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Pregenerated sensors for AYM1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000053873

Ensembl transcript IDs: ENSMUST00000066573.2

Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp AGGGATTGGGAGGGGGCATGTTTTAGGATGATGTGTGCTCCATTAACTCTTCGTTGTGAAGTGGAAATTTaGAGCCCACTTCTTTCCCAC +
Preference number: 2 (lower is better)
Translates to: RDWEGACFRMMCAPLTLRCEVEI*SPLLSH
Trigger: GTGGGAAAGAAGTGGGCTTCAAATTTCCACTTCACA...ACGAAGAGTTAATGGAGCACACATCATCCTAAAACATGCCCCCTCCCAATCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000066573.2
3UTR TCA 72 bp ACTCTTCGTGCTCCAGGAGGATGTGAAGTGGAAATTTaGAGCCCACTTCTTTCCCACCAGGGGCATCGGCTG +
Preference number: 3 (lower is better)
Translates to: TLRAPGGCEVEI*SPLLSHQGHRL
Trigger: CAGCCGATGCCCCTGGTGGGAAAGAAGTGGGCTTCAAATTTCCACTTCACATCCTCCTGGAGCACGAAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066573.2
3UTR TCA 72 bp GTGTGCTCCATTAACTCTTCGTGCTCCAGGAGGATGTaGAGTGGAAATTTGAAGCCCACTTCTTTCCCACCA +
Preference number: 3 (lower is better)
Translates to: VCSINSSCSRRM*SGNLKPTSFPP
Trigger: TGGTGGGAAAGAAGTGGGCTTCAAATTTCCACTTCACATCCTCCTGGAGCACGAAGAGTTAATGGAGCACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066573.2
CDS-3UTR TCA 90 bp AATTTGAAGCCCACTTCTTTCCCACCAGGGGCATCGGCTGAGAGCAGAGAGCAGAAGCTCAGTGGAGAATaGCCCCGTGCAGTGCGCGTG +
Preference number: 4 (lower is better)
Translates to: NLKPTSFPPGASAESREQKLSGE*PRAVRV
Trigger: CACGCGCACTGCACGGGGTCATTCTCCACTGAGCTT...CTGCTCTCTGCTCTCAGCCGATGCCCCTGGTGGGAAAGAAGTGGGCTTCAAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066573.2