Pregenerated sensors for AVIL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025432Ensembl transcript IDs: ENSMUST00000026500.12, ENSMUST00000129173.2
Found 182 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AACATGCTGTGGCACATGGTAGACCTGGGCGTTTGGAGCCTGGCCTaGAGGGAGTGTGTGGTCACTCTAGTGCTTTGGGGATTGCAGGGT | + |
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Preference number: 1 (lower is better) Translates to: NMLWHMVDLGVWSLA*RECVVTLVLWGLQG Trigger: ACCCTGCAATCCCCAAAGCACTAGAGTGACCACACACTCCCTGCAGGCCAGGCTCCAAACGCCCAGGTCTACCATGTGCCACAGCATGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026500.12 |
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| 3UTR CCA 90 bp | TTTGTAAAGTTGAACATGCTGTGGCACATGGTAGACCTGGGCGTTTaGAGCCTGGCCTGCAGGGAGTGTGTGGTCACTCTAGTGCTTTGG | + |
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Preference number: 1 (lower is better) Translates to: FVKLNMLWHMVDLGV*SLACRECVVTLVLW Trigger: CCAAAGCACTAGAGTGACCACACACTCCCTGCAGGCCAGGCTCCAAACGCCCAGGTCTACCATGTGCCACAGCATGTTCAACTTTACAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026500.12 |
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| 3UTR CCA 90 bp | GAACATAGTCACATGGCCTCTTTATTTGTAAAGTTGAACATGCTGTaGCACATGGTAGACCTGGGCGTTTGGAGCCTGGCCTGCAGGGAG | + |
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Preference number: 1 (lower is better) Translates to: EHSHMASLFVKLNML*HMVDLGVWSLACRE Trigger: CTCCCTGCAGGCCAGGCTCCAAACGCCCAGGTCTACCATGTGCCACAGCATGTTCAACTTTACAAATAAAGAGGCCATGTGACTATGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026500.12 |
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| 3UTR-3UTR CCA 90 bp | TTGGAGCCTGGCCTGCAGGGAGTGTGTGGTCACTCTAGTGCTTTGGGGATTGCAGTTTGCTCTCTCCTGTaGCCGGGCAGCAGACACACG | + |
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Preference number: 2 (lower is better) Translates to: LEPGLQGVCGHSSALGIAVCSLL*PGSRHT Trigger: CGTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAAC...TGCAATCCCCAAAGCACTAGAGTGACCACACACTCCCTGCAGGCCAGGCTCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026500.12 |
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| 3UTR-3UTR CAA 90 bp | AAAGTTGAACATGCTGTGGCACATGGTAGACCTGGGCGTTTGGAGCCTGGCCTGGTTGGCACTGCTAGTTaGCTCTCTCCTGTGGCCGGG | + |
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Preference number: 3 (lower is better) Translates to: KVEHAVAHGRPGRLEPGLVGTAS*LSPVAG Trigger: CCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAAC...CAGGCCAGGCTCCAAACGCCCAGGTCTACCATGTGCCACAGCATGTTCAACTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026500.12 |
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| 3UTR CCA 72 bp | TTGAACATGCTGTGGCACATGGTAGACCTGGGCGTTTaGAGCCTGGCCTGCAGGGAGTGTGTGGTCACTCTA | + |
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Preference number: 3 (lower is better) Translates to: LNMLWHMVDLGV*SLACRECVVTL Trigger: TAGAGTGACCACACACTCCCTGCAGGCCAGGCTCCAAACGCCCAGGTCTACCATGTGCCACAGCATGTTCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026500.12 |
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| 3UTR GCA 72 bp | GCAAGCTGTCAGCATCTAATGGACAGCCACAAGGAATaGAAGGATGACTTCGAAAGGCAGTCAGCCATCCTG | + |
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Preference number: 3 (lower is better) Translates to: ASCQHLMDSHKE*KDDFERQSAIL Trigger: CAGGATGGCTGACTGCCTTTCGAAGTCATCCTTGCATTCCTTGTGGCTGTCCATTAGATGCTGACAGCTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
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| 3UTR CCA 72 bp | CACATGGCCTCTTTATTTGTAAAGTTGAACATGCTGTaGCACATGGTAGACCTGGGCGTTTGGAGCCTGGCC | + |
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Preference number: 3 (lower is better) Translates to: HMASLFVKLNML*HMVDLGVWSLA Trigger: GGCCAGGCTCCAAACGCCCAGGTCTACCATGTGCCACAGCATGTTCAACTTTACAAATAAAGAGGCCATGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026500.12 |
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| CDS-3UTR TCA 90 bp | GCTGATGTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACGTGACCAGGTACTCCTaGGCCGTCGAGAGGGCCCCC | + |
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Preference number: 4 (lower is better) Translates to: ADVGTASLLSPVAGQQTHVTRYS*AVERAP Trigger: GGGGGCCCTCTCGACGGCTCAGGAGTACCTGGTCAC...GTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACATCAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
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| CDS-3UTR TCA 90 bp | ATGTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACGCCTCACTGCCCGATAGGCTaGGGCTGCCAGCTCATCCCG | + |
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Preference number: 4 (lower is better) Translates to: MLALLVCSLLWPGSRHTPHCPIG*GCQLIP Trigger: CGGGATGAGCTGGCAGCCTCAGCCTATCGGGCAGTG...AGGCGTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
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| CDS-3UTR TCA 90 bp | AAGTTGAACATGCTGTGGCACATGGTAGACCTGGGCGTTTGGAGCCTGGCCTGCGTGACCAGGTACTCCTaGGCCGTCGAGAGGGCCCCC | + |
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Preference number: 4 (lower is better) Translates to: KLNMLWHMVDLGVWSLACVTRYS*AVERAP Trigger: GGGGGCCCTCTCGACGGCTCAGGAGTACCTGGTCAC...GCAGGCCAGGCTCCAAACGCCCAGGTCTACCATGTGCCACAGCATGTTCAACTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026500.12 |
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| CDS-3UTR GCA 90 bp | GCTGATGTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACATGGCCGCGCAGCTCTaGTCGTCCTGGGAGGAGTCC | + |
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Preference number: 4 (lower is better) Translates to: ADVGTASLLSPVAGQQTHMAAQL*SSWEES Trigger: GGACTCCTCCCAGGACGAGCAGAGCTGCGCGGCCAT...GTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACATCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
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| CDS-3UTR CCA 90 bp | GTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACGCCTTCGGGCTCAGGTCCTCCTaGGTGAAGTCCGTGACCTCC | + |
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Preference number: 4 (lower is better) Translates to: VGTASLLSPVAGQQTHAFGLRSS*VKSVTS Trigger: GGAGGTCACGGACTTCACCCAGGAGGACCTGAGCCC...GAAGGCGTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
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| CDS-3UTR TCA 90 bp | CGTTTGGAGCCTGGCCTGCAGGGAGTGTGTGGTCACTCTAGTGCTTTGGGGATTCACTGCCCGATAGGCTaGGGCTGCCAGCTCATCCCG | + |
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Preference number: 4 (lower is better) Translates to: RLEPGLQGVCGHSSALGIHCPIG*GCQLIP Trigger: CGGGATGAGCTGGCAGCCTCAGCCTATCGGGCAGTG...AATCCCCAAAGCACTAGAGTGACCACACACTCCCTGCAGGCCAGGCTCCAAACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026500.12 |
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| CDS-3UTR GCA 90 bp | AAGTTGAACATGCTGTGGCACATGGTAGACCTGGGCGTTTGGAGCCTGGCCTGCATGGCCGCGCAGCTCTaGTCGTCCTGGGAGGAGTCC | + |
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Preference number: 4 (lower is better) Translates to: KLNMLWHMVDLGVWSLACMAAQL*SSWEES Trigger: GGACTCCTCCCAGGACGAGCAGAGCTGCGCGGCCAT...GCAGGCCAGGCTCCAAACGCCCAGGTCTACCATGTGCCACAGCATGTTCAACTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026500.12 |
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| CDS-3UTR GCA 90 bp | ATGTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACGCCTGGTGCTGCACCGGGCTaGCTCCCAGGTAGTCATCCA | + |
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Preference number: 4 (lower is better) Translates to: MLALLVCSLLWPGSRHTPGAAPG*LPGSHP Trigger: TGGATGACTACCTGGGAGGCAGCCCGGTGCAGCACC...AGGCGTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
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| CDS-3UTR GCA 90 bp | TTGGAGCCTGGCCTGCAGGGAGTGTGTGGTCACTCTAGTGCTTTGGGGATTGCATACTGGACCTCACGGTaGTGCACCGGGCTGCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: LEPGLQGVCGHSSALGIAYWTSR*CTGLPP Trigger: GGGAGGCAGCCCGGTGCAGCACCGTGAGGTCCAGTA...TGCAATCCCCAAAGCACTAGAGTGACCACACACTCCCTGCAGGCCAGGCTCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026500.12 |
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| CDS-3UTR CCA 90 bp | ATGTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACGCCTGACTGTCATCAGCCCTaGGCTGGCCGCCTCCTTGTC | + |
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Preference number: 4 (lower is better) Translates to: MLALLVCSLLWPGSRHTPDCHQP*AGRLLV Trigger: GACAAGGAGGCGGCCAGCCCAGGGCTGATGACAGTC...AGGCGTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
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| CDS-3UTR CCA 90 bp | GTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACGCCTTCCCCCCTTCTTCTCCGTaGCATTGGCCTCCGCTCCTA | + |
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Preference number: 4 (lower is better) Translates to: VGTASLLSPVAGQQTHAFPPSSP*HWPPLL Trigger: TAGGAGCGGAGGCCAATGCCACGGAGAAGAAGGGGG...GAAGGCGTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAAC 61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
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| CDS-3UTR TCA 90 bp | GTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACGCCTTCCGTTGCTCACAGCCCTaGAGGCACTGCTCAGAGACA | + |
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Preference number: 4 (lower is better) Translates to: VGTASLLSPVAGQQTHAFRCSQP*RHCSET Trigger: TGTCTCTGAGCAGTGCCTTCAGGGCTGTGAGCAACG...GAAGGCGTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
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| CDS-3UTR TCA 90 bp | GCTGATGTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACTGCCACCTCTGTGACTaGCAGCTGCCCAGCTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: ADVGTASLLSPVAGQQTHCHLCD*QLPSCV Trigger: GACACAGCTGGGCAGCTGTCAGTCACAGAGGTGGCA...GTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACATCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
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| CDS-3UTR TCA 90 bp | ATGTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACGCCTTGCCACCTCTGTGACTaGCAGCTGCCCAGCTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: MLALLVCSLLWPGSRHTPCHLCD*QLPSCV Trigger: GACACAGCTGGGCAGCTGTCAGTCACAGAGGTGGCA...AGGCGTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
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| CDS-3UTR TCA 90 bp | CCTGGGCGTTTGGAGCCTGGCCTGCAGGGAGTGTGTGGTCACTCTAGTGCTTTGTTGTTGCCACCTCTGTaGCTGACAGCTGCCCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: PGRLEPGLQGVCGHSSALLLPPL*LTAAQL Trigger: CAGCTGGGCAGCTGTCAGTCACAGAGGTGGCAACAA...CAAAGCACTAGAGTGACCACACACTCCCTGCAGGCCAGGCTCCAAACGCCCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026500.12 |
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| CDS-3UTR TCA 90 bp | GTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACGCCTTCGCTCCATCAAACTGCTaGTCCACCTCCACTGCCCGA | + |
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Preference number: 4 (lower is better) Translates to: VGTASLLSPVAGQQTHAFAPSNC*STSTAR Trigger: TCGGGCAGTGGAGGTGGATCAGCAGTTTGATGGAGC...GAAGGCGTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
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| CDS-3UTR CCA 90 bp | GCTGATGTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACCAGCTCTGCTCGTCCTaGGAGGAGTCCTTCCCGATC | + |
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Preference number: 4 (lower is better) Translates to: ADVGTASLLSPVAGQQTHQLCSS*EESFPI Trigger: GATCGGGAAGGACTCCTCCCAGGACGAGCAGAGCTG...GTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACATCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
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| CDS-3UTR CCA 90 bp | GAACATGCTGTGGCACATGGTAGACCTGGGCGTTTGGAGCCTGGCCTGCAGGGAGCTGTGTGGTATAGATaGCCGCGCAGCTCTGCTCGT | + |
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Preference number: 4 (lower is better) Translates to: EHAVAHGRPGRLEPGLQGAVWYR*PRSSAR Trigger: ACGAGCAGAGCTGCGCGGCCATCTATACCACACAGC...TCCCTGCAGGCCAGGCTCCAAACGCCCAGGTCTACCATGTGCCACAGCATGTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026500.12 |
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| CDS-3UTR CCA 90 bp | GTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACGCCTTCGCTGTGTGGTATAGATaGCCGCGCAGCTCTGCTCGT | + |
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Preference number: 4 (lower is better) Translates to: VGTASLLSPVAGQQTHAFAVWYR*PRSSAR Trigger: ACGAGCAGAGCTGCGCGGCCATCTATACCACACAGC...GAAGGCGTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
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| CDS-3UTR CCA 90 bp | GTTTGGAGCCTGGCCTGCAGGGAGTGTGTGGTCACTCTAGTGCTTTGGGGATTGGACTGTCATCAGCCCTaGGCTGGCCGCCTCCTTGTC | + |
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Preference number: 4 (lower is better) Translates to: VWSLACRECVVTLVLWGLDCHQP*AGRLLV Trigger: GACAAGGAGGCGGCCAGCCCAGGGCTGATGACAGTC...CAATCCCCAAAGCACTAGAGTGACCACACACTCCCTGCAGGCCAGGCTCCAAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026500.12 |
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| CDS-3UTR CCA 90 bp | GTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACGCCTTCTGGTTCAGTAGGTCCTaGACCAGGGGCCTTGTTGCC | + |
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Preference number: 4 (lower is better) Translates to: VGTASLLSPVAGQQTHAFWFSRS*TRGLVA Trigger: GGCAACAAGGCCCCTGGTCCAGGACCTACTGAACCA...GAAGGCGTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
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| CDS-3UTR CCA 90 bp | CCTGGGCGTTTGGAGCCTGGCCTGCAGGGAGTGTGTGGTCACTCTAGTGCTTTGTTTTCCCCAAGCCCGTaGTCTGGTCCTTCACCGACC | + |
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Preference number: 4 (lower is better) Translates to: PGRLEPGLQGVCGHSSALFSPSP*SGPSPT Trigger: GGTCGGTGAAGGACCAGACCACGGGCTTGGGGAAAA...CAAAGCACTAGAGTGACCACACACTCCCTGCAGGCCAGGCTCCAAACGCCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026500.12 |
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| CDS-3UTR CCA 90 bp | GTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACGCCTTCGGCCATGAAGTGGCGTaGCTCCTTCCCCATGCTAAC | + |
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Preference number: 4 (lower is better) Translates to: VGTASLLSPVAGQQTHAFGHEVA*LLPHAN Trigger: GTTAGCATGGGGAAGGAGCCACGCCACTTCATGGCC...GAAGGCGTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
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| CDS-3UTR CCA 90 bp | GTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACGCCTTCCCTCGTTTCCCTTCCTaGAAGTCCCGCCCTCGTAGA | + |
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Preference number: 4 (lower is better) Translates to: VGTASLLSPVAGQQTHAFPRFPS*KSRPRR Trigger: TCTACGAGGGCGGGACTTCCAGGAAGGGAAACGAGG...GAAGGCGTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
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| CDS-3UTR CCA 90 bp | GTTTGGAGCCTGGCCTGCAGGGAGTGTGTGGTCACTCTAGTGCTTTGGGGATTGGGGCTCAGGTCCTCCTaGGTGAAGTCCGTGACCTCC | + |
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Preference number: 4 (lower is better) Translates to: VWSLACRECVVTLVLWGLGLRSS*VKSVTS Trigger: GGAGGTCACGGACTTCACCCAGGAGGACCTGAGCCC...CAATCCCCAAAGCACTAGAGTGACCACACACTCCCTGCAGGCCAGGCTCCAAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026500.12 |
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| CDS-3UTR TCA 90 bp | ATGTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACGCCTTTGTTGCCACCTCTGTaGCTGACAGCTGCCCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: MLALLVCSLLWPGSRHTPLLPPL*LTAAQL Trigger: CAGCTGGGCAGCTGTCAGTCACAGAGGTGGCAACAA...AGGCGTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
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| CDS-3UTR GCA 90 bp | AAAGTTGAACATGCTGTGGCACATGGTAGACCTGGGCGTTTGGAGCCTGGCCTGGGTGCTGCACCGGGCTaGCTCCCAGGTAGTCATCCA | + |
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Preference number: 4 (lower is better) Translates to: KVEHAVAHGRPGRLEPGLGAAPG*LPGSHP Trigger: TGGATGACTACCTGGGAGGCAGCCCGGTGCAGCACC...CAGGCCAGGCTCCAAACGCCCAGGTCTACCATGTGCCACAGCATGTTCAACTTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026500.12 |
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| CDS-3UTR GCA 90 bp | ATGTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACGCCTGACGTTCCCCACTGTTaGTCTCCGGGCCATTCCACT | + |
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Preference number: 4 (lower is better) Translates to: MLALLVCSLLWPGSRHTPDVPHC*SPGHST Trigger: AGTGGAATGGCCCGGAGAGCAACAGTGGGGAACGTC...AGGCGTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
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| CDS-3UTR GCA 90 bp | GCTGATGTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACGACGTTCCCCACTGTTaGTCTCCGGGCCATTCCACT | + |
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Preference number: 4 (lower is better) Translates to: ADVGTASLLSPVAGQQTHDVPHC*SPGHST Trigger: AGTGGAATGGCCCGGAGAGCAACAGTGGGGAACGTC...GTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACATCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
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| CDS-3UTR GCA 90 bp | ATGTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACGCCTGAACATGGCCGACTCTaGGCCATCGTTGACGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: MLALLVCSLLWPGSRHTPEHGRL*AIVDGL Trigger: GAGACCGTCAACGATGGCGCAGAGTCGGCCATGTTC...AGGCGTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
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| CDS-3UTR CCA 90 bp | GTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACGCCTTCAGTCATCCAGCTGTGTaGTATAGATGGCCGCGCAGC | + |
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Preference number: 4 (lower is better) Translates to: VGTASLLSPVAGQQTHAFSHPAV*YRWPRS Trigger: GCTGCGCGGCCATCTATACCACACAGCTGGATGACT...GAAGGCGTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
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| CDS-3UTR CCA 90 bp | GTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACGCCTTCTCCGGGCCATTCCACTaGATGATGACCATCCCAAGG | + |
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Preference number: 4 (lower is better) Translates to: VGTASLLSPVAGQQTHAFSGPFH*MMTIPR Trigger: CCTTGGGATGGTCATCATCCAGTGGAATGGCCCGGA...GAAGGCGTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
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| CDS-3UTR CCA 90 bp | GCTGATGTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACTTTTCCCCAAGCCCGTaGTCTGGTCCTTCACCGACC | + |
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Preference number: 4 (lower is better) Translates to: ADVGTASLLSPVAGQQTHFSPSP*SGPSPT Trigger: GGTCGGTGAAGGACCAGACCACGGGCTTGGGGAAAA...GTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACATCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
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| CDS-3UTR CCA 90 bp | ATGTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACGCCTGGCCATGAAGTGGCGTaGCTCCTTCCCCATGCTAAC | + |
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Preference number: 4 (lower is better) Translates to: MLALLVCSLLWPGSRHTPGHEVA*LLPHAN Trigger: GTTAGCATGGGGAAGGAGCCACGCCACTTCATGGCC...AGGCGTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
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| CDS-3UTR CCA 90 bp | CCTGGGCGTTTGGAGCCTGGCCTGCAGGGAGTGTGTGGTCACTCTAGTGCTTTGTCAAAGAGCCGGACCTaGACGTCCAGGGTTTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: PGRLEPGLQGVCGHSSALSKSRT*TSRVSC Trigger: GCAAGAAACCCTGGACGTCCAGGTCCGGCTCTTTGA...CAAAGCACTAGAGTGACCACACACTCCCTGCAGGCCAGGCTCCAAACGCCCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026500.12 |
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| CDS-3UTR CCA 90 bp | CGTTTGGAGCCTGGCCTGCAGGGAGTGTGTGGTCACTCTAGTGCTTTGGGGATTCCCCCTTCTTCTCCGTaGCATTGGCCTCCGCTCCTA | + |
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Preference number: 4 (lower is better) Translates to: RLEPGLQGVCGHSSALGIPPSSP*HWPPLL Trigger: TAGGAGCGGAGGCCAATGCCACGGAGAAGAAGGGGG...AATCCCCAAAGCACTAGAGTGACCACACACTCCCTGCAGGCCAGGCTCCAAACG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026500.12 |
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| CDS-3UTR TCA 90 bp | GCTGATGTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACGGCAGCTCCTGGTTCTaGCCTTTCAGCAGAACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ADVGTASLLSPVAGQQTHGSSWF*PFSRTS Trigger: GGAAGTTCTGCTGAAAGGTCAGAACCAGGAGCTGCC...GTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACATCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS-3UTR GCA 90 bp | GCTGATGTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACTCTGTGACTGACAGCTaGCCAGCTGTGTCGGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: ADVGTASLLSPVAGQQTHSVTDS*PAVSET Trigger: TGTCTCCGACACAGCTGGGCAGCTGTCAGTCACAGA...GTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACATCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS-3UTR GCA 90 bp | ATGTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACGCCTCCACAGGTAGTGCTCTaGCTGAGTCCGCAGCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: MLALLVCSLLWPGSRHTPPQVVL*LSPQQK Trigger: TTTCTGCTGCGGACTCAGGCAGAGCACTACCTGTGG...AGGCGTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS-3UTR GCA 90 bp | GTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACGCCTTCCCACAGTGTCCGCATTaGCATCACAGAGAAGGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: VGTASLLSPVAGQQTHAFPQCPH*HHREGR Trigger: TCGACCTTCTCTGTGATGGCAATGCGGACACTGTGG...GAAGGCGTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS-3UTR CCA 90 bp | GCTGATGTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACAGTCATCCAGCTGTGTaGTATAGATGGCCGCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ADVGTASLLSPVAGQQTHSHPAV*YRWPRS Trigger: GCTGCGCGGCCATCTATACCACACAGCTGGATGACT...GTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACATCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS-3UTR CCA 90 bp | ATGTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACGCCTCGACCAAGGGTATCCTaGAGGACTGTCATCAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: MLALLVCSLLWPGSRHTPRPRVS*RTVISP Trigger: AGGGCTGATGACAGTCCTCCAGGATACCCTTGGTCG...AGGCGTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS-3UTR CCA 90 bp | ATGTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACGCCTAAGATGGCCATGAAGTaGCGTGGCTCCTTCCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: MLALLVCSLLWPGSRHTPKMAMK*RGSFPM Trigger: CATGGGGAAGGAGCCACGCCACTTCATGGCCATCTT...AGGCGTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS-3UTR CCA 90 bp | GCTGATGTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACTCGTTCCCGTGGATCTaGAAGAGCCTTACTGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ADVGTASLLSPVAGQQTHSFPWI*KSLTGG Trigger: CCCTCCAGTAAGGCTCTTCCAGATCCACGGGAACGA...GTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACATCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS-3UTR CCA 90 bp | GCTGATGTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACTCAAAGAGCCGGACCTaGACGTCCAGGGTTTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: ADVGTASLLSPVAGQQTHSKSRT*TSRVSC Trigger: GCAAGAAACCCTGGACGTCCAGGTCCGGCTCTTTGA...GTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACATCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS-3UTR CCA 90 bp | GAACATGCTGTGGCACATGGTAGACCTGGGCGTTTGGAGCCTGGCCTGCAGGGAATCCACAAGAACACCTaGTCCCAGGTGTCCAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: EHAVAHGRPGRLEPGLQGIHKNT*SQVSRS Trigger: GCTTCTGGACACCTGGGACCAGGTGTTCTTGTGGAT...TCCCTGCAGGCCAGGCTCCAAACGCCCAGGTCTACCATGTGCCACAGCATGTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026500.12 |
||
| CDS-3UTR CCA 90 bp | GCTGATGTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACTCTTCTCCGTGGCATTaGCCTCCGCTCCTATCCACA | + |
|
Preference number: 4 (lower is better) Translates to: ADVGTASLLSPVAGQQTHSSPWH*PPLLST Trigger: TGTGGATAGGAGCGGAGGCCAATGCCACGGAGAAGA...GTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACATCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS-3UTR TCA 90 bp | GCTGATGTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACTCTGGAACAACTGTTTaGACATGGCCGACTCTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: ADVGTASLLSPVAGQQTHSGTTV*TWPTLR Trigger: GCGCAGAGTCGGCCATGTTCAAACAGTTGTTCCAGA...GTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACATCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS-3UTR GCA 90 bp | AAGTTGAACATGCTGTGGCACATGGTAGACCTGGGCGTTTGGAGCCTGGCCTGCTCTGTGACTGACAGCTaGCCAGCTGTGTCGGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: KLNMLWHMVDLGVWSLACSVTDS*PAVSET Trigger: TGTCTCCGACACAGCTGGGCAGCTGTCAGTCACAGA...GCAGGCCAGGCTCCAAACGCCCAGGTCTACCATGTGCCACAGCATGTTCAACTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026500.12 |
||
| CDS-3UTR GCA 90 bp | ATGTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACGCCTTCTCCACGTTGGTGCTaGTGGGGTATCCCTTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: MLALLVCSLLWPGSRHTPSPRWC*WGIPSS Trigger: AGATGAAGGGATACCCCAGCAGCACCAACGTGGAGA...AGGCGTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS-3UTR CCA 90 bp | GTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACGCCTTCCAAAAGTGGATGTTCTaGGAGAGAAGGCTGCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: VGTASLLSPVAGQQTHAFQKWMF*ERRLPT Trigger: AGTGGGCAGCCTTCTCTCCCAGAACATCCACTTTTG...GAAGGCGTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS-3UTR CCA 90 bp | TGTAAAGTTGAACATGCTGTGGCACATGGTAGACCTGGGCGTTTGGAGCCTGGCCAGCTCTGCTCGTCCTaGGAGGAGTCCTTCCCGATC | + |
|
Preference number: 4 (lower is better) Translates to: CKVEHAVAHGRPGRLEPGQLCSS*EESFPI Trigger: GATCGGGAAGGACTCCTCCCAGGACGAGCAGAGCTG...GCCAGGCTCCAAACGCCCAGGTCTACCATGTGCCACAGCATGTTCAACTTTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026500.12 |
||
| CDS-3UTR CCA 90 bp | GTTTGGAGCCTGGCCTGCAGGGAGTGTGTGGTCACTCTAGTGCTTTGGGGATTGCGACCAAGGGTATCCTaGAGGACTGTCATCAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: VWSLACRECVVTLVLWGLRPRVS*RTVISP Trigger: AGGGCTGATGACAGTCCTCCAGGATACCCTTGGTCG...CAATCCCCAAAGCACTAGAGTGACCACACACTCCCTGCAGGCCAGGCTCCAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026500.12 |
||
| CDS-3UTR CCA 90 bp | AAAGTTGAACATGCTGTGGCACATGGTAGACCTGGGCGTTTGGAGCCTGGCCTGTGGTTCAGTAGGTCCTaGACCAGGGGCCTTGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: KVEHAVAHGRPGRLEPGLWFSRS*TRGLVA Trigger: GGCAACAAGGCCCCTGGTCCAGGACCTACTGAACCA...CAGGCCAGGCTCCAAACGCCCAGGTCTACCATGTGCCACAGCATGTTCAACTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026500.12 |
||
| CDS-3UTR CCA 90 bp | CGTTTGGAGCCTGGCCTGCAGGGAGTGTGTGGTCACTCTAGTGCTTTGGGGATTTCGTTCCCGTGGATCTaGAAGAGCCTTACTGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RLEPGLQGVCGHSSALGISFPWI*KSLTGG Trigger: CCCTCCAGTAAGGCTCTTCCAGATCCACGGGAACGA...AATCCCCAAAGCACTAGAGTGACCACACACTCCCTGCAGGCCAGGCTCCAAACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026500.12 |
||
| CDS-3UTR CCA 90 bp | GAACATGCTGTGGCACATGGTAGACCTGGGCGTTTGGAGCCTGGCCTGCAGGGACCACTGCTTTGGTGTTaGATTTGTCGTTCCCGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: EHAVAHGRPGRLEPGLQGPLLWC*ICRSRG Trigger: TCCACGGGAACGACAAATCCAACACCAAAGCAGTGG...TCCCTGCAGGCCAGGCTCCAAACGCCCAGGTCTACCATGTGCCACAGCATGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026500.12 |
||
| CDS-3UTR CCA 90 bp | GCTGATGTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACATCCACAAGAACACCTaGTCCCAGGTGTCCAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: ADVGTASLLSPVAGQQTHIHKNT*SQVSRS Trigger: GCTTCTGGACACCTGGGACCAGGTGTTCTTGTGGAT...GTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACATCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| 3UTR CAA 72 bp | GTAGGTGAACTCTTTGCTGATGTTGGCACTGCTAGTTaGCTCTCTCCTGTGGCCGGGCAGCAGACACACGCC | + |
|
Preference number: 4 (lower is better) Translates to: VGELFADVGTAS*LSPVAGQQTHA Trigger: GGCGTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACATCAGCAAAGAGTTCACCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| 3UTR CAA 72 bp | CCTGGCCTGCAGGGAGTGTGTGGTCACTCTAGTGCTTaGGGGATTGCAGGGTGTAGTTGGAAGCAGATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PGLQGVCGHSSA*GIAGCSWKQMW Trigger: CCACATCTGCTTCCAACTACACCCTGCAATCCCCAAAGCACTAGAGTGACCACACACTCCCTGCAGGCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026500.12 |
||
| CDS-3UTR GCA 90 bp | ATGTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACGCCTGTCCCGAATGTCCTTTaGCAGAAGCATAGCCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: MLALLVCSLLWPGSRHTPVPNVL*QKHSLE Trigger: CTCAAGGCTATGCTTCTGGCAAAGGACATTCGGGAC...AGGCGTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS-3UTR GCA 90 bp | CCTGGGCGTTTGGAGCCTGGCCTGCAGGGAGTGTGTGGTCACTCTAGTGCTTTGACACGTAGATCTTGGTaGCACTTTGGTCCAGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: PGRLEPGLQGVCGHSSALTRRSW*HFGPGC Trigger: ACATCCTGGACCAAAGTGGCACCAAGATCTACGTGT...CAAAGCACTAGAGTGACCACACACTCCCTGCAGGCCAGGCTCCAAACGCCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026500.12 |
||
| CDS-3UTR GCA 90 bp | GCTGATGTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACCCTTGGTGGCTCCTTTaGCTTTCCACACGTAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: ADVGTASLLSPVAGQQTHPWWLL*LSTRRS Trigger: AGATCTACGTGTGGAAAGGCAAAGGAGCCACCAAGG...GTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACATCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS-3UTR GCA 90 bp | TGCAGGGAGTGTGTGGTCACTCTAGTGCTTTGGGGATTGCAGGGTGTAGTTGGAGAACATGGCCGACTCTaGGCCATCGTTGACGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CRECVVTLVLWGLQGVVGEHGRL*AIVDGL Trigger: GAGACCGTCAACGATGGCGCAGAGTCGGCCATGTTC...TCCAACTACACCCTGCAATCCCCAAAGCACTAGAGTGACCACACACTCCCTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026500.12 |
||
| CDS-3UTR GCA 90 bp | CGTTTGGAGCCTGGCCTGCAGGGAGTGTGTGGTCACTCTAGTGCTTTGGGGATTCCACAGTGTCCGCATTaGCATCACAGAGAAGGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: RLEPGLQGVCGHSSALGIPQCPH*HHREGR Trigger: TCGACCTTCTCTGTGATGGCAATGCGGACACTGTGG...AATCCCCAAAGCACTAGAGTGACCACACACTCCCTGCAGGCCAGGCTCCAAACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026500.12 |
||
| CDS-3UTR CCA 90 bp | GCTGATGTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACCAAAAGTGGATGTTCTaGGAGAGAAGGCTGCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: ADVGTASLLSPVAGQQTHQKWMF*ERRLPT Trigger: AGTGGGCAGCCTTCTCTCCCAGAACATCCACTTTTG...GTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACATCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS-3UTR CCA 90 bp | AAAGTTGAACATGCTGTGGCACATGGTAGACCTGGGCGTTTGGAGCCTGGCCTGTCCGGGCCATTCCACTaGATGATGACCATCCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KVEHAVAHGRPGRLEPGLSGPFH*MMTIPR Trigger: CCTTGGGATGGTCATCATCCAGTGGAATGGCCCGGA...CAGGCCAGGCTCCAAACGCCCAGGTCTACCATGTGCCACAGCATGTTCAACTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026500.12 |
||
| CDS-3UTR CCA 90 bp | GCTGATGTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACCAGCCACTTCTGGCTTaGTGTGTAGCAGAGACACAT | + |
|
Preference number: 4 (lower is better) Translates to: ADVGTASLLSPVAGQQTHQPLLA*CVAETH Trigger: ATGTGTCTCTGCTACACACCAAGCCAGAAGTGGCTG...GTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACATCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS-3UTR CCA 90 bp | ATGTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACGCCTCAGCCACTTCTGGCTTaGTGTGTAGCAGAGACACAT | + |
|
Preference number: 4 (lower is better) Translates to: MLALLVCSLLWPGSRHTPQPLLA*CVAETH Trigger: ATGTGTCTCTGCTACACACCAAGCCAGAAGTGGCTG...AGGCGTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS-3UTR CCA 90 bp | TGTAAAGTTGAACATGCTGTGGCACATGGTAGACCTGGGCGTTTGGAGCCTGGCCCTCGTTTCCCTTCCTaGAAGTCCCGCCCTCGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: CKVEHAVAHGRPGRLEPGPRFPS*KSRPRR Trigger: TCTACGAGGGCGGGACTTCCAGGAAGGGAAACGAGG...GCCAGGCTCCAAACGCCCAGGTCTACCATGTGCCACAGCATGTTCAACTTTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026500.12 |
||
| CDS-3UTR CCA 90 bp | ATGTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACGCCTCCACTGCTTTGGTGTTaGATTTGTCGTTCCCGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: MLALLVCSLLWPGSRHTPPLLWC*ICRSRG Trigger: TCCACGGGAACGACAAATCCAACACCAAAGCAGTGG...AGGCGTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS-3UTR CCA 90 bp | GAACATGCTGTGGCACATGGTAGACCTGGGCGTTTGGAGCCTGGCCTGCAGGGAAGACCTCCACTGCTTTaGTGTTGGATTTGTCGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: EHAVAHGRPGRLEPGLQGRPPLL*CWICRS Trigger: GGAACGACAAATCCAACACCAAAGCAGTGGAGGTCT...TCCCTGCAGGCCAGGCTCCAAACGCCCAGGTCTACCATGTGCCACAGCATGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026500.12 |
||
| CDS-3UTR CCA 90 bp | ATGTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACGCCTAGCGGCCAGTCTTATTaGAACACTCAAAGAGCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: MLALLVCSLLWPGSRHTPSGQSY*NTQRAG Trigger: TCCGGCTCTTTGAGTGTTCCAATAAGACTGGCCGCT...AGGCGTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS-3UTR CCA 90 bp | GCTGATGTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACAGCGGCCAGTCTTATTaGAACACTCAAAGAGCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: ADVGTASLLSPVAGQQTHSGQSY*NTQRAG Trigger: TCCGGCTCTTTGAGTGTTCCAATAAGACTGGCCGCT...GTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACATCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS-3UTR CCA 90 bp | GCTGATGTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACCACCGGGTAGTACTTTaGCTCACCGTCACTAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: ADVGTASLLSPVAGQQTHHRVVL*LTVTRI Trigger: AATCCTAGTGACGGTGAGCCAAAGTACTACCCGGTG...GTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACATCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS-3UTR TCA 90 bp | TGTAAAGTTGAACATGCTGTGGCACATGGTAGACCTGGGCGTTTGGAGCCTGGCGGCAGCTCCTGGTTCTaGCCTTTCAGCAGAACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: CKVEHAVAHGRPGRLEPGGSSWF*PFSRTS Trigger: GGAAGTTCTGCTGAAAGGTCAGAACCAGGAGCTGCC...GCCAGGCTCCAAACGCCCAGGTCTACCATGTGCCACAGCATGTTCAACTTTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026500.12 |
||
| CDS-3UTR GCA 90 bp | CGTTTGGAGCCTGGCCTGCAGGGAGTGTGTGGTCACTCTAGTGCTTTGGGGATTGTCCCGAATGTCCTTTaGCAGAAGCATAGCCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RLEPGLQGVCGHSSALGIVPNVL*QKHSLE Trigger: CTCAAGGCTATGCTTCTGGCAAAGGACATTCGGGAC...AATCCCCAAAGCACTAGAGTGACCACACACTCCCTGCAGGCCAGGCTCCAAACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026500.12 |
||
| CDS-3UTR GCA 90 bp | GCTGATGTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACACACGTAGATCTTGGTaGCACTTTGGTCCAGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: ADVGTASLLSPVAGQQTHTRRSW*HFGPGC Trigger: ACATCCTGGACCAAAGTGGCACCAAGATCTACGTGT...GTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACATCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS-3UTR GCA 90 bp | TGCAGGGAGTGTGTGGTCACTCTAGTGCTTTGGGGATTGCAGGGTGTAGTTGGACCACAGGTAGTGCTCTaGCTGAGTCCGCAGCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: CRECVVTLVLWGLQGVVGPQVVL*LSPQQK Trigger: TTTCTGCTGCGGACTCAGGCAGAGCACTACCTGTGG...TCCAACTACACCCTGCAATCCCCAAAGCACTAGAGTGACCACACACTCCCTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026500.12 |
||
| CDS-3UTR CCA 90 bp | GCTGATGTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACTTCCCGATCCAAAAGTaGATGTTCTGGGAGAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ADVGTASLLSPVAGQQTHFPIQK*MFWERR Trigger: CCTTCTCTCCCAGAACATCCACTTTTGGATCGGGAA...GTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACATCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS-3UTR CCA 90 bp | GCTGATGTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACTCCACCTCCGTGGCTTaGATGTTTCTTTTCCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ADVGTASLLSPVAGQQTHSTSVA*MFLFPF Trigger: AAAGGGGAAAAGAAACATCCAAGCCACGGAGGTGGA...GTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACATCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS-3UTR CCA 90 bp | GTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACGCCTTCTCATTTCCACCTCCGTaGCTTGGATGTTTCTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VGTASLLSPVAGQQTHAFSFPPP*LGCFFS Trigger: GGAAAAGAAACATCCAAGCCACGGAGGTGGAAATGA...GAAGGCGTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS-3UTR CCA 90 bp | TGCAGGGAGTGTGTGGTCACTCTAGTGCTTTGGGGATTGCAGGGTGTAGTTGGAAAGATGGCCATGAAGTaGCGTGGCTCCTTCCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: CRECVVTLVLWGLQGVVGKMAMK*RGSFPM Trigger: CATGGGGAAGGAGCCACGCCACTTCATGGCCATCTT...TCCAACTACACCCTGCAATCCCCAAAGCACTAGAGTGACCACACACTCCCTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026500.12 |
||
| CDS-3UTR CCA 90 bp | ATGTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACGCCTAGACCTCCACTGCTTTaGTGTTGGATTTGTCGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: MLALLVCSLLWPGSRHTPRPPLL*CWICRS Trigger: GGAACGACAAATCCAACACCAAAGCAGTGGAGGTCT...AGGCGTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS-3UTR CCA 90 bp | TGTAAAGTTGAACATGCTGTGGCACATGGTAGACCTGGGCGTTTGGAGCCTGGCTCTTCTCCGTGGCATTaGCCTCCGCTCCTATCCACA | + |
|
Preference number: 4 (lower is better) Translates to: CKVEHAVAHGRPGRLEPGSSPWH*PPLLST Trigger: TGTGGATAGGAGCGGAGGCCAATGCCACGGAGAAGA...GCCAGGCTCCAAACGCCCAGGTCTACCATGTGCCACAGCATGTTCAACTTTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026500.12 |
||
| CDS-3UTR GCA 90 bp | GCTGATGTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACGATCTCATCAGAAACTaGAGGCTTTATCATGGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: ADVGTASLLSPVAGQQTHDLIRN*RLYHGA Trigger: CGCTCCATGATAAAGCCTGCAGTTTCTGATGAGATC...GTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACATCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS-3UTR GCA 90 bp | ATGTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACGCCTACGTCCAGGGTTTCTTaGTGCAGCCTTTTGTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: MLALLVCSLLWPGSRHTPTSRVS*CSLLSL Trigger: TAATGACAAAAGGCTGCAGCAAGAAACCCTGGACGT...AGGCGTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
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| CDS-3UTR CCA 90 bp | ATGTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACGCCTTCATTTCCACCTCCGTaGCTTGGATGTTTCTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: MLALLVCSLLWPGSRHTPSFPPP*LGCFFS Trigger: GGAAAAGAAACATCCAAGCCACGGAGGTGGAAATGA...AGGCGTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS-3UTR GCA 90 bp | TGCAGGGAGTGTGTGGTCACTCTAGTGCTTTGGGGATTGCAGGGTGTAGTTGGACCTTGGTGGCTCCTTTaGCTTTCCACACGTAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: CRECVVTLVLWGLQGVVGPWWLL*LSTRRS Trigger: AGATCTACGTGTGGAAAGGCAAAGGAGCCACCAAGG...TCCAACTACACCCTGCAATCCCCAAAGCACTAGAGTGACCACACACTCCCTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026500.12 |
||
| CDS-3UTR GCA 90 bp | GCTGATGTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACAGCTCGTTCTTTAGCTaGTCATATGATTTTCCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: ADVGTASLLSPVAGQQTHSSFFS*SYDFPS Trigger: CGAAGGAAAATCATATGAGCAGCTAAAGAACGAGCT...GTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACATCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS-3UTR CCA 90 bp | ATGTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACGCCTTTCACCGACCATTTCTaGAACAACTGTTTGAACATG | + |
|
Preference number: 4 (lower is better) Translates to: MLALLVCSLLWPGSRHTPFTDHF*NNCLNM Trigger: CATGTTCAAACAGTTGTTCCAGAAATGGTCGGTGAA...AGGCGTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS-3UTR GCA 90 bp | TGCAGGGAGTGTGTGGTCACTCTAGTGCTTTGGGGATTGCAGGGTGTAGTTGGAGATCTCATCAGAAACTaGAGGCTTTATCATGGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: CRECVVTLVLWGLQGVVGDLIRN*RLYHGA Trigger: CGCTCCATGATAAAGCCTGCAGTTTCTGATGAGATC...TCCAACTACACCCTGCAATCCCCAAAGCACTAGAGTGACCACACACTCCCTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026500.12 |
||
| CDS-3UTR GCA 90 bp | AAGTTGAACATGCTGTGGCACATGGTAGACCTGGGCGTTTGGAGCCTGGCCTGCAGCTCGTTCTTTAGCTaGTCATATGATTTTCCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: KLNMLWHMVDLGVWSLACSSFFS*SYDFPS Trigger: CGAAGGAAAATCATATGAGCAGCTAAAGAACGAGCT...GCAGGCCAGGCTCCAAACGCCCAGGTCTACCATGTGCCACAGCATGTTCAACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026500.12 |
||
| CDS TCA 90 bp | GGTGTGTCGGGGTCTCGGCCACTAGGATGTGTGACCAGGTACTCCTaGGCCGTCGAGAGGGCCCCCTTCTTCTCCGTGGCATTGGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GVSGSRPLGCVTRYS*AVERAPFFSVALAS Trigger: GGAGGCCAATGCCACGGAGAAGAAGGGGGCCCTCTCGACGGCTCAGGAGTACCTGGTCACACATCCTAGTGGCCGAGACCCCGACACACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
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| CDS-3UTR CAA 90 bp | GTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACGCCTTCGGGCTGGCCGCCTCCTaGTCTCCCTCAATCACCCCA | + |
|
Preference number: 5 (lower is better) Translates to: VGTASLLSPVAGQQTHAFGLAAS*SPSITP Trigger: TGGGGTGATTGAGGGAGACAAGGAGGCGGCCAGCCC...GAAGGCGTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS CCA 90 bp | GGTACTCCTGAGCCGTCGAGAGGGCCCCCTTCTTCTCCGTGGCATTaGCCTCCGCTCCTATCCACAAGAACACCTGGTCCCAGGTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GTPEPSRGPPSSPWH*PPLLSTRTPGPRCP Trigger: TGGACACCTGGGACCAGGTGTTCTTGTGGATAGGAGCGGAGGCCAATGCCACGGAGAAGAAGGGGGCCCTCTCGACGGCTCAGGAGTACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
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| CDS-3UTR CAA 90 bp | GCTGATGTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACGGGCTGGCCGCCTCCTaGTCTCCCTCAATCACCCCA | + |
|
Preference number: 5 (lower is better) Translates to: ADVGTASLLSPVAGQQTHGLAAS*SPSITP Trigger: TGGGGTGATTGAGGGAGACAAGGAGGCGGCCAGCCC...GTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACATCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS GCA 90 bp | CCGCTCGTCCCCACTAGACCCCTTGCCGTACCACAGGTAGTGCTCTaGCTGAGTCCGCAGCAGAAAGACGTCGTTGGAGTTGAGCGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: PLVPTRPLAVPQVVL*LSPQQKDVVGVERG Trigger: TCCTCGCTCAACTCCAACGACGTCTTTCTGCTGCGGACTCAGGCAGAGCACTACCTGTGGTACGGCAAGGGGTCTAGTGGGGACGAGCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
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| CDS-3UTR CAA 90 bp | GTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACGCCTTCATGATCCGGGGGTCGTaGCTCACAGCCCTGAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: VGTASLLSPVAGQQTHAFMIRGS*LTALKA Trigger: TGCCTTCAGGGCTGTGAGCAACGACCCCCGGATCAT...GAAGGCGTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS-3UTR CAA 90 bp | GTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACGCCTTCTTGACGGTCTCCACGTaGGTGCTGCTGGGGTATCCC | + |
|
Preference number: 5 (lower is better) Translates to: VGTASLLSPVAGQQTHAFLTVST*VLLGYP Trigger: GGGATACCCCAGCAGCACCAACGTGGAGACCGTCAA...GAAGGCGTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
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| CDS-3UTR CAA 90 bp | GTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACGCCTTCGACTCTGCGCCATCGTaGACGGTCTCCACGTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: VGTASLLSPVAGQQTHAFDSAPS*TVSTLV Trigger: CACCAACGTGGAGACCGTCAACGATGGCGCAGAGTC...GAAGGCGTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS-3UTR CAA 90 bp | ATGTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACGCCTAGACGTTCCCCACTGTaGCTCTCCGGGCCATTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: MLALLVCSLLWPGSRHTPRRSPL*LSGPFH Trigger: GTGGAATGGCCCGGAGAGCAACAGTGGGGAACGTCT...AGGCGTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
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| CDS-3UTR CAA 90 bp | ATGTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACGCCTTTGACGGTCTCCACGTaGGTGCTGCTGGGGTATCCC | + |
|
Preference number: 5 (lower is better) Translates to: MLALLVCSLLWPGSRHTPLTVST*VLLGYP Trigger: GGGATACCCCAGCAGCACCAACGTGGAGACCGTCAA...AGGCGTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
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| CDS-3UTR CAA 90 bp | GTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACGCCTTCACCTCAACCTGGCCTTaGCCGTCGTCCACCATTCTC | + |
|
Preference number: 5 (lower is better) Translates to: VGTASLLSPVAGQQTHAFTSTWP*PSSTIL Trigger: GAGAATGGTGGACGACGGCAAAGGCCAGGTTGAGGT...GAAGGCGTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
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| CDS-3UTR CAA 90 bp | GAACATGCTGTGGCACATGGTAGACCTGGGCGTTTGGAGCCTGGCCTGCAGGGAGCCACAGTGTCCGCATaGCCATCACAGAGAAGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: EHAVAHGRPGRLEPGLQGATVSA*PSQRRS Trigger: CGACCTTCTCTGTGATGGCAATGCGGACACTGTGGC...TCCCTGCAGGCCAGGCTCCAAACGCCCAGGTCTACCATGTGCCACAGCATGTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026500.12 |
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| CDS-3UTR CAA 90 bp | GTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACGCCTTCGCCACAGTGTCCGCATaGCCATCACAGAGAAGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: VGTASLLSPVAGQQTHAFATVSA*PSQRRS Trigger: CGACCTTCTCTGTGATGGCAATGCGGACACTGTGGC...GAAGGCGTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
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| CDS TCA 90 bp | GGTAGTGCTCTGCCTGAGTCCGCAGCAGAAAGACGTCGTTGGAGTTaGGCGAGGAAGCAGAGGCCGAGACCTCCACTGCTTTGGTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: GSALPESAAERRRWS*ARKQRPRPPLLWCW Trigger: CCAACACCAAAGCAGTGGAGGTCTCGGCCTCTGCTTCCTCGCTCAACTCCAACGACGTCTTTCTGCTGCGGACTCAGGCAGAGCACTACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
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| CDS CCA 90 bp | GAGGCCGAGACCTCCACTGCTTTGGTGTTGGATTTGTCGTTCCCGTaGATCTGGAAGAGCCTTACTGGAGGGTCCGGCTCCTCGTTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: EAETSTALVLDLSFP*IWKSLTGGSGSSFP Trigger: GGGAAACGAGGAGCCGGACCCTCCAGTAAGGCTCTTCCAGATCCACGGGAACGACAAATCCAACACCAAAGCAGTGGAGGTCTCGGCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
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| CDS-3UTR CAA 90 bp | GTTTGGAGCCTGGCCTGCAGGGAGTGTGTGGTCACTCTAGTGCTTTGGGGATTGAGACGTTCCCCACTGTaGCTCTCCGGGCCATTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: VWSLACRECVVTLVLWGLRRSPL*LSGPFH Trigger: GTGGAATGGCCCGGAGAGCAACAGTGGGGAACGTCT...CAATCCCCAAAGCACTAGAGTGACCACACACTCCCTGCAGGCCAGGCTCCAAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026500.12 |
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| CDS-3UTR CAA 90 bp | GTTTGGAGCCTGGCCTGCAGGGAGTGTGTGGTCACTCTAGTGCTTTGGGGATTGGACTCTGCGCCATCGTaGACGGTCTCCACGTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: VWSLACRECVVTLVLWGLDSAPS*TVSTLV Trigger: CACCAACGTGGAGACCGTCAACGATGGCGCAGAGTC...CAATCCCCAAAGCACTAGAGTGACCACACACTCCCTGCAGGCCAGGCTCCAAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026500.12 |
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| CDS-3UTR CAA 90 bp | CCTGGGCGTTTGGAGCCTGGCCTGCAGGGAGTGTGTGGTCACTCTAGTGCTTTGGCAGCCACTTCTGGCTaGGTGTGTAGCAGAGACACA | + |
|
Preference number: 5 (lower is better) Translates to: PGRLEPGLQGVCGHSSALAATSG*VCSRDT Trigger: TGTGTCTCTGCTACACACCAAGCCAGAAGTGGCTGC...CAAAGCACTAGAGTGACCACACACTCCCTGCAGGCCAGGCTCCAAACGCCCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026500.12 |
||
| CDS-3UTR CAA 90 bp | GTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACGCCTTCGCAGCCACTTCTGGCTaGGTGTGTAGCAGAGACACA | + |
|
Preference number: 5 (lower is better) Translates to: VGTASLLSPVAGQQTHAFAATSG*VCSRDT Trigger: TGTGTCTCTGCTACACACCAAGCCAGAAGTGGCTGC...GAAGGCGTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
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| CDS-3UTR CAA 90 bp | ATGTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACGCCTACCTCAACCTGGCCTTaGCCGTCGTCCACCATTCTC | + |
|
Preference number: 5 (lower is better) Translates to: MLALLVCSLLWPGSRHTPTSTWP*PSSTIL Trigger: GAGAATGGTGGACGACGGCAAAGGCCAGGTTGAGGT...AGGCGTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS-3UTR CAA 90 bp | GCTGATGTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACTTCTTCTCCGTGGCATaGGCCTCCGCTCCTATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: ADVGTASLLSPVAGQQTHFFSVA*ASAPIH Trigger: GTGGATAGGAGCGGAGGCCAATGCCACGGAGAAGAA...GTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACATCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS CCA 90 bp | TTTGGTGTTGGATTTGTCGTTCCCGTGGATCTGGAAGAGCCTTACTaGAGGGTCCGGCTCCTCGTTTCCCTTCCTGGAAGTCCCGCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: FGVGFVVPVDLEEPY*RVRLLVSLPGSPAL Trigger: GAGGGCGGGACTTCCAGGAAGGGAAACGAGGAGCCGGACCCTCCAGTAAGGCTCTTCCAGATCCACGGGAACGACAAATCCAACACCAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS CCA 90 bp | TCCCAGGTGTCCAGAAGCATCACATCACCTGGGCTCAGGTCCTCCTaGGTGAAGTCCGTGACCTCCGTAACAAGGAAGCGGCCAGTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: SQVSRSITSPGLRSS*VKSVTSVTRKRPVL Trigger: TAAGACTGGCCGCTTCCTTGTTACGGAGGTCACGGACTTCACCCAGGAGGACCTGAGCCCAGGTGATGTGATGCTTCTGGACACCTGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS-3UTR CAA 90 bp | GCTGATGTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACGCCAGAAGCATAGCCTaGAGACGTTCCCCACTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: ADVGTASLLSPVAGQQTHARSIA*RRSPLL Trigger: CAACAGTGGGGAACGTCTCAAGGCTATGCTTCTGGC...GTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACATCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS-3UTR CAA 90 bp | ATGTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACGCCTGCCAGAAGCATAGCCTaGAGACGTTCCCCACTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: MLALLVCSLLWPGSRHTPARSIA*RRSPLL Trigger: CAACAGTGGGGAACGTCTCAAGGCTATGCTTCTGGC...AGGCGTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS-3UTR CAA 90 bp | GTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACGCCTTCGCCTGTTTCTCAACCTaGGTGGCTCCTTTGCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VGTASLLSPVAGQQTHAFACFST*VAPLPF Trigger: GAAAGGCAAAGGAGCCACCAAGGTTGAGAAACAGGC...GAAGGCGTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS-3UTR CAA 90 bp | GAACATGCTGTGGCACATGGTAGACCTGGGCGTTTGGAGCCTGGCCTGCAGGGATCCACTGCTTTGGTGTaGGATTTGTCGTTCCCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: EHAVAHGRPGRLEPGLQGSTALV*DLSFPW Trigger: CCACGGGAACGACAAATCCAACACCAAAGCAGTGGA...TCCCTGCAGGCCAGGCTCCAAACGCCCAGGTCTACCATGTGCCACAGCATGTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026500.12 |
||
| CDS-3UTR CAA 90 bp | TTGGAGCCTGGCCTGCAGGGAGTGTGTGGTCACTCTAGTGCTTTGGGGATTGCATTCTTCTCCGTGGCATaGGCCTCCGCTCCTATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LEPGLQGVCGHSSALGIAFFSVA*ASAPIH Trigger: GTGGATAGGAGCGGAGGCCAATGCCACGGAGAAGAA...TGCAATCCCCAAAGCACTAGAGTGACCACACACTCCCTGCAGGCCAGGCTCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026500.12 |
||
| CDS CCA 90 bp | CTCGTAGATAACCAGCTTTCCTTTGAAGATGGCCATGAAGTGGCGTaGCTCCTTCCCCATGCTAACCCGGACCTGCACAGGGGCTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: LVDNQLSFEDGHEVA*LLPHANPDLHRGSI Trigger: GATGGAGCCCCTGTGCAGGTCCGGGTTAGCATGGGGAAGGAGCCACGCCACTTCATGGCCATCTTCAAAGGAAAGCTGGTTATCTACGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS CCA 90 bp | GAGACCTCCACTGCTTTGGTGTTGGATTTGTCGTTCCCGTGGATCTaGAAGAGCCTTACTGGAGGGTCCGGCTCCTCGTTTCCCTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: ETSTALVLDLSFPWI*KSLTGGSGSSFPFL Trigger: CAGGAAGGGAAACGAGGAGCCGGACCCTCCAGTAAGGCTCTTCCAGATCCACGGGAACGACAAATCCAACACCAAAGCAGTGGAGGTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS-3UTR CAA 90 bp | GCTGATGTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACTCCACTGCTTTGGTGTaGGATTTGTCGTTCCCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: ADVGTASLLSPVAGQQTHSTALV*DLSFPW Trigger: CCACGGGAACGACAAATCCAACACCAAAGCAGTGGA...GTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACATCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS-3UTR CAA 90 bp | GCTGATGTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACAGCAGAAAGACGTCGTaGGAGTTGAGCGAGGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: ADVGTASLLSPVAGQQTHSRKTS*ELSEEA Trigger: TGCTTCCTCGCTCAACTCCAACGACGTCTTTCTGCT...GTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACATCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS-3UTR CAA 90 bp | ATGTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACGCCTAAGCGGCCAGTCTTATaGGAACACTCAAAGAGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: MLALLVCSLLWPGSRHTPKRPVL*EHSKSR Trigger: CCGGCTCTTTGAGTGTTCCAATAAGACTGGCCGCTT...AGGCGTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS-3UTR CAA 90 bp | ATGTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACGCCTTTCGCACAATGGCAGTaGCATCTCCCAGCTCGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: MLALLVCSLLWPGSRHTPFAQWQ*HLPARS Trigger: AGAACGAGCTGGGAGATGCAACTGCCATTGTGCGAA...AGGCGTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS-3UTR CAA 90 bp | GTTTGGAGCCTGGCCTGCAGGGAGTGTGTGGTCACTCTAGTGCTTTGGGGATTGGCCTGTTTCTCAACCTaGGTGGCTCCTTTGCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VWSLACRECVVTLVLWGLACFST*VAPLPF Trigger: GAAAGGCAAAGGAGCCACCAAGGTTGAGAAACAGGC...CAATCCCCAAAGCACTAGAGTGACCACACACTCCCTGCAGGCCAGGCTCCAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026500.12 |
||
| CDS-3UTR CAA 90 bp | GCTGATGTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACTTCTGGAACAACTGTTaGAACATGGCCGACTCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: ADVGTASLLSPVAGQQTHFWNNC*NMADSA Trigger: CGCAGAGTCGGCCATGTTCAAACAGTTGTTCCAGAA...GTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACATCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS-3UTR CAA 90 bp | TTGGAGCCTGGCCTGCAGGGAGTGTGTGGTCACTCTAGTGCTTTGGGGATTGCATTCGCACAATGGCAGTaGCATCTCCCAGCTCGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LEPGLQGVCGHSSALGIAFAQWQ*HLPARS Trigger: AGAACGAGCTGGGAGATGCAACTGCCATTGTGCGAA...TGCAATCCCCAAAGCACTAGAGTGACCACACACTCCCTGCAGGCCAGGCTCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026500.12 |
||
| CDS-3UTR CAA 90 bp | GCTGATGTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACGGGTATCCCTTCATCTaGATGAAATCCAGGGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: ADVGTASLLSPVAGQQTHGYPFI*MKSRAL Trigger: CAAAGCCCTGGATTTCATCAAGATGAAGGGATACCC...GTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACATCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS-3UTR CAA 90 bp | AAGTTGAACATGCTGTGGCACATGGTAGACCTGGGCGTTTGGAGCCTGGCCTGCTTCTGGAACAACTGTTaGAACATGGCCGACTCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: KLNMLWHMVDLGVWSLACFWNNC*NMADSA Trigger: CGCAGAGTCGGCCATGTTCAAACAGTTGTTCCAGAA...GCAGGCCAGGCTCCAAACGCCCAGGTCTACCATGTGCCACAGCATGTTCAACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026500.12 |
||
| CDS-3UTR CAA 90 bp | AAAGTTGAACATGCTGTGGCACATGGTAGACCTGGGCGTTTGGAGCCTGGCCTGAAGCGGCCAGTCTTATaGGAACACTCAAAGAGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: KVEHAVAHGRPGRLEPGLKRPVL*EHSKSR Trigger: CCGGCTCTTTGAGTGTTCCAATAAGACTGGCCGCTT...CAGGCCAGGCTCCAAACGCCCAGGTCTACCATGTGCCACAGCATGTTCAACTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026500.12 |
||
| CDS-3UTR CAA 90 bp | GAACATGCTGTGGCACATGGTAGACCTGGGCGTTTGGAGCCTGGCCTGCAGGGACACAGATACAAAGTCTaGTTCCGAGAGGTAGTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: EHAVAHGRPGRLEPGLQGHRYKV*FREVVL Trigger: GAGAACTACCTCTCGGAACAAGACTTTGTATCTGTG...TCCCTGCAGGCCAGGCTCCAAACGCCCAGGTCTACCATGTGCCACAGCATGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026500.12 |
||
| CDS-3UTR CAA 90 bp | GTTTGGAGCCTGGCCTGCAGGGAGTGTGTGGTCACTCTAGTGCTTTGGGGATTGGGGTATCCCTTCATCTaGATGAAATCCAGGGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: VWSLACRECVVTLVLWGLGYPFI*MKSRAL Trigger: CAAAGCCCTGGATTTCATCAAGATGAAGGGATACCC...CAATCCCCAAAGCACTAGAGTGACCACACACTCCCTGCAGGCCAGGCTCCAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026500.12 |
||
| CDS-3UTR CAA 90 bp | TGCAGGGAGTGTGTGGTCACTCTAGTGCTTTGGGGATTGCAGGGTGTAGTTGGAAGCAGAAAGACGTCGTaGGAGTTGAGCGAGGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: CRECVVTLVLWGLQGVVGSRKTS*ELSEEA Trigger: TGCTTCCTCGCTCAACTCCAACGACGTCTTTCTGCT...TCCAACTACACCCTGCAATCCCCAAAGCACTAGAGTGACCACACACTCCCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026500.12 |
||
| CDS-3UTR CAA 90 bp | GCTGATGTTGGCACTGCTAGTTTGCTCTCTCCTGTGGCCGGGCAGCAGACACACCACAGATACAAAGTCTaGTTCCGAGAGGTAGTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: ADVGTASLLSPVAGQQTHHRYKV*FREVVL Trigger: GAGAACTACCTCTCGGAACAAGACTTTGTATCTGTG...GTGTGTCTGCTGCCCGGCCACAGGAGAGAGCAAACTAGCAGTGCCAACATCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS CCA 90 bp | AATATTTTCCCCAAGCCCGTGGTCTGGTCCTTCACCGACCATTTCTaGAACAACTGTTTGAACATGGCCGACTCTGCGCCATCGTTGACG | + |
|
Preference number: 5 (lower is better) Translates to: NIFPKPVVWSFTDHF*NNCLNMADSAPSLT Trigger: CGTCAACGATGGCGCAGAGTCGGCCATGTTCAAACAGTTGTTCCAGAAATGGTCGGTGAAGGACCAGACCACGGGCTTGGGGAAAATATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS GCA 90 bp | CGGGTAGTACTTTGGCTCACCGTCACTAGGATTCAGGTAAAGTGTTaGGTTCTTCATGTCAGCGGTGATTCGCACAATGGCAGTTGCATC | + |
|
Preference number: 5 (lower is better) Translates to: RVVLWLTVTRIQVKC*VLHVSGDSHNGSCI Trigger: GATGCAACTGCCATTGTGCGAATCACCGCTGACATGAAGAACGCAACACTTTACCTGAATCCTAGTGACGGTGAGCCAAAGTACTACCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS CCA 90 bp | CTCCTGGTTCTGACCTTTCAGCAGAACTTCCACCGGGTAGTACTTTaGCTCACCGTCACTAGGATTCAGGTAAAGTGTTGCGTTCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: LLVLTFQQNFHRVVL*LTVTRIQVKCCVLH Trigger: ATGAAGAACGCAACACTTTACCTGAATCCTAGTGACGGTGAGCCAAAGTACTACCCGGTGGAAGTTCTGCTGAAAGGTCAGAACCAGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS TCA 90 bp | GTTGCCACCTCTGTGACTGACAGCTGCCCAGCTGTGTCGGAGACATaGTATAACATGATACTTGATTTCTGTTGTTGGTCCATGATCTCA | + |
|
Preference number: 5 (lower is better) Translates to: VATSVTDSCPAVSET*YNMILDFCCWSMIS Trigger: TGAGATCATGGACCAACAACAGAAATCAAGTATCATGTTATATCATGTCTCCGACACAGCTGGGCAGCTGTCAGTCACAGAGGTGGCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS TCA 72 bp | GGGTCTCGGCCACTAGGATGTGTGACCAGGTACTCCTaGGCCGTCGAGAGGGCCCCCTTCTTCTCCGTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: GSRPLGCVTRYS*AVERAPFFSVA Trigger: TGCCACGGAGAAGAAGGGGGCCCTCTCGACGGCTCAGGAGTACCTGGTCACACATCCTAGTGGCCGAGACCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS CCA 72 bp | GAGCCGTCGAGAGGGCCCCCTTCTTCTCCGTGGCATTaGCCTCCGCTCCTATCCACAAGAACACCTGGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: EPSRGPPSSPWH*PPLLSTRTPGP Trigger: GGGACCAGGTGTTCTTGTGGATAGGAGCGGAGGCCAATGCCACGGAGAAGAAGGGGGCCCTCTCGACGGCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS CCA 72 bp | GCAGGCTTTATCATGGAGCGTCGACCAAGGGTATCCTaGAGGACTGTCATCAGCCCTGGGCTGGCCGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: AGFIMERRPRVS*RTVISPGLAAS Trigger: GGAGGCGGCCAGCCCAGGGCTGATGACAGTCCTCCAGGATACCCTTGGTCGACGCTCCATGATAAAGCCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS CAA 72 bp | TGGAGGACTGTCATCAGCCCTGGGCTGGCCGCCTCCTaGTCTCCCTCAATCACCCCAATTTCAGCACGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: WRTVISPGLAAS*SPSITPISARP Trigger: GGGCCGTGCTGAAATTGGGGTGATTGAGGGAGACAAGGAGGCGGCCAGCCCAGGGCTGATGACAGTCCTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS CCA 72 bp | ACTCCTGAGCCGTCGAGAGGGCCCCCTTCTTCTCCGTaGCATTGGCCTCCGCTCCTATCCACAAGAACACCT | + |
|
Preference number: 6 (lower is better) Translates to: TPEPSRGPPSSP*HWPPLLSTRTP Trigger: AGGTGTTCTTGTGGATAGGAGCGGAGGCCAATGCCACGGAGAAGAAGGGGGCCCTCTCGACGGCTCAGGAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS CAA 72 bp | TCAGGTGGCTCCTGGCCCTCAGCCACAGTGTCCGCATaGCCATCACAGAGAAGGTCGACCAGCTCCTTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SGGSWPSATVSA*PSQRRSTSSLA Trigger: GGCTAAGGAGCTGGTCGACCTTCTCTGTGATGGCAATGCGGACACTGTGGCTGAGGGCCAGGAGCCACCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
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| CDS TCA 72 bp | CTGCCTGAGTCCGCAGCAGAAAGACGTCGTTGGAGTTaGGCGAGGAAGCAGAGGCCGAGACCTCCACTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: LPESAAERRRWS*ARKQRPRPPLL Trigger: AAGCAGTGGAGGTCTCGGCCTCTGCTTCCTCGCTCAACTCCAACGACGTCTTTCTGCTGCGGACTCAGGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
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| CDS CAA 90 bp | AGCGAGGAAGCAGAGGCCGAGACCTCCACTGCTTTGGTGTTGGATTaGTCGTTCCCGTGGATCTGGAAGAGCCTTACTGGAGGGTCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: SEEAEAETSTALVLD*SFPWIWKSLTGGSG Trigger: GCCGGACCCTCCAGTAAGGCTCTTCCAGATCCACGGGAACGACAAATCCAACACCAAAGCAGTGGAGGTCTCGGCCTCTGCTTCCTCGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
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| CDS GCA 72 bp | CCCACTAGACCCCTTGCCGTACCACAGGTAGTGCTCTaGCTGAGTCCGCAGCAGAAAGACGTCGTTGGAGTT | + |
|
Preference number: 6 (lower is better) Translates to: PTRPLAVPQVVL*LSPQQKDVVGV Trigger: AACTCCAACGACGTCTTTCTGCTGCGGACTCAGGCAGAGCACTACCTGTGGTACGGCAAGGGGTCTAGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
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| CDS CCA 72 bp | TCCAGAAGCATCACATCACCTGGGCTCAGGTCCTCCTaGGTGAAGTCCGTGACCTCCGTAACAAGGAAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: SRSITSPGLRSS*VKSVTSVTRKR Trigger: CCGCTTCCTTGTTACGGAGGTCACGGACTTCACCCAGGAGGACCTGAGCCCAGGTGATGTGATGCTTCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
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| CDS CAA 90 bp | GAGTTGAGCGAGGAAGCAGAGGCCGAGACCTCCACTGCTTTGGTGTaGGATTTGTCGTTCCCGTGGATCTGGAAGAGCCTTACTGGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: ELSEEAEAETSTALV*DLSFPWIWKSLTGG Trigger: CCCTCCAGTAAGGCTCTTCCAGATCCACGGGAACGACAAATCCAACACCAAAGCAGTGGAGGTCTCGGCCTCTGCTTCCTCGCTCAACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
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| CDS CCA 72 bp | CCCAAGCCCGTGGTCTGGTCCTTCACCGACCATTTCTaGAACAACTGTTTGAACATGGCCGACTCTGCGCCA | + |
|
Preference number: 6 (lower is better) Translates to: PKPVVWSFTDHF*NNCLNMADSAP Trigger: TGGCGCAGAGTCGGCCATGTTCAAACAGTTGTTCCAGAAATGGTCGGTGAAGGACCAGACCACGGGCTTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
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| CDS CCA 72 bp | GGATTTGTCGTTCCCGTGGATCTGGAAGAGCCTTACTaGAGGGTCCGGCTCCTCGTTTCCCTTCCTGGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: GFVVPVDLEEPY*RVRLLVSLPGS Trigger: ACTTCCAGGAAGGGAAACGAGGAGCCGGACCCTCCAGTAAGGCTCTTCCAGATCCACGGGAACGACAAATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
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| CDS CCA 72 bp | ACCTCCACTGCTTTGGTGTTGGATTTGTCGTTCCCGTaGATCTGGAAGAGCCTTACTGGAGGGTCCGGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: TSTALVLDLSFP*IWKSLTGGSGS Trigger: GGAGCCGGACCCTCCAGTAAGGCTCTTCCAGATCCACGGGAACGACAAATCCAACACCAAAGCAGTGGAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
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| CDS CAA 72 bp | TCCGTGACCTCCGTAACAAGGAAGCGGCCAGTCTTATaGGAACACTCAAAGAGCCGGACCTGGACGTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SVTSVTRKRPVL*EHSKSRTWTSR Trigger: CCTGGACGTCCAGGTCCGGCTCTTTGAGTGTTCCAATAAGACTGGCCGCTTCCTTGTTACGGAGGTCACGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
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| CDS CAA 90 bp | AAGCCCGTGGTCTGGTCCTTCACCGACCATTTCTGGAACAACTGTTaGAACATGGCCGACTCTGCGCCATCGTTGACGGTCTCCACGTTG | + |
|
Preference number: 6 (lower is better) Translates to: KPVVWSFTDHFWNNC*NMADSAPSLTVSTL Trigger: CAACGTGGAGACCGTCAACGATGGCGCAGAGTCGGCCATGTTCAAACAGTTGTTCCAGAAATGGTCGGTGAAGGACCAGACCACGGGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
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| CDS GCA 72 bp | CCAGGTTCTCAATTCTCCAGACCTCAACCTGGCCTTTaGCGTCGTCCACCATTCTCTCCTGTGCAGCCACTT | + |
|
Preference number: 6 (lower is better) Translates to: PGSQFSRPQPGL*RRPPFSPVQPL Trigger: AAGTGGCTGCACAGGAGAGAATGGTGGACGACGGCAAAGGCCAGGTTGAGGTCTGGAGAATTGAGAACCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
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| CDS CCA 72 bp | GGGCTTTGGACATGGCCGCCTGTTTCTCAACCTTGGTaGCTCCTTTGCCTTTCCACACGTAGATCTTGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: GLWTWPPVSQPW*LLCLSTRRSWC Trigger: GCACCAAGATCTACGTGTGGAAAGGCAAAGGAGCCACCAAGGTTGAGAAACAGGCGGCCATGTCCAAAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
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| CDS CAA 72 bp | ATGGCCGACTCTGCGCCATCGTTGACGGTCTCCACGTaGGTGCTGCTGGGGTATCCCTTCATCTTGATGAAA | + |
|
Preference number: 6 (lower is better) Translates to: MADSAPSLTVST*VLLGYPFILMK Trigger: TTTCATCAAGATGAAGGGATACCCCAGCAGCACCAACGTGGAGACCGTCAACGATGGCGCAGAGTCGGCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS CAA 72 bp | GCAGAGGCCGAGACCTCCACTGCTTTGGTGTTGGATTaGTCGTTCCCGTGGATCTGGAAGAGCCTTACTGGA | + |
|
Preference number: 6 (lower is better) Translates to: AEAETSTALVLD*SFPWIWKSLTG Trigger: TCCAGTAAGGCTCTTCCAGATCCACGGGAACGACAAATCCAACACCAAAGCAGTGGAGGTCTCGGCCTCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS CAA 72 bp | GAGGAAGCAGAGGCCGAGACCTCCACTGCTTTGGTGTaGGATTTGTCGTTCCCGTGGATCTGGAAGAGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: EEAEAETSTALV*DLSFPWIWKSL Trigger: AAGGCTCTTCCAGATCCACGGGAACGACAAATCCAACACCAAAGCAGTGGAGGTCTCGGCCTCTGCTTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
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| CDS CAA 90 bp | TGTTTGAACATGGCCGACTCTGCGCCATCGTTGACGGTCTCCACGTaGGTGCTGCTGGGGTATCCCTTCATCTTGATGAAATCCAGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: CLNMADSAPSLTVST*VLLGYPFILMKSRA Trigger: AGCCCTGGATTTCATCAAGATGAAGGGATACCCCAGCAGCACCAACGTGGAGACCGTCAACGATGGCGCAGAGTCGGCCATGTTCAAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
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| CDS CCA 72 bp | ACTGCTTTGGTGTTGGATTTGTCGTTCCCGTGGATCTaGAAGAGCCTTACTGGAGGGTCCGGCTCCTCGTTT | + |
|
Preference number: 6 (lower is better) Translates to: TALVLDLSFPWI*KSLTGGSGSSF Trigger: AAACGAGGAGCCGGACCCTCCAGTAAGGCTCTTCCAGATCCACGGGAACGACAAATCCAACACCAAAGCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS CCA 72 bp | AGGAAGCAGAGGCCGAGACCTCCACTGCTTTGGTGTTaGATTTGTCGTTCCCGTGGATCTGGAAGAGCCTTA | + |
|
Preference number: 6 (lower is better) Translates to: RKQRPRPPLLWC*ICRSRGSGRAL Trigger: TAAGGCTCTTCCAGATCCACGGGAACGACAAATCCAACACCAAAGCAGTGGAGGTCTCGGCCTCTGCTTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS CAA 72 bp | TCGTCCACCATTCTCTCCTGTGCAGCCACTTCTGGCTaGGTGTGTAGCAGAGACACATCGAACTTGTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SSTILSCAATSG*VCSRDTSNLSW Trigger: CCAGGACAAGTTCGATGTGTCTCTGCTACACACCAAGCCAGAAGTGGCTGCACAGGAGAGAATGGTGGACGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS CAA 72 bp | CTGGGGTATCCCTTCATCTTGATGAAATCCAGGGCTTaGGACATGGCCGCCTGTTTCTCAACCTTGGTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: LGYPFILMKSRA*DMAACFSTLVA Trigger: AGCCACCAAGGTTGAGAAACAGGCGGCCATGTCCAAAGCCCTGGATTTCATCAAGATGAAGGGATACCCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS CAA 90 bp | CCTTTGCCGTCGTCCACCATTCTCTCCTGTGCAGCCACTTCTGGCTaGGTGTGTAGCAGAGACACATCGAACTTGTCCTGGAAGATTTTA | + |
|
Preference number: 6 (lower is better) Translates to: PLPSSTILSCAATSG*VCSRDTSNLSWKIL Trigger: TAAAATCTTCCAGGACAAGTTCGATGTGTCTCTGCTACACACCAAGCCAGAAGTGGCTGCACAGGAGAGAATGGTGGACGACGGCAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS CAA 90 bp | AGCAGTGAACTGCCCTCTCGTGATGCCAAACACAGATACAAAGTCTaGTTCCGAGAGGTAGTTCTCCTTTTTGGCGGGGTCCACATCCTC | + |
|
Preference number: 6 (lower is better) Translates to: SSELPSRDAKHRYKV*FREVVLLFGGVHIL Trigger: GAGGATGTGGACCCCGCCAAAAAGGAGAACTACCTCTCGGAACAAGACTTTGTATCTGTGTTTGGCATCACGAGAGGGCAGTTCACTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS CAA 72 bp | CTGCCCTCTCGTGATGCCAAACACAGATACAAAGTCTaGTTCCGAGAGGTAGTTCTCCTTTTTGGCGGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LPSRDAKHRYKV*FREVVLLFGGV Trigger: GACCCCGCCAAAAAGGAGAACTACCTCTCGGAACAAGACTTTGTATCTGTGTTTGGCATCACGAGAGGGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS GCA 72 bp | CTTTGGCTCACCGTCACTAGGATTCAGGTAAAGTGTTaGGTTCTTCATGTCAGCGGTGATTCGCACAATGGC | + |
|
Preference number: 6 (lower is better) Translates to: LWLTVTRIQVKC*VLHVSGDSHNG Trigger: GCCATTGTGCGAATCACCGCTGACATGAAGAACGCAACACTTTACCTGAATCCTAGTGACGGTGAGCCAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS CCA 72 bp | CTGACCTTTCAGCAGAACTTCCACCGGGTAGTACTTTaGCTCACCGTCACTAGGATTCAGGTAAAGTGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: LTFQQNFHRVVL*LTVTRIQVKCC Trigger: GCAACACTTTACCTGAATCCTAGTGACGGTGAGCCAAAGTACTACCCGGTGGAAGTTCTGCTGAAAGGTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
||
| CDS TCA 72 bp | TCTGTGACTGACAGCTGCCCAGCTGTGTCGGAGACATaGTATAACATGATACTTGATTTCTGTTGTTGGTCC | + |
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Preference number: 6 (lower is better) Translates to: SVTDSCPAVSET*YNMILDFCCWS Trigger: GGACCAACAACAGAAATCAAGTATCATGTTATATCATGTCTCCGACACAGCTGGGCAGCTGTCAGTCACAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
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| CDS CAA 72 bp | ACTTCTGGCTTGGTGTGTAGCAGAGACACATCGAACTaGTCCTGGAAGATTTTAGCGATTTTACCAGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: TSGLVCSRDTSN*SWKILAILPVL Trigger: CAGCACTGGTAAAATCGCTAAAATCTTCCAGGACAAGTTCGATGTGTCTCTGCTACACACCAAGCCAGAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
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| CDS CCA 72 bp | GGCTTGGTGTGTAGCAGAGACACATCGAACTTGTCCTaGAAGATTTTAGCGATTTTACCAGTGCTGAATATT | + |
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Preference number: 6 (lower is better) Translates to: GLVCSRDTSNLS*KILAILPVLNI Trigger: AATATTCAGCACTGGTAAAATCGCTAAAATCTTCCAGGACAAGTTCGATGTGTCTCTGCTACACACCAAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026500.12 ENSMUST00000129173.2 |
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