Pregenerated sensors for B2M (Mus musculus)

Ensembl gene IDs: ENSMUSG00000060802

Ensembl transcript IDs: ENSMUST00000102476.5

Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR TCA 90 bp	GTAGCCACAGGGTTGGGGGTGAGAATTGCTAAGCATTGGGCACAGTaGCAGACTTCAATTAGGCCTCTTTGCTTTACCAAAAGGAAAGTA	+
Preference number: 1 (lower is better) Translates to: VATGLGVRIAKHWAQ*QTSIRPLCFTKRKV Trigger: TACTTTCCTTTTGGTAAAGCAAAGAGGCCTAATTGAAGTCTGTCACTGTGCCCAATGCTTAGCAATTCTCACCCCCAACCCTGTGGCTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102476.5
3UTR GCA 90 bp	AGGAAAGTATGTCACTTATGTTGTGATAGACCAAAGATGAGTAACTaGATCCAAGTAATGAGAAGTACAGAGGGTTTGGCATATGATCAA	+
Preference number: 1 (lower is better) Translates to: RKVCHLCCDRPKMSN*IQVMRSTEGLAYDQ Trigger: TTGATCATATGCCAAACCCTCTGTACTTCTCATTACTTGGATGCAGTTACTCATCTTTGGTCTATCACAACATAAGTGACATACTTTCCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102476.5
3UTR-3UTR GCA 90 bp	CTTCAATTAGGCCTCTTTGCTTTACCAAAAGGAAAGTATGTCACTTATGTTGTGCCAAAGATGAGTAACTaGATCCAAGTAATGAGAAGT	+
Preference number: 2 (lower is better) Translates to: LQLGLFALPKGKYVTYVVPKMSN*IQVMRS Trigger: ACTTCTCATTACTTGGATGCAGTTACTCATCTTTGG...CACAACATAAGTGACATACTTTCCTTTTGGTAAAGCAAAGAGGCCTAATTGAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102476.5
3UTR GCA 72 bp	TGTCACTTATGTTGTGATAGACCAAAGATGAGTAACTaGATCCAAGTAATGAGAAGTACAGAGGGTTTGGCA	+
Preference number: 3 (lower is better) Translates to: CHLCCDRPKMSN*IQVMRSTEGLA Trigger: TGCCAAACCCTCTGTACTTCTCATTACTTGGATGCAGTTACTCATCTTTGGTCTATCACAACATAAGTGACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102476.5
3UTR-3UTR CAA 90 bp	AGACTTCAATTAGGCCTCTTTGCTTTACCAAAAGGAAAGTATGTCACTTATGTTAAGGTGATGTGTACATaGCTATTTCTTTCTGCGTGC	+
Preference number: 3 (lower is better) Translates to: RLQLGLFALPKGKYVTYVKVMCT*LFLSAC Trigger: GCACGCAGAAAGAAATAGCAATGTACACATCACCTT...AACATAAGTGACATACTTTCCTTTTGGTAAAGCAAAGAGGCCTAATTGAAGTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102476.5
CDS-3UTR TCA 90 bp	AGACTTCAATTAGGCCTCTTTGCTTTACCAAAAGGAAAGTATGTCACTTATGTTCTCCGGTGGGTGGCGTaGGTATACTTGAATTTGAGG	+
Preference number: 4 (lower is better) Translates to: RLQLGLFALPKGKYVTYVLRWVA*VYLNLR Trigger: CCTCAAATTCAAGTATACTCACGCCACCCACCGGAG...AACATAAGTGACATACTTTCCTTTTGGTAAAGCAAAGAGGCCTAATTGAAGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102476.5
CDS-3UTR TCA 90 bp	AGTGACAGACTTCAATTAGGCCTCTTTGCTTTACCAAAAGGAAAGTATGTCACTAAGACCAGTCCTTGCTaGAGGACATATCTGACATCT	+
Preference number: 4 (lower is better) Translates to: SDRLQLGLFALPKGKYVTKTSPC*RTYLTS Trigger: AGATGTCAGATATGTCCTTCAGCAAGGACTGGTCTT...AGTGACATACTTTCCTTTTGGTAAAGCAAAGAGGCCTAATTGAAGTCTGTCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102476.5
CDS-3UTR CAA 90 bp	CTTCAATTAGGCCTCTTTGCTTTACCAAAAGGAAAGTATGTCACTTATGTTGTGCCCGTTCTTCAGCATTaGGATTTCAATGTGAGGCGG	+
Preference number: 5 (lower is better) Translates to: LQLGLFALPKGKYVTYVVPVLQH*DFNVRR Trigger: CCGCCTCACATTGAAATCCAAATGCTGAAGAACGGG...CACAACATAAGTGACATACTTTCCTTTTGGTAAAGCAAAGAGGCCTAATTGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102476.5
CDS TCA 72 bp	CAGTATGTTCGGCTTCCCATTCTCCGGTGGGTGGCGTaGGTATACTTGAATTTGAGGGGTTTTCTGGATAGC	+
Preference number: 6 (lower is better) Translates to: QYVRLPILRWVA*VYLNLRGFLDS Trigger: GCTATCCAGAAAACCCCTCAAATTCAAGTATACTCACGCCACCCACCGGAGAATGGGAAGCCGAACATACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102476.5