Pregenerated sensors for AVPR2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031390Ensembl transcript IDs: ENSMUST00000033765.8, ENSMUST00000101470.3, ENSMUST00000114395.2
Found 135 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCAACCTCCCATCCCCAGGGTCCAGATTCAACTCGCAAGCCAGTCTaGGGCAGCTTACCTCCAGCAGCCACCACCAAGCCCACCATTCCA | + |
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Preference number: 1 (lower is better) Translates to: STSHPQGPDSTRKPV*GSLPPAATTKPTIP Trigger: TGGAATGGTGGGCTTGGTGGTGGCTGCTGGAGGTAAGCTGCCTCAGACTGGCTTGCGAGTTGAATCTGGACCCTGGGGATGGGAGGTTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101470.3 |
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| 3UTR GCA 90 bp | TCCTATCCTGGTCCTTCTTCCAGCTCCCTGGGAGTCTTCCTCACCTaGAGAGTACTTGCCAGAATGGGAAGCCCAAGTGCCTCTGTTGCC | + |
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Preference number: 1 (lower is better) Translates to: SYPGPSSSSLGVFLT*RVLARMGSPSASVA Trigger: GGCAACAGAGGCACTTGGGCTTCCCATTCTGGCAAGTACTCTGCAGGTGAGGAAGACTCCCAGGGAGCTGGAAGAAGGACCAGGATAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 ENSMUST00000114395.2 |
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| 3UTR TCA 90 bp | ATGGGAAGCCCAAGTGCCTCTGTTGCCTATTCTCCTCCTAGACCTTaGGGCATCTGTCCCAGTTGCTTCCCATGTCTGGCAACAAAGGAG | + |
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Preference number: 1 (lower is better) Translates to: MGSPSASVAYSPPRP*GICPSCFPCLATKE Trigger: CTCCTTTGTTGCCAGACATGGGAAGCAACTGGGACAGATGCCTCAAGGTCTAGGAGGAGAATAGGCAACAGAGGCACTTGGGCTTCCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 ENSMUST00000114395.2 |
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| 3UTR CCA 90 bp | CAGATGCCAAGACAGAAGGTTGACATGGAGCTGTTTATTTTCACCTaGGGACCTGCTCTCAAAAATACAGTCTTGGTTGCTTATATCACA | + |
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Preference number: 1 (lower is better) Translates to: QMPRQKVDMELFIFT*GPALKNTVLVAYIT Trigger: TGTGATATAAGCAACCAAGACTGTATTTTTGAGAGCAGGTCCCCAGGTGAAAATAAACAGCTCCATGTCAACCTTCTGTCTTGGCATCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101470.3 |
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| 3UTR CAA 90 bp | GTCCTTCTTCCAGCTCCCTGGGAGTCTTCCTCACCTGCAGAGTACTaGCCAGAATGGGAAGCCCAAGTGCCTCTGTTGCCTATTCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: VLLPAPWESSSPAEY*PEWEAQVPLLPILL Trigger: GAGGAGAATAGGCAACAGAGGCACTTGGGCTTCCCATTCTGGCAAGTACTCTGCAGGTGAGGAAGACTCCCAGGGAGCTGGAAGAAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 ENSMUST00000114395.2 |
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| 3UTR-3UTR TCA 90 bp | GAGTCTTCCTCACCTGCAGAGTACTTGCCAGAATGGGAAGCCCAAGTGCCTCTGTCTCCTCCTAGACCTTaGGGCATCTGTCCCAGTTGC | + |
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Preference number: 2 (lower is better) Translates to: ESSSPAEYLPEWEAQVPLSPPRP*GICPSC Trigger: GCAACTGGGACAGATGCCTCAAGGTCTAGGAGGAGA...CAGAGGCACTTGGGCTTCCCATTCTGGCAAGTACTCTGCAGGTGAGGAAGACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 ENSMUST00000114395.2 |
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| 3UTR CAA 90 bp | TACCTCCAGCAGCCACCACCAAGCCCACCATTCCACATAGGCCTATaGCTTCACCTCAGCCCTCTTCTAGGTCTCTTGGGAGGTAGCAAA | + |
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Preference number: 2 (lower is better) Translates to: YLQQPPPSPPFHIGL*LHLSPLLGLLGGSK Trigger: TTTGCTACCTCCCAAGAGACCTAGAAGAGGGCTGAGGTGAAGCAATAGGCCTATGTGGAATGGTGGGCTTGGTGGTGGCTGCTGGAGGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101470.3 |
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| 3UTR-3UTR TCA 90 bp | AGTCTTCCTCACCTGCAGAGTACTTGCCAGAATGGGAAGCCCAAGTGCCTCTGTTCTCCTCCTAGACCTTaGGGCATCTGTCCCAGTTGC | + |
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Preference number: 2 (lower is better) Translates to: SLPHLQSTCQNGKPKCLCSPPRP*GICPSC Trigger: GCAACTGGGACAGATGCCTCAAGGTCTAGGAGGAGA...ACAGAGGCACTTGGGCTTCCCATTCTGGCAAGTACTCTGCAGGTGAGGAAGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 ENSMUST00000114395.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGCAGCCACCACCAAGCCCACCATTCCACATAGGCCTATTGCTTCACCTCAGAGACAGAGGGAGGAATaGCAGGAAGGTCTATTGGTC | + |
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Preference number: 2 (lower is better) Translates to: PAATTKPTIPHRPIASPQRQREE*QEGLLV Trigger: GACCAATAGACCTTCCTGTCATTCCTCCCTCTGTCT...CTGAGGTGAAGCAATAGGCCTATGTGGAATGGTGGGCTTGGTGGTGGCTGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101470.3 |
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| 3UTR-3UTR GCA 90 bp | CTCCCAGAGCCTGCACTGCTAGAGACCAGATGCCAAGACAGAAGGTTGACATGGCACCTGCAGAGTACTTaGCAGAATGGGAAGCCCAAG | + |
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Preference number: 2 (lower is better) Translates to: LPEPALLETRCQDRRLTWHLQST*QNGKPK Trigger: CTTGGGCTTCCCATTCTGGCAAGTACTCTGCAGGTG...CCATGTCAACCTTCTGTCTTGGCATCTGGTCTCTAGCAGTGCAGGCTCTGGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101470.3 |
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| 3UTR-3UTR GCA 90 bp | CCTCCCATCCCCAGGGTCCAGATTCAACTCGCAAGCCAGTCTGAGGCAGCTTACGATGAGCTCCTCTTATaGCTTTGCTTGGAAGCCTTG | + |
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Preference number: 2 (lower is better) Translates to: PPIPRVQIQLASQSEAAYDELLL*LCLEAL Trigger: CAAGGCTTCCAAGCAAAGGCATAAGAGGAGCTCATC...GTAAGCTGCCTCAGACTGGCTTGCGAGTTGAATCTGGACCCTGGGGATGGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101470.3 |
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| 3UTR-3UTR TCA 90 bp | TTGCTTCACCTCAGCCCTCTTCTAGGTCTCTTGGGAGGTAGCAAAGGAAGGAAGTCTCCTCCTAGACCTTaGGGCATCTGTCCCAGTTGC | + |
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Preference number: 2 (lower is better) Translates to: LLHLSPLLGLLGGSKGRKSPPRP*GICPSC Trigger: GCAACTGGGACAGATGCCTCAAGGTCTAGGAGGAGA...CTTCCTTCCTTTGCTACCTCCCAAGAGACCTAGAAGAGGGCTGAGGTGAAGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101470.3 |
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| 3UTR-3UTR GCA 90 bp | GAGATTGGCAGAAACTCACTGGGCACTCTCTGTTTTTCCTTTCTGCTAGGCTGTGCTCTTGGGAAAGACTaGTGTCCGCCAGGGCCATGG | + |
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Preference number: 2 (lower is better) Translates to: EIGRNSLGTLCFSFLLGCALGKD*CPPGPW Trigger: CCATGGCCCTGGCGGACAGCAGTCTTTCCCAAGAGC...ACAGCCTAGCAGAAAGGAAAAACAGAGAGTGCCCAGTGAGTTTCTGCCAATCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101470.3 |
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| 3UTR-3UTR CCA 90 bp | CCACCAAGCCCACCATTCCACATAGGCCTATTGCTTCACCTCAGCCCTCTTCTATCTTATGCCTTTGCTTaGAAGCCTTGGGCTGTGGCT | + |
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Preference number: 2 (lower is better) Translates to: PPSPPFHIGLLLHLSPLLSYAFA*KPWAVA Trigger: AGCCACAGCCCAAGGCTTCCAAGCAAAGGCATAAGA...TAGAAGAGGGCTGAGGTGAAGCAATAGGCCTATGTGGAATGGTGGGCTTGGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101470.3 |
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| 3UTR CAA 90 bp | TTCCACATAGGCCTATTGCTTCACCTCAGCCCTCTTCTAGGTCTCTaGGGAGGTAGCAAAGGAAGGAAGCTGGAGATGAGCTCCTCTTAT | + |
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Preference number: 2 (lower is better) Translates to: FHIGLLLHLSPLLGL*GGSKGRKLEMSSSY Trigger: ATAAGAGGAGCTCATCTCCAGCTTCCTTCCTTTGCTACCTCCCAAGAGACCTAGAAGAGGGCTGAGGTGAAGCAATAGGCCTATGTGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101470.3 |
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| 3UTR CAA 90 bp | CTCCCAGGGCCAACCCTAGATAGTCAGCTAAGCTACAATGGGTTTTaGAATAGAAAGAGCCCAGTAGCTACTCAGGAGGGTGTATCCTTC | + |
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Preference number: 2 (lower is better) Translates to: LPGPTLDSQLSYNGF*NRKSPVATQEGVSF Trigger: GAAGGATACACCCTCCTGAGTAGCTACTGGGCTCTTTCTATTCAAAAACCCATTGTAGCTTAGCTGACTATCTAGGGTTGGCCCTGGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101470.3 |
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| 3UTR-3UTR GCA 90 bp | GAGATTGGCAGAAACTCACTGGGCACTCTCTGTTTTTCCTTTCTGCTAGGCTGTACCCCATGTGCTGGTTaGTGTTGTAATAGCCTGTGC | + |
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Preference number: 2 (lower is better) Translates to: EIGRNSLGTLCFSFLLGCTPCAG*CCNSLC Trigger: GCACAGGCTATTACAACAGCAACCAGCACATGGGGT...ACAGCCTAGCAGAAAGGAAAAACAGAGAGTGCCCAGTGAGTTTCTGCCAATCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101470.3 |
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| 3UTR-3UTR CCA 90 bp | CAAAGCTGCCCCCACCCTCCAGAACAAGACCAAGAAGTTACTATCCCACAAGTATCCTTCTTGTATACCTaGGGACAATGTCACCTAGGG | + |
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Preference number: 2 (lower is better) Translates to: QSCPHPPEQDQEVTIPQVSFLYT*GQCHLG Trigger: CCCTAGGTGACATTGTCCCCAGGTATACAAGAAGGA...TACTTGTGGGATAGTAACTTCTTGGTCTTGTTCTGGAGGGTGGGGGCAGCTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101470.3 |
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| 3UTR-3UTR CCA 90 bp | CACCTCAGCCCTCTTCTAGGTCTCTTGGGAGGTAGCAAAGGAAGGAAGCTGGAGGACAGAAGGTTGACATaGAGCTGTTTATTTTCACCT | + |
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Preference number: 2 (lower is better) Translates to: HLSPLLGLLGGSKGRKLEDRRLT*SCLFSP Trigger: AGGTGAAAATAAACAGCTCCATGTCAACCTTCTGTC...CTCCAGCTTCCTTCCTTTGCTACCTCCCAAGAGACCTAGAAGAGGGCTGAGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101470.3 |
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| 3UTR-3UTR TCA 90 bp | AGCTGCCCCCACCCTCCAGAACAAGACCAAGAAGTTACTATCCCACAAGTAACACTGTGGCACAGAACATaGATTCTGTGTTTAAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: SCPHPPEQDQEVTIPQVTLWHRT*ILCLRS Trigger: GCTCCTTAAACACAGAATTCATGTTCTGTGCCACAG...TGTTACTTGTGGGATAGTAACTTCTTGGTCTTGTTCTGGAGGGTGGGGGCAGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101470.3 |
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| 3UTR-3UTR CCA 90 bp | CCTGGGGACCTGCTCTCAAAAATACAGTCTTGGTTGCTTATATCACAGATTCCTCTATTGGTCCTATCCTaGTCCTTCTTCCAGCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: PGDLLSKIQSWLLISQIPLLVLS*SFFQLP Trigger: AGGGAGCTGGAAGAAGGACCAGGATAGGACCAATAG...AGGAATCTGTGATATAAGCAACCAAGACTGTATTTTTGAGAGCAGGTCCCCAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 |
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| 3UTR-3UTR TCA 90 bp | TGCTCTCAAAAATACAGTCTTGGTTGCTTATATCACAGATTCCTGAACATAGGTAGACAGAGGGAGGAATaGCAGGAAGGTCTATTGGTC | + |
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Preference number: 2 (lower is better) Translates to: CSQKYSLGCLYHRFLNIGRQREE*QEGLLV Trigger: GACCAATAGACCTTCCTGTCATTCCTCCCTCTGTCT...ACCTATGTTCAGGAATCTGTGATATAAGCAACCAAGACTGTATTTTTGAGAGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 |
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| 3UTR TCA 72 bp | CATCCCCAGGGTCCAGATTCAACTCGCAAGCCAGTCTaGGGCAGCTTACCTCCAGCAGCCACCACCAAGCCC | + |
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Preference number: 3 (lower is better) Translates to: HPQGPDSTRKPV*GSLPPAATTKP Trigger: GGGCTTGGTGGTGGCTGCTGGAGGTAAGCTGCCTCAGACTGGCTTGCGAGTTGAATCTGGACCCTGGGGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101470.3 |
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| 3UTR CCA 72 bp | GGAGCTCTTGGGAAAGACTGCTGTCCGCCAGGGCCATaGGTTAGCATCTACAGCCTCCCCGAGTCTAGGAAC | + |
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Preference number: 3 (lower is better) Translates to: GALGKDCCPPGP*VSIYSLPESRN Trigger: GTTCCTAGACTCGGGGAGGCTGTAGATGCTAACCCATGGCCCTGGCGGACAGCAGTCTTTCCCAAGAGCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101470.3 |
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| 3UTR-3UTR CAA 90 bp | GGTCCTATCCTGGTCCTTCTTCCAGCTCCCTGGGAGTCTTCCTCACCTGCAGAGGCCCAAGTGCCTCTGTaGCCTATTCTCCTCCTAGAC | + |
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Preference number: 3 (lower is better) Translates to: GPILVLLPAPWESSSPAEAQVPL*PILLLD Trigger: GTCTAGGAGGAGAATAGGCAACAGAGGCACTTGGGC...CTCTGCAGGTGAGGAAGACTCCCAGGGAGCTGGAAGAAGGACCAGGATAGGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 ENSMUST00000114395.2 |
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| 3UTR GCA 72 bp | GGTCCTTCTTCCAGCTCCCTGGGAGTCTTCCTCACCTaGAGAGTACTTGCCAGAATGGGAAGCCCAAGTGCC | + |
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Preference number: 3 (lower is better) Translates to: GPSSSSLGVFLT*RVLARMGSPSA Trigger: GGCACTTGGGCTTCCCATTCTGGCAAGTACTCTGCAGGTGAGGAAGACTCCCAGGGAGCTGGAAGAAGGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 ENSMUST00000114395.2 |
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| 3UTR-3UTR CAA 90 bp | CTTCCTCACCTGCAGAGTACTTGCCAGAATGGGAAGCCCAAGTGCCTCTGTTGCAGGCATCTGTCCCAGTaGCTTCCCATGTCTGGCAAC | + |
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Preference number: 3 (lower is better) Translates to: LPHLQSTCQNGKPKCLCCRHLSQ*LPMSGN Trigger: GTTGCCAGACATGGGAAGCAACTGGGACAGATGCCT...GCAACAGAGGCACTTGGGCTTCCCATTCTGGCAAGTACTCTGCAGGTGAGGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 ENSMUST00000114395.2 |
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| 3UTR TCA 72 bp | GTCTCTTGGGAGGTAGCAAAGGAAGGAAGCTGGAGATaGGCTCCTCTTATGCCTTTGCTTGGAAGCCTTGGG | + |
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Preference number: 3 (lower is better) Translates to: VSWEVAKEGSWR*APLMPLLGSLG Trigger: CCCAAGGCTTCCAAGCAAAGGCATAAGAGGAGCTCATCTCCAGCTTCCTTCCTTTGCTACCTCCCAAGAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101470.3 |
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| 3UTR CCA 72 bp | AGGCTGGTAAAAACACAGGAGCTAAAGCCTGGTAGCTaGAAGACCCAAGGGAAAACACTGACCCAGGAGTCC | + |
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Preference number: 3 (lower is better) Translates to: RLVKTQELKPGS*KTQGKTLTQES Trigger: GGACTCCTGGGTCAGTGTTTTCCCTTGGGTCTTCCAGCTACCAGGCTTTAGCTCCTGTGTTTTTACCAGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101470.3 |
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| 3UTR-3UTR CAA 90 bp | CAAAGCTGCCCCCACCCTCCAGAACAAGACCAAGAAGTTACTATCCCACAAGTAAGGCATCTGTCCCAGTaGCTTCCCATGTCTGGCAAC | + |
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Preference number: 3 (lower is better) Translates to: QSCPHPPEQDQEVTIPQVRHLSQ*LPMSGN Trigger: GTTGCCAGACATGGGAAGCAACTGGGACAGATGCCT...TACTTGTGGGATAGTAACTTCTTGGTCTTGTTCTGGAGGGTGGGGGCAGCTTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101470.3 |
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| 3UTR GCA 72 bp | AGGAAGGAAGCTGGAGATGAGCTCCTCTTATGCCTTTaGTTGGAAGCCTTGGGCTGTGGCTGTGAAATATGG | + |
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Preference number: 3 (lower is better) Translates to: RKEAGDELLLCL*LEALGCGCEIW Trigger: CCATATTTCACAGCCACAGCCCAAGGCTTCCAAGCAAAGGCATAAGAGGAGCTCATCTCCAGCTTCCTTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101470.3 |
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| 3UTR-3UTR CAA 90 bp | CTTCCTCACCTGCAGAGTACTTGCCAGAATGGGAAGCCCAAGTGCCTCTGTTGCAGCTACAATGGGTTTTaGAATAGAAAGAGCCCAGTA | + |
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Preference number: 3 (lower is better) Translates to: LPHLQSTCQNGKPKCLCCSYNGF*NRKSPV Trigger: TACTGGGCTCTTTCTATTCAAAAACCCATTGTAGCT...GCAACAGAGGCACTTGGGCTTCCCATTCTGGCAAGTACTCTGCAGGTGAGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 ENSMUST00000114395.2 |
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| 3UTR-3UTR CAA 90 bp | CTCCTAGGCCTAAGGATCCTAGGGCAGGCTGGTAAAAACACAGGAGCTAAAGCCTGCCAAGACAGAAGGTaGACATGGAGCTGTTTATTT | + |
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Preference number: 3 (lower is better) Translates to: LLGLRILGQAGKNTGAKACQDRR*TWSCLF Trigger: AAATAAACAGCTCCATGTCAACCTTCTGTCTTGGCA...GGCTTTAGCTCCTGTGTTTTTACCAGCCTGCCCTAGGATCCTTAGGCCTAGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101470.3 |
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| 3UTR-3UTR CAA 90 bp | TGGTTGCTTATATCACAGATTCCTGAACATAGGTATGTCTATGGGTGTGCGAATAGGCATCTGTCCCAGTaGCTTCCCATGTCTGGCAAC | + |
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Preference number: 3 (lower is better) Translates to: WLLISQIPEHRYVYGCANRHLSQ*LPMSGN Trigger: GTTGCCAGACATGGGAAGCAACTGGGACAGATGCCT...ATTCGCACACCCATAGACATACCTATGTTCAGGAATCTGTGATATAAGCAACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 |
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| 3UTR CCA 72 bp | GTTAAGGTTTCTTTACACCCTTCCTTCTTGTATACCTaGGGACAATGTCACCTAGGGAGGACCAAGGATAAC | + |
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Preference number: 3 (lower is better) Translates to: VKVSLHPSFLYT*GQCHLGRTKDN Trigger: GTTATCCTTGGTCCTCCCTAGGTGACATTGTCCCCAGGTATACAAGAAGGAAGGGTGTAAAGAAACCTTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 ENSMUST00000114395.2 |
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| 3UTR-3UTR CAA 90 bp | ATGGGTGTGCGAATCTTTGTATTTCAGCTTCTGTGCCCACCATATACCTGGTCCAGCTACAATGGGTTTTaGAATAGAAAGAGCCCAGTA | + |
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Preference number: 3 (lower is better) Translates to: MGVRIFVFQLLCPPYTWSSYNGF*NRKSPV Trigger: TACTGGGCTCTTTCTATTCAAAAACCCATTGTAGCT...GGACCAGGTATATGGTGGGCACAGAAGCTGAAATACAAAGATTCGCACACCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 |
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| 3UTR CCA 72 bp | AGACAGAAGGTTGACATGGAGCTGTTTATTTTCACCTaGGGACCTGCTCTCAAAAATACAGTCTTGGTTGCT | + |
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Preference number: 3 (lower is better) Translates to: RQKVDMELFIFT*GPALKNTVLVA Trigger: AGCAACCAAGACTGTATTTTTGAGAGCAGGTCCCCAGGTGAAAATAAACAGCTCCATGTCAACCTTCTGTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101470.3 |
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| CDS-3UTR CCA 90 bp | GGTCCTATCCTGGTCCTTCTTCCAGCTCCCTGGGAGTCTTCCTCACCTGCAGAGCCAGGCCACCAGCACTaGCCTGTTCCAGCGAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: GPILVLLPAPWESSSPAEPGHQH*PVPASP Trigger: GGGGCTCGCTGGAACAGGCCAGTGCTGGTGGCCTGG...CTCTGCAGGTGAGGAAGACTCCCAGGGAGCTGGAAGAAGGACCAGGATAGGACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 |
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| CDS-3UTR CCA 90 bp | TGGTCCTATCCTGGTCCTTCTTCCAGCTCCCTGGGAGTCTTCCTCACCTGCAGACCAGGCCACCAGCACTaGCCTGTTCCAGCGAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: WSYPGPSSSSLGVFLTCRPGHQH*PVPASP Trigger: GGGGCTCGCTGGAACAGGCCAGTGCTGGTGGCCTGG...TCTGCAGGTGAGGAAGACTCCCAGGGAGCTGGAAGAAGGACCAGGATAGGACCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 |
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| CDS-3UTR CCA 90 bp | GGTCCTATCCTGGTCCTTCTTCCAGCTCCCTGGGAGTCTTCCTCACCTGCAGAGCATGGGCTCCCTCGCTaGGACTTCCTGTCCGGTGTC | + |
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Preference number: 4 (lower is better) Translates to: GPILVLLPAPWESSSPAEHGLPR*DFLSGV Trigger: GACACCGGACAGGAAGTCCCAGCGAGGGAGCCCATG...CTCTGCAGGTGAGGAAGACTCCCAGGGAGCTGGAAGAAGGACCAGGATAGGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 ENSMUST00000114395.2 |
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| CDS-3UTR GCA 90 bp | GGAGGACCAAGGATAACCAAGGTACCCTTTCTTGGTACTCCCAGGGCCAACCCTTCTGCGGCGCCTCCCTaGCCTTTCAGATGGCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: GGPRITKVPFLGTPRANPSAAPP*PFRWPW Trigger: CCAGGGCCATCTGAAAGGGCAGGGAGGCGCCGCAGA...AGGGTTGGCCCTGGGAGTACCAAGAAAGGGTACCTTGGTTATCCTTGGTCCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 ENSMUST00000114395.2 |
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| CDS-3UTR GCA 90 bp | CTCCCAGAGCCTGCACTGCTAGAGACCAGATGCCAAGACAGAAGGTTGACATGGCTGTCCGGTGTCCTCTaGGGCGCCTCCCTGCCCTTT | + |
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Preference number: 4 (lower is better) Translates to: LPEPALLETRCQDRRLTWLSGVL*GASLPF Trigger: AAAGGGCAGGGAGGCGCCGCAGAGGACACCGGACAG...CCATGTCAACCTTCTGTCTTGGCATCTGGTCTCTAGCAGTGCAGGCTCTGGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101470.3 |
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| CDS-3UTR CCA 90 bp | GGTCCTATCCTGGTCCTTCTTCCAGCTCCCTGGGAGTCTTCCTCACCTGCAGAGGACCCAGGCTGTGTGTaGTGTGCCTCTGAGCACAGC | + |
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Preference number: 4 (lower is better) Translates to: GPILVLLPAPWESSSPAEDPGCV*CASEHS Trigger: GCTGTGCTCAGAGGCACACCACACACAGCCTGGGTC...CTCTGCAGGTGAGGAAGACTCCCAGGGAGCTGGAAGAAGGACCAGGATAGGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 ENSMUST00000114395.2 |
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| CDS-3UTR TCA 90 bp | TATTGGTCCTATCCTGGTCCTTCTTCCAGCTCCCTGGGAGTCTTCCTCACCTGCCAGGCTGAGAAGGAGTaGGAAGGCCCAGGCCACCAG | + |
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Preference number: 4 (lower is better) Translates to: YWSYPGPSSSSLGVFLTCQAEKE*EGPGHQ Trigger: CTGGTGGCCTGGGCCTTCTCACTCCTTCTCAGCCTG...GCAGGTGAGGAAGACTCCCAGGGAGCTGGAAGAAGGACCAGGATAGGACCAATA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 |
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| CDS-3UTR TCA 90 bp | GGTCCTATCCTGGTCCTTCTTCCAGCTCCCTGGGAGTCTTCCTCACCTGCAGAGGCACAGGACTCATCTTaGGGACCCAGGCTGTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GPILVLLPAPWESSSPAEAQDSS*GPRLCV Trigger: CACACACAGCCTGGGTCCTCAAGATGAGTCCTGTGC...CTCTGCAGGTGAGGAAGACTCCCAGGGAGCTGGAAGAAGGACCAGGATAGGACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 ENSMUST00000114395.2 |
||
| CDS-3UTR GCA 90 bp | CCACCAAGCCCACCATTCCACATAGGCCTATTGCTTCACCTCAGCCCTCTTCTATCTGCGGCGCCTCCCTaGCCTTTCAGATGGCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PPSPPFHIGLLLHLSPLLSAAPP*PFRWPW Trigger: CCAGGGCCATCTGAAAGGGCAGGGAGGCGCCGCAGA...TAGAAGAGGGCTGAGGTGAAGCAATAGGCCTATGTGGAATGGTGGGCTTGGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101470.3 |
||
| CDS-3UTR CCA 90 bp | GTCTATTGGTCCTATCCTGGTCCTTCTTCCAGCTCCCTGGGAGTCTTCCTCACCCATGGAAGCGGTCGGTaGCATCCCAAGCCAGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VYWSYPGPSSSSLGVFLTHGSGR*HPKPAG Trigger: CCCAGCTGGCTTGGGATGCCACCGACCGCTTCCATG...GGTGAGGAAGACTCCCAGGGAGCTGGAAGAAGGACCAGGATAGGACCAATAGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 |
||
| CDS-3UTR CCA 90 bp | GAGTCTTCCTCACCTGCAGAGTACTTGCCAGAATGGGAAGCCCAAGTGCCTCTGCATGGAAGCGGTCGGTaGCATCCCAAGCCAGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ESSSPAEYLPEWEAQVPLHGSGR*HPKPAG Trigger: CCCAGCTGGCTTGGGATGCCACCGACCGCTTCCATG...CAGAGGCACTTGGGCTTCCCATTCTGGCAAGTACTCTGCAGGTGAGGAAGACTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 |
||
| CDS-3UTR CCA 90 bp | GGAGGACCAAGGATAACCAAGGTACCCTTTCTTGGTACTCCCAGGGCCAACCCTCCCTGCCCTTTCAGATaGCCCTGGCACCAGACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GGPRITKVPFLGTPRANPPCPFR*PWHQTG Trigger: GCCAGTCTGGTGCCAGGGCCATCTGAAAGGGCAGGG...AGGGTTGGCCCTGGGAGTACCAAGAAAGGGTACCTTGGTTATCCTTGGTCCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 ENSMUST00000114395.2 |
||
| CDS-3UTR CCA 90 bp | GTCTATTGGTCCTATCCTGGTCCTTCTTCCAGCTCCCTGGGAGTCTTCCTCACCCATGGGCTCCCTCGCTaGGACTTCCTGTCCGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VYWSYPGPSSSSLGVFLTHGLPR*DFLSGV Trigger: GACACCGGACAGGAAGTCCCAGCGAGGGAGCCCATG...GGTGAGGAAGACTCCCAGGGAGCTGGAAGAAGGACCAGGATAGGACCAATAGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 |
||
| CDS-3UTR CCA 90 bp | GGTCCTATCCTGGTCCTTCTTCCAGCTCCCTGGGAGTCTTCCTCACCTGCAGAGTTCCAGAGGAGCTTCTaGATCCCACGCTGCCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: GPILVLLPAPWESSSPAEFQRSF*IPRCPQ Trigger: CTGTGGGCAGCGTGGGATCCAGAAGCTCCTCTGGAA...CTCTGCAGGTGAGGAAGACTCCCAGGGAGCTGGAAGAAGGACCAGGATAGGACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000114395.2 |
||
| CDS-3UTR GCA 90 bp | CTTCCTCACCTGCAGAGTACTTGCCAGAATGGGAAGCCCAAGTGCCTCTGTTGCCACGCTGCCCACAGCTaGACAAGGAAGAAGGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LPHLQSTCQNGKPKCLCCHAAHS*TRKKGA Trigger: GGCACCCTTCTTCCTTGTGCAGCTGTGGGCAGCGTG...GCAACAGAGGCACTTGGGCTTCCCATTCTGGCAAGTACTCTGCAGGTGAGGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000114395.2 |
||
| CDS-3UTR CCA 90 bp | TGGTCCTATCCTGGTCCTTCTTCCAGCTCCCTGGGAGTCTTCCTCACCTGCAGATTCCAGAGGAGCTTCTaGATCCCACGCTGCCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: WSYPGPSSSSLGVFLTCRFQRSF*IPRCPQ Trigger: CTGTGGGCAGCGTGGGATCCAGAAGCTCCTCTGGAA...TCTGCAGGTGAGGAAGACTCCCAGGGAGCTGGAAGAAGGACCAGGATAGGACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033765.8 |
||
| CDS-3UTR CCA 90 bp | TCCTCACCTGCAGAGTACTTGCCAGAATGGGAAGCCCAAGTGCCTCTGTTGCCTGACCCAGGCTGTGTGTaGTGTGCCTCTGAGCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSPAEYLPEWEAQVPLLPDPGCV*CASEHS Trigger: GCTGTGCTCAGAGGCACACCACACACAGCCTGGGTC...AGGCAACAGAGGCACTTGGGCTTCCCATTCTGGCAAGTACTCTGCAGGTGAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 ENSMUST00000114395.2 |
||
| CDS-3UTR GCA 90 bp | GAGTCTTCCTCACCTGCAGAGTACTTGCCAGAATGGGAAGCCCAAGTGCCTCTGACCTCCATGGCGGTATaGCAGCATAGGGCGGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: ESSSPAEYLPEWEAQVPLTSMAV*QHRAAD Trigger: ATCTGCCGCCCTATGCTGGCATACCGCCATGGAGGT...CAGAGGCACTTGGGCTTCCCATTCTGGCAAGTACTCTGCAGGTGAGGAAGACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 |
||
| CDS-3UTR GCA 90 bp | AGTCTTCCTCACCTGCAGAGTACTTGCCAGAATGGGAAGCCCAAGTGCCTCTGTCACGCTGCCCACAGCTaGACAAGGAAGAAGGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLPHLQSTCQNGKPKCLCHAAHS*TRKKGA Trigger: GGCACCCTTCTTCCTTGTGCAGCTGTGGGCAGCGTG...ACAGAGGCACTTGGGCTTCCCATTCTGGCAAGTACTCTGCAGGTGAGGAAGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000114395.2 |
||
| CDS-3UTR CCA 90 bp | CCTCCCATCCCCAGGGTCCAGATTCAACTCGCAAGCCAGTCTGAGGCAGCTTACCGGAAGATAAGAACCTaGCAGGCAGCAATGCCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: PPIPRVQIQLASQSEAAYRKIRT*QAAMPR Trigger: CCTAGGCATTGCTGCCTGCCAGGTTCTTATCTTCCG...GTAAGCTGCCTCAGACTGGCTTGCGAGTTGAATCTGGACCCTGGGGATGGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101470.3 |
||
| CDS-3UTR CCA 90 bp | TGTCACCTAGGGAGGACCAAGGATAACCAAGGTACCCTTTCTTGGTACTCCCAGCATGGGCTCCCTCGCTaGGACTTCCTGTCCGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: CHLGRTKDNQGTLSWYSQHGLPR*DFLSGV Trigger: GACACCGGACAGGAAGTCCCAGCGAGGGAGCCCATG...CTGGGAGTACCAAGAAAGGGTACCTTGGTTATCCTTGGTCCTCCCTAGGTGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 ENSMUST00000114395.2 |
||
| CDS-3UTR CCA 90 bp | AGTCTTCCTCACCTGCAGAGTACTTGCCAGAATGGGAAGCCCAAGTGCCTCTGTGACCCAGGCTGTGTGTaGTGTGCCTCTGAGCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLPHLQSTCQNGKPKCLCDPGCV*CASEHS Trigger: GCTGTGCTCAGAGGCACACCACACACAGCCTGGGTC...ACAGAGGCACTTGGGCTTCCCATTCTGGCAAGTACTCTGCAGGTGAGGAAGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 ENSMUST00000114395.2 |
||
| CDS-3UTR CCA 90 bp | TGGTCCTATCCTGGTCCTTCTTCCAGCTCCCTGGGAGTCTTCCTCACCTGCAGAGAGAGGAGCTGGCTGTaGCACAGGACTCATCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: WSYPGPSSSSLGVFLTCRERSWL*HRTHLE Trigger: CTCAAGATGAGTCCTGTGCCACAGCCAGCTCCTCTC...TCTGCAGGTGAGGAAGACTCCCAGGGAGCTGGAAGAAGGACCAGGATAGGACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 |
||
| CDS-3UTR TCA 90 bp | AGTCTTCCTCACCTGCAGAGTACTTGCCAGAATGGGAAGCCCAAGTGCCTCTGTGCACAGGACTCATCTTaGGGACCCAGGCTGTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SLPHLQSTCQNGKPKCLCAQDSS*GPRLCV Trigger: CACACACAGCCTGGGTCCTCAAGATGAGTCCTGTGC...ACAGAGGCACTTGGGCTTCCCATTCTGGCAAGTACTCTGCAGGTGAGGAAGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 ENSMUST00000114395.2 |
||
| CDS-3UTR CCA 90 bp | AGTCTTCCTCACCTGCAGAGTACTTGCCAGAATGGGAAGCCCAAGTGCCTCTGTTCCAGTAGCTCCTCCTaGCTGCTGTTGCTGGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLPHLQSTCQNGKPKCLCSSSSS*LLLLGE Trigger: CTCTCCCAGCAACAGCAGCCAGGAGGAGCTACTGGA...ACAGAGGCACTTGGGCTTCCCATTCTGGCAAGTACTCTGCAGGTGAGGAAGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 |
||
| CDS-3UTR CCA 90 bp | AATGACAGGAAGGTCTATTGGTCCTATCCTGGTCCTTCTTCCAGCTCCCTGGGAAAGGCATCAGGGCCATaGAAGCGGTCGGTGGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: NDRKVYWSYPGPSSSSLGKASGP*KRSVAS Trigger: GGATGCCACCGACCGCTTCCATGGCCCTGATGCCTT...TCCCAGGGAGCTGGAAGAAGGACCAGGATAGGACCAATAGACCTTCCTGTCATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 |
||
| CDS-3UTR CCA 90 bp | CTAGGCCTAAGGATCCTAGGGCAGGCTGGTAAAAACACAGGAGCTAAAGCCTGGGCCCTGGCACCAGACTaGCATGTATCTCCCGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGLRILGQAGKNTGAKAWALAPD*HVSPGR Trigger: TCTTCCGGGAGATACATGCCAGTCTGGTGCCAGGGC...CCAGGCTTTAGCTCCTGTGTTTTTACCAGCCTGCCCTAGGATCCTTAGGCCTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101470.3 |
||
| CDS-3UTR CCA 90 bp | GGTCCTATCCTGGTCCTTCTTCCAGCTCCCTGGGAGTCTTCCTCACCTGCAGAGTCATCCTCACGGTCTTaGCCATGGCTGCTGATACAT | + |
|
Preference number: 4 (lower is better) Translates to: GPILVLLPAPWESSSPAESSSRS*PWLLIH Trigger: ATGTATCAGCAGCCATGGCCAAGACCGTGAGGATGA...CTCTGCAGGTGAGGAAGACTCCCAGGGAGCTGGAAGAAGGACCAGGATAGGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 ENSMUST00000114395.2 |
||
| 3UTR CAA 72 bp | CAGCCACCACCAAGCCCACCATTCCACATAGGCCTATaGCTTCACCTCAGCCCTCTTCTAGGTCTCTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QPPPSPPFHIGL*LHLSPLLGLLG Trigger: TCCCAAGAGACCTAGAAGAGGGCTGAGGTGAAGCAATAGGCCTATGTGGAATGGTGGGCTTGGTGGTGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101470.3 |
||
| CDS-3UTR TCA 90 bp | GGTATGGTAGCCAAGGCCTTAGTTTGGAGATTGGCAGAAACTCACTGGGCACTCCCATCTGCAGGTACTTaGCGGCCCGACACAAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GMVAKALVWRLAETHWALPSAGT*RPDTRH Trigger: ATGCCTTGTGTCGGGCCGTCAAGTACCTGCAGATGG...GAGTGCCCAGTGAGTTTCTGCCAATCTCCAAACTAAGGCCTTGGCTACCATACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101470.3 |
||
| CDS-3UTR GCA 90 bp | CCACCAAGCCCACCATTCCACATAGGCCTATTGCTTCACCTCAGCCCTCTTCTATACATGCCCACCATCTaGAGGTACTTGACGGCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: PPSPPFHIGLLLHLSPLLYMPTI*RYLTAR Trigger: TCGGGCCGTCAAGTACCTGCAGATGGTGGGCATGTA...TAGAAGAGGGCTGAGGTGAAGCAATAGGCCTATGTGGAATGGTGGGCTTGGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101470.3 |
||
| CDS-3UTR CCA 90 bp | CTTCCTCACCTGCAGAGTACTTGCCAGAATGGGAAGCCCAAGTGCCTCTGTTGCGGCGGTCTAGTGTCATaGCCAGGATCATGTAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LPHLQSTCQNGKPKCLCCGGLVS*PGSCRK Trigger: CTTCCTACATGATCCTGGCCATGACACTAGACCGCC...GCAACAGAGGCACTTGGGCTTCCCATTCTGGCAAGTACTCTGCAGGTGAGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 |
||
| CDS-3UTR CCA 90 bp | CTTCCTCACCTGCAGAGTACTTGCCAGAATGGGAAGCCCAAGTGCCTCTGTTGCCCTTTCAGATGGCCCTaGCACCAGACTGGCATGTAT | + |
|
Preference number: 4 (lower is better) Translates to: LPHLQSTCQNGKPKCLCCPFRWP*HQTGMY Trigger: ATACATGCCAGTCTGGTGCCAGGGCCATCTGAAAGG...GCAACAGAGGCACTTGGGCTTCCCATTCTGGCAAGTACTCTGCAGGTGAGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 ENSMUST00000114395.2 |
||
| CDS-3UTR CCA 90 bp | TCCTCACCTGCAGAGTACTTGCCAGAATGGGAAGCCCAAGTGCCTCTGTTGCCTTCATCAGAGAGGAGCTaGCTGTGGCACAGGACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SSPAEYLPEWEAQVPLLPSSERS*LWHRTH Trigger: ATGAGTCCTGTGCCACAGCCAGCTCCTCTCTGATGA...AGGCAACAGAGGCACTTGGGCTTCCCATTCTGGCAAGTACTCTGCAGGTGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000114395.2 |
||
| CDS-3UTR GCA 90 bp | TCCTCACCTGCAGAGTACTTGCCAGAATGGGAAGCCCAAGTGCCTCTGTTGCCTAGGAAGAGGCATACATaGCCACCATCTGCAGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: SSPAEYLPEWEAQVPLLPRKRHT*PPSAGT Trigger: AGTACCTGCAGATGGTGGGCATGTATGCCTCTTCCT...AGGCAACAGAGGCACTTGGGCTTCCCATTCTGGCAAGTACTCTGCAGGTGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 |
||
| CDS-3UTR GCA 90 bp | CTGGGGACCTGCTCTCAAAAATACAGTCTTGGTTGCTTATATCACAGATTCCTGTCTGCGGCGCCTCCCTaGCCTTTCAGATGGCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LGTCSQKYSLGCLYHRFLSAAPP*PFRWPW Trigger: CCAGGGCCATCTGAAAGGGCAGGGAGGCGCCGCAGA...CAGGAATCTGTGATATAAGCAACCAAGACTGTATTTTTGAGAGCAGGTCCCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 |
||
| CDS-3UTR GCA 90 bp | ATAGGTATGTCTATGGGTGTGCGAATCTTTGTATTTCAGCTTCTGTGCCCACCACTGTCCGGTGTCCTCTaGGGCGCCTCCCTGCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: IGMSMGVRIFVFQLLCPPLSGVL*GASLPF Trigger: AAAGGGCAGGGAGGCGCCGCAGAGGACACCGGACAG...TGGTGGGCACAGAAGCTGAAATACAAAGATTCGCACACCCATAGACATACCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 |
||
| CDS-3UTR CCA 90 bp | CAATGTCACCTAGGGAGGACCAAGGATAACCAAGGTACCCTTTCTTGGTACTCCTCCAGTAGCTCCTCCTaGCTGCTGTTGCTGGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: QCHLGRTKDNQGTLSWYSSSSSS*LLLLGE Trigger: CTCTCCCAGCAACAGCAGCCAGGAGGAGCTACTGGA...GGAGTACCAAGAAAGGGTACCTTGGTTATCCTTGGTCCTCCCTAGGTGACATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 |
||
| CDS-3UTR CCA 90 bp | CAATGTCACCTAGGGAGGACCAAGGATAACCAAGGTACCCTTTCTTGGTACTCCGCCCTGGCACCAGACTaGCATGTATCTCCCGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QCHLGRTKDNQGTLSWYSALAPD*HVSPGR Trigger: TCTTCCGGGAGATACATGCCAGTCTGGTGCCAGGGC...GGAGTACCAAGAAAGGGTACCTTGGTTATCCTTGGTCCTCCCTAGGTGACATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 ENSMUST00000114395.2 |
||
| 3UTR CAA 72 bp | GAGTACTTGCCAGAATGGGAAGCCCAAGTGCCTCTGTaGCCTATTCTCCTCCTAGACCTTGAGGCATCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: EYLPEWEAQVPL*PILLLDLEASV Trigger: GACAGATGCCTCAAGGTCTAGGAGGAGAATAGGCAACAGAGGCACTTGGGCTTCCCATTCTGGCAAGTACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 ENSMUST00000114395.2 |
||
| CDS-3UTR GCA 90 bp | AAAGGAGCCAATGTTAAGGTTTCTTTACACCCTTCCTTCTTGTATACCTGGGGACTGTCCGGTGTCCTCTaGGGCGCCTCCCTGCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KGANVKVSLHPSFLYTWGLSGVL*GASLPF Trigger: AAAGGGCAGGGAGGCGCCGCAGAGGACACCGGACAG...TCCCCAGGTATACAAGAAGGAAGGGTGTAAAGAAACCTTAACATTGGCTCCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 ENSMUST00000114395.2 |
||
| CDS-3UTR CCA 90 bp | AATGACAGGAAGGTCTATTGGTCCTATCCTGGTCCTTCTTCCAGCTCCCTGGGACCTTTCAGATGGCCCTaGCACCAGACTGGCATGTAT | + |
|
Preference number: 4 (lower is better) Translates to: NDRKVYWSYPGPSSSSLGPFRWP*HQTGMY Trigger: ATACATGCCAGTCTGGTGCCAGGGCCATCTGAAAGG...TCCCAGGGAGCTGGAAGAAGGACCAGGATAGGACCAATAGACCTTCCTGTCATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 |
||
| CDS-3UTR CCA 90 bp | ATAGGTATGTCTATGGGTGTGCGAATCTTTGTATTTCAGCTTCTGTGCCCACCACCCTGCCCTTTCAGATaGCCCTGGCACCAGACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: IGMSMGVRIFVFQLLCPPPCPFR*PWHQTG Trigger: GCCAGTCTGGTGCCAGGGCCATCTGAAAGGGCAGGG...TGGTGGGCACAGAAGCTGAAATACAAAGATTCGCACACCCATAGACATACCTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 |
||
| CDS-3UTR CCA 90 bp | CAATGTCACCTAGGGAGGACCAAGGATAACCAAGGTACCCTTTCTTGGTACTCCTCACGGTCTTGGCCATaGCTGCTGATACATGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QCHLGRTKDNQGTLSWYSSRSWP*LLIHGL Trigger: GAGCCCATGTATCAGCAGCCATGGCCAAGACCGTGA...GGAGTACCAAGAAAGGGTACCTTGGTTATCCTTGGTCCTCCCTAGGTGACATTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 ENSMUST00000114395.2 |
||
| CDS-3UTR CCA 90 bp | CTGTTGCCTATTCTCCTCCTAGACCTTGAGGCATCTGTCCCAGTTGCTTCCCATTCATCAGAGAGGAGCTaGCTGTGGCACAGGACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LLPILLLDLEASVPVASHSSERS*LWHRTH Trigger: ATGAGTCCTGTGCCACAGCCAGCTCCTCTCTGATGA...ATGGGAAGCAACTGGGACAGATGCCTCAAGGTCTAGGAGGAGAATAGGCAACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000114395.2 |
||
| CDS-3UTR TCA 90 bp | CCAACCCTAGATAGTCAGCTAAGCTACAATGGGTTTTTGAATAGAAAGAGCCCACAGGCTGAGAAGGAGTaGGAAGGCCCAGGCCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: PTLDSQLSYNGFLNRKSPQAEKE*EGPGHQ Trigger: CTGGTGGCCTGGGCCTTCTCACTCCTTCTCAGCCTG...TGGGCTCTTTCTATTCAAAAACCCATTGTAGCTTAGCTGACTATCTAGGGTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 |
||
| CDS-3UTR TCA 90 bp | CTGGGGACCTGCTCTCAAAAATACAGTCTTGGTTGCTTATATCACAGATTCCTGAGAGCTGAGGCAGGCTaGGAAGGAGTGAGAAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LGTCSQKYSLGCLYHRFLRAEAG*EGVRRP Trigger: GGGCCTTCTCACTCCTTCTCAGCCTGCCTCAGCTCT...CAGGAATCTGTGATATAAGCAACCAAGACTGTATTTTTGAGAGCAGGTCCCCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 |
||
| CDS-3UTR GCA 90 bp | CAGCTAAGCTACAATGGGTTTTTGAATAGAAAGAGCCCAGTAGCTACTCAGGAGCCTGGCAGGCAGCAATaGCTAGGGCAGGTGCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: QLSYNGFLNRKSPVATQEPGRQQ*LGQVPQ Trigger: TTGTGGCACCTGCCCTAGGCATTGCTGCCTGCCAGG...CTCCTGAGTAGCTACTGGGCTCTTTCTATTCAAAAACCCATTGTAGCTTAGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101470.3 |
||
| CDS-3UTR CCA 90 bp | CAATGTCACCTAGGGAGGACCAAGGATAACCAAGGTACCCTTTCTTGGTACTCCCGGAAGATAAGAACCTaGCAGGCAGCAATGCCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: QCHLGRTKDNQGTLSWYSRKIRT*QAAMPR Trigger: CCTAGGCATTGCTGCCTGCCAGGTTCTTATCTTCCG...GGAGTACCAAGAAAGGGTACCTTGGTTATCCTTGGTCCTCCCTAGGTGACATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 |
||
| CDS-3UTR TCA 90 bp | CCTGGGGACCTGCTCTCAAAAATACAGTCTTGGTTGCTTATATCACAGATTCCTCCATCTGCAGGTACTTaGCGGCCCGACACAAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PGDLLSKIQSWLLISQIPPSAGT*RPDTRH Trigger: ATGCCTTGTGTCGGGCCGTCAAGTACCTGCAGATGG...AGGAATCTGTGATATAAGCAACCAAGACTGTATTTTTGAGAGCAGGTCCCCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 |
||
| CDS-3UTR TCA 90 bp | ATGGGTGTGCGAATCTTTGTATTTCAGCTTCTGTGCCCACCATATACCTGGTCCGCAAAGATGAAGAGCTaGGGCAGGCTGAGAAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: MGVRIFVFQLLCPPYTWSAKMKS*GRLRRS Trigger: ACTCCTTCTCAGCCTGCCTCAGCTCTTCATCTTTGC...GGACCAGGTATATGGTGGGCACAGAAGCTGAAATACAAAGATTCGCACACCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 |
||
| CDS-3UTR TCA 90 bp | CAGCTAAGCTACAATGGGTTTTTGAATAGAAAGAGCCCAGTAGCTACTCAGGAGGCACAGGACTCATCTTaGGGACCCAGGCTGTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: QLSYNGFLNRKSPVATQEAQDSS*GPRLCV Trigger: CACACACAGCCTGGGTCCTCAAGATGAGTCCTGTGC...CTCCTGAGTAGCTACTGGGCTCTTTCTATTCAAAAACCCATTGTAGCTTAGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101470.3 |
||
| CDS-3UTR GCA 90 bp | CCTGGGGACCTGCTCTCAAAAATACAGTCTTGGTTGCTTATATCACAGATTCCTACCTCCATGGCGGTATaGCAGCATAGGGCGGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PGDLLSKIQSWLLISQIPTSMAV*QHRAAD Trigger: ATCTGCCGCCCTATGCTGGCATACCGCCATGGAGGT...AGGAATCTGTGATATAAGCAACCAAGACTGTATTTTTGAGAGCAGGTCCCCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 |
||
| CDS-3UTR GCA 90 bp | AAAGGAGCCAATGTTAAGGTTTCTTTACACCCTTCCTTCTTGTATACCTGGGGACCTGGCAGGCAGCAATaGCTAGGGCAGGTGCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: KGANVKVSLHPSFLYTWGPGRQQ*LGQVPQ Trigger: TTGTGGCACCTGCCCTAGGCATTGCTGCCTGCCAGG...TCCCCAGGTATACAAGAAGGAAGGGTGTAAAGAAACCTTAACATTGGCTCCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 |
||
| CDS-3UTR CCA 90 bp | TCTGGCAACAAAGGAGCCAATGTTAAGGTTTCTTTACACCCTTCCTTCTTGTATCCCTGCCCTTTCAGATaGCCCTGGCACCAGACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SGNKGANVKVSLHPSFLYPCPFR*PWHQTG Trigger: GCCAGTCTGGTGCCAGGGCCATCTGAAAGGGCAGGG...ATACAAGAAGGAAGGGTGTAAAGAAACCTTAACATTGGCTCCTTTGTTGCCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 ENSMUST00000114395.2 |
||
| CDS-3UTR GCA 90 bp | CCAGGGCCAACCCTAGATAGTCAGCTAAGCTACAATGGGTTTTTGAATAGAAAGTACATGCCCACCATCTaGAGGTACTTGACGGCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: PGPTLDSQLSYNGFLNRKYMPTI*RYLTAR Trigger: TCGGGCCGTCAAGTACCTGCAGATGGTGGGCATGTA...CTTTCTATTCAAAAACCCATTGTAGCTTAGCTGACTATCTAGGGTTGGCCCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 |
||
| CDS-3UTR CCA 90 bp | CCAGGGCCAACCCTAGATAGTCAGCTAAGCTACAATGGGTTTTTGAATAGAAAGTCACGGTCTTGGCCATaGCTGCTGATACATGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PGPTLDSQLSYNGFLNRKSRSWP*LLIHGL Trigger: GAGCCCATGTATCAGCAGCCATGGCCAAGACCGTGA...CTTTCTATTCAAAAACCCATTGTAGCTTAGCTGACTATCTAGGGTTGGCCCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 ENSMUST00000114395.2 |
||
| CDS-3UTR TCA 90 bp | CAGCTAAGCTACAATGGGTTTTTGAATAGAAAGAGCCCAGTAGCTACTCAGGAGGCAAAGATGAAGAGCTaGGGCAGGCTGAGAAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: QLSYNGFLNRKSPVATQEAKMKS*GRLRRS Trigger: ACTCCTTCTCAGCCTGCCTCAGCTCTTCATCTTTGC...CTCCTGAGTAGCTACTGGGCTCTTTCTATTCAAAAACCCATTGTAGCTTAGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101470.3 |
||
| CDS-3UTR GCA 90 bp | AAAGGAGCCAATGTTAAGGTTTCTTTACACCCTTCCTTCTTGTATACCTGGGGATTCTGGATCCCACGCTaGCCACAGCTGCACAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KGANVKVSLHPSFLYTWGFWIPR*PQLHKE Trigger: TTCCTTGTGCAGCTGTGGGCAGCGTGGGATCCAGAA...TCCCCAGGTATACAAGAAGGAAGGGTGTAAAGAAACCTTAACATTGGCTCCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000114395.2 |
||
| CDS-3UTR CCA 90 bp | CCAGGGCCAACCCTAGATAGTCAGCTAAGCTACAATGGGTTTTTGAATAGAAAGCCTTTCAGATGGCCCTaGCACCAGACTGGCATGTAT | + |
|
Preference number: 4 (lower is better) Translates to: PGPTLDSQLSYNGFLNRKPFRWP*HQTGMY Trigger: ATACATGCCAGTCTGGTGCCAGGGCCATCTGAAAGG...CTTTCTATTCAAAAACCCATTGTAGCTTAGCTGACTATCTAGGGTTGGCCCTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 ENSMUST00000114395.2 |
||
| CDS-3UTR GCA 90 bp | CCAACCCTAGATAGTCAGCTAAGCTACAATGGGTTTTTGAATAGAAAGAGCCCACAAGCACTAGGCCATTaGTCAAGGCCACAGCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: PTLDSQLSYNGFLNRKSPQALGH*SRPQPQ Trigger: TTGTGGCTGTGGCCTTGAGCAATGGCCTAGTGCTTG...TGGGCTCTTTCTATTCAAAAACCCATTGTAGCTTAGCTGACTATCTAGGGTTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 |
||
| CDS-3UTR GCA 90 bp | TGGTTGCTTATATCACAGATTCCTGAACATAGGTATGTCTATGGGTGTGCGAATTTCTGGATCCCACGCTaGCCACAGCTGCACAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: WLLISQIPEHRYVYGCANFWIPR*PQLHKE Trigger: TTCCTTGTGCAGCTGTGGGCAGCGTGGGATCCAGAA...ATTCGCACACCCATAGACATACCTATGTTCAGGAATCTGTGATATAAGCAACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033765.8 |
||
| CDS-3UTR CCA 90 bp | AAAGGAGCCAATGTTAAGGTTTCTTTACACCCTTCCTTCTTGTATACCTGGGGAGGCGGTCTAGTGTCATaGCCAGGATCATGTAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KGANVKVSLHPSFLYTWGGGLVS*PGSCRK Trigger: CTTCCTACATGATCCTGGCCATGACACTAGACCGCC...TCCCCAGGTATACAAGAAGGAAGGGTGTAAAGAAACCTTAACATTGGCTCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 |
||
| CDS-3UTR CCA 90 bp | TCTGGCAACAAAGGAGCCAATGTTAAGGTTTCTTTACACCCTTCCTTCTTGTATTCACGGTCTTGGCCATaGCTGCTGATACATGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SGNKGANVKVSLHPSFLYSRSWP*LLIHGL Trigger: GAGCCCATGTATCAGCAGCCATGGCCAAGACCGTGA...ATACAAGAAGGAAGGGTGTAAAGAAACCTTAACATTGGCTCCTTTGTTGCCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 ENSMUST00000114395.2 |
||
| CDS-3UTR CCA 90 bp | CCAGGGCCAACCCTAGATAGTCAGCTAAGCTACAATGGGTTTTTGAATAGAAAGTCATCCTCACGGTCTTaGCCATGGCTGCTGATACAT | + |
|
Preference number: 4 (lower is better) Translates to: PGPTLDSQLSYNGFLNRKSSSRS*PWLLIH Trigger: ATGTATCAGCAGCCATGGCCAAGACCGTGAGGATGA...CTTTCTATTCAAAAACCCATTGTAGCTTAGCTGACTATCTAGGGTTGGCCCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 ENSMUST00000114395.2 |
||
| CDS-3UTR CCA 90 bp | TCTGGCAACAAAGGAGCCAATGTTAAGGTTTCTTTACACCCTTCCTTCTTGTATGAGAGGAGCTGGCTGTaGCACAGGACTCATCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SGNKGANVKVSLHPSFLYERSWL*HRTHLE Trigger: CTCAAGATGAGTCCTGTGCCACAGCCAGCTCCTCTC...ATACAAGAAGGAAGGGTGTAAAGAAACCTTAACATTGGCTCCTTTGTTGCCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 ENSMUST00000114395.2 |
||
| CDS-3UTR CCA 90 bp | TGCTCTCAAAAATACAGTCTTGGTTGCTTATATCACAGATTCCTGAACATAGGTGCCCTGGCACCAGACTaGCATGTATCTCCCGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: CSQKYSLGCLYHRFLNIGALAPD*HVSPGR Trigger: TCTTCCGGGAGATACATGCCAGTCTGGTGCCAGGGC...ACCTATGTTCAGGAATCTGTGATATAAGCAACCAAGACTGTATTTTTGAGAGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 |
||
| 3UTR CAA 72 bp | CCAACCCTAGATAGTCAGCTAAGCTACAATGGGTTTTaGAATAGAAAGAGCCCAGTAGCTACTCAGGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PTLDSQLSYNGF*NRKSPVATQEG Trigger: ACCCTCCTGAGTAGCTACTGGGCTCTTTCTATTCAAAAACCCATTGTAGCTTAGCTGACTATCTAGGGTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101470.3 |
||
| CDS-3UTR CCA 90 bp | TCTGGCAACAAAGGAGCCAATGTTAAGGTTTCTTTACACCCTTCCTTCTTGTATTCATCCTCACGGTCTTaGCCATGGCTGCTGATACAT | + |
|
Preference number: 4 (lower is better) Translates to: SGNKGANVKVSLHPSFLYSSSRS*PWLLIH Trigger: ATGTATCAGCAGCCATGGCCAAGACCGTGAGGATGA...ATACAAGAAGGAAGGGTGTAAAGAAACCTTAACATTGGCTCCTTTGTTGCCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 ENSMUST00000114395.2 |
||
| CDS-3UTR CCA 90 bp | TTATATCACAGATTCCTGAACATAGGTATGTCTATGGGTGTGCGAATCTTTGTAGAGAGGAGCTGGCTGTaGCACAGGACTCATCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LYHRFLNIGMSMGVRIFVERSWL*HRTHLE Trigger: CTCAAGATGAGTCCTGTGCCACAGCCAGCTCCTCTC...TACAAAGATTCGCACACCCATAGACATACCTATGTTCAGGAATCTGTGATATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 |
||
| CDS-3UTR GCA 90 bp | TTATATCACAGATTCCTGAACATAGGTATGTCTATGGGTGTGCGAATCTTTGTACAAGCACTAGGCCATTaGTCAAGGCCACAGCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: LYHRFLNIGMSMGVRIFVQALGH*SRPQPQ Trigger: TTGTGGCTGTGGCCTTGAGCAATGGCCTAGTGCTTG...TACAAAGATTCGCACACCCATAGACATACCTATGTTCAGGAATCTGTGATATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 |
||
| 3UTR CAA 72 bp | TCACCTGGGGACCTGCTCTCAAAAATACAGTCTTGGTaGCTTATATCACAGATTCCTGAACATAGGTATGTC | + |
|
Preference number: 4 (lower is better) Translates to: SPGDLLSKIQSW*LISQIPEHRYV Trigger: GACATACCTATGTTCAGGAATCTGTGATATAAGCAACCAAGACTGTATTTTTGAGAGCAGGTCCCCAGGTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 |
||
| CDS GCA 90 bp | CTGATACATGGGCTCCCTCGCTGGGACTTCCTGTCCGGTGTCCTCTaGGGCGCCTCCCTGCCCTTTCAGATGGCCCTGGCACCAGACTGG | + |
|
Preference number: 5 (lower is better) Translates to: LIHGLPRWDFLSGVL*GASLPFQMALAPDW Trigger: CCAGTCTGGTGCCAGGGCCATCTGAAAGGGCAGGGAGGCGCCGCAGAGGACACCGGACAGGAAGTCCCAGCGAGGGAGCCCATGTATCAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 ENSMUST00000114395.2 |
||
| CDS CCA 90 bp | GGGTCCAGTGTCATCCTCACGGTCTTGGCCATGGCTGCTGATACATaGGCTCCCTCGCTGGGACTTCCTGTCCGGTGTCCTCTGCGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: GSSVILTVLAMAADT*APSLGLPVRCPLRR Trigger: GCGCCGCAGAGGACACCGGACAGGAAGTCCCAGCGAGGGAGCCCATGTATCAGCAGCCATGGCCAAGACCGTGAGGATGACACTGGACCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101470.3 |
||
| CDS CCA 90 bp | ATCACCAGTGTCATCCTCACGGTCTTGGCCATGGCTGCTGATACATaGGCTCCCTCGCTGGGACTTCCTGTCCGGTGTCCTCTGCGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: ITSVILTVLAMAADT*APSLGLPVRCPLRR Trigger: GCGCCGCAGAGGACACCGGACAGGAAGTCCCAGCGAGGGAGCCCATGTATCAGCAGCCATGGCCAAGACCGTGAGGATGACACTGGTGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000114395.2 |
||
| CDS CCA 90 bp | TGTCCGGTGTCCTCTGCGGCGCCTCCCTGCCCTTTCAGATGGCCCTaGCACCAGACTGGCATGTATCTCCCGGAAGATAAGAACCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: CPVSSAAPPCPFRWP*HQTGMYLPEDKNLA Trigger: TGCCAGGTTCTTATCTTCCGGGAGATACATGCCAGTCTGGTGCCAGGGCCATCTGAAAGGGCAGGGAGGCGCCGCAGAGGACACCGGACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 ENSMUST00000114395.2 |
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| CDS-3UTR CAA 90 bp | GGTCCTATCCTGGTCCTTCTTCCAGCTCCCTGGGAGTCTTCCTCACCTGCAGAGCAGCTGGGGCAGCACTaGAAACAGAGCCACAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GPILVLLPAPWESSSPAEQLGQH*KQSHSQ Trigger: CTGGCTGTGGCTCTGTTTCAAGTGCTGCCCCAGCTG...CTCTGCAGGTGAGGAAGACTCCCAGGGAGCTGGAAGAAGGACCAGGATAGGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 |
||
| CDS-3UTR CAA 90 bp | GGTCCTATCCTGGTCCTTCTTCCAGCTCCCTGGGAGTCTTCCTCACCTGCAGAGGGCACAGGACTCATCTaGAGGACCCAGGCTGTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: GPILVLLPAPWESSSPAEGTGLI*RTQAVC Trigger: ACACACAGCCTGGGTCCTCAAGATGAGTCCTGTGCC...CTCTGCAGGTGAGGAAGACTCCCAGGGAGCTGGAAGAAGGACCAGGATAGGACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 ENSMUST00000114395.2 |
||
| CDS CCA 90 bp | GGCCCTGGCACCAGACTGGCATGTATCTCCCGGAAGATAAGAACCTaGCAGGCAGCAATGCCTAGGGCAGGTGCCACAAACACCATCAAG | + |
|
Preference number: 5 (lower is better) Translates to: GPGTRLACISRKIRT*QAAMPRAGATNTIK Trigger: CTTGATGGTGTTTGTGGCACCTGCCCTAGGCATTGCTGCCTGCCAGGTTCTTATCTTCCGGGAGATACATGCCAGTCTGGTGCCAGGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 |
||
| CDS TCA 90 bp | AATCACAATCACCAGTGTCATCCTCACGGTCTTGGCCATGGCTGCTaGTACATGGGCTCCCTCGCTGGGACTTCCTGTCCGGTGTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: NHNHQCHPHGLGHGC*YMGSLAGTSCPVSS Trigger: AGAGGACACCGGACAGGAAGTCCCAGCGAGGGAGCCCATGTATCAGCAGCCATGGCCAAGACCGTGAGGATGACACTGGTGATTGTGATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000114395.2 |
||
| CDS GCA 90 bp | CATCAAGGCGATCCAGGTGACATAGGCACGAAGGCCCCATGGCTCTaGAAATCGGGCCCAGCAATCAAATACCCCACTGCCATTTCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: HQGDPGDIGTKAPWL*KSGPAIKYPTAISH Trigger: GTGGGAAATGGCAGTGGGGTATTTGATTGCTGGGCCCGATTTGCAGAGCCATGGGGCCTTCGTGCCTATGTCACCTGGATCGCCTTGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 |
||
| CDS CCA 90 bp | ACAGCACGTAGACAATCACAATCACCAGTGTCATCCTCACGGTCTTaGCCATGGCTGCTGATACATGGGCTCCCTCGCTGGGACTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: TARRQSQSPVSSSRS*PWLLIHGLPRWDFL Trigger: CAGGAAGTCCCAGCGAGGGAGCCCATGTATCAGCAGCCATGGCCAAGACCGTGAGGATGACACTGGTGATTGTGATTGTCTACGTGCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000114395.2 |
||
| CDS CCA 90 bp | AAACACCATCAAGGCGATCCAGGTGACATAGGCACGAAGGCCCCATaGCTCTGCAAATCGGGCCCAGCAATCAAATACCCCACTGCCATT | + |
|
Preference number: 5 (lower is better) Translates to: KHHQGDPGDIGTKAP*LCKSGPAIKYPTAI Trigger: AATGGCAGTGGGGTATTTGATTGCTGGGCCCGATTTGCAGAGCCATGGGGCCTTCGTGCCTATGTCACCTGGATCGCCTTGATGGTGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 |
||
| CDS-3UTR CAA 90 bp | ATGGGTGTGCGAATCTTTGTATTTCAGCTTCTGTGCCCACCATATACCTGGTCCTCCTCCTGGCTGCTGTaGCTGGGAGAGCTAGGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: MGVRIFVFQLLCPPYTWSSSWLL*LGELGD Trigger: GTCCCCTAGCTCTCCCAGCAACAGCAGCCAGGAGGA...GGACCAGGTATATGGTGGGCACAGAAGCTGAAATACAAAGATTCGCACACCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 |
||
| CDS-3UTR CAA 90 bp | ATGGGTGTGCGAATCTTTGTATTTCAGCTTCTGTGCCCACCATATACCTGGTCCCAGCTGGGGCAGCACTaGAAACAGAGCCACAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: MGVRIFVFQLLCPPYTWSQLGQH*KQSHSQ Trigger: CTGGCTGTGGCTCTGTTTCAAGTGCTGCCCCAGCTG...GGACCAGGTATATGGTGGGCACAGAAGCTGAAATACAAAGATTCGCACACCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 |
||
| CDS-3UTR CAA 90 bp | TCTGGCAACAAAGGAGCCAATGTTAAGGTTTCTTTACACCCTTCCTTCTTGTATTCCTCCTGGCTGCTGTaGCTGGGAGAGCTAGGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SGNKGANVKVSLHPSFLYSSWLL*LGELGD Trigger: GTCCCCTAGCTCTCCCAGCAACAGCAGCCAGGAGGA...ATACAAGAAGGAAGGGTGTAAAGAAACCTTAACATTGGCTCCTTTGTTGCCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 |
||
| CDS GCA 72 bp | TGGCCTGTTCCAGCGAGCCCCACCTCCATGGCGGTATaGCAGCATAGGGCGGCAGATGGCGCGATGGCGGTC | + |
|
Preference number: 6 (lower is better) Translates to: WPVPASPTSMAV*QHRAADGAMAV Trigger: GACCGCCATCGCGCCATCTGCCGCCCTATGCTGGCATACCGCCATGGAGGTGGGGCTCGCTGGAACAGGCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 |
||
| CDS CCA 72 bp | ACCAGCACTGGCCTGTTCCAGCGAGCCCCACCTCCATaGCGGTATGCCAGCATAGGGCGGCAGATGGCGCGA | + |
|
Preference number: 6 (lower is better) Translates to: TSTGLFQRAPPP*RYASIGRQMAR Trigger: TCGCGCCATCTGCCGCCCTATGCTGGCATACCGCCATGGAGGTGGGGCTCGCTGGAACAGGCCAGTGCTGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 |
||
| CDS CCA 72 bp | CCGGTGTCCTCTGCGGCGCCTCCCTGCCCTTTCAGATaGCCCTGGCACCAGACTGGCATGTATCTCCCGGAA | + |
|
Preference number: 6 (lower is better) Translates to: PVSSAAPPCPFR*PWHQTGMYLPE Trigger: TTCCGGGAGATACATGCCAGTCTGGTGCCAGGGCCATCTGAAAGGGCAGGGAGGCGCCGCAGAGGACACCGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 ENSMUST00000114395.2 |
||
| CDS CCA 72 bp | CCCGACACAAGGCATCAGGGCCATGGAAGCGGTCGGTaGCATCCCAAGCCAGCTGGGGCAGCACTTGAAACA | + |
|
Preference number: 6 (lower is better) Translates to: PDTRHQGHGSGR*HPKPAGAALET Trigger: TGTTTCAAGTGCTGCCCCAGCTGGCTTGGGATGCCACCGACCGCTTCCATGGCCCTGATGCCTTGTGTCGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 |
||
| CDS TCA 72 bp | CACCAGTGTCATCCTCACGGTCTTGGCCATGGCTGCTaGTACATGGGCTCCCTCGCTGGGACTTCCTGTCCG | + |
|
Preference number: 6 (lower is better) Translates to: HQCHPHGLGHGC*YMGSLAGTSCP Trigger: CGGACAGGAAGTCCCAGCGAGGGAGCCCATGTATCAGCAGCCATGGCCAAGACCGTGAGGATGACACTGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000114395.2 |
||
| CDS CCA 72 bp | TCCTCTGCGGCGCCTCCCTGCCCTTTCAGATGGCCCTaGCACCAGACTGGCATGTATCTCCCGGAAGATAAG | + |
|
Preference number: 6 (lower is better) Translates to: SSAAPPCPFRWP*HQTGMYLPEDK Trigger: CTTATCTTCCGGGAGATACATGCCAGTCTGGTGCCAGGGCCATCTGAAAGGGCAGGGAGGCGCCGCAGAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 ENSMUST00000114395.2 |
||
| CDS CCA 72 bp | GTCATCCTCACGGTCTTGGCCATGGCTGCTGATACATaGGCTCCCTCGCTGGGACTTCCTGTCCGGTGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: VILTVLAMAADT*APSLGLPVRCP Trigger: AGGACACCGGACAGGAAGTCCCAGCGAGGGAGCCCATGTATCAGCAGCCATGGCCAAGACCGTGAGGATGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 ENSMUST00000114395.2 |
||
| CDS TCA 72 bp | GGGCAGGTGCCACAAACACCATCAAGGCGATCCAGGTaGCATAGGCACGAAGGCCCCATGGCTCTGCAAATC | + |
|
Preference number: 6 (lower is better) Translates to: GQVPQTPSRRSR*HRHEGPMALQI Trigger: GATTTGCAGAGCCATGGGGCCTTCGTGCCTATGTCACCTGGATCGCCTTGATGGTGTTTGTGGCACCTGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 |
||
| CDS GCA 72 bp | GATCCAGGTGACATAGGCACGAAGGCCCCATGGCTCTaGAAATCGGGCCCAGCAATCAAATACCCCACTGCC | + |
|
Preference number: 6 (lower is better) Translates to: DPGDIGTKAPWL*KSGPAIKYPTA Trigger: GGCAGTGGGGTATTTGATTGCTGGGCCCGATTTGCAGAGCCATGGGGCCTTCGTGCCTATGTCACCTGGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 |
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| CDS CCA 72 bp | CAAGGCGATCCAGGTGACATAGGCACGAAGGCCCCATaGCTCTGCAAATCGGGCCCAGCAATCAAATACCCC | + |
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Preference number: 6 (lower is better) Translates to: QGDPGDIGTKAP*LCKSGPAIKYP Trigger: GGGGTATTTGATTGCTGGGCCCGATTTGCAGAGCCATGGGGCCTTCGTGCCTATGTCACCTGGATCGCCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 |
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| CDS CCA 72 bp | AGACAATCACAATCACCAGTGTCATCCTCACGGTCTTaGCCATGGCTGCTGATACATGGGCTCCCTCGCTGG | + |
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Preference number: 6 (lower is better) Translates to: RQSQSPVSSSRS*PWLLIHGLPRW Trigger: CCAGCGAGGGAGCCCATGTATCAGCAGCCATGGCCAAGACCGTGAGGATGACACTGGTGATTGTGATTGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033765.8 ENSMUST00000114395.2 |
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| CDS TCA 72 bp | AAAGCAGGCTACGCAACTCCGAGGAGACACTGCTACTaGAGGAAGCATAGATCCAGGGGTTGGTACAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: KAGYATPRRHCY*RKHRSRGWYSC Trigger: ACAGCTGTACCAACCCCTGGATCTATGCTTCCTTCAGTAGCAGTGTCTCCTCGGAGTTGCGTAGCCTGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033765.8 ENSMUST00000101470.3 ENSMUST00000114395.2 |
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