATGCCCTACTCTAGGGATAAAATCAATTATTCAGATGCTTCTTGCTaGACATGTCATTCCAGATTC | + |
|
Preference number: 5 (lower is better) Translates to: TFPSFSSLMPYSRDKINYSDASC*TCHSRF Trigger: GAATCTGGAATGACATGTCAAGCAAGAAGCATCTGA...ATAATTGATTTTATCCCTAGAGTAGGGCATCAATGACGAAAAAGATGGGAATGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS-3UTR CAA 90 bp | ACATTCCCATCTTTTTCGTCATTGATGCCCTACTCTAGGGATAAAATCAATTATGTTTTCATGACGTACTaGGCTTTTGAACAGAAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: TFPSFSSLMPYSRDKINYVFMTY*AFEQKV Trigger: CACTTTCTGTTCAAAAGCCAAGTACGTCATGAAAAC...ATAATTGATTTTATCCCTAGAGTAGGGCATCAATGACGAAAAAGATGGGAATGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS-3UTR CAA 90 bp | AGCATACAGATGCACATCAAAAATGAGATGCCTGTTCAAATGGTCCATATAAATGTTTTCATGACGTACTaGGCTTTTGAACAGAAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SIQMHIKNEMPVQMVHINVFMTY*AFEQKV Trigger: CACTTTCTGTTCAAAAGCCAAGTACGTCATGAAAAC...ATTTATATGGACCATTTGAACAGGCATCTCATTTTTGATGTGCATCTGTATGCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS CAA 72 bp | CATGTCTCCCGGATTGCCTGGCGGGCATCAAATTCCTaGTGTGTGGTGCTAATGAGGATCACGAGAAAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: HVSRIAWRASNS*CVVLMRITRKG Trigger: TCCTTTTCTCGTGATCCTCATTAGCACCACACACAAGGAATTTGATGCCCGCCAGGCAATCCGGGAGACATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS TCA 72 bp | TTCAGCCACATCAGCGGAAAAGATATAGCCAGTCCCTaGACAGAACGGTGGGTAGTTGCTGTCAGGGTACAA | + |
|
Preference number: 6 (lower is better) Translates to: FSHISGKDIASP*TERWVVAVRVQ Trigger: TTGTACCCTGACAGCAACTACCCACCGTTCTGTTCAGGGACTGGCTATATCTTTTCCGCTGATGTGGCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS TCA 72 bp | GATGAAGCAGCCTGGTGTGGAGCGAGGTCTTGTAAATaGGTTCAGCCACATCAGCGGAAAAGATATAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: DEAAWCGARSCK*VQPHQRKRYSQ Trigger: CTGGCTATATCTTTTCCGCTGATGTGGCTGAACTCATTTACAAGACCTCGCTCCACACCAGGCTGCTTCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS CCA 72 bp | ATGTCATGGAAGATCTGGCTCTCTTGCTCCACCATCTaGTTCAGAACAGGATCAGCATTTTTGCCCAGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: MSWKIWLSCSTI*FRTGSAFLPRR Trigger: CCTCCTGGGCAAAAATGCTGATCCTGTTCTGAACCAGATGGTGGAGCAAGAGAGCCAGATCTTCCATGACAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS CCA 72 bp | TCTAGGCATATACCACTTACTGCGGACATCCCTGATTaGCCCGCCGTTGATGACGTAACCAGTGAAATACCT | + |
|
Preference number: 6 (lower is better) Translates to: SRHIPLTADIPD*PAVDDVTSEIP Trigger: AGGTATTTCACTGGTTACGTCATCAACGGCGGGCCAATCAGGGATGTCCGCAGTAAGTGGTATATGCCTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
||
| CDS CCA 72 bp | TCATTCCAGATTCTGTGCATTTCTTCTGGAGAGATCTaGTGGACAGTGATGACGCGGCGGTACCGACACAAA | + |
|
Preference number: 6 (lower is better) Translates to: SFQILCISSGEI*WTVMTRRYRHK Trigger: TTTGTGTCGGTACCGCCGCGTCATCACTGTCCACCAGATCTCTCCAGAAGAAATGCACAGAATCTGGAATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
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| CDS CAA 90 bp | GTCAATGAAGTCCTCCACGATGATGTCATGGAAGATCTGGCTCTCTaGCTCCACCATCTGGTTCAGAACAGGATCAGCATTTTTGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: VNEVLHDDVMEDLAL*LHHLVQNRISIFAQ Trigger: CTGGGCAAAAATGCTGATCCTGTTCTGAACCAGATGGTGGAGCAAGAGAGCCAGATCTTCCATGACATCATCGTGGAGGACTTCATTGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
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| CDS CCA 72 bp | TCAATGAAGTCCTCCACGATGATGTCATGGAAGATCTaGCTCTCTTGCTCCACCATCTGGTTCAGAACAGGA | + |
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Preference number: 6 (lower is better) Translates to: SMKSSTMMSWKI*LSCSTIWFRTG Trigger: TCCTGTTCTGAACCAGATGGTGGAGCAAGAGAGCCAGATCTTCCATGACATCATCGTGGAGGACTTCATTGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
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| CDS CAA 72 bp | TGCTCCACCATCTGGTTCAGAACAGGATCAGCATTTTaGCCCAGGAGGAAAAGTGTGGCTATCTTGATCCCT | + |
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Preference number: 6 (lower is better) Translates to: CSTIWFRTGSAF*PRRKSVAILIP Trigger: AGGGATCAAGATAGCCACACTTTTCCTCCTGGGCAAAAATGCTGATCCTGTTCTGAACCAGATGGTGGAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
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| CDS CAA 90 bp | TGGCTCTCTTGCTCCACCATCTGGTTCAGAACAGGATCAGCATTTTaGCCCAGGAGGAAAAGTGTGGCTATCTTGATCCCTTTGAAGTTG | + |
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Preference number: 6 (lower is better) Translates to: WLSCSTIWFRTGSAF*PRRKSVAILIPLKL Trigger: CAACTTCAAAGGGATCAAGATAGCCACACTTTTCCTCCTGGGCAAAAATGCTGATCCTGTTCTGAACCAGATGGTGGAGCAAGAGAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
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| CDS TCA 72 bp | GGTACCGACACAAACTGTAGGCCATTTTCCAGTGATTaGAGCCACTATTCTGGAAAGGATGGATGCCAAGCT | + |
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Preference number: 6 (lower is better) Translates to: GTDTNCRPFSSD*SHYSGKDGCQA Trigger: AGCTTGGCATCCATCCTTTCCAGAATAGTGGCTTCAATCACTGGAAAATGGCCTACAGTTTGTGTCGGTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 |
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| CDS CAA 72 bp | TCAAAAGAATGTGGGTTTATAGGTCGAGTTCTTATGTaGCCAAAGGTGAAGTTTTTCCTGGCAACTGTTAGG | + |
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Preference number: 6 (lower is better) Translates to: SKECGFIGRVLM*PKVKFFLATVR Trigger: CCTAACAGTTGCCAGGAAAAACTTCACCTTTGGCAACATAAGAACTCGACCTATAAACCCACATTCTTTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000042456.4 ENSMUST00000112346.3 ENSMUST00000180887.2 |
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