Pregenerated sensors for AZIN1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037458Ensembl transcript IDs: ENSMUST00000065308.13, ENSMUST00000110328.9, ENSMUST00000110329.8, ENSMUST00000129589.8, ENSMUST00000151319.8
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATGCTGGAAACAGACAGACATAGCCCTTCTTTAAGGTTAGGGTTCTaGAGTCCTCTGCAGTCTCTTACCCCCTTCCCACCAAGTTTTCAG | + |
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Preference number: 1 (lower is better) Translates to: MLETDRHSPSLRLGF*SPLQSLTPFPPSFQ Trigger: CTGAAAACTTGGTGGGAAGGGGGTAAGAGACTGCAGAGGACTGCAGAACCCTAACCTTAAAGAAGGGCTATGTCTGTCTGTTTCCAGCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 ENSMUST00000129589.8 |
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| 3UTR TCA 90 bp | GAAGATGATTGGGGCAGAGTTGGTTTACATCATCATCAGCACATGTaGAGCCTGAAGACTGTAGGAAGTATGTTGATTATGTTGCCAGTA | + |
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Preference number: 1 (lower is better) Translates to: EDDWGRVGLHHHQHM*SLKTVGSMLIMLPV Trigger: TACTGGCAACATAATCAACATACTTCCTACAGTCTTCAGGCTTCACATGTGCTGATGATGATGTAAACCAACTCTGCCCCAATCATCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129589.8 |
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| 3UTR GCA 90 bp | TGGCCTCTGAAAATCATTAAAAGCAGATGGTTCGTGGAAAGAATCTaGTCCCATGTTATCAAAGATAAGCCAATCTCCCACATTCAGCTC | + |
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Preference number: 1 (lower is better) Translates to: WPLKIIKSRWFVERI*SHVIKDKPISHIQL Trigger: GAGCTGAATGTGGGAGATTGGCTTATCTTTGATAACATGGGAGCAGATTCTTTCCACGAACCATCTGCTTTTAATGATTTTCAGAGGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129589.8 |
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| 3UTR TCA 90 bp | GACTGCAAGTGTAAACGCAGAAGATACATAGTAGCTTCCAGGTTCTaGAATTATCTGAATGCCAGATCCTTCAGGGAAGTAAATATCCAA | + |
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Preference number: 1 (lower is better) Translates to: DCKCKRRRYIVASRF*NYLNARSFREVNIQ Trigger: TTGGATATTTACTTCCCTGAAGGATCTGGCATTCAGATAATTTCAGAACCTGGAAGCTACTATGTATCTTCTGCGTTTACACTTGCAGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110328.9 ENSMUST00000129589.8 |
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| 3UTR GCA 90 bp | ACCCCAATTATTTGGACATCAAGTTCCTTGGCACATTCCAAAAGATaGCTACAATTCTTCAGTGTAGTGCCAAACTTCATGTTACCATCT | + |
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Preference number: 1 (lower is better) Translates to: TPIIWTSSSLAHSKR*LQFFSVVPNFMLPS Trigger: AGATGGTAACATGAAGTTTGGCACTACACTGAAGAATTGTAGGCATCTTTTGGAATGTGCCAAGGAACTTGATGTCCAAATAATTGGGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129589.8 |
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| 3UTR-3UTR GCA 90 bp | AATTCACCACCCCAAAGCCCTCTGGATATAAATGTCTGTGCGAAGGAAGGGGCAGGTTCTGCAGTCCTCTaGAGTCTCTTACCCCCTTCC | + |
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Preference number: 2 (lower is better) Translates to: NSPPQSPLDINVCAKEGAGSAVL*SLLPPS Trigger: GGAAGGGGGTAAGAGACTGCAGAGGACTGCAGAACC...TGCCCCTTCCTTCGCACAGACATTTATATCCAGAGGGCTTTGGGGTGGTGAATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 ENSMUST00000129589.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGGCAACAGTGTCAGGTTAGTGATGCTAAATCCTCCCCACCTCCACCAAGCTAGATGGCAACTGATATaGCACAAAGACCAAGCCAGT | + |
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Preference number: 2 (lower is better) Translates to: PGNSVRLVMLNPPHLHQARWQLI*HKDQAS Trigger: ACTGGCTTGGTCTTTGTGGCATATCAGTTGCCATCT...AGCTTGGTGGAGGTGGGGAGGATTTAGCATCACTAACCTGACACTGTTGCCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 ENSMUST00000129589.8 |
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| 3UTR-3UTR TCA 90 bp | AATTCACCACCCCAAAGCCCTCTGGATATAAATGTCTGTGCGAAGGAAGGGGCATCTTCCACTCACATGTaGTATATCTGGGTGAAAGAC | + |
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Preference number: 2 (lower is better) Translates to: NSPPQSPLDINVCAKEGASSTHM*YIWVKD Trigger: GTCTTTCACCCAGATATATCACATGTGAGTGGAAGA...TGCCCCTTCCTTCGCACAGACATTTATATCCAGAGGGCTTTGGGGTGGTGAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 ENSMUST00000129589.8 |
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| 3UTR-3UTR GCA 90 bp | CCTCTGGATATAAATGTCTGTGCGAAGGAAGGGGCATCAGGATGCTGGAAACAGCAGACAAGCTTAACCTaGGACTTCAGATCTAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: PLDINVCAKEGASGCWKQQTSLT*DFRSKE Trigger: TTCCTTAGATCTGAAGTCGCAGGTTAAGCTTGTCTG...CTGTTTCCAGCATCCTGATGCCCCTTCCTTCGCACAGACATTTATATCCAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 ENSMUST00000129589.8 |
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| 3UTR-3UTR GCA 90 bp | AATTCACCACCCCAAAGCCCTCTGGATATAAATGTCTGTGCGAAGGAAGGGGCACAGACAAGCTTAACCTaGGACTTCAGATCTAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: NSPPQSPLDINVCAKEGAQTSLT*DFRSKE Trigger: TTCCTTAGATCTGAAGTCGCAGGTTAAGCTTGTCTG...TGCCCCTTCCTTCGCACAGACATTTATATCCAGAGGGCTTTGGGGTGGTGAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 ENSMUST00000129589.8 |
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| 3UTR-3UTR GCA 90 bp | CTGGTCTTCCACTCACATGTGATATATCTGGGTGAAAGACATCAACTTTACAAGGGTTCTGCAGTCCTCTaGAGTCTCTTACCCCCTTCC | + |
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Preference number: 2 (lower is better) Translates to: LVFHSHVIYLGERHQLYKGSAVL*SLLPPS Trigger: GGAAGGGGGTAAGAGACTGCAGAGGACTGCAGAACC...CTTGTAAAGTTGATGTCTTTCACCCAGATATATCACATGTGAGTGGAAGACCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 ENSMUST00000129589.8 |
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| 3UTR-3UTR CCA 90 bp | ATTAGCAATTTTGGGCTGTGTTACATACAACCACTCTCCTATGCAGATGGCAACGGGGCATCAGGATGCTaGAAACAGACAGACATAGCC | + |
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Preference number: 2 (lower is better) Translates to: ISNFGLCYIQPLSYADGNGASGC*KQTDIA Trigger: GGCTATGTCTGTCTGTTTCCAGCATCCTGATGCCCC...GTTGCCATCTGCATAGGAGAGTGGTTGTATGTAACACAGCCCAAAATTGCTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 ENSMUST00000129589.8 |
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| 3UTR-3UTR TCA 90 bp | CATAGTAGCTTCCAGGTTCTGAAATTATCTGAATGCCAGATCCTTCAGGGAAGTGAATTTCAGTTCCTGTaGAGCCTCCACCGATGTCTA | + |
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Preference number: 2 (lower is better) Translates to: HSSFQVLKLSECQILQGSEFQFL*SLHRCL Trigger: TAGACATCGGTGGAGGCTTCACAGGAACTGAAATTC...ACTTCCCTGAAGGATCTGGCATTCAGATAATTTCAGAACCTGGAAGCTACTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110328.9 ENSMUST00000129589.8 |
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| 3UTR-3UTR TCA 90 bp | ATTAGCAATTTTGGGCTGTGTTACATACAACCACTCTCCTATGCAGATGGCAACCATCATCAGCACATGTaGAGCCTGAAGACTGTAGGA | + |
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Preference number: 2 (lower is better) Translates to: ISNFGLCYIQPLSYADGNHHQHM*SLKTVG Trigger: TCCTACAGTCTTCAGGCTTCACATGTGCTGATGATG...GTTGCCATCTGCATAGGAGAGTGGTTGTATGTAACACAGCCCAAAATTGCTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129589.8 |
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| 3UTR-3UTR TCA 90 bp | GGAAGCGTTAATGCCTGTTTAAGCTTCAGTGGAAAAGCTGTCTTCTTGGCTCAGCAGCTTTCCACAATTTaGTCAAGCTCATCACAGGAT | + |
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Preference number: 2 (lower is better) Translates to: GSVNACLSFSGKAVFLAQQLSTI*SSSSQD Trigger: ATCCTGTGATGAGCTTGATCAAATTGTGGAAAGCTG...CTGAGCCAAGAAGACAGCTTTTCCACTGAAGCTTAAACAGGCATTAACGCTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129589.8 |
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| 3UTR-3UTR GCA 90 bp | TTAGTGATGCTAAATCCTCCCCACCTCCACCAAGCTTTAGTACGAAGGAAGAATAGATGGCAACTGATATaGCACAAAGACCAAGCCAGT | + |
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Preference number: 2 (lower is better) Translates to: LVMLNPPHLHQALVRRKNRWQLI*HKDQAS Trigger: ACTGGCTTGGTCTTTGTGGCATATCAGTTGCCATCT...ATTCTTCCTTCGTACTAAAGCTTGGTGGAGGTGGGGAGGATTTAGCATCACTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 ENSMUST00000129589.8 |
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| 3UTR-3UTR GCA 90 bp | TTAGTGATGCTAAATCCTCCCCACCTCCACCAAGCTTTAGTACGAAGGAAGAATCAGACAAGCTTAACCTaGGACTTCAGATCTAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: LVMLNPPHLHQALVRRKNQTSLT*DFRSKE Trigger: TTCCTTAGATCTGAAGTCGCAGGTTAAGCTTGTCTG...ATTCTTCCTTCGTACTAAAGCTTGGTGGAGGTGGGGAGGATTTAGCATCACTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 ENSMUST00000129589.8 |
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| 3UTR-3UTR CCA 90 bp | AATTCACCACCCCAAAGCCCTCTGGATATAAATGTCTGTGCGAAGGAAGGGGCAAAAGCTGATTTTGTCTaGTCCCAAATAGCTATTACT | + |
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Preference number: 2 (lower is better) Translates to: NSPPQSPLDINVCAKEGAKADFV*SQIAIT Trigger: AGTAATAGCTATTTGGGACCAGACAAAATCAGCTTT...TGCCCCTTCCTTCGCACAGACATTTATATCCAGAGGGCTTTGGGGTGGTGAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 ENSMUST00000129589.8 |
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| 3UTR-3UTR CCA 90 bp | TTAGTGATGCTAAATCCTCCCCACCTCCACCAAGCTTTAGTACGAAGGAAGAATACTCTCCTATGCAGATaGCAACTGATATGCCACAAA | + |
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Preference number: 2 (lower is better) Translates to: LVMLNPPHLHQALVRRKNTLLCR*QLICHK Trigger: TTTGTGGCATATCAGTTGCCATCTGCATAGGAGAGT...ATTCTTCCTTCGTACTAAAGCTTGGTGGAGGTGGGGAGGATTTAGCATCACTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 ENSMUST00000129589.8 |
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| 3UTR-3UTR GCA 90 bp | AAAAGGCGGTCCCATGAATATCCATTCATTAAAAGCTTCATTGTGCTAGGCAATGAAGGGGCATCAGGATaGTGGAAACAGACAGACATA | + |
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Preference number: 2 (lower is better) Translates to: KRRSHEYPFIKSFIVLGNEGASG*WKQTDI Trigger: TATGTCTGTCTGTTTCCAGCATCCTGATGCCCCTTC...ATTGCCTAGCACAATGAAGCTTTTAATGAATGGATATTCATGGGACCGCCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065308.13 |
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| 3UTR-3UTR CCA 90 bp | CTGGTCTTCCACTCACATGTGATATATCTGGGTGAAAGACATCAACTTTACAAGGGACATCAAGTTCCTTaGCACATTCCAAAAGATGCC | + |
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Preference number: 2 (lower is better) Translates to: LVFHSHVIYLGERHQLYKGHQVP*HIPKDA Trigger: GGCATCTTTTGGAATGTGCCAAGGAACTTGATGTCC...CTTGTAAAGTTGATGTCTTTCACCCAGATATATCACATGTGAGTGGAAGACCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129589.8 |
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| 3UTR-3UTR TCA 90 bp | TTAGTGATGCTAAATCCTCCCCACCTCCACCAAGCTTTAGTACGAAGGAAGAATTTTCATCATTGCATCTaGAGTAATTCCAGCATCTTG | + |
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Preference number: 2 (lower is better) Translates to: LVMLNPPHLHQALVRRKNFHHCI*SNSSIL Trigger: CAAGATGCTGGAATTACTTCAGATGCAATGATGAAA...ATTCTTCCTTCGTACTAAAGCTTGGTGGAGGTGGGGAGGATTTAGCATCACTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129589.8 |
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| 3UTR-3UTR CCA 90 bp | TTAGTGATGCTAAATCCTCCCCACCTCCACCAAGCTTTAGTACGAAGGAAGAATAAGTTTTGGCATTTCTaGACCACAACAATGCATATG | + |
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Preference number: 2 (lower is better) Translates to: LVMLNPPHLHQALVRRKNKFWHF*TTTMHM Trigger: CATATGCATTGTTGTGGTCCAGAAATGCCAAAACTT...ATTCTTCCTTCGTACTAAAGCTTGGTGGAGGTGGGGAGGATTTAGCATCACTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 ENSMUST00000129589.8 |
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| 3UTR-3UTR TCA 90 bp | TATCTGAATGCCAGATCCTTCAGGGAAGTAAATATCCAACAGAGGACTGATAACTTAACCTCTTCCAACTaGATTTCAGTTCCTGTGAAG | + |
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Preference number: 2 (lower is better) Translates to: YLNARSFREVNIQQRTDNLTSSN*ISVPVK Trigger: CTTCACAGGAACTGAAATTCAGTTGGAAGAGGTTAA...GTTATCAGTCCTCTGTTGGATATTTACTTCCCTGAAGGATCTGGCATTCAGATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110328.9 ENSMUST00000129589.8 |
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| 3UTR-3UTR TCA 90 bp | ATTAGCAATTTTGGGCTGTGTTACATACAACCACTCTCCTATGCAGATGGCAACTTCTTTGCAAGCACTTaGAACATGAAATTTAACCCC | + |
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Preference number: 2 (lower is better) Translates to: ISNFGLCYIQPLSYADGNFFAST*NMKFNP Trigger: GGGGTTAAATTTCATGTTTCAAGTGCTTGCAAAGAA...GTTGCCATCTGCATAGGAGAGTGGTTGTATGTAACACAGCCCAAAATTGCTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129589.8 |
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| 3UTR-3UTR CCA 90 bp | TTAGTGATGCTAAATCCTCCCCACCTCCACCAAGCTTTAGTACGAAGGAAGAATAAAGCTGATTTTGTCTaGTCCCAAATAGCTATTACT | + |
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Preference number: 2 (lower is better) Translates to: LVMLNPPHLHQALVRRKNKADFV*SQIAIT Trigger: AGTAATAGCTATTTGGGACCAGACAAAATCAGCTTT...ATTCTTCCTTCGTACTAAAGCTTGGTGGAGGTGGGGAGGATTTAGCATCACTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 ENSMUST00000129589.8 |
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| 3UTR-3UTR GCA 90 bp | CAATGTACAGTAGACCAGAGCAATAAGGAAGAGTATATAGACGATGACTTCTGTATCCAGCTATTCAAGTaGATCCCACACTTCTATGTA | + |
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Preference number: 2 (lower is better) Translates to: QCTVDQSNKEEYIDDDFCIQLFK*IPHFYV Trigger: TACATAGAAGTGTGGGATGCACTTGAATAGCTGGAT...ACAGAAGTCATCGTCTATATACTCTTCCTTATTGCTCTGGTCTACTGTACATTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065308.13 |
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| 3UTR CAA 90 bp | TTAACAGGAATCCTTATAAAAACTGTGTACTTGTATGTAAACGATTaGATGGGGAACCCAGTTAATGGGCTTCCATCTCCACTAAGTCAT | + |
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Preference number: 2 (lower is better) Translates to: LTGILIKTVYLYVND*MGNPVNGLPSPLSH Trigger: ATGACTTAGTGGAGATGGAAGCCCATTAACTGGGTTCCCCATCAAATCGTTTACATACAAGTACACAGTTTTTATAAGGATTCCTGTTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 ENSMUST00000129589.8 |
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| 3UTR-3UTR GCA 90 bp | AAGAAACTAACCCTCAAAACAGACCACACACAACTAGTTCATAACTACCTTTGCTTCGTGGAAAGAATCTaGTCCCATGTTATCAAAGAT | + |
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Preference number: 2 (lower is better) Translates to: KKLTLKTDHTQLVHNYLCFVERI*SHVIKD Trigger: ATCTTTGATAACATGGGAGCAGATTCTTTCCACGAA...GCAAAGGTAGTTATGAACTAGTTGTGTGTGGTCTGTTTTGAGGGTTAGTTTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129589.8 |
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| 3UTR-3UTR GCA 90 bp | CCAGTTAATGGGCTTCCATCTCCACTAAGTCATCCATTTTGTTGCATATTTTATGTAATTCCAGCATCTTaGATCTCATACCAATCACTG | + |
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Preference number: 2 (lower is better) Translates to: PVNGLPSPLSHPFCCIFYVIPAS*ISYQSL Trigger: CAGTGATTGGTATGAGATGCAAGATGCTGGAATTAC...ATAAAATATGCAACAAAATGGATGACTTAGTGGAGATGGAAGCCCATTAACTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129589.8 |
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| 3UTR-3UTR CCA 90 bp | AAGAAACTAACCCTCAAAACAGACCACACACAACTAGTTCATAACTACCTTTGCATCATTAAAAGCAGATaGTTCGTGGAAAGAATCTGC | + |
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Preference number: 2 (lower is better) Translates to: KKLTLKTDHTQLVHNYLCIIKSR*FVERIC Trigger: GCAGATTCTTTCCACGAACCATCTGCTTTTAATGAT...GCAAAGGTAGTTATGAACTAGTTGTGTGTGGTCTGTTTTGAGGGTTAGTTTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129589.8 |
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| 3UTR CAA 90 bp | AAGGGACTAGGTTTAAACCAATATCAACAACAACAACATTCCAATTaGATACTATTACAAGTGAGAAAGTGTGCTGAATTCACCACCCCA | + |
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Preference number: 2 (lower is better) Translates to: KGLGLNQYQQQQHSN*ILLQVRKCAEFTTP Trigger: TGGGGTGGTGAATTCAGCACACTTTCTCACTTGTAATAGTATCAAATTGGAATGTTGTTGTTGTTGATATTGGTTTAAACCTAGTCCCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 ENSMUST00000129589.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGTTAATGGGCTTCCATCTCCACTAAGTCATCCATTTTGTTGCATATTTTATTGTGAACCTCTGGAATaGTATTTAAGTCCTCAGAAA | + |
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Preference number: 2 (lower is better) Translates to: PVNGLPSPLSHPFCCIFYCEPLE*YLSPQK Trigger: TTTCTGAGGACTTAAATACCATTCCAGAGGTTCACA...ATAAAATATGCAACAAAATGGATGACTTAGTGGAGATGGAAGCCCATTAACTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129589.8 |
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| 3UTR GCA 72 bp | ACAGACAGACATAGCCCTTCTTTAAGGTTAGGGTTCTaGAGTCCTCTGCAGTCTCTTACCCCCTTCCCACCA | + |
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Preference number: 3 (lower is better) Translates to: TDRHSPSLRLGF*SPLQSLTPFPP Trigger: TGGTGGGAAGGGGGTAAGAGACTGCAGAGGACTGCAGAACCCTAACCTTAAAGAAGGGCTATGTCTGTCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 ENSMUST00000129589.8 |
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| 3UTR-3UTR CAA 90 bp | CCTGGCAACAGTGTCAGGTTAGTGATGCTAAATCCTCCCCACCTCCACCAAGCTGGAAAAGCTGTCTTCTaGGCTCAGCTGAATACAAGA | + |
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Preference number: 3 (lower is better) Translates to: PGNSVRLVMLNPPHLHQAGKAVF*AQLNTR Trigger: TCTTGTATTCAGCTGAGCCAAGAAGACAGCTTTTCC...AGCTTGGTGGAGGTGGGGAGGATTTAGCATCACTAACCTGACACTGTTGCCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129589.8 |
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| 3UTR-3UTR CAA 90 bp | ACCCCAAAGCCCTCTGGATATAAATGTCTGTGCGAAGGAAGGGGCATCAGGATGATGATTGGGGCAGAGTaGGTTTACATCATCATCAGC | + |
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Preference number: 3 (lower is better) Translates to: TPKPSGYKCLCEGRGIRMMIGAE*VYIIIS Trigger: GCTGATGATGATGTAAACCAACTCTGCCCCAATCAT...CATCCTGATGCCCCTTCCTTCGCACAGACATTTATATCCAGAGGGCTTTGGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000129589.8 |
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| 3UTR GCA 72 bp | CCCCCACACTGGAATGTAGACCAGACAAGCTTAACCTaGGACTTCAGATCTAAGGAAGCGTTAATGCCTGTT | + |
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Preference number: 3 (lower is better) Translates to: PPHWNVDQTSLT*DFRSKEALMPV Trigger: AACAGGCATTAACGCTTCCTTAGATCTGAAGTCGCAGGTTAAGCTTGTCTGGTCTACATTCCAGTGTGGGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129589.8 |
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| 3UTR-3UTR CAA 90 bp | CCCTCTGGATATAAATGTCTGTGCGAAGGAAGGGGCATCAGGATGCTGGAAACAACAGCTTTCCACAATTaGATCAAGCTCATCACAGGA | + |
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Preference number: 3 (lower is better) Translates to: PSGYKCLCEGRGIRMLETTAFHN*IKLITG Trigger: TCCTGTGATGAGCTTGATCAAATTGTGGAAAGCTGT...TGTTTCCAGCATCCTGATGCCCCTTCCTTCGCACAGACATTTATATCCAGAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129589.8 |
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| 3UTR TCA 72 bp | ACATTCAGCTCAGGAAGAAGACAGCTTTCCACAATTTaGTCAAGCTCATCACAGGATGGACCCCAAAGGCTG | + |
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Preference number: 3 (lower is better) Translates to: TFSSGRRQLSTI*SSSSQDGPQRL Trigger: CAGCCTTTGGGGTCCATCCTGTGATGAGCTTGATCAAATTGTGGAAAGCTGTCTTCTTCCTGAGCTGAATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129589.8 |
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| 3UTR CCA 72 bp | TGGGCTGTGTTACATACAACCACTCTCCTATGCAGATaGCAACTGATATGCCACAAAGACCAAGCCAGTACA | + |
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Preference number: 3 (lower is better) Translates to: WAVLHTTTLLCR*QLICHKDQAST Trigger: TGTACTGGCTTGGTCTTTGTGGCATATCAGTTGCCATCTGCATAGGAGAGTGGTTGTATGTAACACAGCCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 ENSMUST00000129589.8 |
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| 3UTR TCA 72 bp | AGAGCTTTTAATTCCTGGACAGGTTCACCCTCACTATaGAAGCTGCACTGCAAACTCATGCAACATACTCCC | + |
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Preference number: 3 (lower is better) Translates to: RAFNSWTGSPSL*KLHCKLMQHTP Trigger: GGGAGTATGTTGCATGAGTTTGCAGTGCAGCTTTCATAGTGAGGGTGAACCTGTCCAGGAATTAAAAGCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065308.13 |
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| 3UTR-3UTR CAA 90 bp | AATTCACCACCCCAAAGCCCTCTGGATATAAATGTCTGTGCGAAGGAAGGGGCATTGTATGTAAACGATTaGATGGGGAACCCAGTTAAT | + |
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Preference number: 3 (lower is better) Translates to: NSPPQSPLDINVCAKEGALYVND*MGNPVN Trigger: ATTAACTGGGTTCCCCATCAAATCGTTTACATACAA...TGCCCCTTCCTTCGCACAGACATTTATATCCAGAGGGCTTTGGGGTGGTGAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 ENSMUST00000129589.8 |
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| 3UTR-3UTR CAA 90 bp | CAGGTTCACCCTCACTATGAAAGCTGCACTGCAAACTCATGCAACATACTCCCTTGTCATTTCAACCATTaGTCAGACAAAGTGACTACA | + |
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Preference number: 3 (lower is better) Translates to: QVHPHYESCTANSCNILPCHFNH*SDKVTT Trigger: TGTAGTCACTTTGTCTGACAAATGGTTGAAATGACA...AGGGAGTATGTTGCATGAGTTTGCAGTGCAGCTTTCATAGTGAGGGTGAACCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065308.13 |
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| 3UTR CCA 72 bp | ACTCAAGTTGTGCCACCCTTTAAGTTTTGGCATTTCTaGACCACAACAATGCATATGGTAGCTTGGAATTTT | + |
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Preference number: 3 (lower is better) Translates to: TQVVPPFKFWHF*TTTMHMVAWNF Trigger: AAAATTCCAAGCTACCATATGCATTGTTGTGGTCCAGAAATGCCAAAACTTAAAGGGTGGCACAACTTGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 ENSMUST00000129589.8 |
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| 3UTR-3UTR CAA 90 bp | CTAAATACACTAAACGTATCTAATGAAGTCACACTGGTCTTCCACTCACATGTGTTTAACCCCAATTATTaGGACATCAAGTTCCTTGGC | + |
|
Preference number: 3 (lower is better) Translates to: LNTLNVSNEVTLVFHSHVFNPNY*DIKFLG Trigger: GCCAAGGAACTTGATGTCCAAATAATTGGGGTTAAA...CACATGTGAGTGGAAGACCAGTGTGACTTCATTAGATACGTTTAGTGTATTTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129589.8 |
||
| 3UTR-3UTR CAA 90 bp | CAATGTACAGTAGACCAGAGCAATAAGGAAGAGTATATAGACGATGACTTCTGTTTGTATGTAAACGATTaGATGGGGAACCCAGTTAAT | + |
|
Preference number: 3 (lower is better) Translates to: QCTVDQSNKEEYIDDDFCLYVND*MGNPVN Trigger: ATTAACTGGGTTCCCCATCAAATCGTTTACATACAA...ACAGAAGTCATCGTCTATATACTCTTCCTTATTGCTCTGGTCTACTGTACATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065308.13 |
||
| 3UTR-3UTR CAA 90 bp | AAGAAACTAACCCTCAAAACAGACCACACACAACTAGTTCATAACTACCTTTGCACTGTAGGAAGTATGTaGATTATGTTGCCAGTATTC | + |
|
Preference number: 3 (lower is better) Translates to: KKLTLKTDHTQLVHNYLCTVGSM*IMLPVF Trigger: GAATACTGGCAACATAATCAACATACTTCCTACAGT...GCAAAGGTAGTTATGAACTAGTTGTGTGTGGTCTGTTTTGAGGGTTAGTTTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129589.8 |
||
| 3UTR TCA 72 bp | TATCTAATGAAGTCACACTGGTCTTCCACTCACATGTaGTATATCTGGGTGAAAGACATCAACTTTACAAGA | + |
|
Preference number: 3 (lower is better) Translates to: YLMKSHWSSTHM*YIWVKDINFTR Trigger: TCTTGTAAAGTTGATGTCTTTCACCCAGATATATCACATGTGAGTGGAAGACCAGTGTGACTTCATTAGATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 ENSMUST00000129589.8 |
||
| 3UTR CCA 72 bp | ATAAATAGCTGGCCTCTGAAAATCATTAAAAGCAGATaGTTCGTGGAAAGAATCTGCTCCCATGTTATCAAA | + |
|
Preference number: 3 (lower is better) Translates to: INSWPLKIIKSR*FVERICSHVIK Trigger: TTTGATAACATGGGAGCAGATTCTTTCCACGAACCATCTGCTTTTAATGATTTTCAGAGGCCAGCTATTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129589.8 |
||
| CDS-3UTR GCA 90 bp | CCTGGCAACAGTGTCAGGTTAGTGATGCTAAATCCTCCCCACCTCCACCAAGCTCCCAGTTCCAAGAGCTaGCAAGATCTCAAGCACGGC | + |
|
Preference number: 4 (lower is better) Translates to: PGNSVRLVMLNPPHLHQAPSSKS*QDLKHG Trigger: GCCGTGCTTGAGATCTTGGCAGCTCTTGGAACTGGG...AGCTTGGTGGAGGTGGGGAGGATTTAGCATCACTAACCTGACACTGTTGCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 ENSMUST00000129589.8 |
||
| CDS-3UTR GCA 90 bp | AATTCACCACCCCAAAGCCCTCTGGATATAAATGTCTGTGCGAAGGAAGGGGCACCCAGTTCCAAGAGCTaGCAAGATCTCAAGCACGGC | + |
|
Preference number: 4 (lower is better) Translates to: NSPPQSPLDINVCAKEGAPSSKS*QDLKHG Trigger: GCCGTGCTTGAGATCTTGGCAGCTCTTGGAACTGGG...TGCCCCTTCCTTCGCACAGACATTTATATCCAGAGGGCTTTGGGGTGGTGAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 ENSMUST00000129589.8 |
||
| CDS-3UTR CCA 90 bp | CCCTCTGGATATAAATGTCTGTGCGAAGGAAGGGGCATCAGGATGCTGGAAACACAAGCACGGCTGGAGTaGAGTTGCACTTCACCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PSGYKCLCEGRGIRMLETQARLE*SCTSPC Trigger: ACACGGTGAAGTGCAACTCCACTCCAGCCGTGCTTG...TGTTTCCAGCATCCTGATGCCCCTTCCTTCGCACAGACATTTATATCCAGAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 ENSMUST00000129589.8 |
||
| CDS-3UTR CCA 90 bp | TTAGTGATGCTAAATCCTCCCCACCTCCACCAAGCTTTAGTACGAAGGAAGAATCAAGCACGGCTGGAGTaGAGTTGCACTTCACCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LVMLNPPHLHQALVRRKNQARLE*SCTSPC Trigger: ACACGGTGAAGTGCAACTCCACTCCAGCCGTGCTTG...ATTCTTCCTTCGTACTAAAGCTTGGTGGAGGTGGGGAGGATTTAGCATCACTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 ENSMUST00000129589.8 |
||
| CDS-3UTR CCA 90 bp | ACCCCAAAGCCCTCTGGATATAAATGTCTGTGCGAAGGAAGGGGCATCAGGATGGGACATCAAGTTCCTTaGCACATTCCAAAAGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: TPKPSGYKCLCEGRGIRMGHQVP*HIPKDA Trigger: GGCATCTTTTGGAATGTGCCAAGGAACTTGATGTCC...CATCCTGATGCCCCTTCCTTCGCACAGACATTTATATCCAGAGGGCTTTGGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 |
||
| CDS-3UTR GCA 90 bp | CATAGTAGCTTCCAGGTTCTGAAATTATCTGAATGCCAGATCCTTCAGGGAAGTCCCAGTTCCAAGAGCTaGCAAGATCTCAAGCACGGC | + |
|
Preference number: 4 (lower is better) Translates to: HSSFQVLKLSECQILQGSPSSKS*QDLKHG Trigger: GCCGTGCTTGAGATCTTGGCAGCTCTTGGAACTGGG...ACTTCCCTGAAGGATCTGGCATTCAGATAATTTCAGAACCTGGAAGCTACTATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110328.9 ENSMUST00000129589.8 |
||
| CDS-3UTR GCA 90 bp | CCTGGCAACAGTGTCAGGTTAGTGATGCTAAATCCTCCCCACCTCCACCAAGCTAAGCCATTTCATTTTTaGTGGAACAAGCAAACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PGNSVRLVMLNPPHLHQAKPFHF*WNKQTQ Trigger: CTGGGTTTGCTTGTTCCAGCAAAAATGAAATGGCTT...AGCTTGGTGGAGGTGGGGAGGATTTAGCATCACTAACCTGACACTGTTGCCAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 ENSMUST00000129589.8 |
||
| CDS-3UTR CCA 90 bp | ATTAGCAATTTTGGGCTGTGTTACATACAACCACTCTCCTATGCAGATGGCAACCAAGCACGGCTGGAGTaGAGTTGCACTTCACCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ISNFGLCYIQPLSYADGNQARLE*SCTSPC Trigger: ACACGGTGAAGTGCAACTCCACTCCAGCCGTGCTTG...GTTGCCATCTGCATAGGAGAGTGGTTGTATGTAACACAGCCCAAAATTGCTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 ENSMUST00000129589.8 |
||
| CDS-3UTR TCA 90 bp | CCTCTGGATATAAATGTCTGTGCGAAGGAAGGGGCATCAGGATGCTGGAAACAGGCTGCATACTTTATCTaGGACACTTGCTTACAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PLDINVCAKEGASGCWKQAAYFI*DTCLQG Trigger: TCCTTGTAAGCAAGTGTCTCAGATAAAGTATGCAGC...CTGTTTCCAGCATCCTGATGCCCCTTCCTTCGCACAGACATTTATATCCAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 ENSMUST00000129589.8 |
||
| CDS-3UTR TCA 90 bp | ACCCCAAAGCCCTCTGGATATAAATGTCTGTGCGAAGGAAGGGGCATCAGGATGTTAACCTCTTCCAACTaGATTTCAGTTCCTGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TPKPSGYKCLCEGRGIRMLTSSN*ISVPVK Trigger: CTTCACAGGAACTGAAATTCAGTTGGAAGAGGTTAA...CATCCTGATGCCCCTTCCTTCGCACAGACATTTATATCCAGAGGGCTTTGGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 |
||
| CDS-3UTR GCA 90 bp | CTGGTCTTCCACTCACATGTGATATATCTGGGTGAAAGACATCAACTTTACAAGCCCAGTTCCAAGAGCTaGCAAGATCTCAAGCACGGC | + |
|
Preference number: 4 (lower is better) Translates to: LVFHSHVIYLGERHQLYKPSSKS*QDLKHG Trigger: GCCGTGCTTGAGATCTTGGCAGCTCTTGGAACTGGG...CTTGTAAAGTTGATGTCTTTCACCCAGATATATCACATGTGAGTGGAAGACCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 ENSMUST00000129589.8 |
||
| CDS-3UTR CCA 90 bp | ACCCCAAAGCCCTCTGGATATAAATGTCTGTGCGAAGGAAGGGGCATCAGGATGCCATTTCATTTTTGCTaGAACAAGCAAACCCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TPKPSGYKCLCEGRGIRMPFHFC*NKQTQF Trigger: GAACTGGGTTTGCTTGTTCCAGCAAAAATGAAATGG...CATCCTGATGCCCCTTCCTTCGCACAGACATTTATATCCAGAGGGCTTTGGGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 ENSMUST00000129589.8 |
||
| CDS-3UTR CCA 90 bp | CCTGGCAACAGTGTCAGGTTAGTGATGCTAAATCCTCCCCACCTCCACCAAGCTTGTGAACCTCTGGAATaGTATTTAAGTCCTCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: PGNSVRLVMLNPPHLHQACEPLE*YLSPQK Trigger: TTTCTGAGGACTTAAATACCATTCCAGAGGTTCACA...AGCTTGGTGGAGGTGGGGAGGATTTAGCATCACTAACCTGACACTGTTGCCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 |
||
| 3UTR CAA 72 bp | CACATTCAGCTCAGGAAGAAGACAGCTTTCCACAATTaGATCAAGCTCATCACAGGATGGACCCCAAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HIQLRKKTAFHN*IKLITGWTPKA Trigger: AGCCTTTGGGGTCCATCCTGTGATGAGCTTGATCAAATTGTGGAAAGCTGTCTTCTTCCTGAGCTGAATGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129589.8 |
||
| CDS-3UTR GCA 90 bp | ACCCCAAAGCCCTCTGGATATAAATGTCTGTGCGAAGGAAGGGGCATCAGGATGGCACATTCCAAAAGATaGCTACAATTCTTCAGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: TPKPSGYKCLCEGRGIRMAHSKR*LQFFSV Trigger: TACACTGAAGAATTGTAGGCATCTTTTGGAATGTGC...CATCCTGATGCCCCTTCCTTCGCACAGACATTTATATCCAGAGGGCTTTGGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 |
||
| CDS-3UTR CCA 90 bp | ACTAATAGACTCAACATCACCCAGGTTTTAAAAGGCGGTCCCATGAATATCCATGATCTCAAGCACGGCTaGAGTGGAGTTGCACTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: TNRLNITQVLKGGPMNIHDLKHG*SGVALH Trigger: GTGAAGTGCAACTCCACTCCAGCCGTGCTTGAGATC...ATGGATATTCATGGGACCGCCTTTTAAAACCTGGGTGATGTTGAGTCTATTAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065308.13 |
||
| CDS-3UTR CCA 90 bp | CCTCTGGATATAAATGTCTGTGCGAAGGAAGGGGCATCAGGATGCTGGAAACAGCCATTTCATTTTTGCTaGAACAAGCAAACCCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PLDINVCAKEGASGCWKQPFHFC*NKQTQF Trigger: GAACTGGGTTTGCTTGTTCCAGCAAAAATGAAATGG...CTGTTTCCAGCATCCTGATGCCCCTTCCTTCGCACAGACATTTATATCCAGAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 ENSMUST00000129589.8 |
||
| CDS-3UTR CCA 90 bp | AATTCACCACCCCAAAGCCCTCTGGATATAAATGTCTGTGCGAAGGAAGGGGCATATGTAGTAAGACCTTaGCATTTGGGTGATTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: NSPPQSPLDINVCAKEGAYVVRP*HLGDSL Trigger: CAAGGAATCACCCAAATGCCAAGGTCTTACTACATA...TGCCCCTTCCTTCGCACAGACATTTATATCCAGAGGGCTTTGGGGTGGTGAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 |
||
| CDS-3UTR TCA 90 bp | CCCTCTGGATATAAATGTCTGTGCGAAGGAAGGGGCATCAGGATGCTGGAAACATTTCATCATTGCATCTaGAGTAATTCCAGCATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PSGYKCLCEGRGIRMLETFHHCI*SNSSIL Trigger: CAAGATGCTGGAATTACTTCAGATGCAATGATGAAA...TGTTTCCAGCATCCTGATGCCCCTTCCTTCGCACAGACATTTATATCCAGAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 |
||
| CDS-3UTR GCA 90 bp | AATTCACCACCCCAAAGCCCTCTGGATATAAATGTCTGTGCGAAGGAAGGGGCAGCACATTCCAAAAGATaGCTACAATTCTTCAGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: NSPPQSPLDINVCAKEGAAHSKR*LQFFSV Trigger: TACACTGAAGAATTGTAGGCATCTTTTGGAATGTGC...TGCCCCTTCCTTCGCACAGACATTTATATCCAGAGGGCTTTGGGGTGGTGAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 |
||
| CDS-3UTR GCA 90 bp | CCTCTGGATATAAATGTCTGTGCGAAGGAAGGGGCATCAGGATGCTGGAAACAGTTCGTGGAAAGAATCTaGTCCCATGTTATCAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PLDINVCAKEGASGCWKQFVERI*SHVIKD Trigger: ATCTTTGATAACATGGGAGCAGATTCTTTCCACGAA...CTGTTTCCAGCATCCTGATGCCCCTTCCTTCGCACAGACATTTATATCCAGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 |
||
| CDS-3UTR CCA 90 bp | CTAAATACACTAAACGTATCTAATGAAGTCACACTGGTCTTCCACTCACATGTGGATCTCAAGCACGGCTaGAGTGGAGTTGCACTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LNTLNVSNEVTLVFHSHVDLKHG*SGVALH Trigger: GTGAAGTGCAACTCCACTCCAGCCGTGCTTGAGATC...CACATGTGAGTGGAAGACCAGTGTGACTTCATTAGATACGTTTAGTGTATTTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 ENSMUST00000129589.8 |
||
| CDS-3UTR TCA 90 bp | CAGGTTCACCCTCACTATGAAAGCTGCACTGCAAACTCATGCAACATACTCCCTTTCTTTGCAAGCACTTaGAACATGAAATTTAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: QVHPHYESCTANSCNILPFFAST*NMKFNP Trigger: GGGGTTAAATTTCATGTTTCAAGTGCTTGCAAAGAA...AGGGAGTATGTTGCATGAGTTTGCAGTGCAGCTTTCATAGTGAGGGTGAACCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065308.13 |
||
| CDS-3UTR CCA 90 bp | CATAGTAGCTTCCAGGTTCTGAAATTATCTGAATGCCAGATCCTTCAGGGAAGTGGACATCAAGTTCCTTaGCACATTCCAAAAGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: HSSFQVLKLSECQILQGSGHQVP*HIPKDA Trigger: GGCATCTTTTGGAATGTGCCAAGGAACTTGATGTCC...ACTTCCCTGAAGGATCTGGCATTCAGATAATTTCAGAACCTGGAAGCTACTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110328.9 |
||
| 3UTR CAA 72 bp | AATGCCTGTTTAAGCTTCAGTGGAAAAGCTGTCTTCTaGGCTCAGCTGAATACAAGAGGGTGCAAAGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: NACLSFSGKAVF*AQLNTRGCKEE Trigger: TTCTTCTTTGCACCCTCTTGTATTCAGCTGAGCCAAGAAGACAGCTTTTCCACTGAAGCTTAAACAGGCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129589.8 |
||
| CDS-3UTR TCA 90 bp | CATAGTAGCTTCCAGGTTCTGAAATTATCTGAATGCCAGATCCTTCAGGGAAGTGCTGCATACTTTATCTaGGACACTTGCTTACAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: HSSFQVLKLSECQILQGSAAYFI*DTCLQG Trigger: TCCTTGTAAGCAAGTGTCTCAGATAAAGTATGCAGC...ACTTCCCTGAAGGATCTGGCATTCAGATAATTTCAGAACCTGGAAGCTACTATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110328.9 ENSMUST00000129589.8 |
||
| CDS-3UTR TCA 90 bp | CAATGTACAGTAGACCAGAGCAATAAGGAAGAGTATATAGACGATGACTTCTGTGAATTTCAGTTCCTGTaGAGCCTCCACCGATGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: QCTVDQSNKEEYIDDDFCEFQFL*SLHRCL Trigger: TAGACATCGGTGGAGGCTTCACAGGAACTGAAATTC...ACAGAAGTCATCGTCTATATACTCTTCCTTATTGCTCTGGTCTACTGTACATTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065308.13 |
||
| CDS-3UTR TCA 90 bp | ATTAGCAATTTTGGGCTGTGTTACATACAACCACTCTCCTATGCAGATGGCAACCAGCTTTCCACAATTTaGTCAAGCTCATCACAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: ISNFGLCYIQPLSYADGNQLSTI*SSSSQD Trigger: ATCCTGTGATGAGCTTGATCAAATTGTGGAAAGCTG...GTTGCCATCTGCATAGGAGAGTGGTTGTATGTAACACAGCCCAAAATTGCTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 |
||
| CDS-3UTR CCA 90 bp | ATCTGCTCCCATGTTATCAAAGATAAGCCAATCTCCCACATTCAGCTCAGGAAGCCATTTCATTTTTGCTaGAACAAGCAAACCCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ICSHVIKDKPISHIQLRKPFHFC*NKQTQF Trigger: GAACTGGGTTTGCTTGTTCCAGCAAAAATGAAATGG...CTTCCTGAGCTGAATGTGGGAGATTGGCTTATCTTTGATAACATGGGAGCAGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129589.8 |
||
| CDS-3UTR TCA 90 bp | CCAGTTAATGGGCTTCCATCTCCACTAAGTCATCCATTTTGTTGCATATTTTATGAATTTCAGTTCCTGTaGAGCCTCCACCGATGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: PVNGLPSPLSHPFCCIFYEFQFL*SLHRCL Trigger: TAGACATCGGTGGAGGCTTCACAGGAACTGAAATTC...ATAAAATATGCAACAAAATGGATGACTTAGTGGAGATGGAAGCCCATTAACTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 |
||
| CDS-3UTR TCA 90 bp | ACTAATAGACTCAACATCACCCAGGTTTTAAAAGGCGGTCCCATGAATATCCATCAGCTTTCCACAATTTaGTCAAGCTCATCACAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TNRLNITQVLKGGPMNIHQLSTI*SSSSQD Trigger: ATCCTGTGATGAGCTTGATCAAATTGTGGAAAGCTG...ATGGATATTCATGGGACCGCCTTTTAAAACCTGGGTGATGTTGAGTCTATTAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065308.13 |
||
| CDS-3UTR TCA 90 bp | AAGAAACTAACCCTCAAAACAGACCACACACAACTAGTTCATAACTACCTTTGCGCTGCATACTTTATCTaGGACACTTGCTTACAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KKLTLKTDHTQLVHNYLCAAYFI*DTCLQG Trigger: TCCTTGTAAGCAAGTGTCTCAGATAAAGTATGCAGC...GCAAAGGTAGTTATGAACTAGTTGTGTGTGGTCTGTTTTGAGGGTTAGTTTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 ENSMUST00000129589.8 |
||
| CDS-3UTR CCA 90 bp | TATCTGAATGCCAGATCCTTCAGGGAAGTAAATATCCAACAGAGGACTGATAACCCATTTCATTTTTGCTaGAACAAGCAAACCCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: YLNARSFREVNIQQRTDNPFHFC*NKQTQF Trigger: GAACTGGGTTTGCTTGTTCCAGCAAAAATGAAATGG...GTTATCAGTCCTCTGTTGGATATTTACTTCCCTGAAGGATCTGGCATTCAGATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110328.9 ENSMUST00000129589.8 |
||
| CDS-3UTR CCA 90 bp | TTAGTGATGCTAAATCCTCCCCACCTCCACCAAGCTTTAGTACGAAGGAAGAATGAAAATGATGTTTTCTaGAGATACACCCAATTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LVMLNPPHLHQALVRRKNENDVF*RYTQFL Trigger: CAAGAATTGGGTGTATCTCCAGAAAACATCATTTTC...ATTCTTCCTTCGTACTAAAGCTTGGTGGAGGTGGGGAGGATTTAGCATCACTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 ENSMUST00000129589.8 |
||
| CDS-3UTR CCA 90 bp | AGTAGCTTCCAGGTTCTGAAATTATCTGAATGCCAGATCCTTCAGGGAAGTAAATATGTAGTAAGACCTTaGCATTTGGGTGATTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSFQVLKLSECQILQGSKYVVRP*HLGDSL Trigger: CAAGGAATCACCCAAATGCCAAGGTCTTACTACATA...TTTACTTCCCTGAAGGATCTGGCATTCAGATAATTTCAGAACCTGGAAGCTACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110328.9 |
||
| CDS-3UTR CCA 90 bp | CCAGTTAATGGGCTTCCATCTCCACTAAGTCATCCATTTTGTTGCATATTTTATAAAGCAGATGGTTCGTaGAAAGAATCTGCTCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: PVNGLPSPLSHPFCCIFYKADGS*KESAPM Trigger: CATGGGAGCAGATTCTTTCCACGAACCATCTGCTTT...ATAAAATATGCAACAAAATGGATGACTTAGTGGAGATGGAAGCCCATTAACTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 |
||
| CDS-3UTR CCA 90 bp | ATTAGCAATTTTGGGCTGTGTTACATACAACCACTCTCCTATGCAGATGGCAACATCATTAAAAGCAGATaGTTCGTGGAAAGAATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ISNFGLCYIQPLSYADGNIIKSR*FVERIC Trigger: GCAGATTCTTTCCACGAACCATCTGCTTTTAATGAT...GTTGCCATCTGCATAGGAGAGTGGTTGTATGTAACACAGCCCAAAATTGCTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 |
||
| CDS-3UTR CCA 90 bp | TTAGTGATGCTAAATCCTCCCCACCTCCACCAAGCTTTAGTACGAAGGAAGAATAACAATCTTGGCATTTaGGTGATTCCTTGCAATTTT | + |
|
Preference number: 4 (lower is better) Translates to: LVMLNPPHLHQALVRRKNNNLGI*VIPCNF Trigger: AAAATTGCAAGGAATCACCCAAATGCCAAGATTGTT...ATTCTTCCTTCGTACTAAAGCTTGGTGGAGGTGGGGAGGATTTAGCATCACTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129589.8 |
||
| CDS-3UTR TCA 90 bp | CTAAATACACTAAACGTATCTAATGAAGTCACACTGGTCTTCCACTCACATGTGTTAACCTCTTCCAACTaGATTTCAGTTCCTGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LNTLNVSNEVTLVFHSHVLTSSN*ISVPVK Trigger: CTTCACAGGAACTGAAATTCAGTTGGAAGAGGTTAA...CACATGTGAGTGGAAGACCAGTGTGACTTCATTAGATACGTTTAGTGTATTTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 |
||
| CDS-3UTR GCA 90 bp | ATTAGCAATTTTGGGCTGTGTTACATACAACCACTCTCCTATGCAGATGGCAACGATACACCCAATTCTTaGACTAAAGCCATTTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: ISNFGLCYIQPLSYADGNDTPNS*TKAISF Trigger: AAATGAAATGGCTTTAGTGCAAGAATTGGGTGTATC...GTTGCCATCTGCATAGGAGAGTGGTTGTATGTAACACAGCCCAAAATTGCTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 ENSMUST00000129589.8 |
||
| CDS-3UTR GCA 90 bp | CAATGTACAGTAGACCAGAGCAATAAGGAAGAGTATATAGACGATGACTTCTGTGTAATTCCAGCATCTTaGATCTCATACCAATCACTG | + |
|
Preference number: 4 (lower is better) Translates to: QCTVDQSNKEEYIDDDFCVIPAS*ISYQSL Trigger: CAGTGATTGGTATGAGATGCAAGATGCTGGAATTAC...ACAGAAGTCATCGTCTATATACTCTTCCTTATTGCTCTGGTCTACTGTACATTG 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065308.13 |
||
| CDS-3UTR GCA 90 bp | AAGAAACTAACCCTCAAAACAGACCACACACAACTAGTTCATAACTACCTTTGCGTAATTCCAGCATCTTaGATCTCATACCAATCACTG | + |
|
Preference number: 4 (lower is better) Translates to: KKLTLKTDHTQLVHNYLCVIPAS*ISYQSL Trigger: CAGTGATTGGTATGAGATGCAAGATGCTGGAATTAC...GCAAAGGTAGTTATGAACTAGTTGTGTGTGGTCTGTTTTGAGGGTTAGTTTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 |
||
| CDS-3UTR CCA 90 bp | CTGGTCTTCCACTCACATGTGATATATCTGGGTGAAAGACATCAACTTTACAAGTGTGAACCTCTGGAATaGTATTTAAGTCCTCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LVFHSHVIYLGERHQLYKCEPLE*YLSPQK Trigger: TTTCTGAGGACTTAAATACCATTCCAGAGGTTCACA...CTTGTAAAGTTGATGTCTTTCACCCAGATATATCACATGTGAGTGGAAGACCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 |
||
| CDS-3UTR TCA 90 bp | CTAAATACACTAAACGTATCTAATGAAGTCACACTGGTCTTCCACTCACATGTGTTCTTTGCAAGCACTTaGAACATGAAATTTAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: LNTLNVSNEVTLVFHSHVFFAST*NMKFNP Trigger: GGGGTTAAATTTCATGTTTCAAGTGCTTGCAAAGAA...CACATGTGAGTGGAAGACCAGTGTGACTTCATTAGATACGTTTAGTGTATTTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 |
||
| CDS-3UTR TCA 90 bp | CAATGTACAGTAGACCAGAGCAATAAGGAAGAGTATATAGACGATGACTTCTGTTTTCATCATTGCATCTaGAGTAATTCCAGCATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QCTVDQSNKEEYIDDDFCFHHCI*SNSSIL Trigger: CAAGATGCTGGAATTACTTCAGATGCAATGATGAAA...ACAGAAGTCATCGTCTATATACTCTTCCTTATTGCTCTGGTCTACTGTACATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065308.13 |
||
| CDS-3UTR GCA 90 bp | AGCTTCCAGGTTCTGAAATTATCTGAATGCCAGATCCTTCAGGGAAGTAAATATGCACATTCCAAAAGATaGCTACAATTCTTCAGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SFQVLKLSECQILQGSKYAHSKR*LQFFSV Trigger: TACACTGAAGAATTGTAGGCATCTTTTGGAATGTGC...ATATTTACTTCCCTGAAGGATCTGGCATTCAGATAATTTCAGAACCTGGAAGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110328.9 |
||
| CDS-3UTR CCA 90 bp | TATCTGAATGCCAGATCCTTCAGGGAAGTAAATATCCAACAGAGGACTGATAACGAAAATGATGTTTTCTaGAGATACACCCAATTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: YLNARSFREVNIQQRTDNENDVF*RYTQFL Trigger: CAAGAATTGGGTGTATCTCCAGAAAACATCATTTTC...GTTATCAGTCCTCTGTTGGATATTTACTTCCCTGAAGGATCTGGCATTCAGATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110328.9 ENSMUST00000129589.8 |
||
| CDS-3UTR CCA 90 bp | CCAGTTAATGGGCTTCCATCTCCACTAAGTCATCCATTTTGTTGCATATTTTATTATGTAGTAAGACCTTaGCATTTGGGTGATTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PVNGLPSPLSHPFCCIFYYVVRP*HLGDSL Trigger: CAAGGAATCACCCAAATGCCAAGGTCTTACTACATA...ATAAAATATGCAACAAAATGGATGACTTAGTGGAGATGGAAGCCCATTAACTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 |
||
| CDS-3UTR CCA 90 bp | AAAAGGCGGTCCCATGAATATCCATTCATTAAAAGCTTCATTGTGCTAGGCAATATCATTAAAAGCAGATaGTTCGTGGAAAGAATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KRRSHEYPFIKSFIVLGNIIKSR*FVERIC Trigger: GCAGATTCTTTCCACGAACCATCTGCTTTTAATGAT...ATTGCCTAGCACAATGAAGCTTTTAATGAATGGATATTCATGGGACCGCCTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065308.13 |
||
| CDS-3UTR GCA 90 bp | GTTCTGAAATTATCTGAATGCCAGATCCTTCAGGGAAGTAAATATCCAACAGAGGATACACCCAATTCTTaGACTAAAGCCATTTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: VLKLSECQILQGSKYPTEDTPNS*TKAISF Trigger: AAATGAAATGGCTTTAGTGCAAGAATTGGGTGTATC...CTCTGTTGGATATTTACTTCCCTGAAGGATCTGGCATTCAGATAATTTCAGAAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110328.9 ENSMUST00000129589.8 |
||
| CDS-3UTR GCA 90 bp | CTAAATACACTAAACGTATCTAATGAAGTCACACTGGTCTTCCACTCACATGTGGATACACCCAATTCTTaGACTAAAGCCATTTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: LNTLNVSNEVTLVFHSHVDTPNS*TKAISF Trigger: AAATGAAATGGCTTTAGTGCAAGAATTGGGTGTATC...CACATGTGAGTGGAAGACCAGTGTGACTTCATTAGATACGTTTAGTGTATTTAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 ENSMUST00000129589.8 |
||
| CDS-3UTR CCA 90 bp | AAAAGGCGGTCCCATGAATATCCATTCATTAAAAGCTTCATTGTGCTAGGCAATGAAAATGATGTTTTCTaGAGATACACCCAATTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KRRSHEYPFIKSFIVLGNENDVF*RYTQFL Trigger: CAAGAATTGGGTGTATCTCCAGAAAACATCATTTTC...ATTGCCTAGCACAATGAAGCTTTTAATGAATGGATATTCATGGGACCGCCTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000065308.13 |
||
| CDS-3UTR CCA 90 bp | AGCTTCCAGGTTCTGAAATTATCTGAATGCCAGATCCTTCAGGGAAGTAAATATGAAAATGATGTTTTCTaGAGATACACCCAATTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SFQVLKLSECQILQGSKYENDVF*RYTQFL Trigger: CAAGAATTGGGTGTATCTCCAGAAAACATCATTTTC...ATATTTACTTCCCTGAAGGATCTGGCATTCAGATAATTTCAGAACCTGGAAGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110328.9 ENSMUST00000129589.8 |
||
| CDS-3UTR CCA 90 bp | CTAAATACACTAAACGTATCTAATGAAGTCACACTGGTCTTCCACTCACATGTGAATGAAAAACAATCTTaGCATTTGGGTGATTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LNTLNVSNEVTLVFHSHVNEKQS*HLGDSL Trigger: CAAGGAATCACCCAAATGCCAAGATTGTTTTTCATT...CACATGTGAGTGGAAGACCAGTGTGACTTCATTAGATACGTTTAGTGTATTTAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129589.8 |
||
| CDS-3UTR GCA 90 bp | CCAGTTAATGGGCTTCCATCTCCACTAAGTCATCCATTTTGTTGCATATTTTATGATACACCCAATTCTTaGACTAAAGCCATTTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: PVNGLPSPLSHPFCCIFYDTPNS*TKAISF Trigger: AAATGAAATGGCTTTAGTGCAAGAATTGGGTGTATC...ATAAAATATGCAACAAAATGGATGACTTAGTGGAGATGGAAGCCCATTAACTGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 ENSMUST00000129589.8 |
||
| CDS GCA 90 bp | CAGTTCCAAGAGCTGCCAAGATCTCAAGCACGGCTGGAGTGGAGTTaGACTTCACCGTGTAAAACGGCTTTATCTGAGCCACCACGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: QFQELPRSQARLEWS*TSPCKTALSEPPRS Trigger: AGACCGTGGTGGCTCAGATAAAGCCGTTTTACACGGTGAAGTGCAACTCCACTCCAGCCGTGCTTGAGATCTTGGCAGCTCTTGGAACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 ENSMUST00000129589.8 ENSMUST00000151319.8 |
||
| CDS CCA 90 bp | CAAACCCAGTTCCAAGAGCTGCCAAGATCTCAAGCACGGCTGGAGTaGAGTTGCACTTCACCGTGTAAAACGGCTTTATCTGAGCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: QTQFQELPRSQARLE*SCTSPCKTALSEPP Trigger: TGGTGGCTCAGATAAAGCCGTTTTACACGGTGAAGTGCAACTCCACTCCAGCCGTGCTTGAGATCTTGGCAGCTCTTGGAACTGGGTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 ENSMUST00000129589.8 ENSMUST00000151319.8 |
||
| CDS CCA 90 bp | ACAAGCAAACCCAGTTCCAAGAGCTGCCAAGATCTCAAGCACGGCTaGAGTGGAGTTGCACTTCACCGTGTAAAACGGCTTTATCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: TSKPSSKSCQDLKHG*SGVALHRVKRLYLS Trigger: GCTCAGATAAAGCCGTTTTACACGGTGAAGTGCAACTCCACTCCAGCCGTGCTTGAGATCTTGGCAGCTCTTGGAACTGGGTTTGCTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 ENSMUST00000129589.8 ENSMUST00000151319.8 |
||
| CDS GCA 90 bp | AGCCATTTCATTTTTGCTGGAACAAGCAAACCCAGTTCCAAGAGCTaGCAAGATCTCAAGCACGGCTGGAGTGGAGTTGCACTTCACCGT | + |
|
Preference number: 5 (lower is better) Translates to: SHFIFAGTSKPSSKS*QDLKHGWSGVALHR Trigger: ACGGTGAAGTGCAACTCCACTCCAGCCGTGCTTGAGATCTTGGCAGCTCTTGGAACTGGGTTTGCTTGTTCCAGCAAAAATGAAATGGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 ENSMUST00000129589.8 ENSMUST00000151319.8 |
||
| CDS-3UTR CAA 90 bp | ACCCCAAAGCCCTCTGGATATAAATGTCTGTGCGAAGGAAGGGGCATCAGGATGTGGACATCAAGTTCCTaGGCACATTCCAAAAGATGC | + |
|
Preference number: 5 (lower is better) Translates to: TPKPSGYKCLCEGRGIRMWTSSS*AHSKRC Trigger: GCATCTTTTGGAATGTGCCAAGGAACTTGATGTCCA...CATCCTGATGCCCCTTCCTTCGCACAGACATTTATATCCAGAGGGCTTTGGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 |
||
| CDS-3UTR CAA 90 bp | CCTGGCAACAGTGTCAGGTTAGTGATGCTAAATCCTCCCCACCTCCACCAAGCTAAAGCCATTTCATTTTaGCTGGAACAAGCAAACCCA | + |
|
Preference number: 5 (lower is better) Translates to: PGNSVRLVMLNPPHLHQAKAISF*LEQANP Trigger: TGGGTTTGCTTGTTCCAGCAAAAATGAAATGGCTTT...AGCTTGGTGGAGGTGGGGAGGATTTAGCATCACTAACCTGACACTGTTGCCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 ENSMUST00000129589.8 |
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| CDS-3UTR CAA 90 bp | AATTCACCACCCCAAAGCCCTCTGGATATAAATGTCTGTGCGAAGGAAGGGGCATGGACATCAAGTTCCTaGGCACATTCCAAAAGATGC | + |
|
Preference number: 5 (lower is better) Translates to: NSPPQSPLDINVCAKEGAWTSSS*AHSKRC Trigger: GCATCTTTTGGAATGTGCCAAGGAACTTGATGTCCA...TGCCCCTTCCTTCGCACAGACATTTATATCCAGAGGGCTTTGGGGTGGTGAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 |
||
| CDS-3UTR CAA 90 bp | CCTGGCAACAGTGTCAGGTTAGTGATGCTAAATCCTCCCCACCTCCACCAAGCTTTTAACCCCAATTATTaGGACATCAAGTTCCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PGNSVRLVMLNPPHLHQAFNPNY*DIKFLG Trigger: GCCAAGGAACTTGATGTCCAAATAATTGGGGTTAAA...AGCTTGGTGGAGGTGGGGAGGATTTAGCATCACTAACCTGACACTGTTGCCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 |
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| CDS-3UTR CAA 90 bp | CCTCTGGATATAAATGTCTGTGCGAAGGAAGGGGCATCAGGATGCTGGAAACAGACAGCTTTCCACAATTaGATCAAGCTCATCACAGGA | + |
|
Preference number: 5 (lower is better) Translates to: PLDINVCAKEGASGCWKQTAFHN*IKLITG Trigger: TCCTGTGATGAGCTTGATCAAATTGTGGAAAGCTGT...CTGTTTCCAGCATCCTGATGCCCCTTCCTTCGCACAGACATTTATATCCAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 |
||
| CDS-3UTR CAA 90 bp | ACCCCAAAGCCCTCTGGATATAAATGTCTGTGCGAAGGAAGGGGCATCAGGATGAGTAATTCCAGCATCTaGCATCTCATACCAATCACT | + |
|
Preference number: 5 (lower is better) Translates to: TPKPSGYKCLCEGRGIRMSNSSI*HLIPIT Trigger: AGTGATTGGTATGAGATGCAAGATGCTGGAATTACT...CATCCTGATGCCCCTTCCTTCGCACAGACATTTATATCCAGAGGGCTTTGGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 |
||
| CDS-3UTR CAA 90 bp | CCCTCTGGATATAAATGTCTGTGCGAAGGAAGGGGCATCAGGATGCTGGAAACAAAAGCCATTTCATTTTaGCTGGAACAAGCAAACCCA | + |
|
Preference number: 5 (lower is better) Translates to: PSGYKCLCEGRGIRMLETKAISF*LEQANP Trigger: TGGGTTTGCTTGTTCCAGCAAAAATGAAATGGCTTT...TGTTTCCAGCATCCTGATGCCCCTTCCTTCGCACAGACATTTATATCCAGAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 ENSMUST00000129589.8 |
||
| CDS-3UTR CAA 90 bp | CCTCTGGATATAAATGTCTGTGCGAAGGAAGGGGCATCAGGATGCTGGAAACAGCTTTATCTGAGACACTaGCTTACAAGGACTTGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: PLDINVCAKEGASGCWKQLYLRH*LTRTCE Trigger: TTCACAAGTCCTTGTAAGCAAGTGTCTCAGATAAAG...CTGTTTCCAGCATCCTGATGCCCCTTCCTTCGCACAGACATTTATATCCAGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 ENSMUST00000129589.8 |
||
| CDS-3UTR CAA 90 bp | TTAGTGATGCTAAATCCTCCCCACCTCCACCAAGCTTTAGTACGAAGGAAGAATACAGCTTTCCACAATTaGATCAAGCTCATCACAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LVMLNPPHLHQALVRRKNTAFHN*IKLITG Trigger: TCCTGTGATGAGCTTGATCAAATTGTGGAAAGCTGT...ATTCTTCCTTCGTACTAAAGCTTGGTGGAGGTGGGGAGGATTTAGCATCACTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 |
||
| CDS-3UTR CAA 90 bp | TTAGTGATGCTAAATCCTCCCCACCTCCACCAAGCTTTAGTACGAAGGAAGAATTTTAACCCCAATTATTaGGACATCAAGTTCCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LVMLNPPHLHQALVRRKNFNPNY*DIKFLG Trigger: GCCAAGGAACTTGATGTCCAAATAATTGGGGTTAAA...ATTCTTCCTTCGTACTAAAGCTTGGTGGAGGTGGGGAGGATTTAGCATCACTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 |
||
| CDS-3UTR CAA 90 bp | CTGGTCTTCCACTCACATGTGATATATCTGGGTGAAAGACATCAACTTTACAAGGGAAAAGCTGTCTTCTaGGCTCAGCTGAATACAAGA | + |
|
Preference number: 5 (lower is better) Translates to: LVFHSHVIYLGERHQLYKGKAVF*AQLNTR Trigger: TCTTGTATTCAGCTGAGCCAAGAAGACAGCTTTTCC...CTTGTAAAGTTGATGTCTTTCACCCAGATATATCACATGTGAGTGGAAGACCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 |
||
| CDS-3UTR CAA 90 bp | GTTCTGAAATTATCTGAATGCCAGATCCTTCAGGGAAGTAAATATCCAACAGAGTGGACATCAAGTTCCTaGGCACATTCCAAAAGATGC | + |
|
Preference number: 5 (lower is better) Translates to: VLKLSECQILQGSKYPTEWTSSS*AHSKRC Trigger: GCATCTTTTGGAATGTGCCAAGGAACTTGATGTCCA...CTCTGTTGGATATTTACTTCCCTGAAGGATCTGGCATTCAGATAATTTCAGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110328.9 |
||
| CDS-3UTR CAA 90 bp | AGGACTGATAACATGATTAACCTCTTCCAACTGAATTTCAGTTCCTGTGAAGCCCTTAACCCCAATTATTaGGACATCAAGTTCCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: RTDNMINLFQLNFSSCEALNPNY*DIKFLG Trigger: GCCAAGGAACTTGATGTCCAAATAATTGGGGTTAAG...GGCTTCACAGGAACTGAAATTCAGTTGGAAGAGGTTAATCATGTTATCAGTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110328.9 |
||
| CDS-3UTR CAA 90 bp | TATCTGAATGCCAGATCCTTCAGGGAAGTAAATATCCAACAGAGGACTGATAACAAAGCCATTTCATTTTaGCTGGAACAAGCAAACCCA | + |
|
Preference number: 5 (lower is better) Translates to: YLNARSFREVNIQQRTDNKAISF*LEQANP Trigger: TGGGTTTGCTTGTTCCAGCAAAAATGAAATGGCTTT...GTTATCAGTCCTCTGTTGGATATTTACTTCCCTGAAGGATCTGGCATTCAGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110328.9 ENSMUST00000129589.8 |
||
| CDS-3UTR CAA 90 bp | AAGAAACTAACCCTCAAAACAGACCACACACAACTAGTTCATAACTACCTTTGCAAAGCCATTTCATTTTaGCTGGAACAAGCAAACCCA | + |
|
Preference number: 5 (lower is better) Translates to: KKLTLKTDHTQLVHNYLCKAISF*LEQANP Trigger: TGGGTTTGCTTGTTCCAGCAAAAATGAAATGGCTTT...GCAAAGGTAGTTATGAACTAGTTGTGTGTGGTCTGTTTTGAGGGTTAGTTTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 ENSMUST00000129589.8 |
||
| CDS-3UTR CAA 90 bp | AAGAAACTAACCCTCAAAACAGACCACACACAACTAGTTCATAACTACCTTTGCAGTAATTCCAGCATCTaGCATCTCATACCAATCACT | + |
|
Preference number: 5 (lower is better) Translates to: KKLTLKTDHTQLVHNYLCSNSSI*HLIPIT Trigger: AGTGATTGGTATGAGATGCAAGATGCTGGAATTACT...GCAAAGGTAGTTATGAACTAGTTGTGTGTGGTCTGTTTTGAGGGTTAGTTTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 |
||
| CDS CCA 72 bp | CCCAGTTCCAAGAGCTGCCAAGATCTCAAGCACGGCTaGAGTGGAGTTGCACTTCACCGTGTAAAACGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: PSSKSCQDLKHG*SGVALHRVKRL Trigger: AAGCCGTTTTACACGGTGAAGTGCAACTCCACTCCAGCCGTGCTTGAGATCTTGGCAGCTCTTGGAACTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 ENSMUST00000129589.8 ENSMUST00000151319.8 |
||
| CDS GCA 72 bp | GAGCTGCCAAGATCTCAAGCACGGCTGGAGTGGAGTTaGACTTCACCGTGTAAAACGGCTTTATCTGAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: ELPRSQARLEWS*TSPCKTALSEP Trigger: TGGCTCAGATAAAGCCGTTTTACACGGTGAAGTGCAACTCCACTCCAGCCGTGCTTGAGATCTTGGCAGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 ENSMUST00000129589.8 ENSMUST00000151319.8 |
||
| CDS GCA 72 bp | ATTTTTGCTGGAACAAGCAAACCCAGTTCCAAGAGCTaGCAAGATCTCAAGCACGGCTGGAGTGGAGTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: IFAGTSKPSSKS*QDLKHGWSGVA Trigger: TGCAACTCCACTCCAGCCGTGCTTGAGATCTTGGCAGCTCTTGGAACTGGGTTTGCTTGTTCCAGCAAAAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 ENSMUST00000129589.8 ENSMUST00000151319.8 |
||
| CDS CCA 72 bp | TTCCAAGAGCTGCCAAGATCTCAAGCACGGCTGGAGTaGAGTTGCACTTCACCGTGTAAAACGGCTTTATCT | + |
|
Preference number: 6 (lower is better) Translates to: FQELPRSQARLE*SCTSPCKTALS Trigger: AGATAAAGCCGTTTTACACGGTGAAGTGCAACTCCACTCCAGCCGTGCTTGAGATCTTGGCAGCTCTTGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065308.13 ENSMUST00000110329.8 ENSMUST00000129589.8 ENSMUST00000151319.8 |
||
| CDS GCA 72 bp | ATTTTTGCTGGAACAAGCAAACCCAGTTCCAAGAGCTaGCAAGATCTCAAGCACGGCTGGAGTGGAGTTGNN | + |
|
Preference number: 6 (lower is better) Translates to: IFAGTSKPSSKS*QDLKHGWSGVX Trigger: NNCAACTCCACTCCAGCCGTGCTTGAGATCTTGGCAGCTCTTGGAACTGGGTTTGCTTGTTCCAGCAAAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110328.9 |
||
| CDS CAA 90 bp | AAAGCCAAACTCTCCTTAACCCCAATTATTTGGACATCAAGTTCCTaGGCACATTCCAAAAGATGCCTACAATTCTTCAGTGTAGTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: KAKLSLTPIIWTSSS*AHSKRCLQFFSVVP Trigger: TGGCACTACACTGAAGAATTGTAGGCATCTTTTGGAATGTGCCAAGGAACTTGATGTCCAAATAATTGGGGTTAAGGAGAGTTTGGCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110328.9 |
||
| CDS CAA 72 bp | CTCTCCTTAACCCCAATTATTTGGACATCAAGTTCCTaGGCACATTCCAAAAGATGCCTACAATTCTTCAGT | + |
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Preference number: 6 (lower is better) Translates to: LSLTPIIWTSSS*AHSKRCLQFFS Trigger: ACTGAAGAATTGTAGGCATCTTTTGGAATGTGCCAAGGAACTTGATGTCCAAATAATTGGGGTTAAGGAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110328.9 |
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