Pregenerated sensors for AYM1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000053873

Ensembl transcript IDs: ENSMUST00000066573.2

Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR-3UTR TCA 90 bp	AGGGATTGGGAGGGGGCATGTTTTAGGATGATGTGTGCTCCATTAACTCTTCGTTGTGAAGTGGAAATTTaGAGCCCACTTCTTTCCCAC	+
Preference number: 2 (lower is better) Translates to: RDWEGACFRMMCAPLTLRCEVEI*SPLLSH Trigger: GTGGGAAAGAAGTGGGCTTCAAATTTCCACTTCACA...ACGAAGAGTTAATGGAGCACACATCATCCTAAAACATGCCCCCTCCCAATCCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066573.2
3UTR TCA 72 bp	ACTCTTCGTGCTCCAGGAGGATGTGAAGTGGAAATTTaGAGCCCACTTCTTTCCCACCAGGGGCATCGGCTG	+
Preference number: 3 (lower is better) Translates to: TLRAPGGCEVEI*SPLLSHQGHRL Trigger: CAGCCGATGCCCCTGGTGGGAAAGAAGTGGGCTTCAAATTTCCACTTCACATCCTCCTGGAGCACGAAGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066573.2
3UTR TCA 72 bp	GTGTGCTCCATTAACTCTTCGTGCTCCAGGAGGATGTaGAGTGGAAATTTGAAGCCCACTTCTTTCCCACCA	+
Preference number: 3 (lower is better) Translates to: VCSINSSCSRRM*SGNLKPTSFPP Trigger: TGGTGGGAAAGAAGTGGGCTTCAAATTTCCACTTCACATCCTCCTGGAGCACGAAGAGTTAATGGAGCACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066573.2
CDS-3UTR TCA 90 bp	AATTTGAAGCCCACTTCTTTCCCACCAGGGGCATCGGCTGAGAGCAGAGAGCAGAAGCTCAGTGGAGAATaGCCCCGTGCAGTGCGCGTG	+
Preference number: 4 (lower is better) Translates to: NLKPTSFPPGASAESREQKLSGE*PRAVRV Trigger: CACGCGCACTGCACGGGGTCATTCTCCACTGAGCTT...CTGCTCTCTGCTCTCAGCCGATGCCCCTGGTGGGAAAGAAGTGGGCTTCAAATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066573.2

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