Pregenerated sensors for AWAT2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031220Ensembl transcript IDs: ENSMUST00000033567.15, ENSMUST00000147103.2
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAATGGCAGACACACAAGGTCTTAGAGCCCTCCAAACAGACCAGCTaGAGCACACAGTACCAGAGATGGGCTGTTTATTCCACCTACAGG | + |
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Preference number: 1 (lower is better) Translates to: QWQTHKVLEPSKQTS*STQYQRWAVYSTYR Trigger: CCTGTAGGTGGAATAAACAGCCCATCTCTGGTACTGTGTGCTCCAGCTGGTCTGTTTGGAGGGCTCTAAGACCTTGTGTGTCTGCCATTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| 3UTR TCA 90 bp | GGCTGTTTATTCCACCTACAGGTTTCCTTGCTGCTAATGCTTTCATaGAAGTCCAATGACTTCAGTGGACTTTTGCCTAGAGTCTTCTCT | + |
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Preference number: 1 (lower is better) Translates to: GCLFHLQVSLLLMLS*KSNDFSGLLPRVFS Trigger: AGAGAAGACTCTAGGCAAAAGTCCACTGAAGTCATTGGACTTTCATGAAAGCATTAGCAGCAAGGAAACCTGTAGGTGGAATAAACAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGCTCTTGAGATACCCAGTCCTGTAAGAGTCTTGAAGCCAGGACAATGGCAGCCCACCTCCCTCCAGTaGGGACCAGTCAAGTCAGAA | + |
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Preference number: 2 (lower is better) Translates to: LALEIPSPVRVLKPGQWQPTSLQ*GPVKSE Trigger: TTCTGACTTGACTGGTCCTCACTGGAGGGAGGTGGG...CTGCCATTGTCCTGGCTTCAAGACTCTTACAGGACTGGGTATCTCAAGAGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| 3UTR-3UTR TCA 90 bp | CATTTAATTTTGACAGAAACCTTTGAGGTAAGCAAGGGAAGGATTGTTAGTCCCAAACATCATAGGTCTTaGGCATGCTACGGACTGAAC | + |
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Preference number: 2 (lower is better) Translates to: HLILTETFEVSKGRIVSPKHHRS*ACYGLN Trigger: GTTCAGTCCGTAGCATGCTCAAGACCTATGATGTTT...GGGACTAACAATCCTTCCCTTGCTTACCTCAAAGGTTTCTGTCAAAATTAAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| 3UTR GCA 72 bp | GTGGGAAAGGATGGGCACAGAAAACAACCACATGGATaGACACCCCCACCTCCCTCCAGTGAGGACCAGTCA | + |
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Preference number: 3 (lower is better) Translates to: VGKDGHRKQPHG*TPPPPSSEDQS Trigger: TGACTGGTCCTCACTGGAGGGAGGTGGGGGTGTGCATCCATGTGGTTGTTTTCTGTGCCCATCCTTTCCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| 3UTR TCA 72 bp | CCACCTCCCTCCAGTGAGGACCAGTCAAGTCAGAAGTaGAGCTCCACAGGTAACCTTGCCCTGTTGTCATCA | + |
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Preference number: 3 (lower is better) Translates to: PPPSSEDQSSQK*SSTGNLALLSS Trigger: TGATGACAACAGGGCAAGGTTACCTGTGGAGCTTCACTTCTGACTTGACTGGTCCTCACTGGAGGGAGGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| 3UTR TCA 72 bp | GCATGCTACGGACTGAACCCAATGTCCCCTGGCTCTTaGGATACCCAGTCCTGTAAGAGTCTTGAAGCCAGG | + |
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Preference number: 3 (lower is better) Translates to: ACYGLNPMSPGS*DTQSCKSLEAR Trigger: CCTGGCTTCAAGACTCTTACAGGACTGGGTATCTCAAGAGCCAGGGGACATTGGGTTCAGTCCGTAGCATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| 3UTR-3UTR CAA 90 bp | GAGCCCTCCAAACAGACCAGCTGGAGCACACAGTACCAGAGATGGGCTGTTTATGGTAACCTTGCCCTGTaGTCATCAGTTCCACACCAT | + |
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Preference number: 3 (lower is better) Translates to: EPSKQTSWSTQYQRWAVYGNLAL*SSVPHH Trigger: ATGGTGTGGAACTGATGACAACAGGGCAAGGTTACC...ATAAACAGCCCATCTCTGGTACTGTGTGCTCCAGCTGGTCTGTTTGGAGGGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| 3UTR-3UTR CAA 90 bp | TGTCCCCTGGCTCTTGAGATACCCAGTCCTGTAAGAGTCTTGAAGCCAGGACAAGGTAACCTTGCCCTGTaGTCATCAGTTCCACACCAT | + |
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Preference number: 3 (lower is better) Translates to: CPLALEIPSPVRVLKPGQGNLAL*SSVPHH Trigger: ATGGTGTGGAACTGATGACAACAGGGCAAGGTTACC...TTGTCCTGGCTTCAAGACTCTTACAGGACTGGGTATCTCAAGAGCCAGGGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| 3UTR CCA 72 bp | TCCAAACAGACCAGCTGGAGCACACAGTACCAGAGATaGGCTGTTTATTCCACCTACAGGTTTCCTTGCTGC | + |
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Preference number: 3 (lower is better) Translates to: SKQTSWSTQYQR*AVYSTYRFPCC Trigger: GCAGCAAGGAAACCTGTAGGTGGAATAAACAGCCCATCTCTGGTACTGTGTGCTCCAGCTGGTCTGTTTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| 3UTR CCA 72 bp | ATACCCAGTCCTGTAAGAGTCTTGAAGCCAGGACAATaGCAGACACACAAGGTCTTAGAGCCCTCCAAACAG | + |
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Preference number: 3 (lower is better) Translates to: IPSPVRVLKPGQ*QTHKVLEPSKQ Trigger: CTGTTTGGAGGGCTCTAAGACCTTGTGTGTCTGCCATTGTCCTGGCTTCAAGACTCTTACAGGACTGGGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| 3UTR-3UTR CAA 90 bp | ACAGTACCAGAGATGGGCTGTTTATTCCACCTACAGGTTTCCTTGCTGCTAATGGACTTCAGTGGACTTTaGCCTAGAGTCTTCTCTGTC | + |
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Preference number: 3 (lower is better) Translates to: TVPEMGCLFHLQVSLLLMDFSGL*PRVFSV Trigger: GACAGAGAAGACTCTAGGCAAAAGTCCACTGAAGTC...CATTAGCAGCAAGGAAACCTGTAGGTGGAATAAACAGCCCATCTCTGGTACTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| 3UTR TCA 72 bp | TTCCACCTACAGGTTTCCTTGCTGCTAATGCTTTCATaGAAGTCCAATGACTTCAGTGGACTTTTGCCTAGA | + |
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Preference number: 3 (lower is better) Translates to: FHLQVSLLLMLS*KSNDFSGLLPR Trigger: TCTAGGCAAAAGTCCACTGAAGTCATTGGACTTTCATGAAAGCATTAGCAGCAAGGAAACCTGTAGGTGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| 3UTR-3UTR CAA 90 bp | CATTTAATTTTGACAGAAACCTTTGAGGTAAGCAAGGGAAGGATTGTTAGTCCCGACTTCAGTGGACTTTaGCCTAGAGTCTTCTCTGTC | + |
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Preference number: 3 (lower is better) Translates to: HLILTETFEVSKGRIVSPDFSGL*PRVFSV Trigger: GACAGAGAAGACTCTAGGCAAAAGTCCACTGAAGTC...GGGACTAACAATCCTTCCCTTGCTTACCTCAAAGGTTTCTGTCAAAATTAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| CDS-3UTR TCA 90 bp | TTAGAGCCCTCCAAACAGACCAGCTGGAGCACACAGTACCAGAGATGGGCTGTTACTTCCTCACACAGGTaGACCTGCGGCCACCTCGCT | + |
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Preference number: 4 (lower is better) Translates to: LEPSKQTSWSTQYQRWAVTSSHR*TCGHLA Trigger: AGCGAGGTGGCCGCAGGTTCACCTGTGTGAGGAAGT...AACAGCCCATCTCTGGTACTGTGTGCTCCAGCTGGTCTGTTTGGAGGGCTCTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| CDS-3UTR TCA 90 bp | GTCTTAGAGCCCTCCAAACAGACCAGCTGGAGCACACAGTACCAGAGATGGGCTCCCAGGAGTTCTTGGTaGGGCCACGCCCATAGAAAG | + |
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Preference number: 4 (lower is better) Translates to: VLEPSKQTSWSTQYQRWAPRSSW*GHAHRK Trigger: CTTTCTATGGGCGTGGCCTCACCAAGAACTCCTGGG...AGCCCATCTCTGGTACTGTGTGCTCCAGCTGGTCTGTTTGGAGGGCTCTAAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| CDS-3UTR CCA 90 bp | TGTCCCCTGGCTCTTGAGATACCCAGTCCTGTAAGAGTCTTGAAGCCAGGACAACAGGGTGGTAGAGCCTaGCGTGCTGTATCTGCACTC | + |
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Preference number: 4 (lower is better) Translates to: CPLALEIPSPVRVLKPGQQGGRA*RAVSAL Trigger: GAGTGCAGATACAGCACGCCAGGCTCTACCACCCTG...TTGTCCTGGCTTCAAGACTCTTACAGGACTGGGTATCTCAAGAGCCAGGGGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| CDS-3UTR CCA 90 bp | GGAAAGGATGGGCACAGAAAACAACCACATGGATGCACACCCCCACCTCCCTCCACTATCACCAGCTCCTaGGTCTCTGAGATGCCAAAC | + |
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Preference number: 4 (lower is better) Translates to: GKDGHRKQPHGCTPPPPSTITSS*VSEMPN Trigger: GTTTGGCATCTCAGAGACCCAGGAGCTGGTGATAGT...GGAGGGAGGTGGGGGTGTGCATCCATGTGGTTGTTTTCTGTGCCCATCCTTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| CDS-3UTR TCA 90 bp | AGGATGGGCACAGAAAACAACCACATGGATGCACACCCCCACCTCCCTCCAGTGAAAGTGACCAAAACATaGATGGGCCATGAGCCCATG | + |
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Preference number: 4 (lower is better) Translates to: RMGTENNHMDAHPHLPPVKVTKT*MGHEPM Trigger: CATGGGCTCATGGCCCATTCATGTTTTGGTCACTTT...CACTGGAGGGAGGTGGGGGTGTGCATCCATGTGGTTGTTTTCTGTGCCCATCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| CDS-3UTR CCA 90 bp | GTCTTAGAGCCCTCCAAACAGACCAGCTGGAGCACACAGTACCAGAGATGGGCTAGAGTGTGTGGTATTTaGCCACAATCTCCTCGCTCG | + |
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Preference number: 4 (lower is better) Translates to: VLEPSKQTSWSTQYQRWARVCGI*PQSPRS Trigger: CGAGCGAGGAGATTGTGGCCAAATACCACACACTCT...AGCCCATCTCTGGTACTGTGTGCTCCAGCTGGTCTGTTTGGAGGGCTCTAAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| CDS-3UTR TCA 90 bp | GAGCCCTCCAAACAGACCAGCTGGAGCACACAGTACCAGAGATGGGCTGTTTATCAAAGCCCCCAGGAGTaGAAATGTGCTGGTCATAGA | + |
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Preference number: 4 (lower is better) Translates to: EPSKQTSWSTQYQRWAVYQSPQE*KCAGHR Trigger: TCTATGACCAGCACATTTTCACTCCTGGGGGCTTTG...ATAAACAGCCCATCTCTGGTACTGTGTGCTCCAGCTGGTCTGTTTGGAGGGCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| CDS-3UTR GCA 90 bp | CTGGCTCTTGAGATACCCAGTCCTGTAAGAGTCTTGAAGCCAGGACAATGGCAGGTGCGCACAAAGCCTTaGCGCTTCTTCAAGAACAGG | + |
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Preference number: 4 (lower is better) Translates to: LALEIPSPVRVLKPGQWQVRTKP*RFFKNR Trigger: CCTGTTCTTGAAGAAGCGGCAAGGCTTTGTGCGCAC...CTGCCATTGTCCTGGCTTCAAGACTCTTACAGGACTGGGTATCTCAAGAGCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| CDS-3UTR CCA 90 bp | GGAAAGGATGGGCACAGAAAACAACCACATGGATGCACACCCCCACCTCCCTCCAGCCTGTTGTGTCAGTaGCAAAGTGACCAAAACATG | + |
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Preference number: 4 (lower is better) Translates to: GKDGHRKQPHGCTPPPPSSLLCQ*QSDQNM Trigger: CATGTTTTGGTCACTTTGCCACTGACACAACAGGCT...GGAGGGAGGTGGGGGTGTGCATCCATGTGGTTGTTTTCTGTGCCCATCCTTTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| CDS-3UTR CCA 90 bp | GAGCCCTCCAAACAGACCAGCTGGAGCACACAGTACCAGAGATGGGCTGTTTATAGAGTGTGTGGTATTTaGCCACAATCTCCTCGCTCG | + |
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Preference number: 4 (lower is better) Translates to: EPSKQTSWSTQYQRWAVYRVCGI*PQSPRS Trigger: CGAGCGAGGAGATTGTGGCCAAATACCACACACTCT...ATAAACAGCCCATCTCTGGTACTGTGTGCTCCAGCTGGTCTGTTTGGAGGGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| CDS-3UTR CCA 90 bp | GTCTTAGAGCCCTCCAAACAGACCAGCTGGAGCACACAGTACCAGAGATGGGCTCTTCACCATCTTGAGTaGGAAGTAGTCGCTATAGTG | + |
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Preference number: 4 (lower is better) Translates to: VLEPSKQTSWSTQYQRWALHHLE*EVVAIV Trigger: CACTATAGCGACTACTTCCCACTCAAGATGGTGAAG...AGCCCATCTCTGGTACTGTGTGCTCCAGCTGGTCTGTTTGGAGGGCTCTAAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| CDS-3UTR CCA 90 bp | ACAGTACCAGAGATGGGCTGTTTATTCCACCTACAGGTTTCCTTGCTGCTAATGCAGGGTGGTAGAGCCTaGCGTGCTGTATCTGCACTC | + |
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Preference number: 4 (lower is better) Translates to: TVPEMGCLFHLQVSLLLMQGGRA*RAVSAL Trigger: GAGTGCAGATACAGCACGCCAGGCTCTACCACCCTG...CATTAGCAGCAAGGAAACCTGTAGGTGGAATAAACAGCCCATCTCTGGTACTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| CDS-3UTR CCA 90 bp | GTCTTAGAGCCCTCCAAACAGACCAGCTGGAGCACACAGTACCAGAGATGGGCTTCGGATTCTCAATCTTaGGCAATGGTAGAGGTTCTC | + |
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Preference number: 4 (lower is better) Translates to: VLEPSKQTSWSTQYQRWASDSQS*AMVEVL Trigger: GAGAACCTCTACCATTGCCCAAGATTGAGAATCCGA...AGCCCATCTCTGGTACTGTGTGCTCCAGCTGGTCTGTTTGGAGGGCTCTAAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| 3UTR CAA 72 bp | CCCCTGGCTCTTGAGATACCCAGTCCTGTAAGAGTCTaGAAGCCAGGACAATGGCAGACACACAAGGTCTTA | + |
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Preference number: 4 (lower is better) Translates to: PLALEIPSPVRV*KPGQWQTHKVL Trigger: TAAGACCTTGTGTGTCTGCCATTGTCCTGGCTTCAAGACTCTTACAGGACTGGGTATCTCAAGAGCCAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| CDS-3UTR TCA 90 bp | AGCTGGAGCACACAGTACCAGAGATGGGCTGTTTATTCCACCTACAGGTTTCCTCAAAGCCCCCAGGAGTaGAAATGTGCTGGTCATAGA | + |
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Preference number: 4 (lower is better) Translates to: SWSTQYQRWAVYSTYRFPQSPQE*KCAGHR Trigger: TCTATGACCAGCACATTTTCACTCCTGGGGGCTTTG...AGGAAACCTGTAGGTGGAATAAACAGCCCATCTCTGGTACTGTGTGCTCCAGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| CDS-3UTR CCA 90 bp | AGCCCTCCAAACAGACCAGCTGGAGCACACAGTACCAGAGATGGGCTGTTTATTTTGCCTGTGCCCTTCTaGGTAAGCAAAAAGTCCATG | + |
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Preference number: 4 (lower is better) Translates to: SPPNRPAGAHSTRDGLFILPVPF*VSKKSM Trigger: CATGGACTTTTTGCTTACCCAGAAGGGCACAGGCAA...AATAAACAGCCCATCTCTGGTACTGTGTGCTCCAGCTGGTCTGTTTGGAGGGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| CDS-3UTR CCA 90 bp | GCTGGAGCACACAGTACCAGAGATGGGCTGTTTATTCCACCTACAGGTTTCCTTACTATCACCAGCTCCTaGGTCTCTGAGATGCCAAAC | + |
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Preference number: 4 (lower is better) Translates to: AGAHSTRDGLFIPPTGFLTITSS*VSEMPN Trigger: GTTTGGCATCTCAGAGACCCAGGAGCTGGTGATAGT...AAGGAAACCTGTAGGTGGAATAAACAGCCCATCTCTGGTACTGTGTGCTCCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| CDS-3UTR TCA 90 bp | GGAAAGGATGGGCACAGAAAACAACCACATGGATGCACACCCCCACCTCCCTCCACATTACATAATCTCTaGGGAAAGGTACCCAGAAAA | + |
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Preference number: 4 (lower is better) Translates to: GKDGHRKQPHGCTPPPPSTLHNL*GKVPRK Trigger: TTTTCTGGGTACCTTTCCTCAGAGATTATGTAATGT...GGAGGGAGGTGGGGGTGTGCATCCATGTGGTTGTTTTCTGTGCCCATCCTTTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| CDS-3UTR CCA 90 bp | AGCCCTCCAAACAGACCAGCTGGAGCACACAGTACCAGAGATGGGCTGTTTATTTACCAGGAAAGGTCTTaGAAAAGCCTGTTGTGTCAG | + |
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Preference number: 4 (lower is better) Translates to: SPPNRPAGAHSTRDGLFIYQERS*KSLLCQ Trigger: CTGACACAACAGGCTTTTCCAAGACCTTTCCTGGTA...AATAAACAGCCCATCTCTGGTACTGTGTGCTCCAGCTGGTCTGTTTGGAGGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| CDS-3UTR CCA 90 bp | GAGATACCCAGTCCTGTAAGAGTCTTGAAGCCAGGACAATGGCAGACACACAAGTTGCCTGTGCCCTTCTaGGTAAGCAAAAAGTCCATG | + |
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Preference number: 4 (lower is better) Translates to: EIPSPVRVLKPGQWQTHKLPVPF*VSKKSM Trigger: CATGGACTTTTTGCTTACCCAGAAGGGCACAGGCAA...CTTGTGTGTCTGCCATTGTCCTGGCTTCAAGACTCTTACAGGACTGGGTATCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| CDS-3UTR TCA 90 bp | ACAGTACCAGAGATGGGCTGTTTATTCCACCTACAGGTTTCCTTGCTGCTAATGGTGTCAGTGGCAAAGTaGCCAAAACATGAATGGGCC | + |
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Preference number: 4 (lower is better) Translates to: TVPEMGCLFHLQVSLLLMVSVAK*PKHEWA Trigger: GGCCCATTCATGTTTTGGTCACTTTGCCACTGACAC...CATTAGCAGCAAGGAAACCTGTAGGTGGAATAAACAGCCCATCTCTGGTACTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| CDS-3UTR TCA 90 bp | GTCTTAGAGCCCTCCAAACAGACCAGCTGGAGCACACAGTACCAGAGATGGGCTACATTACATAATCTCTaGGGAAAGGTACCCAGAAAA | + |
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Preference number: 4 (lower is better) Translates to: VLEPSKQTSWSTQYQRWATLHNL*GKVPRK Trigger: TTTTCTGGGTACCTTTCCTCAGAGATTATGTAATGT...AGCCCATCTCTGGTACTGTGTGCTCCAGCTGGTCTGTTTGGAGGGCTCTAAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| CDS-3UTR CCA 90 bp | GGTAACCTTGCCCTGTTGTCATCAGTTCCACACCATCCAGTCAAGGGAATGTCTAGCCTGTTGTGTCAGTaGCAAAGTGACCAAAACATG | + |
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Preference number: 4 (lower is better) Translates to: GNLALLSSVPHHPVKGMSSLLCQ*QSDQNM Trigger: CATGTTTTGGTCACTTTGCCACTGACACAACAGGCT...AGACATTCCCTTGACTGGATGGTGTGGAACTGATGACAACAGGGCAAGGTTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| CDS-3UTR CCA 90 bp | GGTAACCTTGCCCTGTTGTCATCAGTTCCACACCATCCAGTCAAGGGAATGTCTATGTGTACCATCTTCTaGAACCACTTCTGGAAGCGA | + |
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Preference number: 4 (lower is better) Translates to: GNLALLSSVPHHPVKGMSMCTIF*NHFWKR Trigger: TCGCTTCCAGAAGTGGTTCCAGAAGATGGTACACAT...AGACATTCCCTTGACTGGATGGTGTGGAACTGATGACAACAGGGCAAGGTTACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| CDS-3UTR GCA 90 bp | TGTCCCCTGGCTCTTGAGATACCCAGTCCTGTAAGAGTCTTGAAGCCAGGACAAAGACAAGGATGTAGTTaGGGTCAGGTGAAATATCTT | + |
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Preference number: 4 (lower is better) Translates to: CPLALEIPSPVRVLKPGQRQGCS*GQVKYL Trigger: AAGATATTTCACCTGACCGCAACTACATCCTTGTCT...TTGTCCTGGCTTCAAGACTCTTACAGGACTGGGTATCTCAAGAGCCAGGGGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| CDS-3UTR GCA 90 bp | GATGGGCTGTTTATTCCACCTACAGGTTTCCTTGCTGCTAATGCTTTCATGAAAGTGCGCACAAAGCCTTaGCGCTTCTTCAAGAACAGG | + |
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Preference number: 4 (lower is better) Translates to: DGLFIPPTGFLAANAFMKVRTKP*RFFKNR Trigger: CCTGTTCTTGAAGAAGCGGCAAGGCTTTGTGCGCAC...TTTCATGAAAGCATTAGCAGCAAGGAAACCTGTAGGTGGAATAAACAGCCCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| CDS-3UTR CCA 90 bp | AGCCCTCCAAACAGACCAGCTGGAGCACACAGTACCAGAGATGGGCTGTTTATTCTGAGATGCCAAACTTaGTCTTATGCTGATCAAACA | + |
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Preference number: 4 (lower is better) Translates to: SPPNRPAGAHSTRDGLFILRCQT*SYADQT Trigger: TGTTTGATCAGCATAAGACCAAGTTTGGCATCTCAG...AATAAACAGCCCATCTCTGGTACTGTGTGCTCCAGCTGGTCTGTTTGGAGGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| CDS-3UTR TCA 90 bp | TGCTTTCATGAAAGTCCAATGACTTCAGTGGACTTTTGCCTAGAGTCTTCTCTGAAAGTGACCAAAACATaGATGGGCCATGAGCCCATG | + |
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Preference number: 4 (lower is better) Translates to: CFHESPMTSVDFCLESSLKVTKT*MGHEPM Trigger: CATGGGCTCATGGCCCATTCATGTTTTGGTCACTTT...CAGAGAAGACTCTAGGCAAAAGTCCACTGAAGTCATTGGACTTTCATGAAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| CDS-3UTR GCA 90 bp | TGCTTTCATGAAAGTCCAATGACTTCAGTGGACTTTTGCCTAGAGTCTTCTCTGCCTGGGTCTCTGAGATaGCAAACTTGGTCTTATGCT | + |
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Preference number: 4 (lower is better) Translates to: CFHESPMTSVDFCLESSLPGSLR*QTWSYA Trigger: AGCATAAGACCAAGTTTGGCATCTCAGAGACCCAGG...CAGAGAAGACTCTAGGCAAAAGTCCACTGAAGTCATTGGACTTTCATGAAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| CDS-3UTR TCA 90 bp | CATTTAATTTTGACAGAAACCTTTGAGGTAAGCAAGGGAAGGATTGTTAGTCCCGTGTCAGTGGCAAAGTaGCCAAAACATGAATGGGCC | + |
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Preference number: 4 (lower is better) Translates to: HLILTETFEVSKGRIVSPVSVAK*PKHEWA Trigger: GGCCCATTCATGTTTTGGTCACTTTGCCACTGACAC...GGGACTAACAATCCTTCCCTTGCTTACCTCAAAGGTTTCTGTCAAAATTAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| CDS-3UTR GCA 90 bp | ACAGTACCAGAGATGGGCTGTTTATTCCACCTACAGGTTTCCTTGCTGCTAATGAGACAAGGATGTAGTTaGGGTCAGGTGAAATATCTT | + |
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Preference number: 4 (lower is better) Translates to: TVPEMGCLFHLQVSLLLMRQGCS*GQVKYL Trigger: AAGATATTTCACCTGACCGCAACTACATCCTTGTCT...CATTAGCAGCAAGGAAACCTGTAGGTGGAATAAACAGCCCATCTCTGGTACTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| CDS-3UTR CCA 90 bp | GATGGGCTGTTTATTCCACCTACAGGTTTCCTTGCTGCTAATGCTTTCATGAAAATGTGTACCATCTTCTaGAACCACTTCTGGAAGCGA | + |
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Preference number: 4 (lower is better) Translates to: DGLFIPPTGFLAANAFMKMCTIF*NHFWKR Trigger: TCGCTTCCAGAAGTGGTTCCAGAAGATGGTACACAT...TTTCATGAAAGCATTAGCAGCAAGGAAACCTGTAGGTGGAATAAACAGCCCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| CDS-3UTR CCA 90 bp | TGCTTTCATGAAAGTCCAATGACTTCAGTGGACTTTTGCCTAGAGTCTTCTCTGTCGGATTCTCAATCTTaGGCAATGGTAGAGGTTCTC | + |
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Preference number: 4 (lower is better) Translates to: CFHESPMTSVDFCLESSLSDSQS*AMVEVL Trigger: GAGAACCTCTACCATTGCCCAAGATTGAGAATCCGA...CAGAGAAGACTCTAGGCAAAAGTCCACTGAAGTCATTGGACTTTCATGAAAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| CDS-3UTR CCA 90 bp | CATTTAATTTTGACAGAAACCTTTGAGGTAAGCAAGGGAAGGATTGTTAGTCCCCTTCACCATCTTGAGTaGGAAGTAGTCGCTATAGTG | + |
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Preference number: 4 (lower is better) Translates to: HLILTETFEVSKGRIVSPLHHLE*EVVAIV Trigger: CACTATAGCGACTACTTCCCACTCAAGATGGTGAAG...GGGACTAACAATCCTTCCCTTGCTTACCTCAAAGGTTTCTGTCAAAATTAAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| CDS CCA 90 bp | GCCAGGCCACCAACCACCACCACAAGCATGTTGCCTGTGCCCTTCTaGGTAAGCAAAAAGTCCATGGAGGATCTACTCACAGAGCACGAC | + |
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Preference number: 5 (lower is better) Translates to: ARPPTTTTSMLPVPF*VSKKSMEDLLTEHD Trigger: GTCGTGCTCTGTGAGTAGATCCTCCATGGACTTTTTGCTTACCCAGAAGGGCACAGGCAACATGCTTGTGGTGGTGGTTGGTGGCCTGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| CDS TCA 90 bp | TGGTTACTGGCTGAGAATAGGGCAGAAGGCCCCAGGAGTTCTTGGTaGGGCCACGCCCATAGAAAGCACAGGGGTAGATGTGTACCATCT | + |
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Preference number: 5 (lower is better) Translates to: WLLAENRAEGPRSSW*GHAHRKHRGRCVPS Trigger: AGATGGTACACATCTACCCCTGTGCTTTCTATGGGCGTGGCCTCACCAAGAACTCCTGGGGCCTTCTGCCCTATTCTCAGCCAGTAACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| CDS-3UTR CAA 90 bp | GAGCCCTCCAAACAGACCAGCTGGAGCACACAGTACCAGAGATGGGCTGTTTATCACTTCTGGAAGCGATaGACAAAGCCCCCAGGAGTG | + |
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Preference number: 5 (lower is better) Translates to: EPSKQTSWSTQYQRWAVYHFWKR*TKPPGV Trigger: CACTCCTGGGGGCTTTGTCAATCGCTTCCAGAAGTG...ATAAACAGCCCATCTCTGGTACTGTGTGCTCCAGCTGGTCTGTTTGGAGGGCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| CDS-3UTR CAA 90 bp | AGGATGGGCACAGAAAACAACCACATGGATGCACACCCCCACCTCCCTCCAGTGATACCAGGAAAGGTCTaGGAAAAGCCTGTTGTGTCA | + |
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Preference number: 5 (lower is better) Translates to: RMGTENNHMDAHPHLPPVIPGKV*EKPVVS Trigger: TGACACAACAGGCTTTTCCAAGACCTTTCCTGGTAT...CACTGGAGGGAGGTGGGGGTGTGCATCCATGTGGTTGTTTTCTGTGCCCATCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| CDS-3UTR CAA 90 bp | CTGGCTCTTGAGATACCCAGTCCTGTAAGAGTCTTGAAGCCAGGACAATGGCAGTGTGCGCACAAAGCCTaGCCGCTTCTTCAAGAACAG | + |
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Preference number: 5 (lower is better) Translates to: LALEIPSPVRVLKPGQWQCAHKA*PLLQEQ Trigger: CTGTTCTTGAAGAAGCGGCAAGGCTTTGTGCGCACA...CTGCCATTGTCCTGGCTTCAAGACTCTTACAGGACTGGGTATCTCAAGAGCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| CDS-3UTR CAA 90 bp | GAGATACCCAGTCCTGTAAGAGTCTTGAAGCCAGGACAATGGCAGACACACAAGCACTTCTGGAAGCGATaGACAAAGCCCCCAGGAGTG | + |
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Preference number: 5 (lower is better) Translates to: EIPSPVRVLKPGQWQTHKHFWKR*TKPPGV Trigger: CACTCCTGGGGGCTTTGTCAATCGCTTCCAGAAGTG...CTTGTGTGTCTGCCATTGTCCTGGCTTCAAGACTCTTACAGGACTGGGTATCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| CDS-3UTR CAA 90 bp | GAGCCCTCCAAACAGACCAGCTGGAGCACACAGTACCAGAGATGGGCTGTTTATTCTTGGAAAAGCCTGTaGTGTCAGTGGCAAAGTGAC | + |
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Preference number: 5 (lower is better) Translates to: EPSKQTSWSTQYQRWAVYSWKSL*CQWQSD Trigger: GTCACTTTGCCACTGACACAACAGGCTTTTCCAAGA...ATAAACAGCCCATCTCTGGTACTGTGTGCTCCAGCTGGTCTGTTTGGAGGGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| CDS-3UTR CAA 90 bp | GTCTTAGAGCCCTCCAAACAGACCAGCTGGAGCACACAGTACCAGAGATGGGCTATACCAGGAAAGGTCTaGGAAAAGCCTGTTGTGTCA | + |
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Preference number: 5 (lower is better) Translates to: VLEPSKQTSWSTQYQRWAIPGKV*EKPVVS Trigger: TGACACAACAGGCTTTTCCAAGACCTTTCCTGGTAT...AGCCCATCTCTGGTACTGTGTGCTCCAGCTGGTCTGTTTGGAGGGCTCTAAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| CDS CCA 90 bp | GTGTGTGGTATTTGGCCACAATCTCCTCGCTCGGATTCTCAATCTTaGGCAATGGTAGAGGTTCTCCAACAACAGTGGTTACTGGCTGAG | + |
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Preference number: 5 (lower is better) Translates to: VCGIWPQSPRSDSQS*AMVEVLQQQWLLAE Trigger: CTCAGCCAGTAACCACTGTTGTTGGAGAACCTCTACCATTGCCCAAGATTGAGAATCCGAGCGAGGAGATTGTGGCCAAATACCACACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| CDS-3UTR CAA 90 bp | GATGGGCTGTTTATTCCACCTACAGGTTTCCTTGCTGCTAATGCTTTCATGAAAACCTCCATGGCGGTCTaGAGGTCCTTCTTGGTGGGC | + |
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Preference number: 5 (lower is better) Translates to: DGLFIPPTGFLAANAFMKTSMAV*RSFLVG Trigger: GCCCACCAAGAAGGACCTCAAGACCGCCATGGAGGT...TTTCATGAAAGCATTAGCAGCAAGGAAACCTGTAGGTGGAATAAACAGCCCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033567.15 |
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| CDS TCA 90 bp | GGTCTTGGAAAAGCCTGTTGTGTCAGTGGCAAAGTGACCAAAACATaGATGGGCCATGAGCCCATGAGGATGGCAGACAAGGATGTAGTT | + |
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Preference number: 5 (lower is better) Translates to: GLGKACCVSGKVTKT*MGHEPMRMADKDVV Trigger: AACTACATCCTTGTCTGCCATCCTCATGGGCTCATGGCCCATTCATGTTTTGGTCACTTTGCCACTGACACAACAGGCTTTTCCAAGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| CDS-3UTR CAA 90 bp | GAGATACCCAGTCCTGTAAGAGTCTTGAAGCCAGGACAATGGCAGACACACAAGTCTTGGAAAAGCCTGTaGTGTCAGTGGCAAAGTGAC | + |
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Preference number: 5 (lower is better) Translates to: EIPSPVRVLKPGQWQTHKSWKSL*CQWQSD Trigger: GTCACTTTGCCACTGACACAACAGGCTTTTCCAAGA...CTTGTGTGTCTGCCATTGTCCTGGCTTCAAGACTCTTACAGGACTGGGTATCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| CDS TCA 90 bp | GGATGTAGTTGCGGTCAGGTGAAATATCTTTCGTCTTCACCATCTTaGGTGGGAAGTAGTCGCTATAGTGTTTCCACAGACGCCACTTCC | + |
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Preference number: 5 (lower is better) Translates to: GCSCGQVKYLSSSPS*VGSSRYSVSTDATS Trigger: GGAAGTGGCGTCTGTGGAAACACTATAGCGACTACTTCCCACTCAAGATGGTGAAGACGAAAGATATTTCACCTGACCGCAACTACATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| CDS-3UTR CAA 90 bp | TGCTTTCATGAAAGTCCAATGACTTCAGTGGACTTTTGCCTAGAGTCTTCTCTGTGTGCGCACAAAGCCTaGCCGCTTCTTCAAGAACAG | + |
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Preference number: 5 (lower is better) Translates to: CFHESPMTSVDFCLESSLCAHKA*PLLQEQ Trigger: CTGTTCTTGAAGAAGCGGCAAGGCTTTGTGCGCACA...CAGAGAAGACTCTAGGCAAAAGTCCACTGAAGTCATTGGACTTTCATGAAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| CDS-3UTR CAA 90 bp | GATGGGCTGTTTATTCCACCTACAGGTTTCCTTGCTGCTAATGCTTTCATGAAACTCGGATTCTCAATCTaGGGCAATGGTAGAGGTTCT | + |
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Preference number: 5 (lower is better) Translates to: DGLFIPPTGFLAANAFMKLGFSI*GNGRGS Trigger: AGAACCTCTACCATTGCCCAAGATTGAGAATCCGAG...TTTCATGAAAGCATTAGCAGCAAGGAAACCTGTAGGTGGAATAAACAGCCCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| CDS CCA 90 bp | GATCAAACAATTTTCGTAGGGCATCAATATAGAGTGTGTGGTATTTaGCCACAATCTCCTCGCTCGGATTCTCAATCTTGGGCAATGGTA | + |
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Preference number: 5 (lower is better) Translates to: DQTIFVGHQYRVCGI*PQSPRSDSQSWAMV Trigger: TACCATTGCCCAAGATTGAGAATCCGAGCGAGGAGATTGTGGCCAAATACCACACACTCTATATTGATGCCCTACGAAAATTGTTTGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| CDS-3UTR CAA 90 bp | CATTTAATTTTGACAGAAACCTTTGAGGTAAGCAAGGGAAGGATTGTTAGTCCCCTCGGATTCTCAATCTaGGGCAATGGTAGAGGTTCT | + |
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Preference number: 5 (lower is better) Translates to: HLILTETFEVSKGRIVSPLGFSI*GNGRGS Trigger: AGAACCTCTACCATTGCCCAAGATTGAGAATCCGAG...GGGACTAACAATCCTTCCCTTGCTTACCTCAAAGGTTTCTGTCAAAATTAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| CDS CCA 72 bp | GCCTTGCCGCTTCTTCAAGAACAGGGTGGTAGAGCCTaGCGTGCTGTATCTGCACTCAGCCAGGCCACCAAC | + |
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Preference number: 6 (lower is better) Translates to: ALPLLQEQGGRA*RAVSALSQATN Trigger: GTTGGTGGCCTGGCTGAGTGCAGATACAGCACGCCAGGCTCTACCACCCTGTTCTTGAAGAAGCGGCAAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| CDS TCA 72 bp | TATAGTGTTTCCACAGACGCCACTTCCTCACACAGGTaGACCTGCGGCCACCTCGCTCAGGGGTCTTCCAGT | + |
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Preference number: 6 (lower is better) Translates to: YSVSTDATSSHR*TCGHLAQGSSS Trigger: ACTGGAAGACCCCTGAGCGAGGTGGCCGCAGGTTCACCTGTGTGAGGAAGTGGCGTCTGTGGAAACACTATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| CDS TCA 72 bp | GCTGAGAATAGGGCAGAAGGCCCCAGGAGTTCTTGGTaGGGCCACGCCCATAGAAAGCACAGGGGTAGATGT | + |
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Preference number: 6 (lower is better) Translates to: AENRAEGPRSSW*GHAHRKHRGRC Trigger: ACATCTACCCCTGTGCTTTCTATGGGCGTGGCCTCACCAAGAACTCCTGGGGCCTTCTGCCCTATTCTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| CDS CCA 72 bp | ACAGTGGTGACTATAACCAAGGCACTGAGGGCCCACTaGAAAAGAGCAAAGACCTCCATGGCGGTCTTGAGG | + |
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Preference number: 6 (lower is better) Translates to: TVVTITKALRAH*KRAKTSMAVLR Trigger: CCTCAAGACCGCCATGGAGGTCTTTGCTCTTTTCCAGTGGGCCCTCAGTGCCTTGGTTATAGTCACCACTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033567.15 |
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| CDS CCA 72 bp | CCAACCACCACCACAAGCATGTTGCCTGTGCCCTTCTaGGTAAGCAAAAAGTCCATGGAGGATCTACTCACA | + |
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Preference number: 6 (lower is better) Translates to: PTTTTSMLPVPF*VSKKSMEDLLT Trigger: TGTGAGTAGATCCTCCATGGACTTTTTGCTTACCCAGAAGGGCACAGGCAACATGCTTGTGGTGGTGGTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| CDS TCA 72 bp | AAAGCCTGTTGTGTCAGTGGCAAAGTGACCAAAACATaGATGGGCCATGAGCCCATGAGGATGGCAGACAAG | + |
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Preference number: 6 (lower is better) Translates to: KACCVSGKVTKT*MGHEPMRMADK Trigger: CTTGTCTGCCATCCTCATGGGCTCATGGCCCATTCATGTTTTGGTCACTTTGCCACTGACACAACAGGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| CDS CAA 72 bp | ATGTGTACCATCTTCTGGAACCACTTCTGGAAGCGATaGACAAAGCCCCCAGGAGTGAAAATGTGCTGGTCA | + |
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Preference number: 6 (lower is better) Translates to: MCTIFWNHFWKR*TKPPGVKMCWS Trigger: TGACCAGCACATTTTCACTCCTGGGGGCTTTGTCAATCGCTTCCAGAAGTGGTTCCAGAAGATGGTACACAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| CDS CAA 72 bp | TATTTGGCCACAATCTCCTCGCTCGGATTCTCAATCTaGGGCAATGGTAGAGGTTCTCCAACAACAGTGGTT | + |
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Preference number: 6 (lower is better) Translates to: YLATISSLGFSI*GNGRGSPTTVV Trigger: AACCACTGTTGTTGGAGAACCTCTACCATTGCCCAAGATTGAGAATCCGAGCGAGGAGATTGTGGCCAAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| CDS TCA 72 bp | TGCGGTCAGGTGAAATATCTTTCGTCTTCACCATCTTaGGTGGGAAGTAGTCGCTATAGTGTTTCCACAGAC | + |
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Preference number: 6 (lower is better) Translates to: CGQVKYLSSSPS*VGSSRYSVSTD Trigger: GTCTGTGGAAACACTATAGCGACTACTTCCCACTCAAGATGGTGAAGACGAAAGATATTTCACCTGACCGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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| CDS CCA 72 bp | ATTTTCGTAGGGCATCAATATAGAGTGTGTGGTATTTaGCCACAATCTCCTCGCTCGGATTCTCAATCTTGG | + |
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Preference number: 6 (lower is better) Translates to: IFVGHQYRVCGI*PQSPRSDSQSW Trigger: CCAAGATTGAGAATCCGAGCGAGGAGATTGTGGCCAAATACCACACACTCTATATTGATGCCCTACGAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033567.15 ENSMUST00000147103.2 |
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