Pregenerated sensors for AVL9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029787Ensembl transcript IDs: ENSMUST00000031805.11, ENSMUST00000177249.3, ENSMUST00000204193.2
Found 182 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATGCGGCAGCCCTTCAGTGCGGCTCAGTCACCACTGCTGCTTCCTTaGACAGCACTGCCAATAGGAGAAGCACAGGGGCATCTTTGCTGC | + |
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Preference number: 1 (lower is better) Translates to: MRQPFSAAQSPLLLP*TALPIGEAQGHLCC Trigger: GCAGCAAAGATGCCCCTGTGCTTCTCCTATTGGCAGTGCTGTGCAAGGAAGCAGCAGTGGTGACTGAGCCGCACTGAAGGGCTGCCGCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| 3UTR GCA 90 bp | TGGGTTGTCAAAGTACTGCCCTCCAGACATGCGGCAGCCCTTCAGTaGGGCTCAGTCACCACTGCTGCTTCCTTGCACAGCACTGCCAAT | + |
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Preference number: 1 (lower is better) Translates to: WVVKVLPSRHAAALQ*GSVTTAASLHSTAN Trigger: ATTGGCAGTGCTGTGCAAGGAAGCAGCAGTGGTGACTGAGCCGCACTGAAGGGCTGCCGCATGTCTGGAGGGCAGTACTTTGACAACCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| 3UTR TCA 90 bp | CCAGAAATGAGCCCTGGTATCAGGACCACCTGCCTGTTATTAGCTTaGGGCTGTACAGTAATTGGAGGACTGTCCGAGGGCAGAGAGTCC | + |
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Preference number: 1 (lower is better) Translates to: PEMSPGIRTTCLLLA*GCTVIGGLSEGRES Trigger: GGACTCTCTGCCCTCGGACAGTCCTCCAATTACTGTACAGCCTCAAGCTAATAACAGGCAGGTGGTCCTGATACCAGGGCTCATTTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177249.3 |
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| 3UTR CCA 90 bp | GTCCATGTAAACAGTTTATCATCTTGGTCCCTGGGTATGGACCTTTaGATAGAAGAAGAAACCCTGGGAGCAGCAGACGGGGAGGGAGCA | + |
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Preference number: 1 (lower is better) Translates to: VHVNSLSSWSLGMDL*IEEETLGAADGEGA Trigger: TGCTCCCTCCCCGTCTGCTGCTCCCAGGGTTTCTTCTTCTATCCAAAGGTCCATACCCAGGGACCAAGATGATAAACTGTTTACATGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| 3UTR CCA 90 bp | AGCTCACTGGAGCCTAAAATACAGACTTCACGTGTCTGGGCTCACTaGCTGTATCTCCTGTTCTCCATGACACAGGCTGCTGCATTAGGT | + |
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Preference number: 1 (lower is better) Translates to: SSLEPKIQTSRVWAH*LYLLFSMTQAAALG Trigger: ACCTAATGCAGCAGCCTGTGTCATGGAGAACAGGAGATACAGCCAGTGAGCCCAGACACGTGAAGTCTGTATTTTAGGCTCCAGTGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| 3UTR CCA 90 bp | GGCTGTACAGTAATTGGAGGACTGTCCGAGGGCAGAGAGTCCTTTTaGAATAAGTGTGTCTGGTCTGACCCCATCTGCTCCCTTTCTTTC | + |
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Preference number: 1 (lower is better) Translates to: GCTVIGGLSEGRESF*NKCVWSDPICSLSF Trigger: GAAAGAAAGGGAGCAGATGGGGTCAGACCAGACACACTTATTCCAAAAGGACTCTCTGCCCTCGGACAGTCCTCCAATTACTGTACAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177249.3 |
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| 3UTR CCA 90 bp | CAGAGGCATGCCATATTGGTCTTCTTCCAAACCAGAAATGAGCCCTaGTATCAGGACCACCTGCCTGTTATTAGCTTGAGGCTGTACAGT | + |
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Preference number: 1 (lower is better) Translates to: QRHAILVFFQTRNEP*YQDHLPVISLRLYS Trigger: ACTGTACAGCCTCAAGCTAATAACAGGCAGGTGGTCCTGATACCAGGGCTCATTTCTGGTTTGGAAGAAGACCAATATGGCATGCCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177249.3 |
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| 3UTR TCA 90 bp | CTCAACAGCAGTGCAGCTACTGTCAATGTCTGCCTGCTGGAAACCTaGAAAATGCTGGTTGACTTTCGCTCCTGCAGGTCTAGTTACAAA | + |
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Preference number: 1 (lower is better) Translates to: LNSSAATVNVCLLET*KMLVDFRSCRSSYK Trigger: TTTGTAACTAGACCTGCAGGAGCGAAAGTCAACCAGCATTTTTCAGGTTTCCAGCAGGCAGACATTGACAGTAGCTGCACTGCTGTTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| 3UTR CCA 90 bp | ACAGTCCATTTTACCTTTGTAAAGATGGCCAGAGGCATGCCATATTaGTCTTCTTCCAAACCAGAAATGAGCCCTGGTATCAGGACCACC | + |
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Preference number: 1 (lower is better) Translates to: TVHFTFVKMARGMPY*SSSKPEMSPGIRTT Trigger: GGTGGTCCTGATACCAGGGCTCATTTCTGGTTTGGAAGAAGACCAATATGGCATGCCTCTGGCCATCTTTACAAAGGTAAAATGGACTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177249.3 |
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| 3UTR GCA 90 bp | AAAAGCAGAAAGACTGAGGAAGTCCTGTCATGCACTCTACTTTGCTaGCCAAGAAAGCCAACTGTTTCTTACCGCAAAAGGAGAGAACTG | + |
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Preference number: 1 (lower is better) Translates to: KSRKTEEVLSCTLLC*PRKPTVSYRKRREL Trigger: CAGTTCTCTCCTTTTGCGGTAAGAAACAGTTGGCTTTCTTGGGCAGCAAAGTAGAGTGCATGACAGGACTTCCTCAGTCTTTCTGCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| 3UTR GCA 90 bp | GTGAAAAGCAGAAAGACTGAGGAAGTCCTGTCATGCACTCTACTTTaGTGCCCAAGAAAGCCAACTGTTTCTTACCGCAAAAGGAGAGAA | + |
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Preference number: 1 (lower is better) Translates to: VKSRKTEEVLSCTLL*CPRKPTVSYRKRRE Trigger: TTCTCTCCTTTTGCGGTAAGAAACAGTTGGCTTTCTTGGGCAGCAAAGTAGAGTGCATGACAGGACTTCCTCAGTCTTTCTGCTTTTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| 3UTR GCA 90 bp | TCCAACCCTCCCATAGAAGTCCACCCTAGAGAACTCAGACTGGAATaGATAGTCCCTACCCATTACAAATACATTTTAGGGCTAACTTCA | + |
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Preference number: 1 (lower is better) Translates to: SNPPIEVHPRELRLE*IVPTHYKYILGLTS Trigger: TGAAGTTAGCCCTAAAATGTATTTGTAATGGGTAGGGACTATGCATTCCAGTCTGAGTTCTCTAGGGTGGACTTCTATGGGAGGGTTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| 3UTR CCA 90 bp | TGCAGGTCTAGTTACAAACACTCAGTTCTTAAGACACAAGAGCACTaGCAATCACTGGAGAAAGCATGGTTTCCAATAGCCACATCTCCT | + |
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Preference number: 1 (lower is better) Translates to: CRSSYKHSVLKTQEH*QSLEKAWFPIATSP Trigger: AGGAGATGTGGCTATTGGAAACCATGCTTTCTCCAGTGATTGCCAGTGCTCTTGTGTCTTAAGAACTGAGTGTTTGTAACTAGACCTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| 3UTR GCA 90 bp | TCTACTCTACTCCAGACTCACAGCTTGTATTCTCTTCCTTATCTGTaGCTTTGTCGTTACACTACGATCAAAACTACCTCAACAGCAGTG | + |
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Preference number: 1 (lower is better) Translates to: STLLQTHSLYSLPYL*LCRYTTIKTTSTAV Trigger: CACTGCTGTTGAGGTAGTTTTGATCGTAGTGTAACGACAAAGGCACAGATAAGGAAGAGAATACAAGCTGTGAGTCTGGAGTAGAGTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| 3UTR TCA 90 bp | GCAGGCAATTCGGCAAGTCATATAAACCTGGTACAAACTAAAGAATaGATCATTACCTTATTAGCTAACCCAGGCAGGGCTCCTAGCAAT | + |
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Preference number: 1 (lower is better) Translates to: AGNSASHINLVQTKE*IITLLANPGRAPSN Trigger: ATTGCTAGGAGCCCTGCCTGGGTTAGCTAATAAGGTAATGATTCATTCTTTAGTTTGTACCAGGTTTATATGACTTGCCGAATTGCCTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| 3UTR CCA 90 bp | CTTTGTGTGTGTGAATATAAGAATTTGCACGACACATTGCCTACATaGAGGTCAGAGGACAATTTTCAAGAGTTGGTTCTTCCTTTCCAC | + |
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Preference number: 1 (lower is better) Translates to: LCVCEYKNLHDTLPT*RSEDNFQELVLPFH Trigger: GTGGAAAGGAAGAACCAACTCTTGAAAATTGTCCTCTGACCTCCATGTAGGCAATGTGTCGTGCAAATTCTTATATTCACACACACAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| 3UTR CCA 90 bp | GGTAACATGAAGCCAACTGTACTGATTTACCAAACAACTGACTCCTaGCATGGGTGCGAATTCATTTTCTTGCTTCTTACTGTTCTTTCA | + |
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Preference number: 1 (lower is better) Translates to: GNMKPTVLIYQTTDS*HGCEFIFLLLTVLS Trigger: TGAAAGAACAGTAAGAAGCAAGAAAATGAATTCGCACCCATGCCAGGAGTCAGTTGTTTGGTAAATCAGTACAGTTGGCTTCATGTTACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| 3UTR GCA 90 bp | GGTGGACAATTCATGTTGGTTATAAATCAGATATACATATACAATTaGTCTACATCCTGTTACACGCAGCTTCAGAATTTCTACTCTACT | + |
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Preference number: 1 (lower is better) Translates to: GGQFMLVINQIYIYN*STSCYTQLQNFYST Trigger: AGTAGAGTAGAAATTCTGAAGCTGCGTGTAACAGGATGTAGAGCAATTGTATATGTATATCTGATTTATAACCAACATGAATTGTCCACC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| 3UTR-3UTR GCA 90 bp | CAACACATGAACAGGCTGGTGCAGCTAGCACCACAGGCAGGAGGCAGCAGCTTCCTCAGTCACCACTGCTaGTTCCTTGCACAGCACTGC | + |
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Preference number: 2 (lower is better) Translates to: QHMNRLVQLAPQAGGSSFLSHHC*FLAQHC Trigger: GCAGTGCTGTGCAAGGAAGCAGCAGTGGTGACTGAG...GAAGCTGCTGCCTCCTGCCTGTGGTGCTAGCTGCACCAGCCTGTTCATGTGTTG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| 3UTR-3UTR TCA 90 bp | CAACACATGAACAGGCTGGTGCAGCTAGCACCACAGGCAGGAGGCAGCAGCTTCTGTTTTGAGGAACTCTaGCTCTGTTCCCGCCTCATT | + |
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Preference number: 2 (lower is better) Translates to: QHMNRLVQLAPQAGGSSFCFEEL*LCSRLI Trigger: AATGAGGCGGGAACAGAGTCAGAGTTCCTCAAAACA...GAAGCTGCTGCCTCCTGCCTGTGGTGCTAGCTGCACCAGCCTGTTCATGTGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| 3UTR-3UTR TCA 90 bp | CAACACATGAACAGGCTGGTGCAGCTAGCACCACAGGCAGGAGGCAGCAGCTTCGAGGTCAAGTGCCTTTaGAAAGCTCAATGCAGAACA | + |
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Preference number: 2 (lower is better) Translates to: QHMNRLVQLAPQAGGSSFEVKCL*KAQCRT Trigger: TGTTCTGCATTGAGCTTTTCAAAGGCACTTGACCTC...GAAGCTGCTGCCTCCTGCCTGTGGTGCTAGCTGCACCAGCCTGTTCATGTGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| 3UTR-3UTR TCA 90 bp | CAACACATGAACAGGCTGGTGCAGCTAGCACCACAGGCAGGAGGCAGCAGCTTCTGCCTGCTGGAAACCTaGAAAATGCTGGTTGACTTT | + |
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Preference number: 2 (lower is better) Translates to: QHMNRLVQLAPQAGGSSFCLLET*KMLVDF Trigger: AAAGTCAACCAGCATTTTTCAGGTTTCCAGCAGGCA...GAAGCTGCTGCCTCCTGCCTGTGGTGCTAGCTGCACCAGCCTGTTCATGTGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| 3UTR-3UTR CCA 90 bp | TGGAGGCTGCAGCAGACACTGCCTGTGGGTATAAATCAGGATGCTGGCCGCAGGCTAAGAGAAGGCCTGTaGATCTATCCAGATCCAACA | + |
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Preference number: 2 (lower is better) Translates to: WRLQQTLPVGINQDAGRRLREGL*IYPDPT Trigger: TGTTGGATCTGGATAGATCCACAGGCCTTCTCTTAG...CCTGCGGCCAGCATCCTGATTTATACCCACAGGCAGTGTCTGCTGCAGCCTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| 3UTR-3UTR CCA 90 bp | CAACACATGAACAGGCTGGTGCAGCTAGCACCACAGGCAGGAGGCAGCAGCTTCCAAACAACTGACTCCTaGCATGGGTGCGAATTCATT | + |
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Preference number: 2 (lower is better) Translates to: QHMNRLVQLAPQAGGSSFQTTDS*HGCEFI Trigger: AATGAATTCGCACCCATGCCAGGAGTCAGTTGTTTG...GAAGCTGCTGCCTCCTGCCTGTGGTGCTAGCTGCACCAGCCTGTTCATGTGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| 3UTR CAA 90 bp | CGTCCATGTAAACAGTTTATCATCTTGGTCCCTGGGTATGGACCTTaGGATAGAAGAAGAAACCCTGGGAGCAGCAGACGGGGAGGGAGC | + |
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Preference number: 2 (lower is better) Translates to: RPCKQFIILVPGYGP*DRRRNPGSSRRGGS Trigger: GCTCCCTCCCCGTCTGCTGCTCCCAGGGTTTCTTCTTCTATCCAAAGGTCCATACCCAGGGACCAAGATGATAAACTGTTTACATGGACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| 3UTR CAA 90 bp | ACCAGAAATGAGCCCTGGTATCAGGACCACCTGCCTGTTATTAGCTaGAGGCTGTACAGTAATTGGAGGACTGTCCGAGGGCAGAGAGTC | + |
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Preference number: 2 (lower is better) Translates to: TRNEPWYQDHLPVIS*RLYSNWRTVRGQRV Trigger: GACTCTCTGCCCTCGGACAGTCCTCCAATTACTGTACAGCCTCAAGCTAATAACAGGCAGGTGGTCCTGATACCAGGGCTCATTTCTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177249.3 |
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| 3UTR-3UTR TCA 90 bp | TGGAGGCTGCAGCAGACACTGCCTGTGGGTATAAATCAGGATGCTGGCCGCAGGCATGCCTTCTGTTACTaGAAAGGTAGACTGTTTCCT | + |
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Preference number: 2 (lower is better) Translates to: WRLQQTLPVGINQDAGRRHAFCY*KGRLFP Trigger: AGGAAACAGTCTACCTTTTCAGTAACAGAAGGCATG...CCTGCGGCCAGCATCCTGATTTATACCCACAGGCAGTGTCTGCTGCAGCCTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| 3UTR-3UTR TCA 90 bp | GCAGAGAGTCCTTTTGGAATAAGTGTGTCTGGTCTGACCCCATCTGCTCCCTTTACTGAGAACAGTCACTaGGGCCATGCTCAATCATGC | + |
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Preference number: 2 (lower is better) Translates to: AESPFGISVSGLTPSAPFTENSH*GHAQSC Trigger: GCATGATTGAGCATGGCCTCAGTGACTGTTCTCAGT...AAAGGGAGCAGATGGGGTCAGACCAGACACACTTATTCCAAAAGGACTCTCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177249.3 |
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| 3UTR-3UTR CCA 90 bp | CTGTCAATGTCTGCCTGCTGGAAACCTGAAAAATGCTGGTTGACTTTCGCTCCTTGGGTTCCAGGGATCTaGACTCAGGTTGTCATGCTT | + |
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Preference number: 2 (lower is better) Translates to: LSMSACWKPEKCWLTFAPWVPGI*TQVVML Trigger: AAGCATGACAACCTGAGTCCAGATCCCTGGAACCCA...AGGAGCGAAAGTCAACCAGCATTTTTCAGGTTTCCAGCAGGCAGACATTGACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| 3UTR-3UTR TCA 90 bp | ACTGGGTTCCTGTCCTTTGTTGTTGTTACCTTCTACTTGGAAGTAAGGCTTCTCGAGGGATTACTTTCCTaGGGTCCAGCATCTTCAGAC | + |
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Preference number: 2 (lower is better) Translates to: TGFLSFVVVTFYLEVRLLEGLLS*GPASSD Trigger: GTCTGAAGATGCTGGACCTCAGGAAAGTAATCCCTC...GAGAAGCCTTACTTCCAAGTAGAAGGTAACAACAACAAAGGACAGGAACCCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177249.3 |
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| 3UTR-3UTR GCA 90 bp | CTGTCAATGTCTGCCTGCTGGAAACCTGAAAAATGCTGGTTGACTTTCGCTCCTGACTCCTGGCATGGGTaGGAATTCATTTTCTTGCTT | + |
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Preference number: 2 (lower is better) Translates to: LSMSACWKPEKCWLTFAPDSWHG*EFIFLL Trigger: AAGCAAGAAAATGAATTCGCACCCATGCCAGGAGTC...AGGAGCGAAAGTCAACCAGCATTTTTCAGGTTTCCAGCAGGCAGACATTGACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| 3UTR CAA 90 bp | CAGCTACTGTCAATGTCTGCCTGCTGGAAACCTGAAAAATGCTGGTaGACTTTCGCTCCTGCAGGTCTAGTTACAAACACTCAGTTCTTA | + |
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Preference number: 2 (lower is better) Translates to: QLLSMSACWKPEKCW*TFAPAGLVTNTQFL Trigger: TAAGAACTGAGTGTTTGTAACTAGACCTGCAGGAGCGAAAGTCAACCAGCATTTTTCAGGTTTCCAGCAGGCAGACATTGACAGTAGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| 3UTR-3UTR GCA 90 bp | CTGTCAATGTCTGCCTGCTGGAAACCTGAAAAATGCTGGTTGACTTTCGCTCCTATGGATATATCAGCATaGTGCAGCCACATGAAATGG | + |
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Preference number: 2 (lower is better) Translates to: LSMSACWKPEKCWLTFAPMDISA*CSHMKW Trigger: CCATTTCATGTGGCTGCAGCATGCTGATATATCCAT...AGGAGCGAAAGTCAACCAGCATTTTTCAGGTTTCCAGCAGGCAGACATTGACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| 3UTR-3UTR TCA 90 bp | CTGTCAATGTCTGCCTGCTGGAAACCTGAAAAATGCTGGTTGACTTTCGCTCCTGCTTCACACCAACTGTaGCAAGAAGACATTCATAAA | + |
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Preference number: 2 (lower is better) Translates to: LSMSACWKPEKCWLTFAPASHQL*QEDIHK Trigger: TTTATGAATGTCTTCTTGTCACAGTTGGTGTGAAGC...AGGAGCGAAAGTCAACCAGCATTTTTCAGGTTTCCAGCAGGCAGACATTGACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| 3UTR-3UTR GCA 90 bp | GCTCACTGGCTGTATCTCCTGTTCTCCATGACACAGGCTGCTGCATTAGGTGATAAGTCAGTGCTGCATTaGTTTTGTTTAAGTAATAGC | + |
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Preference number: 2 (lower is better) Translates to: AHWLYLLFSMTQAAALGDKSVLH*FCLSNS Trigger: GCTATTACTTAAACAAAAGCAATGCAGCACTGACTT...ATCACCTAATGCAGCAGCCTGTGTCATGGAGAACAGGAGATACAGCCAGTGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| 3UTR-3UTR CCA 90 bp | CCCAACCTGGAAAGCTATTCCGCTACGGTTGTAATTTCATCCATTCAGCATACTCTGGGTATGGACCTTTaGATAGAAGAAGAAACCCTG | + |
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Preference number: 2 (lower is better) Translates to: PNLESYSATVVISSIQHTLGMDL*IEEETL Trigger: CAGGGTTTCTTCTTCTATCCAAAGGTCCATACCCAG...AGTATGCTGAATGGATGAAATTACAACCGTAGCGGAATAGCTTTCCAGGTTGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| 3UTR-3UTR CCA 90 bp | GCTCTACATCCTGTTACACGCAGCTTCAGAATTTCTACTCTACTCCAGACTCACCAACAAAATGGCCTATaGCCCTTGAAAAGCCAACAT | + |
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Preference number: 2 (lower is better) Translates to: ALHPVTRSFRISTLLQTHQQNGL*PLKSQH Trigger: ATGTTGGCTTTTCAAGGGCCATAGGCCATTTTGTTG...GTGAGTCTGGAGTAGAGTAGAAATTCTGAAGCTGCGTGTAACAGGATGTAGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| 3UTR CAA 90 bp | GTTACACGCAGCTTCAGAATTTCTACTCTACTCCAGACTCACAGCTaGTATTCTCTTCCTTATCTGTGCCTTTGTCGTTACACTACGATC | + |
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Preference number: 2 (lower is better) Translates to: VTRSFRISTLLQTHS*YSLPYLCLCRYTTI Trigger: GATCGTAGTGTAACGACAAAGGCACAGATAAGGAAGAGAATACAAGCTGTGAGTCTGGAGTAGAGTAGAAATTCTGAAGCTGCGTGTAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| 3UTR-3UTR GCA 90 bp | ACTGCCATGACTCTTGTGACAGTTTCCAAGCTGGTATTTAAGACGTCAGAAGTAGGCCATGCTCAATCATaGCTGGAAAAAGGGATAACA | + |
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Preference number: 2 (lower is better) Translates to: TAMTLVTVSKLVFKTSEVGHAQS*LEKGIT Trigger: TGTTATCCCTTTTTCCAGGCATGATTGAGCATGGCC...TACTTCTGACGTCTTAAATACCAGCTTGGAAACTGTCACAAGAGTCATGGCAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177249.3 |
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| 3UTR-3UTR CCA 90 bp | GTAAGTATGTTTAAGTGGGTAGAAGGTTTCCTCCAACCCTCCCATAGAAGTCCAAACAGTTTATCATCTTaGTCCCTGGGTATGGACCTT | + |
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Preference number: 2 (lower is better) Translates to: VSMFKWVEGFLQPSHRSPNSLSS*SLGMDL Trigger: AAGGTCCATACCCAGGGACCAAGATGATAAACTGTT...TGGACTTCTATGGGAGGGTTGGAGGAAACCTTCTACCCACTTAAACATACTTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| 3UTR CAA 90 bp | ACCGGCACAAACTACAAAGCCACTGGAGGAAAGAGAAGCTATAGCTaGACTTCCTTAAAAACTGTTTTCCAATCATTAAGTACCTCCACC | + |
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Preference number: 2 (lower is better) Translates to: TGTNYKATGGKRSYS*TSLKTVFQSLSTST Trigger: GGTGGAGGTACTTAATGATTGGAAAACAGTTTTTAAGGAAGTCAAGCTATAGCTTCTCTTTCCTCCAGTGGCTTTGTAGTTTGTGCCGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| 3UTR-3UTR GCA 90 bp | TCCAACAGACAACCATTCACAAGAAACAAGGCACATAATTTTGATAACAAAGTGCCACTGCTGCTTCCTTaGACAGCACTGCCAATAGGA | + |
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Preference number: 2 (lower is better) Translates to: SNRQPFTRNKAHNFDNKVPLLLP*TALPIG Trigger: TCCTATTGGCAGTGCTGTGCAAGGAAGCAGCAGTGG...CACTTTGTTATCAAAATTATGTGCCTTGTTTCTTGTGAATGGTTGTCTGTTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| 3UTR-3UTR GCA 90 bp | GCTCTACATCCTGTTACACGCAGCTTCAGAATTTCTACTCTACTCCAGACTCACCCTTGGCCAACTTCTTaGTTTTCTAAATGTGAACTA | + |
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Preference number: 2 (lower is better) Translates to: ALHPVTRSFRISTLLQTHPWPTS*FSKCEL Trigger: TAGTTCACATTTAGAAAAGCAAGAAGTTGGCCAAGG...GTGAGTCTGGAGTAGAGTAGAAATTCTGAAGCTGCGTGTAACAGGATGTAGAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| 3UTR-3UTR CCA 90 bp | ACATGCACAATCTTTTCATTTTGGAGTGTTATAGTATACGAGGCAGCCAGTTTCCAAGAGGGAGGAAGTTaGCAATTTAGAGACCTGTGT | + |
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Preference number: 2 (lower is better) Translates to: TCTIFSFWSVIVYEAASFQEGGS*QFRDLC Trigger: ACACAGGTCTCTAAATTGCCAACTTCCTCCCTCTTG...GAAACTGGCTGCCTCGTATACTATAACACTCCAAAATGAAAAGATTGTGCATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| 3UTR-3UTR CCA 90 bp | CATGGGAAGCTGATGAAAAATACGATTGGAAACCCCTTAAATTGCGTTCCATATCTGGGATTACAGATGTaGCTTTTTATGTGGGTTCCA | + |
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Preference number: 2 (lower is better) Translates to: HGKLMKNTIGNPLNCVPYLGLQM*LFMWVP Trigger: TGGAACCCACATAAAAAGCCACATCTGTAATCCCAG...ATATGGAACGCAATTTAAGGGGTTTCCAATCGTATTTTTCATCAGCTTCCCATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| 3UTR CAA 90 bp | CTGTTCTTTCATTTGAGGTGTCTTTGTGTGTGTGAATATAAGAATTaGCACGACACATTGCCTACATGGAGGTCAGAGGACAATTTTCAA | + |
|
Preference number: 2 (lower is better) Translates to: LFFHLRCLCVCEYKN*HDTLPTWRSEDNFQ Trigger: TTGAAAATTGTCCTCTGACCTCCATGTAGGCAATGTGTCGTGCAAATTCTTATATTCACACACACAAAGACACCTCAAATGAAAGAACAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| 3UTR-3UTR TCA 90 bp | ACATGCACAATCTTTTCATTTTGGAGTGTTATAGTATACGAGGCAGCCAGTTTCCTCAAATGGGGAGTGTaGAACAAAACCAGTTACATT | + |
|
Preference number: 2 (lower is better) Translates to: TCTIFSFWSVIVYEAASFLKWGV*NKTSYI Trigger: AATGTAACTGGTTTTGTTTCACACTCCCCATTTGAG...GAAACTGGCTGCCTCGTATACTATAACACTCCAAAATGAAAAGATTGTGCATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| 3UTR-3UTR GCA 90 bp | CATGGGAAGCTGATGAAAAATACGATTGGAAACCCCTTAAATTGCGTTCCATATGATATATCAGCATGCTaGAGCCACATGAAATGGTAT | + |
|
Preference number: 2 (lower is better) Translates to: HGKLMKNTIGNPLNCVPYDISAC*SHMKWY Trigger: ATACCATTTCATGTGGCTGCAGCATGCTGATATATC...ATATGGAACGCAATTTAAGGGGTTTCCAATCGTATTTTTCATCAGCTTCCCATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| 3UTR-3UTR TCA 90 bp | ACATGCACAATCTTTTCATTTTGGAGTGTTATAGTATACGAGGCAGCCAGTTTCCTCCTAGAGGATAAATaGAAGATAATCAATGCCTCT | + |
|
Preference number: 2 (lower is better) Translates to: TCTIFSFWSVIVYEAASFLLEDK*KIINAS Trigger: AGAGGCATTGATTATCTTTCATTTATCCTCTAGGAG...GAAACTGGCTGCCTCGTATACTATAACACTCCAAAATGAAAAGATTGTGCATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| 3UTR GCA 72 bp | AAAGTACTGCCCTCCAGACATGCGGCAGCCCTTCAGTaGGGCTCAGTCACCACTGCTGCTTCCTTGCACAGC | + |
|
Preference number: 3 (lower is better) Translates to: KVLPSRHAAALQ*GSVTTAASLHS Trigger: GCTGTGCAAGGAAGCAGCAGTGGTGACTGAGCCGCACTGAAGGGCTGCCGCATGTCTGGAGGGCAGTACTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| 3UTR GCA 72 bp | CCCTTCAGTGCGGCTCAGTCACCACTGCTGCTTCCTTaGACAGCACTGCCAATAGGAGAAGCACAGGGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: PFSAAQSPLLLP*TALPIGEAQGH Trigger: ATGCCCCTGTGCTTCTCCTATTGGCAGTGCTGTGCAAGGAAGCAGCAGTGGTGACTGAGCCGCACTGAAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| 3UTR-3UTR CAA 90 bp | TGGAGGCTGCAGCAGACACTGCCTGTGGGTATAAATCAGGATGCTGGCCGCAGGAATTTGCACGACACATaGCCTACATGGAGGTCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: WRLQQTLPVGINQDAGRRNLHDT*PTWRSE Trigger: CTCTGACCTCCATGTAGGCAATGTGTCGTGCAAATT...CCTGCGGCCAGCATCCTGATTTATACCCACAGGCAGTGTCTGCTGCAGCCTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| 3UTR TCA 72 bp | TCTCCTGTTCTCCATGACACAGGCTGCTGCATTAGGTaGTGCCCCCAGCAACAAAATGGCCTATGGCCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: SPVLHDTGCCIR*CPQQQNGLWPL Trigger: CAAGGGCCATAGGCCATTTTGTTGCTGGGGGCATCACCTAATGCAGCAGCCTGTGTCATGGAGAACAGGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| 3UTR TCA 72 bp | AGCCCTGGTATCAGGACCACCTGCCTGTTATTAGCTTaGGGCTGTACAGTAATTGGAGGACTGTCCGAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: SPGIRTTCLLLA*GCTVIGGLSEG Trigger: GCCCTCGGACAGTCCTCCAATTACTGTACAGCCTCAAGCTAATAACAGGCAGGTGGTCCTGATACCAGGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177249.3 |
||
| 3UTR TCA 72 bp | GCCACATCTCCTGGCAATAGTCAAAAGGCCAGGTGTTaGCTAAAGGACTACCATGCCAGCACTGGAGGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: ATSPGNSQKARC*LKDYHASTGGR Trigger: TCTCCCTCCAGTGCTGGCATGGTAGTCCTTTAGTCAACACCTGGCCTTTTGACTATTGCCAGGAGATGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| 3UTR CCA 72 bp | GTAATTGGAGGACTGTCCGAGGGCAGAGAGTCCTTTTaGAATAAGTGTGTCTGGTCTGACCCCATCTGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: VIGGLSEGRESF*NKCVWSDPICS Trigger: GGAGCAGATGGGGTCAGACCAGACACACTTATTCCAAAAGGACTCTCTGCCCTCGGACAGTCCTCCAATTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177249.3 |
||
| 3UTR-3UTR CAA 90 bp | GCTCACTGGCTGTATCTCCTGTTCTCCATGACACAGGCTGCTGCATTAGGTGATAGCACAGGGGCATCTTaGCTGCTTCACACCAACTGT | + |
|
Preference number: 3 (lower is better) Translates to: AHWLYLLFSMTQAAALGDSTGAS*LLHTNC Trigger: ACAGTTGGTGTGAAGCAGCAAAGATGCCCCTGTGCT...ATCACCTAATGCAGCAGCCTGTGTCATGGAGAACAGGAGATACAGCCAGTGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| 3UTR CCA 72 bp | GAGCCTAAAATACAGACTTCACGTGTCTGGGCTCACTaGCTGTATCTCCTGTTCTCCATGACACAGGCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: EPKIQTSRVWAH*LYLLFSMTQAA Trigger: AGCAGCCTGTGTCATGGAGAACAGGAGATACAGCCAGTGAGCCCAGACACGTGAAGTCTGTATTTTAGGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| 3UTR CCA 72 bp | TCCGAGGGCAGAGAGTCCTTTTGGAATAAGTGTGTCTaGTCTGACCCCATCTGCTCCCTTTCTTTCAAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: SEGRESFWNKCV*SDPICSLSFKL Trigger: CAGCTTGAAAGAAAGGGAGCAGATGGGGTCAGACCAGACACACTTATTCCAAAAGGACTCTCTGCCCTCGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177249.3 |
||
| 3UTR-3UTR CAA 90 bp | GCTCACTGGCTGTATCTCCTGTTCTCCATGACACAGGCTGCTGCATTAGGTGATGGAGGTCAAGTGCCTTaGAAAAGCTCAATGCAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: AHWLYLLFSMTQAAALGDGGQVP*KSSMQN Trigger: GTTCTGCATTGAGCTTTTCAAAGGCACTTGACCTCC...ATCACCTAATGCAGCAGCCTGTGTCATGGAGAACAGGAGATACAGCCAGTGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| 3UTR-3UTR CAA 90 bp | TGGAGGCTGCAGCAGACACTGCCTGTGGGTATAAATCAGGATGCTGGCCGCAGGGACAATTTTCAAGAGTaGGTTCTTCCTTTCCACATT | + |
|
Preference number: 3 (lower is better) Translates to: WRLQQTLPVGINQDAGRRDNFQE*VLPFHI Trigger: AATGTGGAAAGGAAGAACCAACTCTTGAAAATTGTC...CCTGCGGCCAGCATCCTGATTTATACCCACAGGCAGTGTCTGCTGCAGCCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| 3UTR-3UTR CAA 90 bp | CTGGCCGCAGGACTTCTAAATTTATCAACATGGAAGGAAGAGAGCCACTGGCTGGTCATGCACTCTACTTaGCTGCCCAAGAAAGCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: LAAGLLNLSTWKEESHWLVMHST*LPKKAN Trigger: GTTGGCTTTCTTGGGCAGCAAAGTAGAGTGCATGAC...CAGCCAGTGGCTCTCTTCCTTCCATGTTGATAAATTTAGAAGTCCTGCGGCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| 3UTR GCA 72 bp | CTCCGTCTTGGGCACAGCATCTTCGCCATGGTTTACTaGCATGACTCTTGTGACAGTTTCCAAGCTGGTATT | + |
|
Preference number: 3 (lower is better) Translates to: LRLGHSIFAMVY*HDSCDSFQAGI Trigger: AATACCAGCTTGGAAACTGTCACAAGAGTCATGGCAGTAAACCATGGCGAAGATGCTGTGCCCAAGACGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177249.3 |
||
| 3UTR CCA 72 bp | CACCTGCCTGTTATTAGCTTGAGGCTGTACAGTAATTaGAGGACTGTCCGAGGGCAGAGAGTCCTTTTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: HLPVISLRLYSN*RTVRGQRVLLE Trigger: TTCCAAAAGGACTCTCTGCCCTCGGACAGTCCTCCAATTACTGTACAGCCTCAAGCTAATAACAGGCAGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177249.3 |
||
| 3UTR TCA 72 bp | GTTGGTTCTTCCTTTCCACATTGTTTTGAGGAACTCTaGCTCTGTTCCCGCCTCATTGTAGGGACACTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: VGSSFPHCFEEL*LCSRLIVGTLG Trigger: TCCCAGTGTCCCTACAATGAGGCGGGAACAGAGTCAGAGTTCCTCAAAACAATGTGGAAAGGAAGAACCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| 3UTR GCA 72 bp | ACAGCACTGCCAATAGGAGAAGCACAGGGGCATCTTTaGTGCTTCACACCAACTGTGACAAGAAGACATTCA | + |
|
Preference number: 3 (lower is better) Translates to: TALPIGEAQGHL*CFTPTVTRRHS Trigger: TGAATGTCTTCTTGTCACAGTTGGTGTGAAGCAGCAAAGATGCCCCTGTGCTTCTCCTATTGGCAGTGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| 3UTR GCA 72 bp | GTCGTTACACTACGATCAAAACTACCTCAACAGCAGTaGAGCTACTGTCAATGTCTGCCTGCTGGAAACCTG | + |
|
Preference number: 3 (lower is better) Translates to: VVTLRSKLPQQQ*SYCQCLPAGNL Trigger: CAGGTTTCCAGCAGGCAGACATTGACAGTAGCTGCACTGCTGTTGAGGTAGTTTTGATCGTAGTGTAACGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| 3UTR CCA 72 bp | GTAGGGACACTGGGATTACAGATGTGGCTTTTTATGTaGGTTCCAGGGATCTGGACTCAGGTTGTCATGCTT | + |
|
Preference number: 3 (lower is better) Translates to: VGTLGLQMWLFM*VPGIWTQVVML Trigger: AAGCATGACAACCTGAGTCCAGATCCCTGGAACCCACATAAAAAGCCACATCTGTAATCCCAGTGTCCCTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| 3UTR CCA 72 bp | AGGATGCTGGCCGCAGGACTTCTAAATTTATCAACATaGAAGGAAGAGAGCCACTGGCTGTTAACTCCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: RMLAAGLLNLST*KEESHWLLTPS Trigger: TGAGGGAGTTAACAGCCAGTGGCTCTCTTCCTTCCATGTTGATAAATTTAGAAGTCCTGCGGCCAGCATCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| 3UTR CCA 72 bp | GCCATATTGGTCTTCTTCCAAACCAGAAATGAGCCCTaGTATCAGGACCACCTGCCTGTTATTAGCTTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: AILVFFQTRNEP*YQDHLPVISLR Trigger: CCTCAAGCTAATAACAGGCAGGTGGTCCTGATACCAGGGCTCATTTCTGGTTTGGAAGAAGACCAATATGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177249.3 |
||
| 3UTR-3UTR CAA 90 bp | ACTGCTGCTTCCTTGCACAGCACTGCCAATAGGAGAAGCACAGGGGCATCTTTGTCACTACAACGTTCATaGTGTACATTAATTAGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: TAASLHSTANRRSTGASLSLQRS*CTLIRL Trigger: GAGCCTAATTAATGTACACAATGAACGTTGTAGTGA...CAAAGATGCCCCTGTGCTTCTCCTATTGGCAGTGCTGTGCAAGGAAGCAGCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| 3UTR-3UTR CAA 90 bp | TGGTATCAGGACCACCTGCCTGTTATTAGCTTGAGGCTGTACAGTAATTGGAGGGGTTCCTGTCCTTTGTaGTTGTTACCTTCTACTTGG | + |
|
Preference number: 3 (lower is better) Translates to: WYQDHLPVISLRLYSNWRGSCPL*LLPSTW Trigger: CCAAGTAGAAGGTAACAACAACAAAGGACAGGAACC...CCTCCAATTACTGTACAGCCTCAAGCTAATAACAGGCAGGTGGTCCTGATACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177249.3 |
||
| 3UTR TCA 72 bp | CCAGCATCTTCAGACATACTCTTTCGAGGTCTATACTaGGAACAGTCACTGAGGCCATGCTCAATCATGCCT | + |
|
Preference number: 3 (lower is better) Translates to: PASSDILFRGLY*EQSLRPCSIMP Trigger: AGGCATGATTGAGCATGGCCTCAGTGACTGTTCTCAGTATAGACCTCGAAAGAGTATGTCTGAAGATGCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177249.3 |
||
| 3UTR GCA 72 bp | CTACTGTCAATGTCTGCCTGCTGGAAACCTGAAAAATaGTGGTTGACTTTCGCTCCTGCAGGTCTAGTTACA | + |
|
Preference number: 3 (lower is better) Translates to: LLSMSACWKPEK*WLTFAPAGLVT Trigger: TGTAACTAGACCTGCAGGAGCGAAAGTCAACCAGCATTTTTCAGGTTTCCAGCAGGCAGACATTGACAGTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| 3UTR CCA 72 bp | GCTCTGGGAAGAAGTGAGCTGGTAAGTATGTTTAAGTaGGTAGAAGGTTTCCTCCAACCCTCCCATAGAAGT | + |
|
Preference number: 3 (lower is better) Translates to: ALGRSELVSMFK*VEGFLQPSHRS Trigger: ACTTCTATGGGAGGGTTGGAGGAAACCTTCTACCCACTTAAACATACTTACCAGCTCACTTCTTCCCAGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| 3UTR-3UTR CAA 90 bp | GTAAGTATGTTTAAGTGGGTAGAAGGTTTCCTCCAACCCTCCCATAGAAGTCCACCTGGGTATGGACCTTaGGATAGAAGAAGAAACCCT | + |
|
Preference number: 3 (lower is better) Translates to: VSMFKWVEGFLQPSHRSPPGYGP*DRRRNP Trigger: AGGGTTTCTTCTTCTATCCAAAGGTCCATACCCAGG...TGGACTTCTATGGGAGGGTTGGAGGAAACCTTCTACCCACTTAAACATACTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| 3UTR TCA 72 bp | ATTTCCAGTCAGGGAAGTAGGGAGGTCAAGTGCCTTTaGAAAGCTCAATGCAGAACAAGACTAAGAGAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: ISSQGSREVKCL*KAQCRTRLREG Trigger: GCCTTCTCTTAGTCTTGTTCTGCATTGAGCTTTTCAAAGGCACTTGACCTCCCTACTTCCCTGACTGGAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| 3UTR CCA 72 bp | AAGACACAAGAGCACTGGCAATCACTGGAGAAAGCATaGTTTCCAATAGCCACATCTCCTGGCAATAGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: KTQEHWQSLEKA*FPIATSPGNSQ Trigger: TTGACTATTGCCAGGAGATGTGGCTATTGGAAACCATGCTTTCTCCAGTGATTGCCAGTGCTCTTGTGTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| 3UTR TCA 72 bp | ACATACTCTTTCGAGGTCTATACTGAGAACAGTCACTaGGGCCATGCTCAATCATGCCTGGAAAAAGGGATA | + |
|
Preference number: 3 (lower is better) Translates to: TYSFEVYTENSH*GHAQSCLEKGI Trigger: TATCCCTTTTTCCAGGCATGATTGAGCATGGCCTCAGTGACTGTTCTCAGTATAGACCTCGAAAGAGTATGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177249.3 |
||
| 3UTR GCA 72 bp | AATGTGAAAAGCAGAAAGACTGAGGAAGTCCTGTCATaGACTCTACTTTGCTGCCCAAGAAAGCCAACTGTT | + |
|
Preference number: 3 (lower is better) Translates to: NVKSRKTEEVLS*TLLCCPRKPTV Trigger: AACAGTTGGCTTTCTTGGGCAGCAAAGTAGAGTGCATGACAGGACTTCCTCAGTCTTTCTGCTTTTCACATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| 3UTR CCA 72 bp | TTTACCTTTGTAAAGATGGCCAGAGGCATGCCATATTaGTCTTCTTCCAAACCAGAAATGAGCCCTGGTATC | + |
|
Preference number: 3 (lower is better) Translates to: FTFVKMARGMPY*SSSKPEMSPGI Trigger: GATACCAGGGCTCATTTCTGGTTTGGAAGAAGACCAATATGGCATGCCTCTGGCCATCTTTACAAAGGTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177249.3 |
||
| 3UTR GCA 72 bp | CTCCAGACTCACAGCTTGTATTCTCTTCCTTATCTGTaGCTTTGTCGTTACACTACGATCAAAACTACCTCA | + |
|
Preference number: 3 (lower is better) Translates to: LQTHSLYSLPYL*LCRYTTIKTTS Trigger: TGAGGTAGTTTTGATCGTAGTGTAACGACAAAGGCACAGATAAGGAAGAGAATACAAGCTGTGAGTCTGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| 3UTR CCA 72 bp | AAAGCTCAATGCAGAACAAGACTAAGAGAAGGCCTGTaGATCTATCCAGATCCAACAGACAACCATTCACAA | + |
|
Preference number: 3 (lower is better) Translates to: KAQCRTRLREGL*IYPDPTDNHSQ Trigger: TTGTGAATGGTTGTCTGTTGGATCTGGATAGATCCACAGGCCTTCTCTTAGTCTTGTTCTGCATTGAGCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| 3UTR CCA 72 bp | AGTTACAAACACTCAGTTCTTAAGACACAAGAGCACTaGCAATCACTGGAGAAAGCATGGTTTCCAATAGCC | + |
|
Preference number: 3 (lower is better) Translates to: SYKHSVLKTQEH*QSLEKAWFPIA Trigger: GGCTATTGGAAACCATGCTTTCTCCAGTGATTGCCAGTGCTCTTGTGTCTTAAGAACTGAGTGTTTGTAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| 3UTR GCA 72 bp | TTCCGCTACGGTTGTAATTTCATCCATTCAGCATACTaGAACTTTCATTTAGATAGAGTGCAACCGTCCATG | + |
|
Preference number: 3 (lower is better) Translates to: FRYGCNFIHSAY*NFHLDRVQPSM Trigger: CATGGACGGTTGCACTCTATCTAAATGAAAGTTGCAGTATGCTGAATGGATGAAATTACAACCGTAGCGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| 3UTR CCA 72 bp | CATTCTGTCATAGTTAAAGGCTACCAGAAGATGGTGTaGAAAGCCATGAATGCTGGGCCATTTCTCTTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: HSVIVKGYQKMV*KAMNAGPFLFK Trigger: TTTAAAGAGAAATGGCCCAGCATTCATGGCTTTCCACACCATCTTCTGGTAGCCTTTAACTATGACAGAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| 3UTR GCA 72 bp | CTAGCAATGTCAACTACCATGGATATATCAGCATGCTaGAGCCACATGAAATGGTATCTAACAAGGAATTCT | + |
|
Preference number: 3 (lower is better) Translates to: LAMSTTMDISAC*SHMKWYLTRNS Trigger: AGAATTCCTTGTTAGATACCATTTCATGTGGCTGCAGCATGCTGATATATCCATGGTAGTTGACATTGCTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| 3UTR GCA 72 bp | TTTGTGTGTGTGAATATAAGAATTTGCACGACACATTaGCTACATGGAGGTCAGAGGACAATTTTCAAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: FVCVNIRICTTH*LHGGQRTIFKS Trigger: ACTCTTGAAAATTGTCCTCTGACCTCCATGTAGGCAATGTGTCGTGCAAATTCTTATATTCACACACACAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| 3UTR CCA 72 bp | TGTGAATATAAGAATTTGCACGACACATTGCCTACATaGAGGTCAGAGGACAATTTTCAAGAGTTGGTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: CEYKNLHDTLPT*RSEDNFQELVL Trigger: AAGAACCAACTCTTGAAAATTGTCCTCTGACCTCCATGTAGGCAATGTGTCGTGCAAATTCTTATATTCACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| 3UTR-3UTR CAA 90 bp | CATGGGAAGCTGATGAAAAATACGATTGGAAACCCCTTAAATTGCGTTCCATATTGTGAATATAAGAATTaGCACGACACATTGCCTACA | + |
|
Preference number: 3 (lower is better) Translates to: HGKLMKNTIGNPLNCVPYCEYKN*HDTLPT Trigger: TGTAGGCAATGTGTCGTGCAAATTCTTATATTCACA...ATATGGAACGCAATTTAAGGGGTTTCCAATCGTATTTTTCATCAGCTTCCCATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| 3UTR GCA 72 bp | ATACTGATGTCAAAATACTCTCCATTCAGACTTAAGTaGCCTGTTTCTCAGCCATGTAATAGCTTCTCATTT | + |
|
Preference number: 3 (lower is better) Translates to: ILMSKYSPFRLK*PVSQPCNSFSF Trigger: AAATGAGAAGCTATTACATGGCTGAGAAACAGGGCACTTAAGTCTGAATGGAGAGTATTTTGACATCAGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| 3UTR GCA 72 bp | CAAGGAATTCTTAATAGTCTCAGCACAACATTAATGTaGCTTTCACAGTTTTGTGTGGCTTTAGTTTCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: QGILNSLSTTLM*LSQFCVALVSS Trigger: AGAAGAAACTAAAGCCACACAAAACTGTGAAAGGCACATTAATGTTGTGCTGAGACTATTAAGAATTCCTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| 3UTR CCA 72 bp | ATACTATGTGCATGGGAAGCTGATGAAAAATACGATTaGAAACCCCTTAAATTGCGTTCCATATACATGATT | + |
|
Preference number: 3 (lower is better) Translates to: ILCAWEADEKYD*KPLKLRSIYMI Trigger: AATCATGTATATGGAACGCAATTTAAGGGGTTTCCAATCGTATTTTTCATCAGCTTCCCATGCACATAGTAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| 3UTR CAA 72 bp | GCCCTTCAGTGCGGCTCAGTCACCACTGCTGCTTCCTaGCACAGCACTGCCAATAGGAGAAGCACAGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ALQCGSVTTAAS*HSTANRRSTGA Trigger: TGCCCCTGTGCTTCTCCTATTGGCAGTGCTGTGCAAGGAAGCAGCAGTGGTGACTGAGCCGCACTGAAGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| CDS-3UTR GCA 90 bp | GCTCACTGGCTGTATCTCCTGTTCTCCATGACACAGGCTGCTGCATTAGGTGATCCGACCACCACGATGTaGAGGACAGGCCCGCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: AHWLYLLFSMTQAAALGDPTTTM*RTGPQG Trigger: CCCCTGCGGGCCTGTCCTGCACATCGTGGTGGTCGG...ATCACCTAATGCAGCAGCCTGTGTCATGGAGAACAGGAGATACAGCCAGTGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| CDS-3UTR TCA 90 bp | TGGATAGAAGAAGAAACCCTGGGAGCAGCAGACGGGGAGGGAGCATTACACCGCGAGGGATTACTTTCCTaGGGTCCAGCATCTTCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: WIEEETLGAADGEGALHREGLLS*GPASSD Trigger: GTCTGAAGATGCTGGACCTCAGGAAAGTAATCCCTC...GCGGTGTAATGCTCCCTCCCCGTCTGCTGCTCCCAGGGTTTCTTCTTCTATCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| CDS-3UTR GCA 90 bp | ATCTTCAGACATACTCTTTCGAGGTCTATACTGAGAACAGTCACTGAGGCCATGCCGACCACCACGATGTaGAGGACAGGCCCGCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: IFRHTLSRSILRTVTEAMPTTTM*RTGPQG Trigger: CCCCTGCGGGCCTGTCCTGCACATCGTGGTGGTCGG...CATGGCCTCAGTGACTGTTCTCAGTATAGACCTCGAAAGAGTATGTCTGAAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177249.3 |
||
| CDS-3UTR GCA 90 bp | TGGATAGAAGAAGAAACCCTGGGAGCAGCAGACGGGGAGGGAGCATTACACCGCTGGTCTGACCCCATCTaGTCCCTTTCTTTCAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WIEEETLGAADGEGALHRWSDPI*SLSFKL Trigger: CAGCTTGAAAGAAAGGGAGCAGATGGGGTCAGACCA...GCGGTGTAATGCTCCCTCCCCGTCTGCTGCTCCCAGGGTTTCTTCTTCTATCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| CDS-3UTR CCA 90 bp | TGGATAGAAGAAGAAACCCTGGGAGCAGCAGACGGGGAGGGAGCATTACACCGCTGGAATAAGTGTGTCTaGTCTGACCCCATCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: WIEEETLGAADGEGALHRWNKCV*SDPICS Trigger: GGAGCAGATGGGGTCAGACCAGACACACTTATTCCA...GCGGTGTAATGCTCCCTCCCCGTCTGCTGCTCCCAGGGTTTCTTCTTCTATCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| CDS-3UTR CCA 90 bp | TGGAGGCTGCAGCAGACACTGCCTGTGGGTATAAATCAGGATGCTGGCCGCAGGCAGCTTCCTAAGTTCTaGATCGTGGATCTGGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: WRLQQTLPVGINQDAGRRQLPKF*IVDLDQ Trigger: CTGATCCAGATCCACGATCCAGAACTTAGGAAGCTG...CCTGCGGCCAGCATCCTGATTTATACCCACAGGCAGTGTCTGCTGCAGCCTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| 3UTR CAA 72 bp | GAGCCCTGGTATCAGGACCACCTGCCTGTTATTAGCTaGAGGCTGTACAGTAATTGGAGGACTGTCCGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: EPWYQDHLPVIS*RLYSNWRTVRG Trigger: CCCTCGGACAGTCCTCCAATTACTGTACAGCCTCAAGCTAATAACAGGCAGGTGGTCCTGATACCAGGGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177249.3 |
||
| CDS-3UTR GCA 90 bp | CAACACATGAACAGGCTGGTGCAGCTAGCACCACAGGCAGGAGGCAGCAGCTTCGTGGATCTGGATCAGTaGTTCTTCCACTTCCACAAT | + |
|
Preference number: 4 (lower is better) Translates to: QHMNRLVQLAPQAGGSSFVDLDQ*FFHFHN Trigger: ATTGTGGAAGTGGAAGAAGCACTGATCCAGATCCAC...GAAGCTGCTGCCTCCTGCCTGTGGTGCTAGCTGCACCAGCCTGTTCATGTGTTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| CDS-3UTR GCA 90 bp | CTGTCAATGTCTGCCTGCTGGAAACCTGAAAAATGCTGGTTGACTTTCGCTCCTCACCCTCCCAGCCGGTaGCATCCAGGAAGACATCGT | + |
|
Preference number: 4 (lower is better) Translates to: LSMSACWKPEKCWLTFAPHPPSR*HPGRHR Trigger: ACGATGTCTTCCTGGATGGCACCGGCTGGGAGGGTG...AGGAGCGAAAGTCAACCAGCATTTTTCAGGTTTCCAGCAGGCAGACATTGACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| CDS-3UTR CCA 90 bp | TGGATAGAAGAAGAAACCCTGGGAGCAGCAGACGGGGAGGGAGCATTACACCGCCTAAGTTCTGGATCGTaGATCTGGATCAGTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: WIEEETLGAADGEGALHRLSSGS*IWISAS Trigger: AGAAGCACTGATCCAGATCCACGATCCAGAACTTAG...GCGGTGTAATGCTCCCTCCCCGTCTGCTGCTCCCAGGGTTTCTTCTTCTATCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| CDS-3UTR CCA 90 bp | CTGTCAATGTCTGCCTGCTGGAAACCTGAAAAATGCTGGTTGACTTTCGCTCCTGGGCTTCCCATTGGGTaGCTCAGGAAGACTCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSMSACWKPEKCWLTFAPGLPIG*LRKTLR Trigger: CCTCAGAGTCTTCCTGAGCCACCCAATGGGAAGCCC...AGGAGCGAAAGTCAACCAGCATTTTTCAGGTTTCCAGCAGGCAGACATTGACAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| CDS-3UTR TCA 90 bp | GCTCTACATCCTGTTACACGCAGCTTCAGAATTTCTACTCTACTCCAGACTCACCAGCCCTTCTTGTGGTaGAAGCCGACCACCACGATG | + |
|
Preference number: 4 (lower is better) Translates to: ALHPVTRSFRISTLLQTHQPFLW*KPTTTM Trigger: CATCGTGGTGGTCGGCTTTCACCACAAGAAGGGCTG...GTGAGTCTGGAGTAGAGTAGAAATTCTGAAGCTGCGTGTAACAGGATGTAGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| CDS-3UTR GCA 90 bp | CTGTCAATGTCTGCCTGCTGGAAACCTGAAAAATGCTGGTTGACTTTCGCTCCTAGCGTGGATGTAGACTaGAAACTGGGCCCGGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSMSACWKPEKCWLTFAPSVDVD*KLGPDP Trigger: TGGATCCGGGCCCAGTTTGCAGTCTACATCCACGCT...AGGAGCGAAAGTCAACCAGCATTTTTCAGGTTTCCAGCAGGCAGACATTGACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| CDS-3UTR TCA 90 bp | TACTTTCCTGAGGTCCAGCATCTTCAGACATACTCTTTCGAGGTCTATACTGAGCAGCCCTTCTTGTGGTaGAAGCCGACCACCACGATG | + |
|
Preference number: 4 (lower is better) Translates to: YFPEVQHLQTYSFEVYTEQPFLW*KPTTTM Trigger: CATCGTGGTGGTCGGCTTTCACCACAAGAAGGGCTG...CTCAGTATAGACCTCGAAAGAGTATGTCTGAAGATGCTGGACCTCAGGAAAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177249.3 |
||
| CDS-3UTR TCA 90 bp | GCTCACTGGCTGTATCTCCTGTTCTCCATGACACAGGCTGCTGCATTAGGTGATACATCAGAGAGAAGATaGTGCTGCTGCAATGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: AHWLYLLFSMTQAAALGDTSERR*CCCNAM Trigger: CATGGCATTGCAGCAGCATCATCTTCTCTCTGATGT...ATCACCTAATGCAGCAGCCTGTGTCATGGAGAACAGGAGATACAGCCAGTGAGC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| CDS-3UTR TCA 90 bp | TGGATAGAAGAAGAAACCCTGGGAGCAGCAGACGGGGAGGGAGCATTACACCGCGTTTGGATTTATCTCTaGAAGTGCCGGATGCTTATT | + |
|
Preference number: 4 (lower is better) Translates to: WIEEETLGAADGEGALHRVWIYL*KCRMLI Trigger: AATAAGCATCCGGCACTTTCAGAGATAAATCCAAAC...GCGGTGTAATGCTCCCTCCCCGTCTGCTGCTCCCAGGGTTTCTTCTTCTATCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| CDS-3UTR GCA 90 bp | GCTCACTGGCTGTATCTCCTGTTCTCCATGACACAGGCTGCTGCATTAGGTGATATGGCATCACTGAGGTaGTTCTGTTGTCGGAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: AHWLYLLFSMTQAAALGDMASLR*FCCRKR Trigger: CCTTTTCCGACAACAGAAGCACCTCAGTGATGCCAT...ATCACCTAATGCAGCAGCCTGTGTCATGGAGAACAGGAGATACAGCCAGTGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| CDS-3UTR CCA 90 bp | CTGTCAATGTCTGCCTGCTGGAAACCTGAAAAATGCTGGTTGACTTTCGCTCCTAGGCTGTACAGTAATTaGAGGACTGTCCGAGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSMSACWKPEKCWLTFAPRLYSN*RTVRGQ Trigger: CTGCCCTCGGACAGTCCTCCAATTACTGTACAGCCT...AGGAGCGAAAGTCAACCAGCATTTTTCAGGTTTCCAGCAGGCAGACATTGACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| CDS-3UTR TCA 90 bp | CTGTCAATGTCTGCCTGCTGGAAACCTGAAAAATGCTGGTTGACTTTCGCTCCTTTCCCAGTCACTTTCTaGAGACTCTGGAGATGGACG | + |
|
Preference number: 4 (lower is better) Translates to: LSMSACWKPEKCWLTFAPFPVTF*RLWRWT Trigger: CGTCCATCTCCAGAGTCTTCAGAAAGTGACTGGGAA...AGGAGCGAAAGTCAACCAGCATTTTTCAGGTTTCCAGCAGGCAGACATTGACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| CDS-3UTR TCA 90 bp | GCTCTACATCCTGTTACACGCAGCTTCAGAATTTCTACTCTACTCCAGACTCACCCACAATGGCATCACTaGGGTGCTTCTGTTGTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: ALHPVTRSFRISTLLQTHPQWHH*GASVVG Trigger: TCCGACAACAGAAGCACCTCAGTGATGCCATTGTGG...GTGAGTCTGGAGTAGAGTAGAAATTCTGAAGCTGCGTGTAACAGGATGTAGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| CDS-3UTR GCA 90 bp | GCTCACTGGCTGTATCTCCTGTTCTCCATGACACAGGCTGCTGCATTAGGTGATAAACCAAGATACACCTaGGATCCTTCTAATGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: AHWLYLLFSMTQAAALGDKPRYT*DPSNEA Trigger: GGCCTCATTAGAAGGATCGCAGGTGTATCTTGGTTT...ATCACCTAATGCAGCAGCCTGTGTCATGGAGAACAGGAGATACAGCCAGTGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| CDS-3UTR CCA 90 bp | ACTGCTGCTTCCTTGCACAGCACTGCCAATAGGAGAAGCACAGGGGCATCTTTGTCTTCAGGTAAAGTGTaGCTATCATGTCCATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TAASLHSTANRRSTGASLSSGKV*LSCPSP Trigger: AGGAGATGGACATGATAGCCACACTTTACCTGAAGA...CAAAGATGCCCCTGTGCTTCTCCTATTGGCAGTGCTGTGCAAGGAAGCAGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| CDS-3UTR TCA 90 bp | TACTTTCCTGAGGTCCAGCATCTTCAGACATACTCTTTCGAGGTCTATACTGAGGAACAGTCTCTCTGGTaGTGTCGGCTTGCCTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: YFPEVQHLQTYSFEVYTEEQSLW*CRLASL Trigger: AAGTGAGGCAAGCCGACATCACCAGAGAGACTGTTC...CTCAGTATAGACCTCGAAAGAGTATGTCTGAAGATGCTGGACCTCAGGAAAGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177249.3 |
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| CDS-3UTR TCA 90 bp | GCAGAGAGTCCTTTTGGAATAAGTGTGTCTGGTCTGACCCCATCTGCTCCCTTTACCTTGTGTCGAAAATaGAGGACAAGATCTCGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: AESPFGISVSGLTPSAPFTLCRK*RTRSRG Trigger: TCCTCGAGATCTTGTCCTTCATTTTCGACACAAGGT...AAAGGGAGCAGATGGGGTCAGACCAGACACACTTATTCCAAAAGGACTCTCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000177249.3 |
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| CDS-3UTR TCA 90 bp | GGTCAAGTGCCTTTGAAAAGCTCAATGCAGAACAAGACTAAGAGAAGGCCTGTGCTTCCAAACCAGAAATaGGCCCTGGTATCAGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: GQVPLKSSMQNKTKRRPVLPNQK*ALVSGP Trigger: TGGTCCTGATACCAGGGCTCATTTCTGGTTTGGAAG...CACAGGCCTTCTCTTAGTCTTGTTCTGCATTGAGCTTTTCAAAGGCACTTGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| CDS-3UTR TCA 90 bp | CTGGCCGCAGGACTTCTAAATTTATCAACATGGAAGGAAGAGAGCCACTGGCTGCAAATCCCCGAACAGTaGCATCAGAGAGAAGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: LAAGLLNLSTWKEESHWLQIPEQ*HQREDD Trigger: ATCATCTTCTCTCTGATGTCACTGTTCGGGGATTTG...CAGCCAGTGGCTCTCTTCCTTCCATGTTGATAAATTTAGAAGTCCTGCGGCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| CDS-3UTR GCA 90 bp | AGAGGCATGCCATATTGGTCTTCTTCCAAACCAGAAATGAGCCCTGGTATCAGGCTGGTGATGTCGGCTTaGCTCACTTTTAATGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RGMPYWSSSKPEMSPGIRLVMSA*LTFNAL Trigger: CAAGGCATTAAAAGTGAGGCAAGCCGACATCACCAG...CCTGATACCAGGGCTCATTTCTGGTTTGGAAGAAGACCAATATGGCATGCCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177249.3 |
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| CDS-3UTR GCA 90 bp | CTGTCAATGTCTGCCTGCTGGAAACCTGAAAAATGCTGGTTGACTTTCGCTCCTCAGTCACTGAGGCCATaGTCAATCATGCCTGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LSMSACWKPEKCWLTFAPQSLRP*SIMPGK Trigger: TTTTCCAGGCATGATTGAGCATGGCCTCAGTGACTG...AGGAGCGAAAGTCAACCAGCATTTTTCAGGTTTCCAGCAGGCAGACATTGACAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| CDS-3UTR CCA 90 bp | GCTCACTGGCTGTATCTCCTGTTCTCCATGACACAGGCTGCTGCATTAGGTGATAGAGGCATGCCATATTaGTCTTCTTCCAAACCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: AHWLYLLFSMTQAAALGDRGMPY*SSSKPE Trigger: TTCTGGTTTGGAAGAAGACCAATATGGCATGCCTCT...ATCACCTAATGCAGCAGCCTGTGTCATGGAGAACAGGAGATACAGCCAGTGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| CDS-3UTR TCA 90 bp | CTGTCAATGTCTGCCTGCTGGAAACCTGAAAAATGCTGGTTGACTTTCGCTCCTACGGAGTACTGGCCTTaGAAAGGATGGTTTGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: LSMSACWKPEKCWLTFAPTEYWP*KGWFGF Trigger: AAATCCAAACCATCCTTTTCAAGGCCAGTACTCCGT...AGGAGCGAAAGTCAACCAGCATTTTTCAGGTTTCCAGCAGGCAGACATTGACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| CDS-3UTR GCA 90 bp | CCCAACCTGGAAAGCTATTCCGCTACGGTTGTAATTTCATCCATTCAGCATACTCTGGTGATGTCGGCTTaGCTCACTTTTAATGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PNLESYSATVVISSIQHTLVMSA*LTFNAL Trigger: CAAGGCATTAAAAGTGAGGCAAGCCGACATCACCAG...AGTATGCTGAATGGATGAAATTACAACCGTAGCGGAATAGCTTTCCAGGTTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| CDS-3UTR GCA 90 bp | GGTCAAGTGCCTTTGAAAAGCTCAATGCAGAACAAGACTAAGAGAAGGCCTGTGAGACATAGCTGTCTTTaGACTGGAAAAAGCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GQVPLKSSMQNKTKRRPVRHSCL*TGKSSS Trigger: GGAGGAGCTTTTTCCAGTGCAAAGACAGCTATGTCT...CACAGGCCTTCTCTTAGTCTTGTTCTGCATTGAGCTTTTCAAAGGCACTTGACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| CDS-3UTR CCA 90 bp | ATGCCATATTGGTCTTCTTCCAAACCAGAAATGAGCCCTGGTATCAGGACCACCTCTTCAGGTAAAGTGTaGCTATCATGTCCATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: MPYWSSSKPEMSPGIRTTSSGKV*LSCPSP Trigger: AGGAGATGGACATGATAGCCACACTTTACCTGAAGA...GGTGGTCCTGATACCAGGGCTCATTTCTGGTTTGGAAGAAGACCAATATGGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177249.3 |
||
| CDS-3UTR CCA 90 bp | GGTCAAGTGCCTTTGAAAAGCTCAATGCAGAACAAGACTAAGAGAAGGCCTGTGACAGCATCTTCGCCATaGTTTACTGCCATGACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GQVPLKSSMQNKTKRRPVTASSP*FTAMTL Trigger: AAGAGTCATGGCAGTAAACCATGGCGAAGATGCTGT...CACAGGCCTTCTCTTAGTCTTGTTCTGCATTGAGCTTTTCAAAGGCACTTGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| 3UTR CAA 72 bp | TCAATGTCTGCCTGCTGGAAACCTGAAAAATGCTGGTaGACTTTCGCTCCTGCAGGTCTAGTTACAAACACT | + |
|
Preference number: 4 (lower is better) Translates to: SMSACWKPEKCW*TFAPAGLVTNT Trigger: AGTGTTTGTAACTAGACCTGCAGGAGCGAAAGTCAACCAGCATTTTTCAGGTTTCCAGCAGGCAGACATTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| CDS-3UTR TCA 90 bp | ACATGCACAATCTTTTCATTTTGGAGTGTTATAGTATACGAGGCAGCCAGTTTCGAACAGTCTCTCTGGTaGTGTCGGCTTGCCTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: TCTIFSFWSVIVYEAASFEQSLW*CRLASL Trigger: AAGTGAGGCAAGCCGACATCACCAGAGAGACTGTTC...GAAACTGGCTGCCTCGTATACTATAACACTCCAAAATGAAAAGATTGTGCATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| CDS-3UTR TCA 90 bp | GTAAGTATGTTTAAGTGGGTAGAAGGTTTCCTCCAACCCTCCCATAGAAGTCCAACACAGACACTTTTCTaGACAGTCTCTCTGGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: VSMFKWVEGFLQPSHRSPTQTLF*TVSLVM Trigger: CATCACCAGAGAGACTGTTCAGAAAAGTGTCTGTGT...TGGACTTCTATGGGAGGGTTGGAGGAAACCTTCTACCCACTTAAACATACTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| CDS-3UTR TCA 90 bp | GGTCAAGTGCCTTTGAAAAGCTCAATGCAGAACAAGACTAAGAGAAGGCCTGTGTGCCTGTTATTAGCTTaGGGCTGTACAGTAATTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GQVPLKSSMQNKTKRRPVCLLLA*GCTVIG Trigger: TCCAATTACTGTACAGCCTCAAGCTAATAACAGGCA...CACAGGCCTTCTCTTAGTCTTGTTCTGCATTGAGCTTTTCAAAGGCACTTGACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| CDS-3UTR CCA 90 bp | TCCGTCTTGGGCACAGCATCTTCGCCATGGTTTACTGCCATGACTCTTGTGACATCACTTTTAATGCCTTaGCTTCAATTTGTCGATAAC | + |
|
Preference number: 4 (lower is better) Translates to: SVLGTASSPWFTAMTLVTSLLMP*LQFVDN Trigger: GTTATCGACAAATTGAAGCCAAGGCATTAAAAGTGA...TGTCACAAGAGTCATGGCAGTAAACCATGGCGAAGATGCTGTGCCCAAGACGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177249.3 |
||
| CDS-3UTR CCA 90 bp | ACATGCACAATCTTTTCATTTTGGAGTGTTATAGTATACGAGGCAGCCAGTTTCACCAGAAATGAGCCCTaGTATCAGGACCACCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TCTIFSFWSVIVYEAASFTRNEP*YQDHLP Trigger: AGGCAGGTGGTCCTGATACCAGGGCTCATTTCTGGT...GAAACTGGCTGCCTCGTATACTATAACACTCCAAAATGAAAAGATTGTGCATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| CDS-3UTR TCA 90 bp | AGTAAACGCTTTTCCTCACTAAATCATCTCCTTGGCCAACTTCTTGCTTTTCTAACTGAGAACAGTCACTaGGGCCATGCTCAATCATGC | + |
|
Preference number: 4 (lower is better) Translates to: SKRFSSLNHLLGQLLAFLTENSH*GHAQSC Trigger: GCATGATTGAGCATGGCCTCAGTGACTGTTCTCAGT...TAGAAAAGCAAGAAGTTGGCCAAGGAGATGATTTAGTGAGGAAAAGCGTTTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| CDS-3UTR GCA 90 bp | ACTGCCATGACTCTTGTGACAGTTTCCAAGCTGGTATTTAAGACGTCAGAAGTAAAACCAAGATACACCTaGGATCCTTCTAATGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TAMTLVTVSKLVFKTSEVKPRYT*DPSNEA Trigger: GGCCTCATTAGAAGGATCGCAGGTGTATCTTGGTTT...TACTTCTGACGTCTTAAATACCAGCTTGGAAACTGTCACAAGAGTCATGGCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177249.3 |
||
| CDS-3UTR CCA 90 bp | CTGGCCGCAGGACTTCTAAATTTATCAACATGGAAGGAAGAGAGCCACTGGCTGTCACTTTTAATGCCTTaGCTTCAATTTGTCGATAAC | + |
|
Preference number: 4 (lower is better) Translates to: LAAGLLNLSTWKEESHWLSLLMP*LQFVDN Trigger: GTTATCGACAAATTGAAGCCAAGGCATTAAAAGTGA...CAGCCAGTGGCTCTCTTCCTTCCATGTTGATAAATTTAGAAGTCCTGCGGCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| 3UTR CAA 72 bp | ATAGAGTGCAACCGTCCATGTAAACAGTTTATCATCTaGGTCCCTGGGTATGGACCTTTGGATAGAAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: IECNRPCKQFII*VPGYGPLDRRR Trigger: TCTTCTTCTATCCAAAGGTCCATACCCAGGGACCAAGATGATAAACTGTTTACATGGACGGTTGCACTCTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| 3UTR CAA 72 bp | CATTTGAGGTGTCTTTGTGTGTGTGAATATAAGAATTaGCACGACACATTGCCTACATGGAGGTCAGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: HLRCLCVCEYKN*HDTLPTWRSED Trigger: GTCCTCTGACCTCCATGTAGGCAATGTGTCGTGCAAATTCTTATATTCACACACACAAAGACACCTCAAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| 3UTR CAA 72 bp | GACTCACAGCTTGTATTCTCTTCCTTATCTGTGCCTTaGTCGTTACACTACGATCAAAACTACCTCAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: DSQLVFSSLSVP*SLHYDQNYLNS Trigger: GCTGTTGAGGTAGTTTTGATCGTAGTGTAACGACAAAGGCACAGATAAGGAAGAGAATACAAGCTGTGAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| CDS-3UTR TCA 90 bp | AGTAAACGCTTTTCCTCACTAAATCATCTCCTTGGCCAACTTCTTGCTTTTCTATTTCGAGGTCTATACTaGGAACAGTCACTGAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SKRFSSLNHLLGQLLAFLFRGLY*EQSLRP Trigger: TGGCCTCAGTGACTGTTCTCAGTATAGACCTCGAAA...TAGAAAAGCAAGAAGTTGGCCAAGGAGATGATTTAGTGAGGAAAAGCGTTTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
||
| CDS-3UTR TCA 90 bp | CATGGGAAGCTGATGAAAAATACGATTGGAAACCCCTTAAATTGCGTTCCATATACCTTGTGTCGAAAATaGAGGACAAGATCTCGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: HGKLMKNTIGNPLNCVPYTLCRK*RTRSRG Trigger: TCCTCGAGATCTTGTCCTTCATTTTCGACACAAGGT...ATATGGAACGCAATTTAAGGGGTTTCCAATCGTATTTTTCATCAGCTTCCCATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| CDS-3UTR GCA 90 bp | ACATGCACAATCTTTTCATTTTGGAGTGTTATAGTATACGAGGCAGCCAGTTTCGGCCATGCTCAATCATaGCTGGAAAAAGGGATAACA | + |
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Preference number: 4 (lower is better) Translates to: TCTIFSFWSVIVYEAASFGHAQS*LEKGIT Trigger: TGTTATCCCTTTTTCCAGGCATGATTGAGCATGGCC...GAAACTGGCTGCCTCGTATACTATAACACTCCAAAATGAAAAGATTGTGCATGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| CDS-3UTR GCA 90 bp | GTAAGTATGTTTAAGTGGGTAGAAGGTTTCCTCCAACCCTCCCATAGAAGTCCAAGAAGTAAAATCATCTaGAGAGGGATTACTTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: VSMFKWVEGFLQPSHRSPRSKII*RGITFL Trigger: CAGGAAAGTAATCCCTCTGCAGATGATTTTACTTCT...TGGACTTCTATGGGAGGGTTGGAGGAAACCTTCTACCCACTTAAACATACTTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| CDS-3UTR GCA 90 bp | CATGGGAAGCTGATGAAAAATACGATTGGAAACCCCTTAAATTGCGTTCCATATTCTGAAAGTGCCGGATaGTTATTGCTGTTCCATACC | + |
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Preference number: 4 (lower is better) Translates to: HGKLMKNTIGNPLNCVPYSESAG*LLLFHT Trigger: GGTATGGAACAGCAATAAGCATCCGGCACTTTCAGA...ATATGGAACGCAATTTAAGGGGTTTCCAATCGTATTTTTCATCAGCTTCCCATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| CDS-3UTR TCA 90 bp | CATGGGAAGCTGATGAAAAATACGATTGGAAACCCCTTAAATTGCGTTCCATATCCACGTTCACTATTCTaGACAGAATGTGAGAATCTG | + |
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Preference number: 4 (lower is better) Translates to: HGKLMKNTIGNPLNCVPYPRSLF*TECENL Trigger: CAGATTCTCACATTCTGTTCAGAATAGTGAACGTGG...ATATGGAACGCAATTTAAGGGGTTTCCAATCGTATTTTTCATCAGCTTCCCATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| CDS-3UTR GCA 90 bp | TCCAACAGACAACCATTCACAAGAAACAAGGCACATAATTTTGATAACAAAGTGAGATGGCCAGAGGCATaGCATATTGGTCTTCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: SNRQPFTRNKAHNFDNKVRWPEA*HIGLLP Trigger: TGGAAGAAGACCAATATGGCATGCCTCTGGCCATCT...CACTTTGTTATCAAAATTATGTGCCTTGTTTCTTGTGAATGGTTGTCTGTTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| 3UTR CAA 72 bp | CTTTGTGTGTGTGAATATAAGAATTTGCACGACACATaGCCTACATGGAGGTCAGAGGACAATTTTCAAGAG | + |
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Preference number: 4 (lower is better) Translates to: LCVCEYKNLHDT*PTWRSEDNFQE Trigger: CTCTTGAAAATTGTCCTCTGACCTCCATGTAGGCAATGTGTCGTGCAAATTCTTATATTCACACACACAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| CDS-3UTR GCA 90 bp | ACATGCACAATCTTTTCATTTTGGAGTGTTATAGTATACGAGGCAGCCAGTTTCCATAAAGAGGCAGCTTaGTTAAAACACAGACACTTT | + |
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Preference number: 4 (lower is better) Translates to: TCTIFSFWSVIVYEAASFHKEAA*LKHRHF Trigger: AAAGTGTCTGTGTTTTAAGCAAGCTGCCTCTTTATG...GAAACTGGCTGCCTCGTATACTATAACACTCCAAAATGAAAAGATTGTGCATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| 3UTR CAA 72 bp | AGAGCTAGTGAAGGACTTGGGGGTGGACAATTCATGTaGGTTATAAATCAGATATACATATACAATTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: RASEGLGGGQFM*VINQIYIYNCS Trigger: AGAGCAATTGTATATGTATATCTGATTTATAACCAACATGAATTGTCCACCCCCAAGTCCTTCACTAGCTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| CDS GCA 90 bp | CTGCAAACTGGGCCCGGATCCATTCGTCACCACCCTCCCAGCCGGTaGCATCCAGGAAGACATCGTCCCGGTTCTCAGTCACGTGCCTCA | + |
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Preference number: 5 (lower is better) Translates to: LQTGPGSIRHHPPSR*HPGRHRPGSQSRAS Trigger: TGAGGCACGTGACTGAGAACCGGGACGATGTCTTCCTGGATGGCACCGGCTGGGAGGGTGGTGACGAATGGATCCGGGCCCAGTTTGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| CDS-3UTR CAA 90 bp | TGGAGGCTGCAGCAGACACTGCCTGTGGGTATAAATCAGGATGCTGGCCGCAGGACTGAGGTGCTTCTGTaGTCGGAAAAGGATGTTAGT | + |
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Preference number: 5 (lower is better) Translates to: WRLQQTLPVGINQDAGRRTEVLL*SEKDVS Trigger: ACTAACATCCTTTTCCGACAACAGAAGCACCTCAGT...CCTGCGGCCAGCATCCTGATTTATACCCACAGGCAGTGTCTGCTGCAGCCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| CDS-3UTR CAA 90 bp | TGGAGGCTGCAGCAGACACTGCCTGTGGGTATAAATCAGGATGCTGGCCGCAGGTCCTGTCCTTTGTTGTaGTTACCTTCTACTTGGAAG | + |
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Preference number: 5 (lower is better) Translates to: WRLQQTLPVGINQDAGRRSCPLL*LPSTWK Trigger: CTTCCAAGTAGAAGGTAACAACAACAAAGGACAGGA...CCTGCGGCCAGCATCCTGATTTATACCCACAGGCAGTGTCTGCTGCAGCCTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| CDS CCA 90 bp | AGGTCAGCCGTCGTTGGGTTAAGCAGCTTCCTAAGTTCTGGATCGTaGATCTGGATCAGTGCTTCTTCCACTTCCACAATGGCATCACTG | + |
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Preference number: 5 (lower is better) Translates to: RSAVVGLSSFLSSGS*IWISASSTSTMASL Trigger: CAGTGATGCCATTGTGGAAGTGGAAGAAGCACTGATCCAGATCCACGATCCAGAACTTAGGAAGCTGCTTAACCCAACGACGGCTGACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| CDS-3UTR CAA 90 bp | GCTCACTGGCTGTATCTCCTGTTCTCCATGACACAGGCTGCTGCATTAGGTGATCACGGAGTACTGGCCTaGAAAAGGATGGTTTGGATT | + |
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Preference number: 5 (lower is better) Translates to: AHWLYLLFSMTQAAALGDHGVLA*KRMVWI Trigger: AATCCAAACCATCCTTTTCAAGGCCAGTACTCCGTG...ATCACCTAATGCAGCAGCCTGTGTCATGGAGAACAGGAGATACAGCCAGTGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| CDS GCA 90 bp | ATCTGGATCAGTGCTTCTTCCACTTCCACAATGGCATCACTGAGGTaGTTCTGTTGTCGGAAAAGGATGTTAGTAGCTCCAGCCACAAAT | + |
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Preference number: 5 (lower is better) Translates to: IWISASSTSTMASLR*FCCRKRMLVAPATN Trigger: ATTTGTGGCTGGAGCTACTAACATCCTTTTCCGACAACAGAAGCACCTCAGTGATGCCATTGTGGAAGTGGAAGAAGCACTGATCCAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| CDS CCA 90 bp | AAACACAGATATCCCTTTGTAAAGATGGCCAGAGGCATGCCATATTaGTCTTCTTCCAAACCAGAAATGAGCCCTGGTATCAGGACCACC | + |
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Preference number: 5 (lower is better) Translates to: KHRYPFVKMARGMPY*SSSKPEMSPGIRTT Trigger: GGTGGTCCTGATACCAGGGCTCATTTCTGGTTTGGAAGAAGACCAATATGGCATGCCTCTGGCCATCTTTACAAAGGGATATCTGTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| CDS-3UTR CAA 90 bp | ACTGCTGCTTCCTTGCACAGCACTGCCAATAGGAGAAGCACAGGGGCATCTTTGCTTGAAAAGGATGGTTaGGATTTATCTCTGAAAGTG | + |
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Preference number: 5 (lower is better) Translates to: TAASLHSTANRRSTGASLLEKDG*DLSLKV Trigger: CACTTTCAGAGATAAATCCAAACCATCCTTTTCAAG...CAAAGATGCCCCTGTGCTTCTCCTATTGGCAGTGCTGTGCAAGGAAGCAGCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| CDS-3UTR CAA 90 bp | CCCAACCTGGAAAGCTATTCCGCTACGGTTGTAATTTCATCCATTCAGCATACTAACGGCTTTTCCTGTTaGTACCACATTCCGGCTGGT | + |
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Preference number: 5 (lower is better) Translates to: PNLESYSATVVISSIQHTNGFSC*YHIPAG Trigger: ACCAGCCGGAATGTGGTACAAACAGGAAAAGCCGTT...AGTATGCTGAATGGATGAAATTACAACCGTAGCGGAATAGCTTTCCAGGTTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| CDS GCA 90 bp | AAATCCCCGAACAGTGACATCAGAGAGAAGATGATGCTGCTGCAATaGCATGTAAGGCAAACACAGATATCCCTTTGTAAAGATGGCCAG | + |
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Preference number: 5 (lower is better) Translates to: KSPNSDIREKMMLLQ*HVRQTQISLCKDGQ Trigger: CTGGCCATCTTTACAAAGGGATATCTGTGTTTGCCTTACATGGCATTGCAGCAGCATCATCTTCTCTCTGATGTCACTGTTCGGGGATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| CDS-3UTR CAA 90 bp | CAGAGGGATTACTTTCCTGAGGTCCAGCATCTTCAGACATACTCTTTCGAGGTCTGCCTTGGCTTCAATTaGTCGATAACAAGAGATACC | + |
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Preference number: 5 (lower is better) Translates to: QRDYFPEVQHLQTYSFEVCLGFN*SITRDT Trigger: GGTATCTCTTGTTATCGACAAATTGAAGCCAAGGCA...GACCTCGAAAGAGTATGTCTGAAGATGCTGGACCTCAGGAAAGTAATCCCTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177249.3 |
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| CDS GCA 90 bp | GAAAAGGATGGTTTGGATTTATCTCTGAAAGTGCCGGATGCTTATTaGTGTTCCATACCCTGTAGTTGTGAGTATTCTTCCAGGCGGCAA | + |
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Preference number: 5 (lower is better) Translates to: EKDGLDLSLKVPDAY*CSIPCSCEYSSRRQ Trigger: TTGCCGCCTGGAAGAATACTCACAACTACAGGGTATGGAACAGCAATAAGCATCCGGCACTTTCAGAGATAAATCCAAACCATCCTTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| CDS-3UTR CAA 90 bp | CCCAACCTGGAAAGCTATTCCGCTACGGTTGTAATTTCATCCATTCAGCATACTCTGCCTGTTATTAGCTaGAGGCTGTACAGTAATTGG | + |
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Preference number: 5 (lower is better) Translates to: PNLESYSATVVISSIQHTLPVIS*RLYSNW Trigger: CCAATTACTGTACAGCCTCAAGCTAATAACAGGCAG...AGTATGCTGAATGGATGAAATTACAACCGTAGCGGAATAGCTTTCCAGGTTGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| CDS-3UTR CAA 90 bp | CATGGGAAGCTGATGAAAAATACGATTGGAAACCCCTTAAATTGCGTTCCATATGGTTCCTGTCCTTTGTaGTTGTTACCTTCTACTTGG | + |
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Preference number: 5 (lower is better) Translates to: HGKLMKNTIGNPLNCVPYGSCPL*LLPSTW Trigger: CCAAGTAGAAGGTAACAACAACAAAGGACAGGAACC...ATATGGAACGCAATTTAAGGGGTTTCCAATCGTATTTTTCATCAGCTTCCCATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| CDS-3UTR CAA 90 bp | CATGGGAAGCTGATGAAAAATACGATTGGAAACCCCTTAAATTGCGTTCCATATTGCCTTGGCTTCAATTaGTCGATAACAAGAGATACC | + |
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Preference number: 5 (lower is better) Translates to: HGKLMKNTIGNPLNCVPYCLGFN*SITRDT Trigger: GGTATCTCTTGTTATCGACAAATTGAAGCCAAGGCA...ATATGGAACGCAATTTAAGGGGTTTCCAATCGTATTTTTCATCAGCTTCCCATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| CDS GCA 72 bp | GGGCCCGGATCCATTCGTCACCACCCTCCCAGCCGGTaGCATCCAGGAAGACATCGTCCCGGTTCTCAGTCA | + |
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Preference number: 6 (lower is better) Translates to: GPGSIRHHPPSR*HPGRHRPGSQS Trigger: TGACTGAGAACCGGGACGATGTCTTCCTGGATGGCACCGGCTGGGAGGGTGGTGACGAATGGATCCGGGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| CDS GCA 72 bp | AGGACAAGATCTCGAGGAGACAAACCAAGATACACCTaGGATCCTTCTAATGAGGCCCCTCCCAAGGAACTG | + |
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Preference number: 6 (lower is better) Translates to: RTRSRGDKPRYT*DPSNEAPPKEL Trigger: CAGTTCCTTGGGAGGGGCCTCATTAGAAGGATCGCAGGTGTATCTTGGTTTGTCTCCTCGAGATCTTGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031805.11 ENSMUST00000177249.3 |
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| CDS CCA 72 bp | GTCAGCCGTCGTTGGGTTAAGCAGCTTCCTAAGTTCTaGATCGTGGATCTGGATCAGTGCTTCTTCCACTTC | + |
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Preference number: 6 (lower is better) Translates to: VSRRWVKQLPKF*IVDLDQCFFHF Trigger: GAAGTGGAAGAAGCACTGATCCAGATCCACGATCCAGAACTTAGGAAGCTGCTTAACCCAACGACGGCTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| CDS CAA 90 bp | CAGTGCTTCTTCCACTTCCACAATGGCATCACTGAGGTGCTTCTGTaGTCGGAAAAGGATGTTAGTAGCTCCAGCCACAAATCCCCGAAC | + |
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Preference number: 6 (lower is better) Translates to: QCFFHFHNGITEVLL*SEKDVSSSSHKSPN Trigger: GTTCGGGGATTTGTGGCTGGAGCTACTAACATCCTTTTCCGACAACAGAAGCACCTCAGTGATGCCATTGTGGAAGTGGAAGAAGCACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| CDS CCA 72 bp | GGGTTAAGCAGCTTCCTAAGTTCTGGATCGTGGATCTaGATCAGTGCTTCTTCCACTTCCACAATGGCATCA | + |
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Preference number: 6 (lower is better) Translates to: GLSSFLSSGSWI*ISASSTSTMAS Trigger: TGATGCCATTGTGGAAGTGGAAGAAGCACTGATCCAGATCCACGATCCAGAACTTAGGAAGCTGCTTAACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| CDS GCA 72 bp | AGTGCTTCTTCCACTTCCACAATGGCATCACTGAGGTaGTTCTGTTGTCGGAAAAGGATGTTAGTAGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: SASSTSTMASLR*FCCRKRMLVAP Trigger: TGGAGCTACTAACATCCTTTTCCGACAACAGAAGCACCTCAGTGATGCCATTGTGGAAGTGGAAGAAGCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| CDS CCA 72 bp | AGGAAAGGCAAGTACTTCCATTCTTCAGGTAAAGTGTaGCTATCATGTCCATCTCCTGGCAGCCCTTCTTGT | + |
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Preference number: 6 (lower is better) Translates to: RKGKYFHSSGKV*LSCPSPGSPSC Trigger: ACAAGAAGGGCTGCCAGGAGATGGACATGATAGCCACACTTTACCTGAAGAATGGAAGTACTTGCCTTTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204193.2 |
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| CDS CAA 72 bp | TTCCACTTCCACAATGGCATCACTGAGGTGCTTCTGTaGTCGGAAAAGGATGTTAGTAGCTCCAGCCACAAA | + |
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Preference number: 6 (lower is better) Translates to: FHFHNGITEVLL*SEKDVSSSSHK Trigger: TTTGTGGCTGGAGCTACTAACATCCTTTTCCGACAACAGAAGCACCTCAGTGATGCCATTGTGGAAGTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| CDS CCA 72 bp | AGGAAAGGCAAGTACTTCCATTCTTCAGGTAAAGTGTaGCTATCATGTCCATCTCCTGGAATTAGTGGTGGG | + |
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Preference number: 6 (lower is better) Translates to: RKGKYFHSSGKV*LSCPSPGISGG Trigger: CCCACCACTAATTCCAGGAGATGGACATGATAGCCACACTTTACCTGAAGAATGGAAGTACTTGCCTTTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031805.11 ENSMUST00000177249.3 |
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| CDS CCA 72 bp | TATCCCTTTGTAAAGATGGCCAGAGGCATGCCATATTaGTCTTCTTCCAAACCAGAAATGAGCCCTGGTATC | + |
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Preference number: 6 (lower is better) Translates to: YPFVKMARGMPY*SSSKPEMSPGI Trigger: GATACCAGGGCTCATTTCTGGTTTGGAAGAAGACCAATATGGCATGCCTCTGGCCATCTTTACAAAGGGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| CDS CAA 72 bp | TGTCTGACACGGAGTACTGGCCTTGAAAAGGATGGTTaGGATTTATCTCTGAAAGTGCCGGATGCTTATTGC | + |
|
Preference number: 6 (lower is better) Translates to: CLTRSTGLEKDG*DLSLKVPDAYC Trigger: GCAATAAGCATCCGGCACTTTCAGAGATAAATCCAAACCATCCTTTTCAAGGCCAGTACTCCGTGTCAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| CDS TCA 72 bp | AATCTGAGTTTCATGTCTGACACGGAGTACTGGCCTTaGAAAGGATGGTTTGGATTTATCTCTGAAAGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: NLSFMSDTEYWP*KGWFGFISESA Trigger: GGCACTTTCAGAGATAAATCCAAACCATCCTTTTCAAGGCCAGTACTCCGTGTCAGACATGAAACTCAGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| CDS GCA 72 bp | GGTTTGGATTTATCTCTGAAAGTGCCGGATGCTTATTaGTGTTCCATACCCTGTAGTTGTGAGTATTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: GLDLSLKVPDAY*CSIPCSCEYSS Trigger: GGAAGAATACTCACAACTACAGGGTATGGAACAGCAATAAGCATCCGGCACTTTCAGAGATAAATCCAAACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| CDS GCA 72 bp | AACAGTGACATCAGAGAGAAGATGATGCTGCTGCAATaGCATGTAAGGCAAACACAGATATCCCTTTGTAAA | + |
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Preference number: 6 (lower is better) Translates to: NSDIREKMMLLQ*HVRQTQISLCK Trigger: TTTACAAAGGGATATCTGTGTTTGCCTTACATGGCATTGCAGCAGCATCATCTTCTCTCTGATGTCACTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| CDS CAA 90 bp | TCCATACCCTGTAGTTGTGAGTATTCTTCCAGGCGGCAACAAAAGTaGTTCCATAGTCTGATAACATCTTTTCATTATCTAACTGCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: SIPCSCEYSSRRQQK*FHSLITSFHYLTAV Trigger: CACTGCAGTTAGATAATGAAAAGATGTTATCAGACTATGGAACAACTTTTGTTGCCGCCTGGAAGAATACTCACAACTACAGGGTATGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031805.11 |
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| CDS TCA 72 bp | ATTAGCTTAAACAGGATCAAGACCTTGTGTCGAAAATaGAGGACAAGATCTCGAGGAGACAAACCAAGATAC | + |
|
Preference number: 6 (lower is better) Translates to: ISLNRIKTLCRK*RTRSRGDKPRY Trigger: GTATCTTGGTTTGTCTCCTCGAGATCTTGTCCTTCATTTTCGACACAAGGTCTTGATCCTGTTTAAGCTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031805.11 ENSMUST00000177249.3 |
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| CDS CCA 72 bp | CTTCAATTTGTCGATAACAAGAGATACCATATACTGTaGCTCCATTTCCATTTCTGGGTGGCAAGTGAAAAA | + |
|
Preference number: 6 (lower is better) Translates to: LQFVDNKRYHIL*LHFHFWVASEK Trigger: TTTTTCACTTGCCACCCAGAAATGGAAATGGAGCCACAGTATATGGTATCTCTTGTTATCGACAAATTGAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031805.11 ENSMUST00000177249.3 ENSMUST00000204193.2 |
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