Pregenerated sensors for AVPR1B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026432Ensembl transcript IDs: ENSMUST00000027690.7, ENSMUST00000190410.2
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGCTTTGCATGGAGGCTGAGGTTAAGGCTAAGACGGAGAGTAGATaGACCACAGGTGTGGGTCAGCAGTGTTGTGCGGCGGCTAGCGAG | + |
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Preference number: 1 (lower is better) Translates to: RLCMEAEVKAKTESR*TTGVGQQCCAAASE Trigger: CTCGCTAGCCGCCGCACAACACTGCTGACCCACACCTGTGGTCCATCTACTCTCCGTCTTAGCCTTAACCTCAGCCTCCATGCAAAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190410.2 |
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| 3UTR CCA 90 bp | ATCCAACCCTTGCACACTAGAGAACTGGAGAGCAGCAAACAGACATaGAGATGGGGGACAGGAGTCAGTGCTAAAGGTGCAAGGCAGGAG | + |
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Preference number: 1 (lower is better) Translates to: IQPLHTRELESSKQT*RWGTGVSAKGARQE Trigger: CTCCTGCCTTGCACCTTTAGCACTGACTCCTGTCCCCCATCTCCATGTCTGTTTGCTGCTCTCCAGTTCTCTAGTGTGCAAGGGTTGGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
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| 3UTR CCA 90 bp | TCTATTCCTTCTTCCCTCTCCCCTTTCTGGGTATCTCAGCCGCAGTaGAACATACCACTGAGAACTCACAGAGTGTTCCCACACCACCCA | + |
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Preference number: 1 (lower is better) Translates to: SIPSSLSPFWVSQPQ*NIPLRTHRVFPHHP Trigger: TGGGTGGTGTGGGAACACTCTGTGAGTTCTCAGTGGTATGTTCCACTGCGGCTGAGATACCCAGAAAGGGGAGAGGGAAGAAGGAATAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
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| 3UTR TCA 90 bp | GCTATTACCCAGTTGCAGTTTTGTAAAGCCGTAGAAGGCCAGAGCTaGGAGAGACTTCAGAATCATCTCACTGCTGATGAGGCAGGGGCC | + |
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Preference number: 1 (lower is better) Translates to: AITQLQFCKAVEGQS*ERLQNHLTADEAGA Trigger: GGCCCCTGCCTCATCAGCAGTGAGATGATTCTGAAGTCTCTCTCAGCTCTGGCCTTCTACGGCTTTACAAAACTGCAACTGGGTAATAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
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| 3UTR TCA 90 bp | AGAGGCAATGAAGGAGTGTTGCTTACTGGTTTACTCTCCATAGCTTaGTCAGCCTGCCTCTTCCTCCTCCTCTTCCTCCTCCTCTTCCTC | + |
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Preference number: 1 (lower is better) Translates to: RGNEGVLLTGLLSIA*SACLFLLLFLLLFL Trigger: GAGGAAGAGGAGGAGGAAGAGGAGGAGGAAGAGGCAGGCTGATCAAGCTATGGAGAGTAAACCAGTAAGCAACACTCCTTCATTGCCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
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| 3UTR-3UTR CCA 90 bp | CCTATGACCACTTCTCCAAGGGTGGCACTGTCCACAGTGGGCTGGGCCCTCCCATCCCTCTCCCCTTTCTaGGTATCTCAGCCGCAGTGG | + |
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Preference number: 2 (lower is better) Translates to: PMTTSPRVALSTVGWALPSLSPF*VSQPQW Trigger: CCACTGCGGCTGAGATACCCAGAAAGGGGAGAGGGA...TGGGAGGGCCCAGCCCACTGTGGACAGTGCCACCCTTGGAGAAGTGGTCATAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
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| 3UTR-3UTR CCA 90 bp | CTCCAAGGGTGGCACTGTCCACAGTGGGCTGGGCCCTCCCACATCAATTGCCTACCCGGAAAGTGGAGGTaGCTTCCCAGGGTAGAGCAA | + |
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Preference number: 2 (lower is better) Translates to: LQGWHCPQWAGPSHINCLPGKWR*LPRVEQ Trigger: TTGCTCTACCCTGGGAAGCCACCTCCACTTTCCGGG...TAGGCAATTGATGTGGGAGGGCCCAGCCCACTGTGGACAGTGCCACCCTTGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
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| 3UTR-3UTR GCA 90 bp | CTGGTCTCCATAGTGGCTTCTCCATCCACCTGCTCCAAATCCTTCAGCGAGCCCTTGGAGAGCTGCCTGTaGACTCGGGGCTTGGAACCC | + |
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Preference number: 2 (lower is better) Translates to: LVSIVASPSTCSKSFSEPLESCL*TRGLEP Trigger: GGGTTCCAAGCCCCGAGTGCACAGGCAGCTCTCCAA...GGGCTCGCTGAAGGATTTGGAGCAGGTGGATGGAGAAGCCACTATGGAGACCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190410.2 |
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| 3UTR-3UTR TCA 90 bp | CTCCAAGGGTGGCACTGTCCACAGTGGGCTGGGCCCTCCCACATCAATTGCCTAGCATTCACCTTTCCTTaGTATCTCTTCCTACCTTGG | + |
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Preference number: 2 (lower is better) Translates to: LQGWHCPQWAGPSHINCLAFTFP*YLFLPW Trigger: CCAAGGTAGGAAGAGATATCAAGGAAAGGTGAATGC...TAGGCAATTGATGTGGGAGGGCCCAGCCCACTGTGGACAGTGCCACCCTTGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
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| 3UTR-3UTR GCA 90 bp | CTCCAAGGGTGGCACTGTCCACAGTGGGCTGGGCCCTCCCACATCAATTGCCTATCTACCAGTTGGGTATaGTTATGGGTGCTTTGTCAG | + |
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Preference number: 2 (lower is better) Translates to: LQGWHCPQWAGPSHINCLSTSWV*LWVLCQ Trigger: CTGACAAAGCACCCATAAGCATACCCAACTGGTAGA...TAGGCAATTGATGTGGGAGGGCCCAGCCCACTGTGGACAGTGCCACCCTTGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
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| 3UTR-3UTR CCA 90 bp | CCTATGACCACTTCTCCAAGGGTGGCACTGTCCACAGTGGGCTGGGCCCTCCCAGAACCAGAACTGAGGTaGAAAAGTTCCCCTAAGATT | + |
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Preference number: 2 (lower is better) Translates to: PMTTSPRVALSTVGWALPEPELR*KSSPKI Trigger: AATCTTAGGGGAACTTTTCCACCTCAGTTCTGGTTC...TGGGAGGGCCCAGCCCACTGTGGACAGTGCCACCCTTGGAGAAGTGGTCATAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
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| 3UTR-3UTR GCA 90 bp | ACTCTCCATAGCTTGATCAGCCTGCCTCTTCCTCCTCCTCTTCCTCCTCCTCTTGGGTATGCTTATGGGTaGTTTGTCAGGGTGGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: TLHSLISLPLPPPLPPPLGYAYG*FVRVAG Trigger: TCCTGCCACCCTGACAAAGCACCCATAAGCATACCC...AAGAGGAGGAGGAAGAGGAGGAGGAAGAGGCAGGCTGATCAAGCTATGGAGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
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| 3UTR-3UTR TCA 90 bp | CTCCAAGGGTGGCACTGTCCACAGTGGGCTGGGCCCTCCCACATCAATTGCCTACTTGTAGATCTGCAATaGTTGCAAACCACATGTATA | + |
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Preference number: 2 (lower is better) Translates to: LQGWHCPQWAGPSHINCLLVDLQ*LQTTCI Trigger: TATACATGTGGTTTGCAATCATTGCAGATCTACAAG...TAGGCAATTGATGTGGGAGGGCCCAGCCCACTGTGGACAGTGCCACCCTTGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
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| 3UTR-3UTR CCA 90 bp | ACTCTCCATAGCTTGATCAGCCTGCCTCTTCCTCCTCCTCTTCCTCCTCCTCTTGTATCTCAGCCGCAGTaGAACATACCACTGAGAACT | + |
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Preference number: 2 (lower is better) Translates to: TLHSLISLPLPPPLPPPLVSQPQ*NIPLRT Trigger: AGTTCTCAGTGGTATGTTCCACTGCGGCTGAGATAC...AAGAGGAGGAGGAAGAGGAGGAGGAAGAGGCAGGCTGATCAAGCTATGGAGAGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
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| 3UTR-3UTR GCA 90 bp | CCCGGAAAGTGGAGGTGGCTTCCCAGGGTAGAGCAAAGATTTAAAATCTTGATTTCCCAGTGCCTGAGATaGACAGAACCAGAGTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: PGKWRWLPRVEQRFKILISQCLR*TEPESR Trigger: CCTGGACTCTGGTTCTGTGCATCTCAGGCACTGGGA...AATCAAGATTTTAAATCTTTGCTCTACCCTGGGAAGCCACCTCCACTTTCCGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
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| 3UTR-3UTR GCA 90 bp | ACTCTCCATAGCTTGATCAGCCTGCCTCTTCCTCCTCCTCTTCCTCCTCCTCTTAGTACATCCAACCCTTaGACACTAGAGAACTGGAGA | + |
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Preference number: 2 (lower is better) Translates to: TLHSLISLPLPPPLPPPLSTSNP*TLENWR Trigger: TCTCCAGTTCTCTAGTGTGCAAGGGTTGGATGTACT...AAGAGGAGGAGGAAGAGGAGGAGGAAGAGGCAGGCTGATCAAGCTATGGAGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
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| 3UTR-3UTR CCA 90 bp | CACAGAGTGTTCCCACACCACCCATCCTGTGGTAAGGGTGATGGGGAGAAGAGCACTATATCTACCAGTTaGGTATGCTTATGGGTGCTT | + |
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Preference number: 2 (lower is better) Translates to: HRVFPHHPSCGKGDGEKSTISTS*VCLWVL Trigger: AAGCACCCATAAGCATACCCAACTGGTAGATATAGT...GCTCTTCTCCCCATCACCCTTACCACAGGATGGGTGGTGTGGGAACACTCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
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| 3UTR CAA 90 bp | GGAGGACTCACCAATACAGAACTGAAGTCAGAGTACATCCAACCCTaGCACACTAGAGAACTGGAGAGCAGCAAACAGACATGGAGATGG | + |
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Preference number: 2 (lower is better) Translates to: GGLTNTELKSEYIQP*HTRELESSKQTWRW Trigger: CCATCTCCATGTCTGTTTGCTGCTCTCCAGTTCTCTAGTGTGCAAGGGTTGGATGTACTCTGACTTCAGTTCTGTATTGGTGAGTCCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
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| 3UTR-3UTR TCA 90 bp | CTGGAGATATTAGGGAGAATGGGGCAAGGCCCTAGCATTCACCTTTCCTTGATACCTCTTTCTCTGTCCTaGGACTTCTGTTGCCAAAGC | + |
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Preference number: 2 (lower is better) Translates to: LEILGRMGQGPSIHLSLIPLSLS*DFCCQS Trigger: GCTTTGGCAACAGAAGTCTCAGGACAGAGAAAGAGG...TATCAAGGAAAGGTGAATGCTAGGGCCTTGCCCCATTCTCCCTAATATCTCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
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| 3UTR CAA 90 bp | GAGATATTAGGGAGAATGGGGCAAGGCCCTAGCATTCACCTTTCCTaGATATCTCTTCCTACCTTGGAGGAGGACTCACCAATACAGAAC | + |
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Preference number: 2 (lower is better) Translates to: EILGRMGQGPSIHLS*ISLPTLEEDSPIQN Trigger: GTTCTGTATTGGTGAGTCCTCCTCCAAGGTAGGAAGAGATATCAAGGAAAGGTGAATGCTAGGGCCTTGCCCCATTCTCCCTAATATCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
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| 3UTR-3UTR TCA 90 bp | CTGGAGATATTAGGGAGAATGGGGCAAGGCCCTAGCATTCACCTTTCCTTGATAGTAGAAGGCCAGAGCTaGGAGAGACTTCAGAATCAT | + |
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Preference number: 2 (lower is better) Translates to: LEILGRMGQGPSIHLSLIVEGQS*ERLQNH Trigger: ATGATTCTGAAGTCTCTCTCAGCTCTGGCCTTCTAC...TATCAAGGAAAGGTGAATGCTAGGGCCTTGCCCCATTCTCCCTAATATCTCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
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| 3UTR-3UTR GCA 90 bp | CCCGGAAAGTGGAGGTGGCTTCCCAGGGTAGAGCAAAGATTTAAAATCTTGATTAGTCCGTATTCCCAGTaGCTGAGATGCACAGAACCA | + |
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Preference number: 2 (lower is better) Translates to: PGKWRWLPRVEQRFKILISPYSQ*LRCTEP Trigger: TGGTTCTGTGCATCTCAGGCACTGGGAATACGGACT...AATCAAGATTTTAAATCTTTGCTCTACCCTGGGAAGCCACCTCCACTTTCCGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
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| 3UTR CAA 90 bp | AGTATCTTTGCAAAGCCACAGACACTCTTTGAAGCATCCCTAGGATaGAGCAGAGTGAGGCTGTTCCCAGGAATTTTGCTCCAAAGCTTG | + |
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Preference number: 2 (lower is better) Translates to: SIFAKPQTLFEASLG*SRVRLFPGILLQSL Trigger: CAAGCTTTGGAGCAAAATTCCTGGGAACAGCCTCACTCTGCTCAATCCTAGGGATGCTTCAAAGAGTGTCTGTGGCTTTGCAAAGATACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
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| 3UTR-3UTR TCA 90 bp | CCCGGAAAGTGGAGGTGGCTTCCCAGGGTAGAGCAAAGATTTAAAATCTTGATTAGTCAAGTAATGAGATaGGTCTCTGCATTGACAGTA | + |
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Preference number: 2 (lower is better) Translates to: PGKWRWLPRVEQRFKILISQVMR*VSALTV Trigger: TACTGTCAATGCAGAGACTCATCTCATTACTTGACT...AATCAAGATTTTAAATCTTTGCTCTACCCTGGGAAGCCACCTCCACTTTCCGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
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| 3UTR-3UTR GCA 90 bp | AGTCGTTATGGAAATGAAACAATTCTAAGAGCCCATTGGTTAGAACACCCTTTGAAGTCTGTTCCACACTaGCCCAGAGGAAGGAAGTCT | + |
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Preference number: 2 (lower is better) Translates to: SRYGNETILRAHWLEHPLKSVPH*PRGRKS Trigger: AGACTTCCTTCCTCTGGGGCAGTGTGGAACAGACTT...CAAAGGGTGTTCTAACCAATGGGCTCTTAGAATTGTTTCATTTCCATAACGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
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| 3UTR-3UTR CCA 90 bp | CCCGGAAAGTGGAGGTGGCTTCCCAGGGTAGAGCAAAGATTTAAAATCTTGATTAAAATTAAGAGAGAATaGTCCATACCCACACTAAGC | + |
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Preference number: 2 (lower is better) Translates to: PGKWRWLPRVEQRFKILIKIKRE*SIPTLS Trigger: GCTTAGTGTGGGTATGGACCATTCTCTCTTAATTTT...AATCAAGATTTTAAATCTTTGCTCTACCCTGGGAAGCCACCTCCACTTTCCGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
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| 3UTR-3UTR TCA 90 bp | AGTCGTTATGGAAATGAAACAATTCTAAGAGCCCATTGGTTAGAACACCCTTTGGATGAGTCTCTGCATTaGCAGTACCATCTAAGCTGT | + |
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Preference number: 2 (lower is better) Translates to: SRYGNETILRAHWLEHPLDESLH*QYHLSC Trigger: ACAGCTTAGATGGTACTGTCAATGCAGAGACTCATC...CAAAGGGTGTTCTAACCAATGGGCTCTTAGAATTGTTTCATTTCCATAACGACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
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| 3UTR CAA 90 bp | CTCTACACTCTCCTATACACTCTTACCTTCTCCTTTTCTAAGCCTTaGCCTTTTTGCATTAACTGTTGTTACATACATATATGTACATGT | + |
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Preference number: 2 (lower is better) Translates to: LYTLLYTLTFSFSKP*PFCINCCYIHICTC Trigger: ACATGTACATATATGTATGTAACAACAGTTAATGCAAAAAGGCAAAGGCTTAGAAAAGGAGAAGGTAAGAGTGTATAGGAGAGTGTAGAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
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| 3UTR GCA 72 bp | CGGCGGCTAGCGAGGCTGCTGTTGGAGAGCTGCCTGTaGACTCGGGGCTTGGAACCCCTGCAGCAGGCGCGG | + |
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Preference number: 3 (lower is better) Translates to: RRLARLLLESCL*TRGLEPLQQAR Trigger: CCGCGCCTGCTGCAGGGGTTCCAAGCCCCGAGTGCACAGGCAGCTCTCCAACAGCAGCCTCGCTAGCCGCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190410.2 |
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| 3UTR-3UTR CAA 90 bp | AAGGCTAAGACGGAGAGTAGATGGACCACAGGTGTGGGTCAGCAGTGTTGTGCGCTAGCGAGGCTGCTGTaGGAGAGCTGCCTGTGCACT | + |
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Preference number: 3 (lower is better) Translates to: KAKTESRWTTGVGQQCCALARLL*ESCLCT Trigger: AGTGCACAGGCAGCTCTCCAACAGCAGCCTCGCTAG...CGCACAACACTGCTGACCCACACCTGTGGTCCATCTACTCTCCGTCTTAGCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190410.2 |
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| 3UTR CCA 72 bp | TTAAGGCTAAGACGGAGAGTAGATGGACCACAGGTGTaGGTCAGCAGTGTTGTGCGGCGGCTAGCGAGGCTG | + |
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Preference number: 3 (lower is better) Translates to: LRLRRRVDGPQV*VSSVVRRLARL Trigger: CAGCCTCGCTAGCCGCCGCACAACACTGCTGACCCACACCTGTGGTCCATCTACTCTCCGTCTTAGCCTTAA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190410.2 |
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| 3UTR CCA 72 bp | ATGGAGGCTGAGGTTAAGGCTAAGACGGAGAGTAGATaGACCACAGGTGTGGGTCAGCAGTGTTGTGCGGCG | + |
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Preference number: 3 (lower is better) Translates to: MEAEVKAKTESR*TTGVGQQCCAA Trigger: CGCCGCACAACACTGCTGACCCACACCTGTGGTCCATCTACTCTCCGTCTTAGCCTTAACCTCAGCCTCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190410.2 |
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| 3UTR GCA 72 bp | TCTACCATCCCTGAGCCACCTAGTCCGTATTCCCAGTaGCTGAGATGCACAGAACCAGAGTCCAGGGACTCT | + |
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Preference number: 3 (lower is better) Translates to: STIPEPPSPYSQ*LRCTEPESRDS Trigger: AGAGTCCCTGGACTCTGGTTCTGTGCATCTCAGGCACTGGGAATACGGACTAGGTGGCTCAGGGATGGTAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
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| 3UTR-3UTR CAA 90 bp | CTCCAAGGGTGGCACTGTCCACAGTGGGCTGGGCCCTCCCACATCAATTGCCTACACTATATCTACCAGTaGGGTATGCTTATGGGTGCT | + |
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Preference number: 3 (lower is better) Translates to: LQGWHCPQWAGPSHINCLHYIYQ*GMLMGA Trigger: AGCACCCATAAGCATACCCAACTGGTAGATATAGTG...TAGGCAATTGATGTGGGAGGGCCCAGCCCACTGTGGACAGTGCCACCCTTGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
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| 3UTR-3UTR CAA 90 bp | CCTATGACCACTTCTCCAAGGGTGGCACTGTCCACAGTGGGCTGGGCCCTCCCAAGCATTCACCTTTCCTaGATATCTCTTCCTACCTTG | + |
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Preference number: 3 (lower is better) Translates to: PMTTSPRVALSTVGWALPSIHLS*ISLPTL Trigger: CAAGGTAGGAAGAGATATCAAGGAAAGGTGAATGCT...TGGGAGGGCCCAGCCCACTGTGGACAGTGCCACCCTTGGAGAAGTGGTCATAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
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| 3UTR CCA 72 bp | TCTTCCCTCTCCCCTTTCTGGGTATCTCAGCCGCAGTaGAACATACCACTGAGAACTCACAGAGTGTTCCCA | + |
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Preference number: 3 (lower is better) Translates to: SSLSPFWVSQPQ*NIPLRTHRVFP Trigger: TGGGAACACTCTGTGAGTTCTCAGTGGTATGTTCCACTGCGGCTGAGATACCCAGAAAGGGGAGAGGGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
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| 3UTR CCA 72 bp | ATCATCTCACTGCTGATGAGGCAGGGGCCCGGAAAGTaGAGGTGGCTTCCCAGGGTAGAGCAAAGATTTAAA | + |
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Preference number: 3 (lower is better) Translates to: IISLLMRQGPGK*RWLPRVEQRFK Trigger: TTTAAATCTTTGCTCTACCCTGGGAAGCCACCTCCACTTTCCGGGCCCCTGCCTCATCAGCAGTGAGATGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
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| 3UTR CCA 72 bp | AAATCCTTCAGCGAGCCCGCAGGCTTAGGCTTTGCATaGAGGCTGAGGTTAAGGCTAAGACGGAGAGTAGAT | + |
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Preference number: 3 (lower is better) Translates to: KSFSEPAGLGFA*RLRLRLRRRVD Trigger: ATCTACTCTCCGTCTTAGCCTTAACCTCAGCCTCCATGCAAAGCCTAAGCCTGCGGGCTCGCTGAAGGATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190410.2 |
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| 3UTR-3UTR CAA 90 bp | AGGCTCATCGTCTTACTGACAGTGGTCACAGCTAGGACAGAGTCAGGACCCAGCAATTTTAGCTTTCCCTaGGAACCAGAACTGAGGTGG | + |
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Preference number: 3 (lower is better) Translates to: RLIVLLTVVTARTESGPSNFSFP*EPELRW Trigger: CCACCTCAGTTCTGGTTCCAAGGGAAAGCTAAAATT...GCTGGGTCCTGACTCTGTCCTAGCTGTGACCACTGTCAGTAAGACGATGAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
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| 3UTR TCA 72 bp | CTCTTATACCTGAGACATCCAGGCTCATCGTCTTACTaGCAGTGGTCACAGCTAGGACAGAGTCAGGACCCA | + |
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Preference number: 3 (lower is better) Translates to: LLYLRHPGSSSY*QWSQLGQSQDP Trigger: TGGGTCCTGACTCTGTCCTAGCTGTGACCACTGTCAGTAAGACGATGAGCCTGGATGTCTCAGGTATAAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
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| 3UTR TCA 72 bp | AGCAGGAACTCCAGGCAAGAACCTGAAGGCAGGAACTaGAGCAGAGGCAATGAAGGAGTGTTGCTTACTGGT | + |
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Preference number: 3 (lower is better) Translates to: SRNSRQEPEGRN*SRGNEGVLLTG Trigger: ACCAGTAAGCAACACTCCTTCATTGCCTCTGCTTCAGTTCCTGCCTTCAGGTTCTTGCCTGGAGTTCCTGCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
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| 3UTR CCA 72 bp | AGTCAGAGTACATCCAACCCTTGCACACTAGAGAACTaGAGAGCAGCAAACAGACATGGAGATGGGGGACAG | + |
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Preference number: 3 (lower is better) Translates to: SQSTSNPCTLEN*RAANRHGDGGQ Trigger: CTGTCCCCCATCTCCATGTCTGTTTGCTGCTCTCCAGTTCTCTAGTGTGCAAGGGTTGGATGTACTCTGACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
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| 3UTR TCA 72 bp | TCTTTCTCTGTCCTGAGACTTCTGTTGCCAAAGCCATaGCAGGACCTACCAGAACTGAGGTCAGGTGTATAC | + |
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Preference number: 3 (lower is better) Translates to: SFSVLRLLLPKP*QDLPELRSGVY Trigger: GTATACACCTGACCTCAGTTCTGGTAGGTCCTGTCATGGCTTTGGCAACAGAAGTCTCAGGACAGAGAAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
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| 3UTR-3UTR CAA 90 bp | CCCGGAAAGTGGAGGTGGCTTCCCAGGGTAGAGCAAAGATTTAAAATCTTGATTTATTCTCTCCTCTCCTaGTTCCACTGCGATGCACCA | + |
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Preference number: 3 (lower is better) Translates to: PGKWRWLPRVEQRFKILIYSLLS*FHCDAP Trigger: TGGTGCATCGCAGTGGAACAAGGAGAGGAGAGAATA...AATCAAGATTTTAAATCTTTGCTCTACCCTGGGAAGCCACCTCCACTTTCCGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
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| 3UTR TCA 72 bp | CAGTTGCAGTTTTGTAAAGCCGTAGAAGGCCAGAGCTaGGAGAGACTTCAGAATCATCTCACTGCTGATGAG | + |
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Preference number: 3 (lower is better) Translates to: QLQFCKAVEGQS*ERLQNHLTADE Trigger: CTCATCAGCAGTGAGATGATTCTGAAGTCTCTCTCAGCTCTGGCCTTCTACGGCTTTACAAAACTGCAACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
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| 3UTR GCA 72 bp | GGAAAGTATTTATTTCATCTTATAATTCACAGGTCATaGGCCATCACTGCAAGAAGTCAGAGCAGGAACTCC | + |
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Preference number: 3 (lower is better) Translates to: GKYLFHLIIHRS*AITARSQSRNS Trigger: GGAGTTCCTGCTCTGACTTCTTGCAGTGATGGCGCATGACCTGTGAATTATAAGATGAAATAAATACTTTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
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| 3UTR CAA 72 bp | GTCAGCAGTGTTGTGCGGCGGCTAGCGAGGCTGCTGTaGGAGAGCTGCCTGTGCACTCGGGGCTTGGAACCC | + |
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Preference number: 4 (lower is better) Translates to: VSSVVRRLARLL*ESCLCTRGLEP Trigger: GGGTTCCAAGCCCCGAGTGCACAGGCAGCTCTCCAACAGCAGCCTCGCTAGCCGCCGCACAACACTGCTGAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190410.2 |
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| CDS-3UTR TCA 90 bp | CCTATGACCACTTCTCCAAGGGTGGCACTGTCCACAGTGGGCTGGGCCCTCCCAACACTTGAGGGAGGCTaGGGATGGCAGCCAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PMTTSPRVALSTVGWALPTLEGG*GWQPAA Trigger: GGCTGCTGGCTGCCATCCTCAGCCTCCCTCAAGTGT...TGGGAGGGCCCAGCCCACTGTGGACAGTGCCACCCTTGGAGAAGTGGTCATAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
||
| CDS-3UTR TCA 90 bp | CCTATGACCACTTCTCCAAGGGTGGCACTGTCCACAGTGGGCTGGGCCCTCCCAAGGCTTCGAAGAGGGTaGCAGACAGCCAGGTACCGG | + |
|
Preference number: 4 (lower is better) Translates to: PMTTSPRVALSTVGWALPRLRRG*QTARYR Trigger: CCGGTACCTGGCTGTCTGTCACCCTCTTCGAAGCCT...TGGGAGGGCCCAGCCCACTGTGGACAGTGCCACCCTTGGAGAAGTGGTCATAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
||
| CDS-3UTR GCA 90 bp | GCGGCTAGCGAGGCTGCTGTTGGAGAGCTGCCTGTGCACTCGGGGCTTGGAACCTGCAGCACGAACAGATaGATGCGGGAGCGCTTATGG | + |
|
Preference number: 4 (lower is better) Translates to: AASEAAVGELPVHSGLGTCSTNR*MRERLW Trigger: CCATAAGCGCTCCCGCATGCATCTGTTCGTGCTGCA...GGTTCCAAGCCCCGAGTGCACAGGCAGCTCTCCAACAGCAGCCTCGCTAGCCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190410.2 |
||
| CDS-3UTR TCA 90 bp | CACAGAGTGTTCCCACACCACCCATCCTGTGGTAAGGGTGATGGGGAGAAGAGCCTGCAGCAGGCGCGGTaGCTCAGGGAACGTGGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: HRVFPHHPSCGKGDGEKSLQQAR*LRERGN Trigger: GTTGCCACGTTCCCTGAGTCACCGCGCCTGCTGCAG...GCTCTTCTCCCCATCACCCTTACCACAGGATGGGTGGTGTGGGAACACTCTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
||
| CDS-3UTR TCA 90 bp | ACAGCTAGGACAGAGTCAGGACCCAGCCCTCCTGACCTGATACTTGCTGGTACGAGCAGCGGCAGAAGATaGGGACTTGGGCCAGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: TARTESGPSPPDLILAGTSSGRR*GLGPAP Trigger: AGGGGCTGGCCCAAGTCCTCATCTTCTGCCGCTGCT...CGTACCAGCAAGTATCAGGTCAGGAGGGCTGGGTCCTGACTCTGTCCTAGCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
||
| CDS-3UTR GCA 90 bp | ACCACAGGTGTGGGTCAGCAGTGTTGTGCGGCGGCTAGCGAGGCTGCTGTTGGAGTAGTACAGCCAGGTTaGCTCCTGTGGCCAGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: TTGVGQQCCAAASEAAVGVVQPG*LLWPEP Trigger: TGGTTCTGGCCACAGGAGGCAACCTGGCTGTACTAC...TCCAACAGCAGCCTCGCTAGCCGCCGCACAACACTGCTGACCCACACCTGTGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190410.2 |
||
| CDS-3UTR TCA 90 bp | CTCCAAGGGTGGCACTGTCCACAGTGGGCTGGGCCCTCCCACATCAATTGCCTAATGTCCCAGAGCAGCTaGGGCAGTACCTGGAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LQGWHCPQWAGPSHINCLMSQSS*GSTWKS Trigger: GCTTTTCCAGGTACTGCCTCAGCTGCTCTGGGACAT...TAGGCAATTGATGTGGGAGGGCCCAGCCCACTGTGGACAGTGCCACCCTTGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
||
| CDS-3UTR TCA 90 bp | ACCACAGGTGTGGGTCAGCAGTGTTGTGCGGCGGCTAGCGAGGCTGCTGTTGGAGCAACAGGTGGCTGTTaGAGCCCATATAGATCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TTGVGQQCCAAASEAAVGATGGC*SPYRSR Trigger: CCTGGATCTATATGGGCTTCAACAGCCACCTGTTGC...TCCAACAGCAGCCTCGCTAGCCGCCGCACAACACTGCTGACCCACACCTGTGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190410.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGTGTTGTGCGGCGGCTAGCGAGGCTGCTGTTGGAGAGCTGCCTGTGCACTTACCCAGCCAGGGTGTaGTGGTATTGGGGACAAACA | + |
|
Preference number: 4 (lower is better) Translates to: SSVVRRLARLLLESCLCTYPARV*WYWGQT Trigger: TGTTTGTCCCCAATACCACCACACCCTGGCTGGGTA...AGTGCACAGGCAGCTCTCCAACAGCAGCCTCGCTAGCCGCCGCACAACACTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190410.2 |
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| CDS-3UTR GCA 90 bp | CCAGCTACTCTGGCCTCACCCTGCCTCAAACTAAGCTCTACTTTCTACCATCCCGTGGACTGGCTGGGCTaGTGGAGGCTTCGAAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PATLASPCLKLSSTFYHPVDWLG*WRLRRG Trigger: CCCTCTTCGAAGCCTCCAGCAGCCCAGCCAGTCCAC...GGGATGGTAGAAAGTAGAGCTTAGTTTGAGGCAGGGTGAGGCCAGAGTAGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
||
| CDS-3UTR GCA 90 bp | TCCCACACCACCCATCCTGTGGTAAGGGTGATGGGGAGAAGAGCCAGCATTTACTTGGAGAGCTGCCTGTaGACTCGGGGCTTGGAACCC | + |
|
Preference number: 4 (lower is better) Translates to: SHTTHPVVRVMGRRASIYLESCL*TRGLEP Trigger: GGGTTCCAAGCCCCGAGTGCACAGGCAGCTCTCCAA...GTAAATGCTGGCTCTTCTCCCCATCACCCTTACCACAGGATGGGTGGTGTGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
||
| CDS-3UTR GCA 90 bp | CTCCAAGGGTGGCACTGTCCACAGTGGGCTGGGCCCTCCCACATCAATTGCCTACGCAGGCTTAGGCTTTaGATGGAGGCTGAGGTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: LQGWHCPQWAGPSHINCLRRLRL*MEAEVK Trigger: CTTAACCTCAGCCTCCATGCAAAGCCTAAGCCTGCG...TAGGCAATTGATGTGGGAGGGCCCAGCCCACTGTGGACAGTGCCACCCTTGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
||
| CDS-3UTR CCA 90 bp | CACAGAGTGTTCCCACACCACCCATCCTGTGGTAAGGGTGATGGGGAGAAGAGCGATGGACCACAGGTGTaGGTCAGCAGTGTTGTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: HRVFPHHPSCGKGDGEKSDGPQV*VSSVVR Trigger: CCGCACAACACTGCTGACCCACACCTGTGGTCCATC...GCTCTTCTCCCCATCACCCTTACCACAGGATGGGTGGTGTGGGAACACTCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
||
| CDS-3UTR TCA 90 bp | CCTATGACCACTTCTCCAAGGGTGGCACTGTCCACAGTGGGCTGGGCCCTCCCATGCCAGCCTGTGTCTTaGCTTTCAGGTTCTTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: PMTTSPRVALSTVGWALPCQPVS*LSGSCR Trigger: TCTACAAGAACCTGAAAGTCAAGACACAGGCTGGCA...TGGGAGGGCCCAGCCCACTGTGGACAGTGCCACCCTTGGAGAAGTGGTCATAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
||
| CDS-3UTR TCA 90 bp | CTGGAGATATTAGGGAGAATGGGGCAAGGCCCTAGCATTCACCTTTCCTTGATAGCAGTCCAGCACCCCTaGGCCCTGGATCACCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LEILGRMGQGPSIHLSLIAVQHP*ALDHLS Trigger: CGAGAGGTGATCCAGGGCTCAGGGGTGCTGGACTGC...TATCAAGGAAAGGTGAATGCTAGGGCCTTGCCCCATTCTCCCTAATATCTCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
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| CDS-3UTR CCA 90 bp | TCCAACCCTTGCACACTAGAGAACTGGAGAGCAGCAAACAGACATGGAGATGGGGGTAGGTGGACTGGCTaGGCTGCTGGAGGCTTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: SNPCTLENWRAANRHGDGGRWTG*AAGGFE Trigger: TTCGAAGCCTCCAGCAGCCCAGCCAGTCCACCTACC...CCCATCTCCATGTCTGTTTGCTGCTCTCCAGTTCTCTAGTGTGCAAGGGTTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
||
| CDS-3UTR TCA 90 bp | CACAGAGTGTTCCCACACCACCCATCCTGTGGTAAGGGTGATGGGGAGAAGAGCTGTAGGCCAGCACAATaGCAAAGGTCATCTTCACGG | + |
|
Preference number: 4 (lower is better) Translates to: HRVFPHHPSCGKGDGEKSCRPAQ*QRSSSR Trigger: CCGTGAAGATGACCTTTGTCATTGTGCTGGCCTACA...GCTCTTCTCCCCATCACCCTTACCACAGGATGGGTGGTGTGGGAACACTCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
||
| CDS-3UTR GCA 90 bp | CCAGCTACTCTGGCCTCACCCTGCCTCAAACTAAGCTCTACTTTCTACCATCCCGTAGTACAGCCAGGTTaGCTCCTGTGGCCAGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: PATLASPCLKLSSTFYHPVVQPG*LLWPEP Trigger: TGGTTCTGGCCACAGGAGGCAACCTGGCTGTACTAC...GGGATGGTAGAAAGTAGAGCTTAGTTTGAGGCAGGGTGAGGCCAGAGTAGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
||
| CDS-3UTR GCA 90 bp | TCCCACACCACCCATCCTGTGGTAAGGGTGATGGGGAGAAGAGCCAGCATTTACGCTTCTCCATCCACCTaGTCCAAATCCTTCAGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: SHTTHPVVRVMGRRASIYASPST*SKSFSE Trigger: CTCGCTGAAGGATTTGGAGCAGGTGGATGGAGAAGC...GTAAATGCTGGCTCTTCTCCCCATCACCCTTACCACAGGATGGGTGGTGTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
||
| CDS-3UTR CCA 90 bp | ACTCTCCATAGCTTGATCAGCCTGCCTCTTCCTCCTCCTCTTCCTCCTCCTCTTGAGCGCTTATGGCCCTaGAGGCCCAGAATCAGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: TLHSLISLPLPPPLPPPLERLWP*RPRISS Trigger: ACTACTGATTCTGGGCCTCCAGGGCCATAAGCGCTC...AAGAGGAGGAGGAAGAGGAGGAGGAAGAGGCAGGCTGATCAAGCTATGGAGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
||
| CDS-3UTR CCA 90 bp | CCAGCTACTCTGGCCTCACCCTGCCTCAAACTAAGCTCTACTTTCTACCATCCCTACCCAGCCAGGGTGTaGTGGTATTGGGGACAAACA | + |
|
Preference number: 4 (lower is better) Translates to: PATLASPCLKLSSTFYHPYPARV*WYWGQT Trigger: TGTTTGTCCCCAATACCACCACACCCTGGCTGGGTA...GGGATGGTAGAAAGTAGAGCTTAGTTTGAGGCAGGGTGAGGCCAGAGTAGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
||
| 3UTR CAA 72 bp | GGGAGAATGGGGCAAGGCCCTAGCATTCACCTTTCCTaGATATCTCTTCCTACCTTGGAGGAGGACTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: GRMGQGPSIHLS*ISLPTLEEDSP Trigger: TGGTGAGTCCTCCTCCAAGGTAGGAAGAGATATCAAGGAAAGGTGAATGCTAGGGCCTTGCCCCATTCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
||
| CDS-3UTR CCA 90 bp | GTCTCCATAGTGGCTTCTCCATCCACCTGCTCCAAATCCTTCAGCGAGCCCGCATACCAATTTCCACCTTaGCTAGCTCTTCATCCCTAC | + |
|
Preference number: 4 (lower is better) Translates to: VSIVASPSTCSKSFSEPAYQFPP*LALHPY Trigger: GTAGGGATGAAGAGCTAGCCAAGGTGGAAATTGGTA...TGCGGGCTCGCTGAAGGATTTGGAGCAGGTGGATGGAGAAGCCACTATGGAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190410.2 |
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| CDS-3UTR CCA 90 bp | TCCAACCCTTGCACACTAGAGAACTGGAGAGCAGCAAACAGACATGGAGATGGGCAGAAGATGAGGACTTaGGCCAGCCCCTTCTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SNPCTLENWRAANRHGDGQKMRT*ASPFFP Trigger: AGGAAAGAAGGGGCTGGCCCAAGTCCTCATCTTCTG...CCCATCTCCATGTCTGTTTGCTGCTCTCCAGTTCTCTAGTGTGCAAGGGTTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
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| CDS-3UTR CCA 90 bp | CCCGGAAAGTGGAGGTGGCTTCCCAGGGTAGAGCAAAGATTTAAAATCTTGATTAGCACCCCTGAGCCCTaGATCACCTCTCGCAACGAA | + |
|
Preference number: 4 (lower is better) Translates to: PGKWRWLPRVEQRFKILISTPEP*ITSRNE Trigger: TTCGTTGCGAGAGGTGATCCAGGGCTCAGGGGTGCT...AATCAAGATTTTAAATCTTTGCTCTACCCTGGGAAGCCACCTCCACTTTCCGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
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| CDS-3UTR GCA 90 bp | GGTGAGTGTGGCCGGAAGTCCCATTTACCCATCCTCCTTTCTAATAATCTATTCTGCAGCACGAACAGATaGATGCGGGAGCGCTTATGG | + |
|
Preference number: 4 (lower is better) Translates to: GECGRKSHLPILLSNNLFCSTNR*MRERLW Trigger: CCATAAGCGCTCCCGCATGCATCTGTTCGTGCTGCA...GAATAGATTATTAGAAAGGAGGATGGGTAAATGGGACTTCCGGCCACACTCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
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| CDS-3UTR GCA 90 bp | GGTGAGTGTGGCCGGAAGTCCCATTTACCCATCCTCCTTTCTAATAATCTATTCTCGGTCAGGGCCAAGTaGAGCACGAACAGATGCATG | + |
|
Preference number: 4 (lower is better) Translates to: GECGRKSHLPILLSNNLFSVRAK*STNRCM Trigger: CATGCATCTGTTCGTGCTGCACTTGGCCCTGACCGA...GAATAGATTATTAGAAAGGAGGATGGGTAAATGGGACTTCCGGCCACACTCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
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| CDS-3UTR TCA 90 bp | GGTGAGTGTGGCCGGAAGTCCCATTTACCCATCCTCCTTTCTAATAATCTATTCGCAACAGGTGGCTGTTaGAGCCCATATAGATCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GECGRKSHLPILLSNNLFATGGC*SPYRSR Trigger: CCTGGATCTATATGGGCTTCAACAGCCACCTGTTGC...GAATAGATTATTAGAAAGGAGGATGGGTAAATGGGACTTCCGGCCACACTCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
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| CDS-3UTR GCA 90 bp | CCCGGAAAGTGGAGGTGGCTTCCCAGGGTAGAGCAAAGATTTAAAATCTTGATTGGAAAAGTAGAAATCTaGCCAGCAGTCCAGCACCCC | + |
|
Preference number: 4 (lower is better) Translates to: PGKWRWLPRVEQRFKILIGKVEI*PAVQHP Trigger: GGGGTGCTGGACTGCTGGGCAGATTTCTACTTTTCC...AATCAAGATTTTAAATCTTTGCTCTACCCTGGGAAGCCACCTCCACTTTCCGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
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| CDS-3UTR CCA 90 bp | CTGGAGATATTAGGGAGAATGGGGCAAGGCCCTAGCATTCACCTTTCCTTGATAGGCTTAGGCTTTGCATaGAGGCTGAGGTTAAGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: LEILGRMGQGPSIHLSLIGLGFA*RLRLRL Trigger: TAGCCTTAACCTCAGCCTCCATGCAAAGCCTAAGCC...TATCAAGGAAAGGTGAATGCTAGGGCCTTGCCCCATTCTCCCTAATATCTCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
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| CDS-3UTR GCA 90 bp | CCCGGAAAGTGGAGGTGGCTTCCCAGGGTAGAGCAAAGATTTAAAATCTTGATTCACGGTTCGGATCTTTaGCCTGGAGATGGTACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: PGKWRWLPRVEQRFKILIHGSDL*PGDGTD Trigger: ATCAGTACCATCTCCAGGGCAAAGATCCGAACCGTG...AATCAAGATTTTAAATCTTTGCTCTACCCTGGGAAGCCACCTCCACTTTCCGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
||
| CDS-3UTR GCA 90 bp | CCCGGAAAGTGGAGGTGGCTTCCCAGGGTAGAGCAAAGATTTAAAATCTTGATTGACACTGAAGAAAGGTaGCCAGCAAGCAATGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PGKWRWLPRVEQRFKILIDTEER*PASNVG Trigger: GCCTACATTGCTTGCTGGGCACCTTTCTTCAGTGTC...AATCAAGATTTTAAATCTTTGCTCTACCCTGGGAAGCCACCTCCACTTTCCGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
||
| CDS-3UTR CCA 90 bp | CCCGGAAAGTGGAGGTGGCTTCCCAGGGTAGAGCAAAGATTTAAAATCTTGATTTACCAATTTCCACCTTaGCTAGCTCTTCATCCCTAC | + |
|
Preference number: 4 (lower is better) Translates to: PGKWRWLPRVEQRFKILIYQFPP*LALHPY Trigger: GTAGGGATGAAGAGCTAGCCAAGGTGGAAATTGGTA...AATCAAGATTTTAAATCTTTGCTCTACCCTGGGAAGCCACCTCCACTTTCCGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
||
| 3UTR CAA 72 bp | ACCAATACAGAACTGAAGTCAGAGTACATCCAACCCTaGCACACTAGAGAACTGGAGAGCAGCAAACAGACA | + |
|
Preference number: 4 (lower is better) Translates to: TNTELKSEYIQP*HTRELESSKQT Trigger: TGTCTGTTTGCTGCTCTCCAGTTCTCTAGTGTGCAAGGGTTGGATGTACTCTGACTTCAGTTCTGTATTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
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| CDS-3UTR CCA 90 bp | AGTCGTTATGGAAATGAAACAATTCTAAGAGCCCATTGGTTAGAACACCCTTTGGTGACTCAGGGAACGTaGCAACAGGTGGCTGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SRYGNETILRAHWLEHPLVTQGT*QQVAVE Trigger: TTCAACAGCCACCTGTTGCCACGTTCCCTGAGTCAC...CAAAGGGTGTTCTAACCAATGGGCTCTTAGAATTGTTTCATTTCCATAACGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
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| CDS GCA 90 bp | GGCTGCTGTTGGAGAGCTGCCTGTGCACTCGGGGCTTGGAACCCCTaGAGCAGGCGCGGTGACTCAGGGAACGTGGCAACAGGTGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: GCCWRAACALGAWNP*SRRGDSGNVATGGC Trigger: ACAGCCACCTGTTGCCACGTTCCCTGAGTCACCGCGCCTGCTGCAGGGGTTCCAAGCCCCGAGTGCACAGGCAGCTCTCCAACAGCAGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
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| CDS GCA 90 bp | AGCGCCACGCCCAGGTCGGTCAGGGCCAAGTGCAGCACGAACAGATaGATGCGGGAGCGCTTATGGCCCTGGAGGCCCAGAATCAGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: SATPRSVRAKCSTNR*MRERLWPWRPRISS Trigger: ACTACTGATTCTGGGCCTCCAGGGCCATAAGCGCTCCCGCATGCATCTGTTCGTGCTGCACTTGGCCCTGACCGACCTGGGCGTGGCGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027690.7 ENSMUST00000190410.2 |
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| CDS-3UTR CAA 90 bp | GCTAGCGAGGCTGCTGTTGGAGAGCTGCCTGTGCACTCGGGGCTTGGAACCCCTCAGGGTGTGGTGGTATaGGGGACAAACAGGGTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: ASEAAVGELPVHSGLGTPQGVVV*GTNRVP Trigger: GGGCACCCTGTTTGTCCCCAATACCACCACACCCTG...AGGGGTTCCAAGCCCCGAGTGCACAGGCAGCTCTCCAACAGCAGCCTCGCTAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000190410.2 |
||
| CDS GCA 90 bp | CCACGCCCAGGTCGGTCAGGGCCAAGTGCAGCACGAACAGATGCATaGGGGAGCGCTTATGGCCCTGGAGGCCCAGAATCAGTAGTACAG | + |
|
Preference number: 5 (lower is better) Translates to: PRPGRSGPSAARTDA*GSAYGPGGPESVVQ Trigger: CTGTACTACTGATTCTGGGCCTCCAGGGCCATAAGCGCTCCCGCATGCATCTGTTCGTGCTGCACTTGGCCCTGACCGACCTGGGCGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027690.7 ENSMUST00000190410.2 |
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| CDS CCA 90 bp | GCCAAGTGCAGCACGAACAGATGCATGCGGGAGCGCTTATGGCCCTaGAGGCCCAGAATCAGTAGTACAGCCAGGTTGCCTCCTGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: AKCSTNRCMRERLWP*RPRISSTARLPPVA Trigger: GGCCACAGGAGGCAACCTGGCTGTACTACTGATTCTGGGCCTCCAGGGCCATAAGCGCTCCCGCATGCATCTGTTCGTGCTGCACTTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027690.7 ENSMUST00000190410.2 |
||
| CDS CCA 90 bp | GTCAGGGCCAAGTGCAGCACGAACAGATGCATGCGGGAGCGCTTATaGCCCTGGAGGCCCAGAATCAGTAGTACAGCCAGGTTGCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: VRAKCSTNRCMRERL*PWRPRISSTARLPP Trigger: AGGAGGCAACCTGGCTGTACTACTGATTCTGGGCCTCCAGGGCCATAAGCGCTCCCGCATGCATCTGTTCGTGCTGCACTTGGCCCTGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027690.7 ENSMUST00000190410.2 |
||
| CDS-3UTR CAA 90 bp | AGGCTCATCGTCTTACTGACAGTGGTCACAGCTAGGACAGAGTCAGGACCCAGCCAGGGTGTGGTGGTATaGGGGACAAACAGGGTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: RLIVLLTVVTARTESGPSQGVVV*GTNRVP Trigger: GGGCACCCTGTTTGTCCCCAATACCACCACACCCTG...GCTGGGTCCTGACTCTGTCCTAGCTGTGACCACTGTCAGTAAGACGATGAGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
||
| CDS-3UTR CAA 90 bp | AGGCTCATCGTCTTACTGACAGTGGTCACAGCTAGGACAGAGTCAGGACCCAGCCTAGCGAGGCTGCTGTaGGAGAGCTGCCTGTGCACT | + |
|
Preference number: 5 (lower is better) Translates to: RLIVLLTVVTARTESGPSLARLL*ESCLCT Trigger: AGTGCACAGGCAGCTCTCCAACAGCAGCCTCGCTAG...GCTGGGTCCTGACTCTGTCCTAGCTGTGACCACTGTCAGTAAGACGATGAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
||
| CDS-3UTR CAA 90 bp | GCTGCTGTTGGAGAGCTGCCTGTGCACTCGGGGCTTGGAACCCCTGCAGCAGGCATGGTGAAAGCCACATaGGTAGAATCTGGAAAAGCG | + |
|
Preference number: 5 (lower is better) Translates to: AAVGELPVHSGLGTPAAGMVKAT*VESGKA Trigger: CGCTTTTCCAGATTCTACCAATGTGGCTTTCACCAT...GCCTGCTGCAGGGGTTCCAAGCCCCGAGTGCACAGGCAGCTCTCCAACAGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000190410.2 |
||
| CDS-3UTR CAA 90 bp | TCCCACACCACCCATCCTGTGGTAAGGGTGATGGGGAGAAGAGCCAGCATTTACGCAGAAGATGAGGACTaGGGCCAGCCCCTTCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SHTTHPVVRVMGRRASIYAEDED*GQPLLS Trigger: GGAAAGAAGGGGCTGGCCCAAGTCCTCATCTTCTGC...GTAAATGCTGGCTCTTCTCCCCATCACCCTTACCACAGGATGGGTGGTGTGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
||
| CDS-3UTR CAA 90 bp | AGGCTCATCGTCTTACTGACAGTGGTCACAGCTAGGACAGAGTCAGGACCCAGCATGGTGAAAGCCACATaGGTAGAATCTTCATTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RLIVLLTVVTARTESGPSMVKAT*VESSLG Trigger: CCCTAATGAAGATTCTACCAATGTGGCTTTCACCAT...GCTGGGTCCTGACTCTGTCCTAGCTGTGACCACTGTCAGTAAGACGATGAGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
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| CDS CCA 72 bp | GGCTGCTGTTGGAGAGCTGCCTGTGCACTCGGGGCTTaGAACCCCTGCAGCAGGCGCGGTGACTCAGGGAAC | + |
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Preference number: 6 (lower is better) Translates to: GCCWRAACALGA*NPCSRRGDSGN Trigger: GTTCCCTGAGTCACCGCGCCTGCTGCAGGGGTTCCAAGCCCCGAGTGCACAGGCAGCTCTCCAACAGCAGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
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| CDS GCA 72 bp | CCCAGGTCGGTCAGGGCCAAGTGCAGCACGAACAGATaGATGCGGGAGCGCTTATGGCCCTGGAGGCCCAGA | + |
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Preference number: 6 (lower is better) Translates to: PRSVRAKCSTNR*MRERLWPWRPR Trigger: TCTGGGCCTCCAGGGCCATAAGCGCTCCCGCATGCATCTGTTCGTGCTGCACTTGGCCCTGACCGACCTGGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027690.7 ENSMUST00000190410.2 |
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| CDS TCA 72 bp | TGCACTCGGGGCTTGGAACCCCTGCAGCAGGCGCGGTaGCTCAGGGAACGTGGCAACAGGTGGCTGTTGAAG | + |
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Preference number: 6 (lower is better) Translates to: CTRGLEPLQQAR*LRERGNRWLLK Trigger: CTTCAACAGCCACCTGTTGCCACGTTCCCTGAGTCACCGCGCCTGCTGCAGGGGTTCCAAGCCCCGAGTGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
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| CDS GCA 72 bp | GGTCGGTCAGGGCCAAGTGCAGCACGAACAGATGCATaGGGGAGCGCTTATGGCCCTGGAGGCCCAGAATCA | + |
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Preference number: 6 (lower is better) Translates to: GRSGPSAARTDA*GSAYGPGGPES Trigger: TGATTCTGGGCCTCCAGGGCCATAAGCGCTCCCGCATGCATCTGTTCGTGCTGCACTTGGCCCTGACCGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027690.7 ENSMUST00000190410.2 |
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| CDS TCA 72 bp | CCACGGGCAGCACAAAGATGGCCATGGTGGTCCAGGTaGTGTAGGCCCGCGGGCCCCAGGAAAAGTAGAAAT | + |
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Preference number: 6 (lower is better) Translates to: PRAAQRWPWWSR*CRPAGPRKSRN Trigger: ATTTCTACTTTTCCTGGGGCCCGCGGGCCTACATCACCTGGACCACCATGGCCATCTTTGTGCTGCCCGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
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| CDS CCA 72 bp | GGAACCCCTGCAGCAGGCGCGGTGACTCAGGGAACGTaGCAACAGGTGGCTGTTGAAGCCCATATAGATCCA | + |
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Preference number: 6 (lower is better) Translates to: GTPAAGAVTQGT*QQVAVEAHIDP Trigger: TGGATCTATATGGGCTTCAACAGCCACCTGTTGCCACGTTCCCTGAGTCACCGCGCCTGCTGCAGGGGTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
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| CDS CAA 72 bp | TGGCCCTGGAGGCCCAGAATCAGTAGTACAGCCAGGTaGCCTCCTGTGGCCAGAACCAGGACAGTAGCTAGG | + |
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Preference number: 6 (lower is better) Translates to: WPWRPRISSTAR*PPVARTRTVAR Trigger: CCTAGCTACTGTCCTGGTTCTGGCCACAGGAGGCAACCTGGCTGTACTACTGATTCTGGGCCTCCAGGGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027690.7 ENSMUST00000190410.2 |
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| CDS CAA 90 bp | CAGCTGCTGAGGTTGCCCAGAAGCATCGAGATGGTGAAAGCCACATaGGTAGAATCTGGAAAAGCGCCACGCCCAGGTCGGTCAGGGCCA | + |
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Preference number: 6 (lower is better) Translates to: QLLRLPRSIEMVKAT*VESGKAPRPGRSGP Trigger: TGGCCCTGACCGACCTGGGCGTGGCGCTTTTCCAGATTCTACCAATGTGGCTTTCACCATCTCGATGCTTCTGGGCAACCTCAGCAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190410.2 |
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| CDS CCA 72 bp | AGCACGAACAGATGCATGCGGGAGCGCTTATGGCCCTaGAGGCCCAGAATCAGTAGTACAGCCAGGTTGCCT | + |
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Preference number: 6 (lower is better) Translates to: STNRCMRERLWP*RPRISSTARLP Trigger: AGGCAACCTGGCTGTACTACTGATTCTGGGCCTCCAGGGCCATAAGCGCTCCCGCATGCATCTGTTCGTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027690.7 ENSMUST00000190410.2 |
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| CDS CCA 72 bp | AAGTGCAGCACGAACAGATGCATGCGGGAGCGCTTATaGCCCTGGAGGCCCAGAATCAGTAGTACAGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: KCSTNRCMRERL*PWRPRISSTAR Trigger: CCTGGCTGTACTACTGATTCTGGGCCTCCAGGGCCATAAGCGCTCCCGCATGCATCTGTTCGTGCTGCACTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027690.7 ENSMUST00000190410.2 |
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| CDS CAA 90 bp | GAGCGCTTATGGCCCTGGAGGCCCAGAATCAGTAGTACAGCCAGGTaGCCTCCTGTGGCCAGAACCAGGACAGTAGCTAGGATACCAATT | + |
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Preference number: 6 (lower is better) Translates to: ERLWPWRPRISSTAR*PPVARTRTVARIPI Trigger: AATTGGTATCCTAGCTACTGTCCTGGTTCTGGCCACAGGAGGCAACCTGGCTGTACTACTGATTCTGGGCCTCCAGGGCCATAAGCGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027690.7 ENSMUST00000190410.2 |
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| CDS CCA 72 bp | AAGCATCGAGATGGTGAAAGCCACATTGGTAGAATCTaGAAAAGCGCCACGCCCAGGTCGGTCAGGGCCAAG | + |
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Preference number: 6 (lower is better) Translates to: KHRDGESHIGRI*KSATPRSVRAK Trigger: CTTGGCCCTGACCGACCTGGGCGTGGCGCTTTTCCAGATTCTACCAATGTGGCTTTCACCATCTCGATGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190410.2 |
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| CDS CAA 72 bp | AGGTTGCCCAGAAGCATCGAGATGGTGAAAGCCACATaGGTAGAATCTGGAAAAGCGCCACGCCCAGGTCGG | + |
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Preference number: 6 (lower is better) Translates to: RLPRSIEMVKAT*VESGKAPRPGR Trigger: CCGACCTGGGCGTGGCGCTTTTCCAGATTCTACCAATGTGGCTTTCACCATCTCGATGCTTCTGGGCAACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190410.2 |
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| CDS CAA 90 bp | CCTGTGGCCAGAACCAGGACAGTAGCTAGGATACCAATTTCCACCTaGGCTAGCTCTTCATCCCTACCCAGCCAGGGTGTGGTGGTATTG | + |
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Preference number: 6 (lower is better) Translates to: PVARTRTVARIPIST*ASSSSLPSQGVVVL Trigger: CAATACCACCACACCCTGGCTGGGTAGGGATGAAGAGCTAGCCAAGGTGGAAATTGGTATCCTAGCTACTGTCCTGGTTCTGGCCACAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027690.7 ENSMUST00000190410.2 |
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| CDS CAA 72 bp | AGAACCAGGACAGTAGCTAGGATACCAATTTCCACCTaGGCTAGCTCTTCATCCCTACCCAGCCAGGGTGTG | + |
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Preference number: 6 (lower is better) Translates to: RTRTVARIPIST*ASSSSLPSQGV Trigger: CACACCCTGGCTGGGTAGGGATGAAGAGCTAGCCAAGGTGGAAATTGGTATCCTAGCTACTGTCCTGGTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027690.7 ENSMUST00000190410.2 |
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| CDS CAA 72 bp | AGGTTGCCCAGAAGCATCGAGATGGTGAAAGCCACATaGGTAGAATCTTCATTAGGGGCATTCTCGTCCCAC | + |
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Preference number: 6 (lower is better) Translates to: RLPRSIEMVKAT*VESSLGAFSSH Trigger: GTGGGACGAGAATGCCCCTAATGAAGATTCTACCAATGTGGCTTTCACCATCTCGATGCTTCTGGGCAACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027690.7 |
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