Pregenerated sensors for AURKB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020897Ensembl transcript IDs: ENSMUST00000021277.6, ENSMUST00000108666.8
Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGAATCAGACTAGAGGGTTTCTTAAAAGTCAGTGCATGGGTGTTTTaGCTGCATACATGTATACCACATCCATGCCTAGTGTCTGCAGAG | + |
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Preference number: 1 (lower is better) Translates to: GIRLEGFLKVSAWVF*LHTCIPHPCLVSAE Trigger: CTCTGCAGACACTAGGCATGGATGTGGTATACATGTATGCAGGCAAAACACCCATGCACTGACTTTTAAGAAACCCTCTAGTCTGATTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| 3UTR GCA 90 bp | GTTTGTTGTTTGTTTGTAACTTCATGTGTTTGGTGTGCATATATGTaGACCACAGGGGTGCCTAATTTTGCCTGTAGAGGTCAGAAGAGA | + |
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Preference number: 1 (lower is better) Translates to: VCCLFVTSCVWCAYM*TTGVPNFACRGQKR Trigger: TCTCTTCTGACCTCTACAGGCAAAATTAGGCACCCCTGTGGTGCACATATATGCACACCAAACACATGAAGTTACAAACAAACAACAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| 3UTR-3UTR GCA 90 bp | AGTGTCTGCAGAGGCTCGAAGGCCCCAGATTCCCCAGGACTGGGTGTTACAGACTGTGCACCACAGGGGTaGCTAATTTTGCCTGTAGAG | + |
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Preference number: 2 (lower is better) Translates to: SVCRGSKAPDSPGLGVTDCAPQG*LILPVE Trigger: CTCTACAGGCAAAATTAGGCACCCCTGTGGTGCACA...GTCTGTAACACCCAGTCCTGGGGAATCTGGGGCCTTCGAGCCTCTGCAGACACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| 3UTR-3UTR GCA 90 bp | CATACATGTATACCACATCCATGCCTAGTGTCTGCAGAGGCTCGAAGGCCCCAGTGTGCACCACAGGGGTaGCTAATTTTGCCTGTAGAG | + |
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Preference number: 2 (lower is better) Translates to: HTCIPHPCLVSAEARRPQCAPQG*LILPVE Trigger: CTCTACAGGCAAAATTAGGCACCCCTGTGGTGCACA...CTGGGGCCTTCGAGCCTCTGCAGACACTAGGCATGGATGTGGTATACATGTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| 3UTR-3UTR GCA 90 bp | CATACATGTATACCACATCCATGCCTAGTGTCTGCAGAGGCTCGAAGGCCCCAGTTCATGTGTTTGGTGTaGATATATGTGCACCACAGG | + |
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Preference number: 2 (lower is better) Translates to: HTCIPHPCLVSAEARRPQFMCLV*IYVHHR Trigger: CCTGTGGTGCACATATATGCACACCAAACACATGAA...CTGGGGCCTTCGAGCCTCTGCAGACACTAGGCATGGATGTGGTATACATGTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| 3UTR CAA 90 bp | AGGAATCAGACTAGAGGGTTTCTTAAAAGTCAGTGCATGGGTGTTTaGCCTGCATACATGTATACCACATCCATGCCTAGTGTCTGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: RNQTRGFLKSQCMGV*PAYMYTTSMPSVCR Trigger: TCTGCAGACACTAGGCATGGATGTGGTATACATGTATGCAGGCAAAACACCCATGCACTGACTTTTAAGAAACCCTCTAGTCTGATTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| 3UTR GCA 72 bp | CCTGCATACATGTATACCACATCCATGCCTAGTGTCTaGAGAGGCTCGAAGGCCCCAGATTCCCCAGGACTG | + |
|
Preference number: 3 (lower is better) Translates to: PAYMYTTSMPSV*RGSKAPDSPGL Trigger: CAGTCCTGGGGAATCTGGGGCCTTCGAGCCTCTGCAGACACTAGGCATGGATGTGGTATACATGTATGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| 3UTR-3UTR CAA 90 bp | CATACATGTATACCACATCCATGCCTAGTGTCTGCAGAGGCTCGAAGGCCCCAGCAGGGGTGCCTAATTTaGCCTGTAGAGGTCAGAAGA | + |
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Preference number: 3 (lower is better) Translates to: HTCIPHPCLVSAEARRPQQGCLI*PVEVRR Trigger: TCTTCTGACCTCTACAGGCAAAATTAGGCACCCCTG...CTGGGGCCTTCGAGCCTCTGCAGACACTAGGCATGGATGTGGTATACATGTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| 3UTR-3UTR CAA 90 bp | ATACCACATCCATGCCTAGTGTCTGCAGAGGCTCGAAGGCCCCAGATTCCCCAGCATGTAGTGCTAGAATaGAGTTCTAGGTTCCTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: IPHPCLVSAEARRPQIPQHVVLE*SSRFLG Trigger: TCCCAGGAACCTAGAACTCAATTCTAGCACTACATG...CTGGGGAATCTGGGGCCTTCGAGCCTCTGCAGACACTAGGCATGGATGTGGTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| 3UTR GCA 72 bp | TGGGTGTTTTGCCTGCATACATGTATACCACATCCATaGCTAGTGTCTGCAGAGGCTCGAAGGCCCCAGATT | + |
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Preference number: 3 (lower is better) Translates to: WVFCLHTCIPHP*LVSAEARRPQI Trigger: AATCTGGGGCCTTCGAGCCTCTGCAGACACTAGGCATGGATGTGGTATACATGTATGCAGGCAAAACACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| 3UTR-3UTR CAA 90 bp | ATACCACATCCATGCCTAGTGTCTGCAGAGGCTCGAAGGCCCCAGATTCCCCAGGCACTATCTGTGTGTTaGTTGTTTGTTTGTAACTTC | + |
|
Preference number: 3 (lower is better) Translates to: IPHPCLVSAEARRPQIPQALSVC*LFVCNF Trigger: GAAGTTACAAACAAACAACAAACACACAGATAGTGC...CTGGGGAATCTGGGGCCTTCGAGCCTCTGCAGACACTAGGCATGGATGTGGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| 3UTR GCA 72 bp | CTAGAGGGTTTCTTAAAAGTCAGTGCATGGGTGTTTTaGCTGCATACATGTATACCACATCCATGCCTAGTG | + |
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Preference number: 3 (lower is better) Translates to: LEGFLKVSAWVF*LHTCIPHPCLV Trigger: CACTAGGCATGGATGTGGTATACATGTATGCAGGCAAAACACCCATGCACTGACTTTTAAGAAACCCTCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| 3UTR CCA 72 bp | GGAATCAGACTAGAGGGTTTCTTAAAAGTCAGTGCATaGGTGTTTTGCCTGCATACATGTATACCACATCCA | + |
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Preference number: 3 (lower is better) Translates to: GIRLEGFLKVSA*VFCLHTCIPHP Trigger: TGGATGTGGTATACATGTATGCAGGCAAAACACCCATGCACTGACTTTTAAGAAACCCTCTAGTCTGATTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| 3UTR-3UTR CAA 90 bp | AGGAATCAGACTAGAGGGTTTCTTAAAAGTCAGTGCATGGGTGTTTTGCCTGCATGTAACTTCATGTGTTaGGTGTGCATATATGTGCAC | + |
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Preference number: 3 (lower is better) Translates to: RNQTRGFLKSQCMGVLPACNFMC*VCIYVH Trigger: GTGCACATATATGCACACCAAACACATGAAGTTACA...TGCAGGCAAAACACCCATGCACTGACTTTTAAGAAACCCTCTAGTCTGATTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| 3UTR GCA 72 bp | GAAAGGAATCAGACTAGAGGGTTTCTTAAAAGTCAGTaGATGGGTGTTTTGCCTGCATACATGTATACCACA | + |
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Preference number: 3 (lower is better) Translates to: ERNQTRGFLKSQ*MGVLPAYMYTT Trigger: TGTGGTATACATGTATGCAGGCAAAACACCCATGCACTGACTTTTAAGAAACCCTCTAGTCTGATTCCTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| CDS-3UTR TCA 90 bp | AGTGTCTGCAGAGGCTCGAAGGCCCCAGATTCCCCAGGACTGGGTGTTACAGACAGGCAGAACCCTCCTTaGGTTGGCCCGGACCCAAGG | + |
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Preference number: 4 (lower is better) Translates to: SVCRGSKAPDSPGLGVTDRQNPP*VGPDPR Trigger: CCTTGGGTCCGGGCCAACTCAAGGAGGGTTCTGCCT...GTCTGTAACACCCAGTCCTGGGGAATCTGGGGCCTTCGAGCCTCTGCAGACACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| CDS-3UTR CCA 90 bp | CTAGTGTCTGCAGAGGCTCGAAGGCCCCAGATTCCCCAGGACTGGGTGTTACAGCTTCCTCCTCAGGGATaGGGCATGCACCGACCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LVSAEARRPQIPQDWVLQLPPQG*GMHRPA Trigger: GGCTGGTCGGTGCATGCCCCATCCCTGAGGAGGAAG...CTGTAACACCCAGTCCTGGGGAATCTGGGGCCTTCGAGCCTCTGCAGACACTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| CDS-3UTR CCA 90 bp | ATACCACATCCATGCCTAGTGTCTGCAGAGGCTCGAAGGCCCCAGATTCCCCAGCTTCCTCCTCAGGGATaGGGCATGCACCGACCAGCC | + |
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Preference number: 4 (lower is better) Translates to: IPHPCLVSAEARRPQIPQLPPQG*GMHRPA Trigger: GGCTGGTCGGTGCATGCCCCATCCCTGAGGAGGAAG...CTGGGGAATCTGGGGCCTTCGAGCCTCTGCAGACACTAGGCATGGATGTGGTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| CDS-3UTR CCA 90 bp | AGTGTCTGCAGAGGCTCGAAGGCCCCAGATTCCCCAGGACTGGGTGTTACAGACGAACCCTCCTTGAGTTaGCCCGGACCCAAGGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: SVCRGSKAPDSPGLGVTDEPSLS*PGPKGE Trigger: CTCACCCTTGGGTCCGGGCCAACTCAAGGAGGGTTC...GTCTGTAACACCCAGTCCTGGGGAATCTGGGGCCTTCGAGCCTCTGCAGACACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| CDS-3UTR TCA 90 bp | CTAGTGTCTGCAGAGGCTCGAAGGCCCCAGATTCCCCAGGACTGGGTGTTACAGGAGGCAGTGGAGCCCTaGCTCTTGTTCTCAGCCAAC | + |
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Preference number: 4 (lower is better) Translates to: LVSAEARRPQIPQDWVLQEAVEP*LLFSAN Trigger: GTTGGCTGAGAACAAGAGTCAGGGCTCCACTGCCTC...CTGTAACACCCAGTCCTGGGGAATCTGGGGCCTTCGAGCCTCTGCAGACACTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| CDS-3UTR TCA 90 bp | TCAGATCCCCTAGAACTGGAGCTAGGAATAGTTTCCAGTTCCCACCCCTTCTCAGCCCGGACCCAAGGGTaGGCTGCAACCTCCGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: SDPLELELGIVSSSHPFSARTQG*AATSAR Trigger: CCTGGCGGAGGTTGCAGCTCACCCTTGGGTCCGGGC...TGAGAAGGGGTGGGAACTGGAAACTATTCCTAGCTCCAGTTCTAGGGGATCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| CDS-3UTR CCA 90 bp | AGTGTCTGCAGAGGCTCGAAGGCCCCAGATTCCCCAGGACTGGGTGTTACAGACTTGGAGATGAGGTCCTaGGCGCCCGAAGGCACAGAA | + |
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Preference number: 4 (lower is better) Translates to: SVCRGSKAPDSPGLGVTDLEMRS*APEGTE Trigger: TTCTGTGCCTTCGGGCGCCCAGGACCTCATCTCCAA...GTCTGTAACACCCAGTCCTGGGGAATCTGGGGCCTTCGAGCCTCTGCAGACACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| CDS-3UTR CCA 90 bp | CTAGTGTCTGCAGAGGCTCGAAGGCCCCAGATTCCCCAGGACTGGGTGTTACAGTTGGAGATGAGGTCCTaGGCGCCCGAAGGCACAGAA | + |
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Preference number: 4 (lower is better) Translates to: LVSAEARRPQIPQDWVLQLEMRS*APEGTE Trigger: TTCTGTGCCTTCGGGCGCCCAGGACCTCATCTCCAA...CTGTAACACCCAGTCCTGGGGAATCTGGGGCCTTCGAGCCTCTGCAGACACTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| CDS-3UTR TCA 90 bp | ATACCACATCCATGCCTAGTGTCTGCAGAGGCTCGAAGGCCCCAGATTCCCCAGAGACTGAGACGTCTTTaGGCCGTAGGGCCACGGGTA | + |
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Preference number: 4 (lower is better) Translates to: IPHPCLVSAEARRPQIPQRLRRL*AVGPRV Trigger: TACCCGTGGCCCTACGGCTCAAAGACGTCTCAGTCT...CTGGGGAATCTGGGGCCTTCGAGCCTCTGCAGACACTAGGCATGGATGTGGTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| CDS-3UTR CCA 90 bp | ATACCACATCCATGCCTAGTGTCTGCAGAGGCTCGAAGGCCCCAGATTCCCCAGTTCTCAGCCAACTTCTaGCCAGGGGCAGCTGTGGAC | + |
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Preference number: 4 (lower is better) Translates to: IPHPCLVSAEARRPQIPQFSANF*PGAAVD Trigger: GTCCACAGCTGCCCCTGGCCAGAAGTTGGCTGAGAA...CTGGGGAATCTGGGGCCTTCGAGCCTCTGCAGACACTAGGCATGGATGTGGTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| CDS-3UTR CCA 90 bp | ATACCACATCCATGCCTAGTGTCTGCAGAGGCTCGAAGGCCCCAGATTCCCCAGAGGGCTCTCGAAGGGTaGGTTCCCCACCATCAGTTC | + |
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Preference number: 4 (lower is better) Translates to: IPHPCLVSAEARRPQIPQRALEG*VPHHQF Trigger: GAACTGATGGTGGGGAACCCACCCTTCGAGAGCCCT...CTGGGGAATCTGGGGCCTTCGAGCCTCTGCAGACACTAGGCATGGATGTGGTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| CDS-3UTR TCA 90 bp | CATACATGTATACCACATCCATGCCTAGTGTCTGCAGAGGCTCGAAGGCCCCAGAGACTGAGACGTCTTTaGGCCGTAGGGCCACGGGTA | + |
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Preference number: 4 (lower is better) Translates to: HTCIPHPCLVSAEARRPQRLRRL*AVGPRV Trigger: TACCCGTGGCCCTACGGCTCAAAGACGTCTCAGTCT...CTGGGGCCTTCGAGCCTCTGCAGACACTAGGCATGGATGTGGTATACATGTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| CDS-3UTR TCA 90 bp | CATACATGTATACCACATCCATGCCTAGTGTCTGCAGAGGCTCGAAGGCCCCAGGAGGCAGTGGAGCCCTaGCTCTTGTTCTCAGCCAAC | + |
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Preference number: 4 (lower is better) Translates to: HTCIPHPCLVSAEARRPQEAVEP*LLFSAN Trigger: GTTGGCTGAGAACAAGAGTCAGGGCTCCACTGCCTC...CTGGGGCCTTCGAGCCTCTGCAGACACTAGGCATGGATGTGGTATACATGTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| CDS-3UTR TCA 90 bp | GAGGTCAGAAGAGAGATCAGATCCCCTAGAACTGGAGCTAGGAATAGTTTCCAGAGGCAGAACCCTCCTTaGGTTGGCCCGGACCCAAGG | + |
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Preference number: 4 (lower is better) Translates to: EVRREIRSPRTGARNSFQRQNPP*VGPDPR Trigger: CCTTGGGTCCGGGCCAACTCAAGGAGGGTTCTGCCT...CTGGAAACTATTCCTAGCTCCAGTTCTAGGGGATCTGATCTCTCTTCTGACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| CDS-3UTR CCA 90 bp | AGTGTCTGCAGAGGCTCGAAGGCCCCAGATTCCCCAGGACTGGGTGTTACAGACAGAGTTGAAGGATGTTaGGATGTTTCAGGTGCGCCT | + |
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Preference number: 4 (lower is better) Translates to: SVCRGSKAPDSPGLGVTDRVEGC*DVSGAP Trigger: AGGCGCACCTGAAACATCCCAACATCCTTCAACTCT...GTCTGTAACACCCAGTCCTGGGGAATCTGGGGCCTTCGAGCCTCTGCAGACACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| CDS-3UTR CCA 90 bp | CTAGTGTCTGCAGAGGCTCGAAGGCCCCAGATTCCCCAGGACTGGGTGTTACAGAGAGTTGAAGGATGTTaGGATGTTTCAGGTGCGCCT | + |
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Preference number: 4 (lower is better) Translates to: LVSAEARRPQIPQDWVLQRVEGC*DVSGAP Trigger: AGGCGCACCTGAAACATCCCAACATCCTTCAACTCT...CTGTAACACCCAGTCCTGGGGAATCTGGGGCCTTCGAGCCTCTGCAGACACTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| CDS-3UTR GCA 90 bp | CTAGTGTCTGCAGAGGCTCGAAGGCCCCAGATTCCCCAGGACTGGGTGTTACAGTTCCAAATTTGCCTTTaGCCAAAGGACGCCCAATCT | + |
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Preference number: 4 (lower is better) Translates to: LVSAEARRPQIPQDWVLQFQICL*PKDAQS Trigger: AGATTGGGCGTCCTTTGGGCAAAGGCAAATTTGGAA...CTGTAACACCCAGTCCTGGGGAATCTGGGGCCTTCGAGCCTCTGCAGACACTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| CDS-3UTR GCA 90 bp | ATACCACATCCATGCCTAGTGTCTGCAGAGGCTCGAAGGCCCCAGATTCCCCAGACACGTTTCCAAATTTaGCTTTGCCCAAAGGACGCC | + |
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Preference number: 4 (lower is better) Translates to: IPHPCLVSAEARRPQIPQTRFQI*LCPKDA Trigger: GGCGTCCTTTGGGCAAAGGCAAATTTGGAAACGTGT...CTGGGGAATCTGGGGCCTTCGAGCCTCTGCAGACACTAGGCATGGATGTGGTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| CDS-3UTR GCA 90 bp | ATACCACATCCATGCCTAGTGTCTGCAGAGGCTCGAAGGCCCCAGATTCCCCAGCCATTTCATTATGCATaGGCCCCTCAATCATCTCTG | + |
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Preference number: 4 (lower is better) Translates to: IPHPCLVSAEARRPQIPQPFHYA*APQSSL Trigger: CAGAGATGATTGAGGGGCGCATGCATAATGAAATGG...CTGGGGAATCTGGGGCCTTCGAGCCTCTGCAGACACTAGGCATGGATGTGGTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| CDS-3UTR GCA 90 bp | AGTGTCTGCAGAGGCTCGAAGGCCCCAGATTCCCCAGGACTGGGTGTTACAGACTCTACCATTTCATTATaGATGCGCCCCTCAATCATC | + |
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Preference number: 4 (lower is better) Translates to: SVCRGSKAPDSPGLGVTDSTISL*MRPSII Trigger: GATGATTGAGGGGCGCATGCATAATGAAATGGTAGA...GTCTGTAACACCCAGTCCTGGGGAATCTGGGGCCTTCGAGCCTCTGCAGACACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| CDS-3UTR CCA 90 bp | TACATGTATACCACATCCATGCCTAGTGTCTGCAGAGGCTCGAAGGCCCCAGATTGTTTCAGGTGCGCCTaGATTTCGATCTCTCGGCGA | + |
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Preference number: 4 (lower is better) Translates to: YMYTTSMPSVCRGSKAPDCFRCA*ISISRR Trigger: TCGCCGAGAGATCGAAATCCAGGCGCACCTGAAACA...ATCTGGGGCCTTCGAGCCTCTGCAGACACTAGGCATGGATGTGGTATACATGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| CDS-3UTR CCA 90 bp | GAGGTCAGAAGAGAGATCAGATCCCCTAGAACTGGAGCTAGGAATAGTTTCCAGAGGGCTCTCGAAGGGTaGGTTCCCCACCATCAGTTC | + |
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Preference number: 4 (lower is better) Translates to: EVRREIRSPRTGARNSFQRALEG*VPHHQF Trigger: GAACTGATGGTGGGGAACCCACCCTTCGAGAGCCCT...CTGGAAACTATTCCTAGCTCCAGTTCTAGGGGATCTGATCTCTCTTCTGACCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| CDS-3UTR CCA 90 bp | AGGAATCAGACTAGAGGGTTTCTTAAAAGTCAGTGCATGGGTGTTTTGCCTGCAGAACCCTCCTTGAGTTaGCCCGGACCCAAGGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: RNQTRGFLKSQCMGVLPAEPSLS*PGPKGE Trigger: CTCACCCTTGGGTCCGGGCCAACTCAAGGAGGGTTC...TGCAGGCAAAACACCCATGCACTGACTTTTAAGAAACCCTCTAGTCTGATTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| CDS-3UTR GCA 90 bp | TACATGTATACCACATCCATGCCTAGTGTCTGCAGAGGCTCGAAGGCCCCAGATTTGGGATGTTTCAGGTaGGCCTGGATTTCGATCTCT | + |
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Preference number: 4 (lower is better) Translates to: YMYTTSMPSVCRGSKAPDLGCFR*AWISIS Trigger: AGAGATCGAAATCCAGGCGCACCTGAAACATCCCAA...ATCTGGGGCCTTCGAGCCTCTGCAGACACTAGGCATGGATGTGGTATACATGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| CDS-3UTR GCA 90 bp | AGAGAGATCAGATCCCCTAGAACTGGAGCTAGGAATAGTTTCCAGTTCCCACCCCGACCAGCCAAAGTCTaGAATCTTCAGTTCTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: REIRSPRTGARNSFQFPPRPAKV*NLQFSL Trigger: CAGGGAGAACTGAAGATTGCAGACTTTGGCTGGTCG...GGGTGGGAACTGGAAACTATTCCTAGCTCCAGTTCTAGGGGATCTGATCTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| 3UTR CAA 72 bp | GGTGTGCATATATGTGCACCACAGGGGTGCCTAATTTaGCCTGTAGAGGTCAGAAGAGAGATCAGATCCCCT | + |
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Preference number: 4 (lower is better) Translates to: GVHICAPQGCLI*PVEVRREIRSP Trigger: AGGGGATCTGATCTCTCTTCTGACCTCTACAGGCAAAATTAGGCACCCCTGTGGTGCACATATATGCACACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| CDS-3UTR GCA 90 bp | TACATGTATACCACATCCATGCCTAGTGTCTGCAGAGGCTCGAAGGCCCCAGATTTCCAAATTTGCCTTTaGCCAAAGGACGCCCAATCT | + |
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Preference number: 4 (lower is better) Translates to: YMYTTSMPSVCRGSKAPDFQICL*PKDAQS Trigger: AGATTGGGCGTCCTTTGGGCAAAGGCAAATTTGGAA...ATCTGGGGCCTTCGAGCCTCTGCAGACACTAGGCATGGATGTGGTATACATGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| CDS-3UTR GCA 90 bp | AGAGAGATCAGATCCCCTAGAACTGGAGCTAGGAATAGTTTCCAGTTCCCACCCTTGGGATGTTTCAGGTaGGCCTGGATTTCGATCTCT | + |
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Preference number: 4 (lower is better) Translates to: REIRSPRTGARNSFQFPPLGCFR*AWISIS Trigger: AGAGATCGAAATCCAGGCGCACCTGAAACATCCCAA...GGGTGGGAACTGGAAACTATTCCTAGCTCCAGTTCTAGGGGATCTGATCTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| CDS-3UTR GCA 90 bp | TCAGATCCCCTAGAACTGGAGCTAGGAATAGTTTCCAGTTCCCACCCCTTCTCAATCTTCAGTTCTCCCTaGAGACCTAACAGCAGGTTC | + |
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Preference number: 4 (lower is better) Translates to: SDPLELELGIVSSSHPFSIFSSP*RPNSRF Trigger: GAACCTGCTGTTAGGTCTGCAGGGAGAACTGAAGAT...TGAGAAGGGGTGGGAACTGGAAACTATTCCTAGCTCCAGTTCTAGGGGATCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| CDS-3UTR GCA 90 bp | GAGGTCAGAAGAGAGATCAGATCCCCTAGAACTGGAGCTAGGAATAGTTTCCAGCGACCAGCCAAAGTCTaGAATCTTCAGTTCTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: EVRREIRSPRTGARNSFQRPAKV*NLQFSL Trigger: CAGGGAGAACTGAAGATTGCAGACTTTGGCTGGTCG...CTGGAAACTATTCCTAGCTCCAGTTCTAGGGGATCTGATCTCTCTTCTGACCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| CDS-3UTR GCA 90 bp | TCAGATCCCCTAGAACTGGAGCTAGGAATAGTTTCCAGTTCCCACCCCTTCTCACCATTTCATTATGCATaGGCCCCTCAATCATCTCTG | + |
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Preference number: 4 (lower is better) Translates to: SDPLELELGIVSSSHPFSPFHYA*APQSSL Trigger: CAGAGATGATTGAGGGGCGCATGCATAATGAAATGG...TGAGAAGGGGTGGGAACTGGAAACTATTCCTAGCTCCAGTTCTAGGGGATCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| CDS-3UTR CCA 90 bp | AGGAATCAGACTAGAGGGTTTCTTAAAAGTCAGTGCATGGGTGTTTTGCCTGCATGTTTCAGGTGCGCCTaGATTTCGATCTCTCGGCGA | + |
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Preference number: 4 (lower is better) Translates to: RNQTRGFLKSQCMGVLPACFRCA*ISISRR Trigger: TCGCCGAGAGATCGAAATCCAGGCGCACCTGAAACA...TGCAGGCAAAACACCCATGCACTGACTTTTAAGAAACCCTCTAGTCTGATTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| CDS-3UTR GCA 90 bp | AGGAATCAGACTAGAGGGTTTCTTAAAAGTCAGTGCATGGGTGTTTTGCCTGCAATCTTCAGTTCTCCCTaGAGACCTAACAGCAGGTTC | + |
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Preference number: 4 (lower is better) Translates to: RNQTRGFLKSQCMGVLPAIFSSP*RPNSRF Trigger: GAACCTGCTGTTAGGTCTGCAGGGAGAACTGAAGAT...TGCAGGCAAAACACCCATGCACTGACTTTTAAGAAACCCTCTAGTCTGATTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| CDS-3UTR GCA 90 bp | GAGGTCAGAAGAGAGATCAGATCCCCTAGAACTGGAGCTAGGAATAGTTTCCAGTCTACCATTTCATTATaGATGCGCCCCTCAATCATC | + |
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Preference number: 4 (lower is better) Translates to: EVRREIRSPRTGARNSFQSTISL*MRPSII Trigger: GATGATTGAGGGGCGCATGCATAATGAAATGGTAGA...CTGGAAACTATTCCTAGCTCCAGTTCTAGGGGATCTGATCTCTCTTCTGACCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| 3UTR CAA 72 bp | ACTAGAGGGTTTCTTAAAAGTCAGTGCATGGGTGTTTaGCCTGCATACATGTATACCACATCCATGCCTAGT | + |
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Preference number: 4 (lower is better) Translates to: TRGFLKSQCMGV*PAYMYTTSMPS Trigger: ACTAGGCATGGATGTGGTATACATGTATGCAGGCAAAACACCCATGCACTGACTTTTAAGAAACCCTCTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| 3UTR CAA 72 bp | GAGCCATCTCTCCAGCACTATCTGTGTGTTTGTTGTTaGTTTGTAACTTCATGTGTTTGGTGTGCATATATG | + |
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Preference number: 4 (lower is better) Translates to: EPSLQHYLCVCC*FVTSCVWCAYM Trigger: CATATATGCACACCAAACACATGAAGTTACAAACAAACAACAAACACACAGATAGTGCTGGAGAGATGGCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| CDS-3UTR CAA 90 bp | ATACCACATCCATGCCTAGTGTCTGCAGAGGCTCGAAGGCCCCAGATTCCCCAGCTTGTTCTGGGATCCTaGCGAGGCAGTGGAGCCCTG | + |
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Preference number: 5 (lower is better) Translates to: IPHPCLVSAEARRPQIPQLVLGS*RGSGAL Trigger: CAGGGCTCCACTGCCTCGCAAGGATCCCAGAACAAG...CTGGGGAATCTGGGGCCTTCGAGCCTCTGCAGACACTAGGCATGGATGTGGTAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| CDS TCA 90 bp | CCTTCTTCTTGTGGCAGTAGGTCAGGGCATCTGACAGTTCCTCCATaGTCGTGGCAGTCCGCTGCTCATCGAAGGTCCGACTCTTCTGCA | + |
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Preference number: 5 (lower is better) Translates to: PSSCGSRSGHLTVPP*SWQSAAHRRSDSSA Trigger: TGCAGAAGAGTCGGACCTTCGATGAGCAGCGGACTGCCACGATCATGGAGGAACTGTCAGATGCCCTGACCTACTGCCACAAGAAGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| CDS-3UTR CAA 90 bp | TCAGATCCCCTAGAACTGGAGCTAGGAATAGTTTCCAGTTCCCACCCCTTCTCAGAGGCAGAACCCTCCTaGAGTTGGCCCGGACCCAAG | + |
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Preference number: 5 (lower is better) Translates to: SDPLELELGIVSSSHPFSEAEPS*SWPGPK Trigger: CTTGGGTCCGGGCCAACTCAAGGAGGGTTCTGCCTC...TGAGAAGGGGTGGGAACTGGAAACTATTCCTAGCTCCAGTTCTAGGGGATCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| CDS-3UTR CAA 90 bp | CTAGTGTCTGCAGAGGCTCGAAGGCCCCAGATTCCCCAGGACTGGGTGTTACAGTTTCCAAATTTGCCTTaGCCCAAAGGACGCCCAATC | + |
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Preference number: 5 (lower is better) Translates to: LVSAEARRPQIPQDWVLQFPNLP*PKGRPI Trigger: GATTGGGCGTCCTTTGGGCAAAGGCAAATTTGGAAA...CTGTAACACCCAGTCCTGGGGAATCTGGGGCCTTCGAGCCTCTGCAGACACTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| CDS-3UTR CAA 90 bp | AGTGTCTGCAGAGGCTCGAAGGCCCCAGATTCCCCAGGACTGGGTGTTACAGACTACACGTTTCCAAATTaGCCTTTGCCCAAAGGACGC | + |
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Preference number: 5 (lower is better) Translates to: SVCRGSKAPDSPGLGVTDYTFPN*PLPKGR Trigger: GCGTCCTTTGGGCAAAGGCAAATTTGGAAACGTGTA...GTCTGTAACACCCAGTCCTGGGGAATCTGGGGCCTTCGAGCCTCTGCAGACACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| CDS-3UTR CAA 90 bp | AGGAATCAGACTAGAGGGTTTCTTAAAAGTCAGTGCATGGGTGTTTTGCCTGCACTTGTTCTGGGATCCTaGCGAGGCAGTGGAGCCCTG | + |
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Preference number: 5 (lower is better) Translates to: RNQTRGFLKSQCMGVLPALVLGS*RGSGAL Trigger: CAGGGCTCCACTGCCTCGCAAGGATCCCAGAACAAG...TGCAGGCAAAACACCCATGCACTGACTTTTAAGAAACCCTCTAGTCTGATTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| CDS-3UTR CAA 90 bp | CATACATGTATACCACATCCATGCCTAGTGTCTGCAGAGGCTCGAAGGCCCCAGTTTCCAAATTTGCCTTaGCCCAAAGGACGCCCAATC | + |
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Preference number: 5 (lower is better) Translates to: HTCIPHPCLVSAEARRPQFPNLP*PKGRPI Trigger: GATTGGGCGTCCTTTGGGCAAAGGCAAATTTGGAAA...CTGGGGCCTTCGAGCCTCTGCAGACACTAGGCATGGATGTGGTATACATGTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| CDS-3UTR CAA 90 bp | CTAGTGTCTGCAGAGGCTCGAAGGCCCCAGATTCCCCAGGACTGGGTGTTACAGGAAGTAGTTGTAGAGTaGAAGGATGTTGGGATGTTT | + |
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Preference number: 5 (lower is better) Translates to: LVSAEARRPQIPQDWVLQEVVVE*KDVGMF Trigger: AAACATCCCAACATCCTTCAACTCTACAACTACTTC...CTGTAACACCCAGTCCTGGGGAATCTGGGGCCTTCGAGCCTCTGCAGACACTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| CDS-3UTR CAA 90 bp | TCAGATCCCCTAGAACTGGAGCTAGGAATAGTTTCCAGTTCCCACCCCTTCTCAATAGTGAAAGGCTGCTaGTTCTGGGATCCTTGCGAG | + |
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Preference number: 5 (lower is better) Translates to: SDPLELELGIVSSSHPFSIVKGC*FWDPCE Trigger: CTCGCAAGGATCCCAGAACAAGCAGCCTTTCACTAT...TGAGAAGGGGTGGGAACTGGAAACTATTCCTAGCTCCAGTTCTAGGGGATCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| CDS-3UTR CAA 90 bp | AGAGAGATCAGATCCCCTAGAACTGGAGCTAGGAATAGTTTCCAGTTCCCACCCGAAGTAGTTGTAGAGTaGAAGGATGTTGGGATGTTT | + |
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Preference number: 5 (lower is better) Translates to: REIRSPRTGARNSFQFPPEVVVE*KDVGMF Trigger: AAACATCCCAACATCCTTCAACTCTACAACTACTTC...GGGTGGGAACTGGAAACTATTCCTAGCTCCAGTTCTAGGGGATCTGATCTCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| CDS TCA 72 bp | TGTGGCAGTAGGTCAGGGCATCTGACAGTTCCTCCATaGTCGTGGCAGTCCGCTGCTCATCGAAGGTCCGAC | + |
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Preference number: 6 (lower is better) Translates to: CGSRSGHLTVPP*SWQSAAHRRSD Trigger: GTCGGACCTTCGATGAGCAGCGGACTGCCACGATCATGGAGGAACTGTCAGATGCCCTGACCTACTGCCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| CDS CCA 72 bp | TTCTCAGCCAACTTCTGGCCAGGGGCAGCTGTGGACTaGCTGTTGAACCGGTTCACGAGAGCAAGCGCAGAT | + |
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Preference number: 6 (lower is better) Translates to: FSANFWPGAAVD*LLNRFTRASAD Trigger: ATCTGCGCTTGCTCTCGTGAACCGGTTCAACAGCCAGTCCACAGCTGCCCCTGGCCAGAAGTTGGCTGAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| CDS CCA 72 bp | AGGTCCACCTTGACAATCCGACGATACGTCTCACTGTaGCTAGGGCTCTCGAAGGGTGGGTTCCCCACCATC | + |
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Preference number: 6 (lower is better) Translates to: RSTLTIRRYVSL*LGLSKGGFPTI Trigger: GATGGTGGGGAACCCACCCTTCGAGAGCCCTAGCCACAGTGAGACGTATCGTCGGATTGTCAAGGTGGACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| CDS CAA 72 bp | TCTGGGACAACGTGTTCAGGCCAGACTGAGACGTCTTaGAGCCGTAGGGCCACGGGTAGGCGTTCTCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: SGTTCSGQTETS*SRRATGRRSPS Trigger: AGAAGGAGAACGCCTACCCGTGGCCCTACGGCTCAAAGACGTCTCAGTCTGGCCTGAACACGTTGTCCCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| CDS GCA 72 bp | GCATCTGACAGTTCCTCCATGATCGTGGCAGTCCGCTaGTCATCGAAGGTCCGACTCTTCTGCAGTTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: ASDSSSMIVAVR*SSKVRLFCSSL Trigger: CAAGGAACTGCAGAAGAGTCGGACCTTCGATGAGCAGCGGACTGCCACGATCATGGAGGAACTGTCAGATGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| CDS GCA 72 bp | GGACGCCCAATCTCAAAGTTGTCAATAGTGAAAGGCTaGTTGTTCTGGGATCCTTGCGAGGCAGTGGAGCCC | + |
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Preference number: 6 (lower is better) Translates to: GRPISKLSIVKG*LFWDPCEAVEP Trigger: GGGCTCCACTGCCTCGCAAGGATCCCAGAACAAGCAGCCTTTCACTATTGACAACTTTGAGATTGGGCGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| CDS CAA 72 bp | GTTGTCAATAGTGAAAGGCTGCTTGTTCTGGGATCCTaGCGAGGCAGTGGAGCCCTGACTCTTGTTCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: VVNSERLLVLGS*RGSGALTLVLS Trigger: GCTGAGAACAAGAGTCAGGGCTCCACTGCCTCGCAAGGATCCCAGAACAAGCAGCCTTTCACTATTGACAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| CDS CAA 90 bp | AATCTCAAAGTTGTCAATAGTGAAAGGCTGCTTGTTCTGGGATCCTaGCGAGGCAGTGGAGCCCTGACTCTTGTTCTCAGCCAACTTCTG | + |
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Preference number: 6 (lower is better) Translates to: NLKVVNSERLLVLGS*RGSGALTLVLSQLL Trigger: CAGAAGTTGGCTGAGAACAAGAGTCAGGGCTCCACTGCCTCGCAAGGATCCCAGAACAAGCAGCCTTTCACTATTGACAACTTTGAGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| CDS CAA 90 bp | ACGTTTCCAAATTTGCCTTTGCCCAAAGGACGCCCAATCTCAAAGTaGTCAATAGTGAAAGGCTGCTTGTTCTGGGATCCTTGCGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: TFPNLPLPKGRPISK*SIVKGCLFWDPCEA Trigger: TGCCTCGCAAGGATCCCAGAACAAGCAGCCTTTCACTATTGACAACTTTGAGATTGGGCGTCCTTTGGGCAAAGGCAAATTTGGAAACGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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| CDS CAA 72 bp | AATTTGCCTTTGCCCAAAGGACGCCCAATCTCAAAGTaGTCAATAGTGAAAGGCTGCTTGTTCTGGGATCCT | + |
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Preference number: 6 (lower is better) Translates to: NLPLPKGRPISK*SIVKGCLFWDP Trigger: AGGATCCCAGAACAAGCAGCCTTTCACTATTGACAACTTTGAGATTGGGCGTCCTTTGGGCAAAGGCAAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021277.6 ENSMUST00000108666.8 |
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