Pregenerated sensors for AVEN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003604Ensembl transcript IDs: ENSMUST00000003705.12, ENSMUST00000099588.4
Found 106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTTCTTGCTCACAGAACTGAGCGGGCTAGGGACAGAGTGAGACCATaGCCGTGTGGCCGCGAATCAATTCCCACCAGTCTTCCTAAAGGA | + |
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Preference number: 1 (lower is better) Translates to: FLAHRTERARDRVRP*PCGRESIPTSLPKG Trigger: TCCTTTAGGAAGACTGGTGGGAATTGATTCGCGGCCACACGGGCATGGTCTCACTCTGTCCCTAGCCCGCTCAGTTCTGTGAGCAAGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
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| 3UTR CCA 90 bp | GTGGGAGGACAGCAGAGAGAAAACGACAACGACAAACGGAGTGGGTaGCTGGAACAAGAGCAGGAGATGCAGAGTAAGACAGTGGGAGAG | + |
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Preference number: 1 (lower is better) Translates to: VGGQQRENDNDKRSG*LEQEQEMQSKTVGE Trigger: CTCTCCCACTGTCTTACTCTGCATCTCCTGCTCTTGTTCCAGCCACCCACTCCGTTTGTCGTTGTCGTTTTCTCTCTGCTGTCCTCCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
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| 3UTR CCA 90 bp | GTAAGACAGTGGGAGAGACAGCATAAGAAAGAGCGGCCTTGTATGTaGGCGACAACAGGAATGTGGAGGTGTGGAGAGAGGATGAGTGAG | + |
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Preference number: 1 (lower is better) Translates to: VRQWERQHKKERPCM*ATTGMWRCGERMSE Trigger: CTCACTCATCCTCTCTCCACACCTCCACATTCCTGTTGTCGCCCACATACAAGGCCGCTCTTTCTTATGCTGTCTCTCCCACTGTCTTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
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| 3UTR CCA 90 bp | GTTCCCTGCAGCACTGCTTGTGGTCAGCTGCCAGTTAAATGTGCCTaGAGAAGAACCTGTTTCCCAGACCCATCTCTTCTGTATGGTGGA | + |
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Preference number: 1 (lower is better) Translates to: VPCSTACGQLPVKCA*RRTCFPDPSLLYGG Trigger: TCCACCATACAGAAGAGATGGGTCTGGGAAACAGGTTCTTCTCCAGGCACATTTAACTGGCAGCTGACCACAAGCAGTGCTGCAGGGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
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| 3UTR CCA 90 bp | TTTCAAGCCACTGTGCTTACTGCTTCTCTGTACAATAGCTGGAGGTaGGAGGACAGCAGAGAGAAAACGACAACGACAAACGGAGTGGGT | + |
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Preference number: 1 (lower is better) Translates to: FQATVLTASLYNSWR*EDSREKTTTTNGVG Trigger: ACCCACTCCGTTTGTCGTTGTCGTTTTCTCTCTGCTGTCCTCCCACCTCCAGCTATTGTACAGAGAAGCAGTAAGCACAGTGGCTTGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
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| 3UTR TCA 90 bp | GACTACTGGAGTCAGGGACATGAGACAAGTGGCCCAGGGGCTTCGTaGAGAAAGGAAACATCCATAGACCAGAAGGTGTTTATTTTGACC | + |
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Preference number: 1 (lower is better) Translates to: DYWSQGHETSGPGAS*RKETSIDQKVFILT Trigger: GGTCAAAATAAACACCTTCTGGTCTATGGATGTTTCCTTTCTTCACGAAGCCCCTGGGCCACTTGTCTCATGTCCCTGACTCCAGTAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
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| 3UTR CCA 90 bp | CTGACATTTCAAGCCACTGTGCTTACTGCTTCTCTGTACAATAGCTaGAGGTGGGAGGACAGCAGAGAGAAAACGACAACGACAAACGGA | + |
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Preference number: 1 (lower is better) Translates to: LTFQATVLTASLYNS*RWEDSREKTTTTNG Trigger: TCCGTTTGTCGTTGTCGTTTTCTCTCTGCTGTCCTCCCACCTCCAGCTATTGTACAGAGAAGCAGTAAGCACAGTGGCTTGAAATGTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
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| 3UTR TCA 90 bp | TATGTGGGCGACAACAGGAATGTGGAGGTGTGGAGAGAGGATGAGTaGGGAGCTGTGTCACAGAATTCTGTGACTAACTATGAAAAGAAA | + |
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Preference number: 1 (lower is better) Translates to: YVGDNRNVEVWREDE*GAVSQNSVTNYEKK Trigger: TTTCTTTTCATAGTTAGTCACAGAATTCTGTGACACAGCTCCTCACTCATCCTCTCTCCACACCTCCACATTCCTGTTGTCGCCCACATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
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| 3UTR TCA 90 bp | CTTGAGACTAATTCCCTTAAATACCACCTGTTATGCTGTAAATGTTaGCAGGAAGGAGGTTCAAAATGTAGCTGTGACATCCCCTGTCCT | + |
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Preference number: 1 (lower is better) Translates to: LETNSLKYHLLCCKC*QEGGSKCSCDIPCP Trigger: AGGACAGGGGATGTCACAGCTACATTTTGAACCTCCTTCCTGTCAACATTTACAGCATAACAGGTGGTATTTAAGGGAATTAGTCTCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
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| 3UTR CCA 90 bp | AAGGAAGTCACACAGAGCAAAAGCAAACTGGACTTTAGCTTATTGTaGTTTCACACAAGTATCACTTGTTCGCACTGTTTCAGGAATCCT | + |
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Preference number: 1 (lower is better) Translates to: KEVTQSKSKLDFSLL*FHTSITCSHCFRNP Trigger: AGGATTCCTGAAACAGTGCGAACAAGTGATACTTGTGTGAAACCACAATAAGCTAAAGTCCAGTTTGCTTTTGCTCTGTGTGACTTCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
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| 3UTR-3UTR GCA 90 bp | GCAGCACTGCTTGTGGTCAGCTGCCAGTTAAATGTGCCTGGAGAAGAACCTGTTGCCCAGAGGTTCCCCTaGCTCTGCCTCCGCCTCCGC | + |
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Preference number: 2 (lower is better) Translates to: AALLVVSCQLNVPGEEPVAQRFP*LCLRLR Trigger: GCGGAGGCGGAGGCAGAGGCAGGGGAACCTCTGGGC...AACAGGTTCTTCTCCAGGCACATTTAACTGGCAGCTGACCACAAGCAGTGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
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| 3UTR-3UTR TCA 90 bp | CTCCGCCTCCGCCTCCTGCGTGCTGGGATTAAGCATGAGCCCCTCCATGACACACTCTGTCTTACGTCATaGCACTGCACTTGCAGGTTA | + |
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Preference number: 2 (lower is better) Translates to: LRLRLLRAGIKHEPLHDTLCLTS*HCTCRL Trigger: TAACCTGCAAGTGCAGTGTCATGACGTAAGACAGAG...TGTGTCATGGAGGGGCTCATGCTTAATCCCAGCACGCAGGAGGCGGAGGCGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
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| 3UTR-3UTR GCA 90 bp | GCAGCACTGCTTGTGGTCAGCTGCCAGTTAAATGTGCCTGGAGAAGAACCTGTTTCCGCCTCCGCCTCCTaGGTGCTGGGATTAAGCATG | + |
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Preference number: 2 (lower is better) Translates to: AALLVVSCQLNVPGEEPVSASAS*VLGLSM Trigger: CATGCTTAATCCCAGCACGCAGGAGGCGGAGGCGGA...AACAGGTTCTTCTCCAGGCACATTTAACTGGCAGCTGACCACAAGCAGTGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
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| 3UTR-3UTR GCA 90 bp | CTCCGCCTCCGCCTCCTGCGTGCTGGGATTAAGCATGAGCCCCTCCATGACACACATTTCAAGCCACTGTaGTTACTGCTTCTCTGTACA | + |
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Preference number: 2 (lower is better) Translates to: LRLRLLRAGIKHEPLHDTHFKPL*LLLLCT Trigger: TGTACAGAGAAGCAGTAAGCACAGTGGCTTGAAATG...TGTGTCATGGAGGGGCTCATGCTTAATCCCAGCACGCAGGAGGCGGAGGCGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
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| 3UTR-3UTR CCA 90 bp | CTCCGCCTCCGCCTCCTGCGTGCTGGGATTAAGCATGAGCCCCTCCATGACACATGCAGAGTAAGACAGTaGGAGAGACAGCATAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: LRLRLLRAGIKHEPLHDTCRVRQ*ERQHKK Trigger: TTTCTTATGCTGTCTCTCCCACTGTCTTACTCTGCA...TGTGTCATGGAGGGGCTCATGCTTAATCCCAGCACGCAGGAGGCGGAGGCGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
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| 3UTR-3UTR TCA 90 bp | GCAGCACTGCTTGTGGTCAGCTGCCAGTTAAATGTGCCTGGAGAAGAACCTGTTGTGAGAGTTCTATGGTaGTGTCAGTCTCTTCCCCAA | + |
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Preference number: 2 (lower is better) Translates to: AALLVVSCQLNVPGEEPVVRVLW*CQSLPQ Trigger: TTGGGGAAGAGACTGACATCACCATAGAACTCTCAC...AACAGGTTCTTCTCCAGGCACATTTAACTGGCAGCTGACCACAAGCAGTGCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
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| 3UTR-3UTR CCA 90 bp | GCAGCACTGCTTGTGGTCAGCTGCCAGTTAAATGTGCCTGGAGAAGAACCTGTTTTTGTGCACGAAGGATaGCAAAGTGTCAAGGAATCC | + |
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Preference number: 2 (lower is better) Translates to: AALLVVSCQLNVPGEEPVFVHEG*QSVKES Trigger: GGATTCCTTGACACTTTGCCATCCTTCGTGCACAAA...AACAGGTTCTTCTCCAGGCACATTTAACTGGCAGCTGACCACAAGCAGTGCTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
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| 3UTR-3UTR TCA 90 bp | TATGGTGGAAATAAATCCTCAACCTTGGGAGAGGTAAAGAAGCTGCTGTTGGAGACCCTTGCCAGGGACTaGTGGGCAGAACTACACAAA | + |
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Preference number: 2 (lower is better) Translates to: YGGNKSSTLGEVKKLLLETLARD*WAELHK Trigger: TTTGTGTAGTTCTGCCCATCAGTCCCTGGCAAGGGT...CTCCAACAGCAGCTTCTTTACCTCTCCCAAGGTTGAGGATTTATTTCCACCATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
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| 3UTR-3UTR CCA 90 bp | GCAGCACTGCTTGTGGTCAGCTGCCAGTTAAATGTGCCTGGAGAAGAACCTGTTAAATCCAAACGTCAATaGGCAGGAAAACTTCATAGC | + |
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Preference number: 2 (lower is better) Translates to: AALLVVSCQLNVPGEEPVKSKRQ*AGKLHS Trigger: GCTATGAAGTTTTCCTGCCCATTGACGTTTGGATTT...AACAGGTTCTTCTCCAGGCACATTTAACTGGCAGCTGACCACAAGCAGTGCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
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| 3UTR-3UTR CCA 90 bp | TATGGTGGAAATAAATCCTCAACCTTGGGAGAGGTAAAGAAGCTGCTGTTGGAGTCTCTGTACAATAGCTaGAGGTGGGAGGACAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: YGGNKSSTLGEVKKLLLESLYNS*RWEDSR Trigger: TCTGCTGTCCTCCCACCTCCAGCTATTGTACAGAGA...CTCCAACAGCAGCTTCTTTACCTCTCCCAAGGTTGAGGATTTATTTCCACCATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
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| 3UTR CAA 90 bp | CAAATGGGCTTAGGTCTTTGGGAGTTACTAAAGCTCTCCCCTCACTaGCTTGGAGATAAGCATCTATCATTCTTAGATGCTTCCCTGGTT | + |
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Preference number: 2 (lower is better) Translates to: QMGLGLWELLKLSPH*LGDKHLSFLDASLV Trigger: AACCAGGGAAGCATCTAAGAATGATAGATGCTTATCTCCAAGCAAGTGAGGGGAGAGCTTTAGTAACTCCCAAAGACCTAAGCCCATTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
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| 3UTR-3UTR TCA 90 bp | TATGGTGGAAATAAATCCTCAACCTTGGGAGAGGTAAAGAAGCTGCTGTTGGAGCAAGTTATTCTACAGTaGCCTGACTACTGGAGTCAG | + |
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Preference number: 2 (lower is better) Translates to: YGGNKSSTLGEVKKLLLEQVILQ*PDYWSQ Trigger: CTGACTCCAGTAGTCAGGTCACTGTAGAATAACTTG...CTCCAACAGCAGCTTCTTTACCTCTCCCAAGGTTGAGGATTTATTTCCACCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
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| 3UTR-3UTR TCA 90 bp | CATGACACTGCACTTGCAGGTTATTCACGTCATTTCTTCAGTAACAGCTTGTCATATACCAAACTTGAGTaGTGCAATATGGTCCCATGT | + |
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Preference number: 2 (lower is better) Translates to: HDTALAGYSRHFFSNSLSYTKLE*CNMVPC Trigger: ACATGGGACCATATTGCATCACTCAAGTTTGGTATA...TGACAAGCTGTTACTGAAGAAATGACGTGAATAACCTGCAAGTGCAGTGTCATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
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| 3UTR CAA 90 bp | CTAAAGGAAGTCACACAGAGCAAAAGCAAACTGGACTTTAGCTTATaGTGGTTTCACACAAGTATCACTTGTTCGCACTGTTTCAGGAAT | + |
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Preference number: 2 (lower is better) Translates to: LKEVTQSKSKLDFSL*WFHTSITCSHCFRN Trigger: ATTCCTGAAACAGTGCGAACAAGTGATACTTGTGTGAAACCACAATAAGCTAAAGTCCAGTTTGCTTTTGCTCTGTGTGACTTCCTTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
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| 3UTR-3UTR TCA 90 bp | CATGACACTGCACTTGCAGGTTATTCACGTCATTTCTTCAGTAACAGCTTGTCATTATGCTGTAAATGTTaGCAGGAAGGAGGTTCAAAA | + |
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Preference number: 2 (lower is better) Translates to: HDTALAGYSRHFFSNSLSLCCKC*QEGGSK Trigger: TTTTGAACCTCCTTCCTGTCAACATTTACAGCATAA...TGACAAGCTGTTACTGAAGAAATGACGTGAATAACCTGCAAGTGCAGTGTCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
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| 3UTR-3UTR CCA 90 bp | TATGGTGGAAATAAATCCTCAACCTTGGGAGAGGTAAAGAAGCTGCTGTTGGAGGACTTTAGCTTATTGTaGTTTCACACAAGTATCACT | + |
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Preference number: 2 (lower is better) Translates to: YGGNKSSTLGEVKKLLLEDFSLL*FHTSIT Trigger: AGTGATACTTGTGTGAAACCACAATAAGCTAAAGTC...CTCCAACAGCAGCTTCTTTACCTCTCCCAAGGTTGAGGATTTATTTCCACCATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
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| 3UTR CAA 90 bp | TCATGTTCAACTCATGTTACCTTCGATCTAATTTTTCCATGGTACTaGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGCTTTAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: SCSTHVTFDLIFPWY*LVTVSRISLKSFKQ Trigger: CTGCTTAAAGCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACATGAGTTGAACATGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
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| 3UTR CAA 90 bp | AACATCCATAGACCAGAAGGTGTTTATTTTGACCAACTTCATGCCTaGAGACTAATTCCCTTAAATACCACCTGTTATGCTGTAAATGTT | + |
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Preference number: 2 (lower is better) Translates to: NIHRPEGVYFDQLHA*RLIPLNTTCYAVNV Trigger: AACATTTACAGCATAACAGGTGGTATTTAAGGGAATTAGTCTCAAGGCATGAAGTTGGTCAAAATAAACACCTTCTGGTCTATGGATGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
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| 3UTR CCA 72 bp | TGGGAGAGACAGCATAAGAAAGAGCGGCCTTGTATGTaGGCGACAACAGGAATGTGGAGGTGTGGAGAGAGG | + |
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Preference number: 3 (lower is better) Translates to: WERQHKKERPCM*ATTGMWRCGER Trigger: CCTCTCTCCACACCTCCACATTCCTGTTGTCGCCCACATACAAGGCCGCTCTTTCTTATGCTGTCTCTCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
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| 3UTR TCA 72 bp | CTAGAAGGGGCACAGGTTGGGTTACCCCTTCAGTCATaGCGGGAAGACTGTGATTTCTTGCTCACAGAACTG | + |
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Preference number: 3 (lower is better) Translates to: LEGAQVGLPLQS*REDCDFLLTEL Trigger: CAGTTCTGTGAGCAAGAAATCACAGTCTTCCCGTCATGACTGAAGGGGTAACCCAACCTGTGCCCCTTCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
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| 3UTR CCA 72 bp | CAGCAGAGAGAAAACGACAACGACAAACGGAGTGGGTaGCTGGAACAAGAGCAGGAGATGCAGAGTAAGACA | + |
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Preference number: 3 (lower is better) Translates to: QQRENDNDKRSG*LEQEQEMQSKT Trigger: TGTCTTACTCTGCATCTCCTGCTCTTGTTCCAGCCACCCACTCCGTTTGTCGTTGTCGTTTTCTCTCTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
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| 3UTR CCA 72 bp | CAAGCCACTGTGCTTACTGCTTCTCTGTACAATAGCTaGAGGTGGGAGGACAGCAGAGAGAAAACGACAACG | + |
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Preference number: 3 (lower is better) Translates to: QATVLTASLYNS*RWEDSREKTTT Trigger: CGTTGTCGTTTTCTCTCTGCTGTCCTCCCACCTCCAGCTATTGTACAGAGAAGCAGTAAGCACAGTGGCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
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| 3UTR CCA 72 bp | AGCACTGCTTGTGGTCAGCTGCCAGTTAAATGTGCCTaGAGAAGAACCTGTTTCCCAGACCCATCTCTTCTG | + |
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Preference number: 3 (lower is better) Translates to: STACGQLPVKCA*RRTCFPDPSLL Trigger: CAGAAGAGATGGGTCTGGGAAACAGGTTCTTCTCCAGGCACATTTAACTGGCAGCTGACCACAAGCAGTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
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| 3UTR TCA 72 bp | AGTCAGGGACATGAGACAAGTGGCCCAGGGGCTTCGTaGAGAAAGGAAACATCCATAGACCAGAAGGTGTTT | + |
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Preference number: 3 (lower is better) Translates to: SQGHETSGPGAS*RKETSIDQKVF Trigger: AAACACCTTCTGGTCTATGGATGTTTCCTTTCTTCACGAAGCCCCTGGGCCACTTGTCTCATGTCCCTGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
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| 3UTR CCA 72 bp | TCAGTCAAGATACAGAGGTTGAGCCCACAAGCCCTATaGCAGGGAATGACAGACGAGGAGATGTTAGTCATC | + |
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Preference number: 3 (lower is better) Translates to: SVKIQRLSPQAL*QGMTDEEMLVI Trigger: GATGACTAACATCTCCTCGTCTGTCATTCCCTGCCATAGGGCTTGTGGGCTCAACCTCTGTATCTTGACTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
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| 3UTR-3UTR CAA 90 bp | TATGGTGGAAATAAATCCTCAACCTTGGGAGAGGTAAAGAAGCTGCTGTTGGAGGAAGGCAACCAGCATTaGCTTCAGGCACTCTTCCCC | + |
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Preference number: 3 (lower is better) Translates to: YGGNKSSTLGEVKKLLLEEGNQH*LQALFP Trigger: GGGGAAGAGTGCCTGAAGCAAATGCTGGTTGCCTTC...CTCCAACAGCAGCTTCTTTACCTCTCCCAAGGTTGAGGATTTATTTCCACCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
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| 3UTR-3UTR CAA 90 bp | GCAGCACTGCTTGTGGTCAGCTGCCAGTTAAATGTGCCTGGAGAAGAACCTGTTTCACACAAGTATCACTaGTTCGCACTGTTTCAGGAA | + |
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Preference number: 3 (lower is better) Translates to: AALLVVSCQLNVPGEEPVSHKYH*FALFQE Trigger: TTCCTGAAACAGTGCGAACAAGTGATACTTGTGTGA...AACAGGTTCTTCTCCAGGCACATTTAACTGGCAGCTGACCACAAGCAGTGCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
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| 3UTR-3UTR CAA 90 bp | GCAGCACTGCTTGTGGTCAGCTGCCAGTTAAATGTGCCTGGAGAAGAACCTGTTGATTTGGTAATTAACTaGGCTTTTGTGCACGAAGGA | + |
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Preference number: 3 (lower is better) Translates to: AALLVVSCQLNVPGEEPVDLVIN*AFVHEG Trigger: TCCTTCGTGCACAAAAGCCAAGTTAATTACCAAATC...AACAGGTTCTTCTCCAGGCACATTTAACTGGCAGCTGACCACAAGCAGTGCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
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| 3UTR-3UTR CAA 90 bp | TATGGTGGAAATAAATCCTCAACCTTGGGAGAGGTAAAGAAGCTGCTGTTGGAGAAATGTCCCCTCAACTaGAACTCTCCTTTAGTCCCC | + |
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Preference number: 3 (lower is better) Translates to: YGGNKSSTLGEVKKLLLEKCPLN*NSPLVP Trigger: GGGGACTAAAGGAGAGTTCAAGTTGAGGGGACATTT...CTCCAACAGCAGCTTCTTTACCTCTCCCAAGGTTGAGGATTTATTTCCACCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
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| 3UTR TCA 72 bp | ACTCTTGTCATGTGCCACTCTCAAGTTATTCTACAGTaGCCTGACTACTGGAGTCAGGGACATGAGACAAGT | + |
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Preference number: 3 (lower is better) Translates to: TLVMCHSQVILQ*PDYWSQGHETS Trigger: ACTTGTCTCATGTCCCTGACTCCAGTAGTCAGGTCACTGTAGAATAACTTGAGAGTGGCACATGACAAGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
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| 3UTR-3UTR CAA 90 bp | TATGGTGGAAATAAATCCTCAACCTTGGGAGAGGTAAAGAAGCTGCTGTTGGAGACAACTAGCATGGCATaGAATATGCTAGAAGGGGCA | + |
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Preference number: 3 (lower is better) Translates to: YGGNKSSTLGEVKKLLLETTSMA*NMLEGA Trigger: TGCCCCTTCTAGCATATTCAATGCCATGCTAGTTGT...CTCCAACAGCAGCTTCTTTACCTCTCCCAAGGTTGAGGATTTATTTCCACCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
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| 3UTR TCA 72 bp | TGGGTCTTGACACTGAGTAGTACACAACGGGATACCTaGAGCTGTTCATCTCTTAGATGTATTTCTCCATCA | + |
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Preference number: 3 (lower is better) Translates to: WVLTLSSTQRDT*SCSSLRCISPS Trigger: TGATGGAGAAATACATCTAAGAGATGAACAGCTTCAGGTATCCCGTTGTGTACTACTCAGTGTCAAGACCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
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| 3UTR CCA 72 bp | ACACAGAGCAAAAGCAAACTGGACTTTAGCTTATTGTaGTTTCACACAAGTATCACTTGTTCGCACTGTTTC | + |
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Preference number: 3 (lower is better) Translates to: TQSKSKLDFSLL*FHTSITCSHCF Trigger: GAAACAGTGCGAACAAGTGATACTTGTGTGAAACCACAATAAGCTAAAGTCCAGTTTGCTTTTGCTCTGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
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| CDS-3UTR TCA 90 bp | CTCCGCCTCCGCCTCCTGCGTGCTGGGATTAAGCATGAGCCCCTCCATGACACACCAGCTCTTCCTCGGTaGCATTCTTCGATGTGCTTG | + |
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Preference number: 4 (lower is better) Translates to: LRLRLLRAGIKHEPLHDTPALPR*HSSMCL Trigger: CAAGCACATCGAAGAATGTCACCGAGGAAGAGCTGG...TGTGTCATGGAGGGGCTCATGCTTAATCCCAGCACGCAGGAGGCGGAGGCGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
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| CDS-3UTR GCA 90 bp | GGTAAACGAGCCCGTCCTCACAAGACGGGCTCATTACACAGAAGGCAACCAGCAACTGCAAGAGGCAGCTaGTCAAGGGCTCGAACCAGT | + |
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Preference number: 4 (lower is better) Translates to: GKRARPHKTGSLHRRQPATARGS*SRARTS Trigger: ACTGGTTCGAGCCCTTGAGCAGCTGCCTCTTGCAGT...TGCTGGTTGCCTTCTGTGTAATGAGCCCGTCTTGTGAGGACGGGCTCGTTTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
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| CDS-3UTR GCA 90 bp | GCAGCACTGCTTGTGGTCAGCTGCCAGTTAAATGTGCCTGGAGAAGAACCTGTTGCCTTAGACTGCCTCTaGCCAGAGACCTGGGGCAAG | + |
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Preference number: 4 (lower is better) Translates to: AALLVVSCQLNVPGEEPVALDCL*PETWGK Trigger: CTTGCCCCAGGTCTCTGGGCAGAGGCAGTCTAAGGC...AACAGGTTCTTCTCCAGGCACATTTAACTGGCAGCTGACCACAAGCAGTGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
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| CDS-3UTR GCA 90 bp | GCAGCACTGCTTGTGGTCAGCTGCCAGTTAAATGTGCCTGGAGAAGAACCTGTTGGCTTTGCCTTAGACTaGCTCTGCCCAGAGACCTGG | + |
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Preference number: 4 (lower is better) Translates to: AALLVVSCQLNVPGEEPVGFALD*LCPETW Trigger: CCAGGTCTCTGGGCAGAGGCAGTCTAAGGCAAAGCC...AACAGGTTCTTCTCCAGGCACATTTAACTGGCAGCTGACCACAAGCAGTGCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
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| CDS-3UTR CCA 90 bp | GAGACTGCTTTCGGAAGCAATATGAAGATCAGCTCGGGTAAACCTGAGTTCACGCTCTGCCCAGAGACCTaGGGCAAGCACCAGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ETAFGSNMKISSGKPEFTLCPET*GKHQQQ Trigger: CTGCTGCTGGTGCTTGCCCCAGGTCTCTGGGCAGAG...CGTGAACTCAGGTTTACCCGAGCTGATCTTCATATTGCTTCCGAAAGCAGTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
||
| CDS-3UTR TCA 90 bp | GAGACTGCTTTCGGAAGCAATATGAAGATCAGCTCGGGTAAACCTGAGTTCACGAGCTCAGGAGGACACTaGAGTCTGTGCCCCGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: ETAFGSNMKISSGKPEFTSSGGH*SLCPAE Trigger: CTCAGCGGGGCACAGACTTCAGTGTCCTCCTGAGCT...CGTGAACTCAGGTTTACCCGAGCTGATCTTCATATTGCTTCCGAAAGCAGTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
||
| CDS-3UTR TCA 90 bp | GAGACTGCTTTCGGAAGCAATATGAAGATCAGCTCGGGTAAACCTGAGTTCACGCAGGTGGTCTGCCACTaGCTGTGTTGGGGTAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ETAFGSNMKISSGKPEFTQVVCH*LCWGRC Trigger: GCACCTACCCCAACACAGTCAGTGGCAGACCACCTG...CGTGAACTCAGGTTTACCCGAGCTGATCTTCATATTGCTTCCGAAAGCAGTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
||
| CDS-3UTR TCA 90 bp | GAGACTGCTTTCGGAAGCAATATGAAGATCAGCTCGGGTAAACCTGAGTTCACGAAGGGCTCGAACCAGTaGCTCACTGTCCACGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ETAFGSNMKISSGKPEFTKGSNQ*LTVHVE Trigger: CTCTACGTGGACAGTGAGTCACTGGTTCGAGCCCTT...CGTGAACTCAGGTTTACCCGAGCTGATCTTCATATTGCTTCCGAAAGCAGTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
||
| CDS-3UTR TCA 90 bp | GGTAAACGAGCCCGTCCTCACAAGACGGGCTCATTACACAGAAGGCAACCAGCACTCCACTTTCACCATTaGCCTCCTTTTCAGTATCTT | + |
|
Preference number: 4 (lower is better) Translates to: GKRARPHKTGSLHRRQPALHFHH*PPFQYL Trigger: AAGATACTGAAAAGGAGGTCAATGGTGAAAGTGGAG...TGCTGGTTGCCTTCTGTGTAATGAGCCCGTCTTGTGAGGACGGGCTCGTTTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
||
| CDS-3UTR GCA 90 bp | ACAACTAGCATGGCATTGAATATGCTAGAAGGGGCACAGGTTGGGTTACCCCTTTCCTCCTGGGCTACCTaGCCATCTTTTTCTGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TTSMALNMLEGAQVGLPLSSWAT*PSFSGS Trigger: GGAACCAGAAAAAGATGGGCAGGTAGCCCAGGAGGA...AAGGGGTAACCCAACCTGTGCCCCTTCTAGCATATTCAATGCCATGCTAGTTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
||
| CDS-3UTR CCA 90 bp | ACAACTAGCATGGCATTGAATATGCTAGAAGGGGCACAGGTTGGGTTACCCCTTGGACCTGTTTCCTCCTaGGCTACCTGCCCATCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TTSMALNMLEGAQVGLPLGPVSS*ATCPSF Trigger: AAAAGATGGGCAGGTAGCCCAGGAGGAAACAGGTCC...AAGGGGTAACCCAACCTGTGCCCCTTCTAGCATATTCAATGCCATGCTAGTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
||
| CDS-3UTR CCA 90 bp | GGTAAACGAGCCCGTCCTCACAAGACGGGCTCATTACACAGAAGGCAACCAGCACCACATTCTTCTCTCTaGTCACAGAAGGTTTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GKRARPHKTGSLHRRQPAPHSSL*SQKVFQ Trigger: CTGAAAAACCTTCTGTGACCAGAGAGAAGAATGTGG...TGCTGGTTGCCTTCTGTGTAATGAGCCCGTCTTGTGAGGACGGGCTCGTTTACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
||
| 3UTR CAA 72 bp | CTCTCCTTTAGTCCCCCAGTTACAACTAGCATGGCATaGAATATGCTAGAAGGGGCACAGGTTGGGTTACCC | + |
|
Preference number: 4 (lower is better) Translates to: LSFSPPVTTSMA*NMLEGAQVGLP Trigger: GGGTAACCCAACCTGTGCCCCTTCTAGCATATTCAATGCCATGCTAGTTGTAACTGGGGGACTAAAGGAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
||
| 3UTR CAA 72 bp | GACCAGGCCTCAGGTAGCATCAAATGTCCCCTCAACTaGAACTCTCCTTTAGTCCCCCAGTTACAACTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: DQASGSIKCPLN*NSPLVPQLQLA Trigger: TGCTAGTTGTAACTGGGGGACTAAAGGAGAGTTCAAGTTGAGGGGACATTTGATGCTACCTGAGGCCTGGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
||
| CDS-3UTR CCA 90 bp | ACAACTAGCATGGCATTGAATATGCTAGAAGGGGCACAGGTTGGGTTACCCCTTCTGCCCATCTTTTTCTaGTTCCTGGTCCCGAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: TTSMALNMLEGAQVGLPLLPIFF*FLVPRC Trigger: ACATCTCGGGACCAGGAACCAGAAAAAGATGGGCAG...AAGGGGTAACCCAACCTGTGCCCCTTCTAGCATATTCAATGCCATGCTAGTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
||
| CDS-3UTR TCA 90 bp | ACAACTAGCATGGCATTGAATATGCTAGAAGGGGCACAGGTTGGGTTACCCCTTGGTCTGGATCAATTCTaGAGCAACATTAAGCCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TTSMALNMLEGAQVGLPLGLDQF*SNIKPD Trigger: GTCCGGCTTAATGTTGCTTCAGAATTGATCCAGACC...AAGGGGTAACCCAACCTGTGCCCCTTCTAGCATATTCAATGCCATGCTAGTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
||
| CDS-3UTR GCA 90 bp | TATGGTGGAAATAAATCCTCAACCTTGGGAGAGGTAAAGAAGCTGCTGTTGGAGGCATGCCCAGCTCCTTaGCATCATCGTTTCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: YGGNKSSTLGEVKKLLLEACPAP*HHRFSL Trigger: CAAGGAGAAACGATGATGGCAAGGAGCTGGGCATGC...CTCCAACAGCAGCTTCTTTACCTCTCCCAAGGTTGAGGATTTATTTCCACCATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
||
| CDS-3UTR TCA 90 bp | TGTTATGCTGTAAATGTTGACAGGAAGGAGGTTCAAAATGTAGCTGTGACATCCAAGTCTGTGCCCCGCTaGGATTCTCCACTTTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: CYAVNVDRKEVQNVAVTSKSVPR*DSPLSP Trigger: TGGTGAAAGTGGAGAATCTCAGCGGGGCACAGACTT...GGATGTCACAGCTACATTTTGAACCTCCTTCCTGTCAACATTTACAGCATAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
||
| CDS-3UTR CCA 90 bp | ACAACTAGCATGGCATTGAATATGCTAGAAGGGGCACAGGTTGGGTTACCCCTTATCATCGTTTCTCCTTaGTTTCACCTGTGGAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TTSMALNMLEGAQVGLPLIIVSP*FHLWKF Trigger: GAACTTCCACAGGTGAAACCAAGGAGAAACGATGAT...AAGGGGTAACCCAACCTGTGCCCCTTCTAGCATATTCAATGCCATGCTAGTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
||
| CDS-3UTR CCA 90 bp | TATGGTGGAAATAAATCCTCAACCTTGGGAGAGGTAAAGAAGCTGCTGTTGGAGTCTTTTTCTGGTTCCTaGTCCCGAGATGTCTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: YGGNKSSTLGEVKKLLLESFSGS*SRDVWS Trigger: AGACCAGACATCTCGGGACCAGGAACCAGAAAAAGA...CTCCAACAGCAGCTTCTTTACCTCTCCCAAGGTTGAGGATTTATTTCCACCATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
||
| 3UTR CAA 72 bp | CTTGCAGGTTATTCACGTCATTTCTTCAGTAACAGCTaGTCACCTGCTGTTATCTGGAGAAAGGCACTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LAGYSRHFFSNS*SPAVIWRKALY Trigger: GTACAGTGCCTTTCTCCAGATAACAGCAGGTGACAAGCTGTTACTGAAGAAATGACGTGAATAACCTGCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
||
| CDS-3UTR GCA 90 bp | TGTTATGCTGTAAATGTTGACAGGAAGGAGGTTCAAAATGTAGCTGTGACATCCGGGGTAGGTGCTTTCTaGAAACCTTCTAAAGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: CYAVNVDRKEVQNVAVTSGVGAF*KPSKGL Trigger: AAGCCCTTTAGAAGGTTTGCAGAAAGCACCTACCCC...GGATGTCACAGCTACATTTTGAACCTCCTTCCTGTCAACATTTACAGCATAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
||
| CDS-3UTR GCA 90 bp | ACAACTAGCATGGCATTGAATATGCTAGAAGGGGCACAGGTTGGGTTACCCCTTACAGGTGCATCTAAATaGAGCAACATATCTAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TTSMALNMLEGAQVGLPLTGASK*SNISSS Trigger: AGAACTAGATATGTTGCTGCATTTAGATGCACCTGT...AAGGGGTAACCCAACCTGTGCCCCTTCTAGCATATTCAATGCCATGCTAGTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
||
| CDS-3UTR CCA 90 bp | TGTTATGCTGTAAATGTTGACAGGAAGGAGGTTCAAAATGTAGCTGTGACATCCAGTTCTTCTTCCAGGTaGTCTGCCACTGACTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: CYAVNVDRKEVQNVAVTSSSSSR*SATDCV Trigger: AACACAGTCAGTGGCAGACCACCTGGAAGAAGAACT...GGATGTCACAGCTACATTTTGAACCTCCTTCCTGTCAACATTTACAGCATAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
||
| CDS-3UTR CCA 90 bp | CATGACACTGCACTTGCAGGTTATTCACGTCATTTCTTCAGTAACAGCTTGTCAATTCTTCGATGTGCTTaGCTGCTCAGGTTCCACATT | + |
|
Preference number: 4 (lower is better) Translates to: HDTALAGYSRHFFSNSLSILRCA*LLRFHI Trigger: AATGTGGAACCTGAGCAGCCAAGCACATCGAAGAAT...TGACAAGCTGTTACTGAAGAAATGACGTGAATAACCTGCAAGTGCAGTGTCATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
||
| 3UTR CAA 72 bp | GTCACACAGAGCAAAAGCAAACTGGACTTTAGCTTATaGTGGTTTCACACAAGTATCACTTGTTCGCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: VTQSKSKLDFSL*WFHTSITCSHC Trigger: ACAGTGCGAACAAGTGATACTTGTGTGAAACCACAATAAGCTAAAGTCCAGTTTGCTTTTGCTCTGTGTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
||
| 3UTR CAA 72 bp | TTAGGTCTTTGGGAGTTACTAAAGCTCTCCCCTCACTaGCTTGGAGATAAGCATCTATCATTCTTAGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: LGLWELLKLSPH*LGDKHLSFLDA Trigger: AGCATCTAAGAATGATAGATGCTTATCTCCAAGCAAGTGAGGGGAGAGCTTTAGTAACTCCCAAAGACCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
||
| CDS-3UTR TCA 90 bp | CATGACACTGCACTTGCAGGTTATTCACGTCATTTCTTCAGTAACAGCTTGTCAATTCTGTTTTGGACATaGAGTTTCACCATCCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: HDTALAGYSRHFFSNSLSILFWT*SFTIPF Trigger: GAATGGGATGGTGAAACTTCATGTCCAAAACAGAAT...TGACAAGCTGTTACTGAAGAAATGACGTGAATAACCTGCAAGTGCAGTGTCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
||
| CDS-3UTR CCA 90 bp | CATGACACTGCACTTGCAGGTTATTCACGTCATTTCTTCAGTAACAGCTTGTCAAAAGGAATTGTGGTCTaGATCAATTCTGAAGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: HDTALAGYSRHFFSNSLSKGIVV*INSEAT Trigger: TGTTGCTTCAGAATTGATCCAGACCACAATTCCTTT...TGACAAGCTGTTACTGAAGAAATGACGTGAATAACCTGCAAGTGCAGTGTCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
||
| 3UTR CAA 72 bp | ACTCATGTTACCTTCGATCTAATTTTTCCATGGTACTaGCTAGTGACTGTCTCCAGAATCAGCTTGAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: THVTFDLIFPWY*LVTVSRISLKS Trigger: GCTTTTCAAGCTGATTCTGGAGACAGTCACTAGCAAGTACCATGGAAAAATTAGATCGAAGGTAACATGAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
||
| CDS-3UTR CCA 90 bp | TGTTATGCTGTAAATGTTGACAGGAAGGAGGTTCAAAATGTAGCTGTGACATCCGTTCTAAAGGAATTGTaGTCTGGATCAATTCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CYAVNVDRKEVQNVAVTSVLKEL*SGSILK Trigger: CTTCAGAATTGATCCAGACCACAATTCCTTTAGAAC...GGATGTCACAGCTACATTTTGAACCTCCTTCCTGTCAACATTTACAGCATAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
||
| 3UTR CAA 72 bp | AGACCAGAAGGTGTTTATTTTGACCAACTTCATGCCTaGAGACTAATTCCCTTAAATACCACCTGTTATGCT | + |
|
Preference number: 4 (lower is better) Translates to: RPEGVYFDQLHA*RLIPLNTTCYA Trigger: AGCATAACAGGTGGTATTTAAGGGAATTAGTCTCAAGGCATGAAGTTGGTCAAAATAAACACCTTCTGGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
||
| 3UTR CAA 72 bp | AATAAAGTAAAACATGCCAGTTCTGGGTTTGAACTCTaGTCATGTGCCACTCTCAAGTTATTCTACAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: NKVKHASSGFEL*SCATLKLFYSD Trigger: GTCACTGTAGAATAACTTGAGAGTGGCACATGACAAGAGTTCAAACCCAGAACTGGCATGTTTTACTTTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
||
| CDS CCA 90 bp | CTTCTCCATAGGTCTCTGAATCGCTGTCTTCTTCCACCCGAGTGCTaGCTCCGCCGCCCCGGCCTCCAGGCTCCCAGCGGCCGCCTCGCA | + |
|
Preference number: 5 (lower is better) Translates to: LLHRSLNRCLLPPEC*LRRPGLQAPSGRLA Trigger: TGCGAGGCGGCCGCTGGGAGCCTGGAGGCCGGGGCGGCGGAGCCAGCACTCGGGTGGAAGAAGACAGCGATTCAGAGACCTATGGAGAAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
||
| CDS TCA 90 bp | GACTGCCTCTGCCCAGAGACCTGGGGCAAGCACCAGCAGCAGATCTaGGCTCAGAGATGGGTCCCCTTAAATGCATGCCCAGCTCCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: DCLCPETWGKHQQQI*AQRWVPLNACPAPC Trigger: GCAAGGAGCTGGGCATGCATTTAAGGGGACCCATCTCTGAGCTCAGATCTGCTGCTGGTGCTTGCCCCAGGTCTCTGGGCAGAGGCAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003705.12 ENSMUST00000099588.4 |
||
| CDS-3UTR CAA 90 bp | CTCCGCCTCCGCCTCCTGCGTGCTGGGATTAAGCATGAGCCCCTCCATGACACATGGTCTGGAGAGATATaGCCTTCCTCTTGCACAGGT | + |
|
Preference number: 5 (lower is better) Translates to: LRLRLLRAGIKHEPLHDTWSGEI*PSSCTG Trigger: ACCTGTGCAAGAGGAAGGCAATATCTCTCCAGACCA...TGTGTCATGGAGGGGCTCATGCTTAATCCCAGCACGCAGGAGGCGGAGGCGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
||
| CDS-3UTR CAA 90 bp | CTCCGCCTCCGCCTCCTGCGTGCTGGGATTAAGCATGAGCCCCTCCATGACACACTCCTTTTCAGTATCTaGATAGCGATCCCAGTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LRLRLLRAGIKHEPLHDTLLFSI*IAIPVG Trigger: TCCAACTGGGATCGCTATCAAGATACTGAAAAGGAG...TGTGTCATGGAGGGGCTCATGCTTAATCCCAGCACGCAGGAGGCGGAGGCGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
||
| CDS-3UTR CAA 90 bp | CTCCGCCTCCGCCTCCTGCGTGCTGGGATTAAGCATGAGCCCCTCCATGACACACATCATCGTTTCTCCTaGGTTTCACCTGTGGAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: LRLRLLRAGIKHEPLHDTHHRFS*VSPVEV Trigger: AACTTCCACAGGTGAAACCAAGGAGAAACGATGATG...TGTGTCATGGAGGGGCTCATGCTTAATCCCAGCACGCAGGAGGCGGAGGCGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
||
| CDS GCA 90 bp | CAAGCACCAGCAGCAGATCTGAGCTCAGAGATGGGTCCCCTTAAATaGATGCCCAGCTCCTTGCCATCATCGTTTCTCCTTGGTTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: QAPAADLSSEMGPLK*MPSSLPSSFLLGFT Trigger: GGTGAAACCAAGGAGAAACGATGATGGCAAGGAGCTGGGCATGCATTTAAGGGGACCCATCTCTGAGCTCAGATCTGCTGCTGGTGCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003705.12 ENSMUST00000099588.4 |
||
| CDS CCA 90 bp | TGGGCTACCTGCCCATCTTTTTCTGGTTCCTGGTCCCGAGATGTCTaGTCTGGAGAGATATTGCCTTCCTCTTGCACAGGTGCATCTAAA | + |
|
Preference number: 5 (lower is better) Translates to: WATCPSFSGSWSRDV*SGEILPSSCTGASK Trigger: TTTAGATGCACCTGTGCAAGAGGAAGGCAATATCTCTCCAGACCAGACATCTCGGGACCAGGAACCAGAAAAAGATGGGCAGGTAGCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003705.12 ENSMUST00000099588.4 |
||
| CDS CCA 90 bp | TTTTTCAGGACCTGTTTCCTCCTGGGCTACCTGCCCATCTTTTTCTaGTTCCTGGTCCCGAGATGTCTGGTCTGGAGAGATATTGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FFRTCFLLGYLPIFF*FLVPRCLVWRDIAF Trigger: GAAGGCAATATCTCTCCAGACCAGACATCTCGGGACCAGGAACCAGAAAAAGATGGGCAGGTAGCCCAGGAGGAAACAGGTCCTGAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000003705.12 ENSMUST00000099588.4 |
||
| CDS CCA 90 bp | TTCTTCTCTCTGGTCACAGAAGGTTTTTCAGGACCTGTTTCCTCCTaGGCTACCTGCCCATCTTTTTCTGGTTCCTGGTCCCGAGATGTC | + |
|
Preference number: 5 (lower is better) Translates to: FFSLVTEGFSGPVSS*ATCPSFSGSWSRDV Trigger: GACATCTCGGGACCAGGAACCAGAAAAAGATGGGCAGGTAGCCCAGGAGGAAACAGGTCCTGAAAAACCTTCTGTGACCAGAGAGAAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000003705.12 ENSMUST00000099588.4 |
||
| CDS GCA 90 bp | TGGTCTGGAGAGATATTGCCTTCCTCTTGCACAGGTGCATCTAAATaGAGCAACATATCTAGTTCTTCTTCCAGGTGGTCTGCCACTGAC | + |
|
Preference number: 5 (lower is better) Translates to: WSGEILPSSCTGASK*SNISSSSSRWSATD Trigger: GTCAGTGGCAGACCACCTGGAAGAAGAACTAGATATGTTGCTGCATTTAGATGCACCTGTGCAAGAGGAAGGCAATATCTCTCCAGACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003705.12 ENSMUST00000099588.4 |
||
| CDS CCA 90 bp | ACAGGTGCATCTAAATGCAGCAACATATCTAGTTCTTCTTCCAGGTaGTCTGCCACTGACTGTGTTGGGGTAGGTGCTTTCTGCAAACCT | + |
|
Preference number: 5 (lower is better) Translates to: TGASKCSNISSSSSR*SATDCVGVGAFCKP Trigger: AGGTTTGCAGAAAGCACCTACCCCAACACAGTCAGTGGCAGACCACCTGGAAGAAGAACTAGATATGTTGCTGCATTTAGATGCACCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003705.12 ENSMUST00000099588.4 |
||
| CDS-3UTR CAA 90 bp | TATGGTGGAAATAAATCCTCAACCTTGGGAGAGGTAAAGAAGCTGCTGTTGGAGTGCATGCCCAGCTCCTaGCCATCATCGTTTCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: YGGNKSSTLGEVKKLLLECMPSS*PSSFLL Trigger: AAGGAGAAACGATGATGGCAAGGAGCTGGGCATGCA...CTCCAACAGCAGCTTCTTTACCTCTCCCAAGGTTGAGGATTTATTTCCACCATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
||
| CDS GCA 90 bp | CTTTTTCTGGTTCCTGGTCCCGAGATGTCTGGTCTGGAGAGATATTaGCTTCCTCTTGCACAGGTGCATCTAAATGCAGCAACATATCTA | + |
|
Preference number: 5 (lower is better) Translates to: LFLVPGPEMSGLERY*LPLAQVHLNAATYL Trigger: TAGATATGTTGCTGCATTTAGATGCACCTGTGCAAGAGGAAGGCAATATCTCTCCAGACCAGACATCTCGGGACCAGGAACCAGAAAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003705.12 ENSMUST00000099588.4 |
||
| CDS CCA 90 bp | TTTCTCCTTGGTTTCACCTGTGGAAGTTCTAAAGGAATTGTGGTCTaGATCAATTCTGAAGCAACATTAAGCCGGACTGCAAGAGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FLLGFTCGSSKGIVV*INSEATLSRTARGS Trigger: GCTGCCTCTTGCAGTCCGGCTTAATGTTGCTTCAGAATTGATCCAGACCACAATTCCTTTAGAACTTCCACAGGTGAAACCAAGGAGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003705.12 ENSMUST00000099588.4 |
||
| CDS-3UTR CAA 90 bp | TATGGTGGAAATAAATCCTCAACCTTGGGAGAGGTAAAGAAGCTGCTGTTGGAGGTGCTGAATTCTGTTTaGGACATGAAGTTTCACCAT | + |
|
Preference number: 5 (lower is better) Translates to: YGGNKSSTLGEVKKLLLEVLNSV*DMKFHH Trigger: ATGGTGAAACTTCATGTCCAAAACAGAATTCAGCAC...CTCCAACAGCAGCTTCTTTACCTCTCCCAAGGTTGAGGATTTATTTCCACCATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
||
| CDS-3UTR CAA 90 bp | TGTTATGCTGTAAATGTTGACAGGAAGGAGGTTCAAAATGTAGCTGTGACATCCTCTCCACTTTCACCATaGACCTCCTTTTCAGTATCT | + |
|
Preference number: 5 (lower is better) Translates to: CYAVNVDRKEVQNVAVTSSPLSP*TSFSVS Trigger: AGATACTGAAAAGGAGGTCAATGGTGAAAGTGGAGA...GGATGTCACAGCTACATTTTGAACCTCCTTCCTGTCAACATTTACAGCATAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
||
| CDS CCA 72 bp | AGGTCTCTGAATCGCTGTCTTCTTCCACCCGAGTGCTaGCTCCGCCGCCCCGGCCTCCAGGCTCCCAGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: RSLNRCLLPPEC*LRRPGLQAPSG Trigger: GCCGCTGGGAGCCTGGAGGCCGGGGCGGCGGAGCCAGCACTCGGGTGGAAGAAGACAGCGATTCAGAGACCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
||
| CDS GCA 72 bp | GCAAACCTTCTAAAGGGCTTTGCCTTAGACTGCCTCTaGCCAGAGACCTGGGGCAAGCACCAGCAGCAGATC | + |
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Preference number: 6 (lower is better) Translates to: ANLLKGFALDCL*PETWGKHQQQI Trigger: GATCTGCTGCTGGTGCTTGCCCCAGGTCTCTGGGCAGAGGCAGTCTAAGGCAAAGCCCTTTAGAAGGTTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003705.12 ENSMUST00000099588.4 |
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| CDS GCA 72 bp | GGGGTAGGTGCTTTCTGCAAACCTTCTAAAGGGCTTTaGCTTAGACTGCCTCTGCCCAGAGACCTGGGGCAA | + |
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Preference number: 6 (lower is better) Translates to: GVGAFCKPSKGL*LRLPLPRDLGQ Trigger: TTGCCCCAGGTCTCTGGGCAGAGGCAGTCTAAGGCAAAGCCCTTTAGAAGGTTTGCAGAAAGCACCTACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003705.12 ENSMUST00000099588.4 |
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| CDS CCA 72 bp | ACCTGTTTCCTCCTGGGCTACCTGCCCATCTTTTTCTaGTTCCTGGTCCCGAGATGTCTGGTCTGGAGAGAT | + |
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Preference number: 6 (lower is better) Translates to: TCFLLGYLPIFF*FLVPRCLVWRD Trigger: ATCTCTCCAGACCAGACATCTCGGGACCAGGAACCAGAAAAAGATGGGCAGGTAGCCCAGGAGGAAACAGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003705.12 ENSMUST00000099588.4 |
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| CDS TCA 72 bp | ACCATCCCATTCTTTCTCCTCAGCAAATCGGAACTGTaGAAAGGAGTCCCCTCCAATCTCCCGGGTTCCACG | + |
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Preference number: 6 (lower is better) Translates to: TIPFFLLSKSEL*KGVPSNLPGST Trigger: CGTGGAACCCGGGAGATTGGAGGGGACTCCTTTTCACAGTTCCGATTTGCTGAGGAGAAAGAATGGGATGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099588.4 |
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| CDS CCA 72 bp | CTGGTCACAGAAGGTTTTTCAGGACCTGTTTCCTCCTaGGCTACCTGCCCATCTTTTTCTGGTTCCTGGTCC | + |
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Preference number: 6 (lower is better) Translates to: LVTEGFSGPVSS*ATCPSFSGSWS Trigger: GGACCAGGAACCAGAAAAAGATGGGCAGGTAGCCCAGGAGGAAACAGGTCCTGAAAAACCTTCTGTGACCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000003705.12 ENSMUST00000099588.4 |
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| CDS CAA 72 bp | GGTTCCTGGTCCCGAGATGTCTGGTCTGGAGAGATATaGCCTTCCTCTTGCACAGGTGCATCTAAATGCAGC | + |
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Preference number: 6 (lower is better) Translates to: GSWSRDVWSGEI*PSSCTGASKCS Trigger: GCTGCATTTAGATGCACCTGTGCAAGAGGAAGGCAATATCTCTCCAGACCAGACATCTCGGGACCAGGAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003705.12 ENSMUST00000099588.4 |
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| CDS GCA 72 bp | TGGTCTGCCACTGACTGTGTTGGGGTAGGTGCTTTCTaGAAACCTTCTAAAGGGCTTTGCCTTAGACTGCCT | + |
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Preference number: 6 (lower is better) Translates to: WSATDCVGVGAF*KPSKGLCLRLP Trigger: AGGCAGTCTAAGGCAAAGCCCTTTAGAAGGTTTGCAGAAAGCACCTACCCCAACACAGTCAGTGGCAGACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003705.12 ENSMUST00000099588.4 |
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| CDS GCA 72 bp | GTTCCTGGTCCCGAGATGTCTGGTCTGGAGAGATATTaGCTTCCTCTTGCACAGGTGCATCTAAATGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: VPGPEMSGLERY*LPLAQVHLNAA Trigger: TGCTGCATTTAGATGCACCTGTGCAAGAGGAAGGCAATATCTCTCCAGACCAGACATCTCGGGACCAGGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003705.12 ENSMUST00000099588.4 |
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| CDS TCA 72 bp | AGTCTGTGCCCCGCTGAGATTCTCCACTTTCACCATTaGCCTCCTTTTCAGTATCTTGATAGCGATCCCAGT | + |
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Preference number: 6 (lower is better) Translates to: SLCPAEILHFHH*PPFQYLDSDPS Trigger: ACTGGGATCGCTATCAAGATACTGAAAAGGAGGTCAATGGTGAAAGTGGAGAATCTCAGCGGGGCACAGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
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| CDS CAA 90 bp | TCTTTTTCTGGTTCCTGGTCCCGAGATGTCTGGTCTGGAGAGATATaGCCTTCCTCTTGCACAGGTGCATCTAAATGCAGCAACATATCT | + |
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Preference number: 6 (lower is better) Translates to: SFSGSWSRDVWSGEI*PSSCTGASKCSNIS Trigger: AGATATGTTGCTGCATTTAGATGCACCTGTGCAAGAGGAAGGCAATATCTCTCCAGACCAGACATCTCGGGACCAGGAACCAGAAAAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003705.12 ENSMUST00000099588.4 |
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| CDS CAA 72 bp | AATGCATGCCCAGCTCCTTGCCATCATCGTTTCTCCTaGGTTTCACCTGTGGAAGTTCTAAAGGAATTGTGG | + |
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Preference number: 6 (lower is better) Translates to: NACPAPCHHRFS*VSPVEVLKELW Trigger: CCACAATTCCTTTAGAACTTCCACAGGTGAAACCAAGGAGAAACGATGATGGCAAGGAGCTGGGCATGCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003705.12 ENSMUST00000099588.4 |
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| CDS CAA 72 bp | TTCTCCACTTTCACCATTGACCTCCTTTTCAGTATCTaGATAGCGATCCCAGTTGGAGACAATCTTTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: FSTFTIDLLFSI*IAIPVGDNLSS Trigger: AGAAGAAAGATTGTCTCCAACTGGGATCGCTATCAAGATACTGAAAAGGAGGTCAATGGTGAAAGTGGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
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| CDS CAA 90 bp | CCGCTGAGATTCTCCACTTTCACCATTGACCTCCTTTTCAGTATCTaGATAGCGATCCCAGTTGGAGACAATCTTTCTTCTAGAAAAATT | + |
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Preference number: 6 (lower is better) Translates to: PLRFSTFTIDLLFSI*IAIPVGDNLSSRKI Trigger: AATTTTTCTAGAAGAAAGATTGTCTCCAACTGGGATCGCTATCAAGATACTGAAAAGGAGGTCAATGGTGAAAGTGGAGAATCTCAGCGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003705.12 |
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