Pregenerated sensors for AURKAIP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000065990Ensembl transcript IDs: ENSMUST00000084097.12, ENSMUST00000105591.2, ENSMUST00000105592.8, ENSMUST00000139651.8
Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS-3UTR CCA 90 bp | CTTCCAATATTTATTATAGTGGGTCAGAAGCAGCAAGAGAGCCAGAGGGACAGGGGAGGCAGCCCGACTTaGGCTTGCAGGCTGCAAACT | + |
Preference number: 4 (lower is better) Translates to: LPIFIIVGQKQQESQRDRGGSPT*ACRLQT Trigger: AGTTTGCAGCCTGCAAGCCCAAGTCGGGCTGCCTCC...CCTGTCCCTCTGGCTCTCTTGCTGCTTCTGACCCACTATAATAAATATTGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084097.12 ENSMUST00000105592.8 |
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CDS-3UTR TCA 90 bp | CTTCCAATATTTATTATAGTGGGTCAGAAGCAGCAAGAGAGCCAGAGGGACAGGGAACTCCTCAAGCTCTaGCTGGGTCCTCTTACCAGG | + |
Preference number: 4 (lower is better) Translates to: LPIFIIVGQKQQESQRDRELLKL*LGPLTR Trigger: CCTGGTAAGAGGACCCAGTCAGAGCTTGAGGAGTTC...CCTGTCCCTCTGGCTCTCTTGCTGCTTCTGACCCACTATAATAAATATTGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084097.12 ENSMUST00000105592.8 |
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CDS-3UTR TCA 90 bp | CCTTCCAATATTTATTATAGTGGGTCAGAAGCAGCAAGAGAGCCAGAGGGACAGGAACTCCTCAAGCTCTaGCTGGGTCCTCTTACCAGG | + |
Preference number: 4 (lower is better) Translates to: PSNIYYSGSEAAREPEGQELLKL*LGPLTR Trigger: CCTGGTAAGAGGACCCAGTCAGAGCTTGAGGAGTTC...CTGTCCCTCTGGCTCTCTTGCTGCTTCTGACCCACTATAATAAATATTGGAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084097.12 ENSMUST00000105592.8 |
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CDS-3UTR TCA 90 bp | CTTCCAATATTTATTATAGTGGGTCAGAAGCAGCAAGAGAGCCAGAGGGACAGGAGCTCTCTAGAGGACTaGTGGCCATCTTCCTGGGGA | + |
Preference number: 4 (lower is better) Translates to: LPIFIIVGQKQQESQRDRSSLED*WPSSWG Trigger: TCCCCAGGAAGATGGCCATCAGTCCTCTAGAGAGCT...CCTGTCCCTCTGGCTCTCTTGCTGCTTCTGACCCACTATAATAAATATTGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084097.12 ENSMUST00000105592.8 |
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CDS-3UTR GCA 90 bp | CTTCCAATATTTATTATAGTGGGTCAGAAGCAGCAAGAGAGCCAGAGGGACAGGGGCTTCCTTCAGGCCTaGCTTAAGCCAGATGCGCTT | + |
Preference number: 4 (lower is better) Translates to: LPIFIIVGQKQQESQRDRGFLQA*LKPDAL Trigger: AAGCGCATCTGGCTTAAGGCAGGCCTGAAGGAAGCC...CCTGTCCCTCTGGCTCTCTTGCTGCTTCTGACCCACTATAATAAATATTGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084097.12 ENSMUST00000105592.8 |
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CDS-3UTR CCA 90 bp | TTGAGTCCTTCCAATATTTATTATAGTGGGTCAGAAGCAGCAAGAGAGCCAGAGGGAGGCAGCCCGACTTaGGCTTGCAGGCTGCAAACT | + |
Preference number: 4 (lower is better) Translates to: LSPSNIYYSGSEAAREPEGGSPT*ACRLQT Trigger: AGTTTGCAGCCTGCAAGCCCAAGTCGGGCTGCCTCC...CTCTGGCTCTCTTGCTGCTTCTGACCCACTATAATAAATATTGGAAGGACTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084097.12 ENSMUST00000105592.8 |
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CDS-3UTR CCA 90 bp | CTTCCAATATTTATTATAGTGGGTCAGAAGCAGCAAGAGAGCCAGAGGGACAGGTCCTCAAGCTCTGACTaGGTCCTCTTACCAGGGAGG | + |
Preference number: 4 (lower is better) Translates to: LPIFIIVGQKQQESQRDRSSSSD*VLLPGR Trigger: CCTCCCTGGTAAGAGGACCCAGTCAGAGCTTGAGGA...CCTGTCCCTCTGGCTCTCTTGCTGCTTCTGACCCACTATAATAAATATTGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084097.12 ENSMUST00000105592.8 |
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CDS-3UTR TCA 90 bp | AGTCCTTCCAATATTTATTATAGTGGGTCAGAAGCAGCAAGAGAGCCAGAGGGAAGCTCTCTAGAGGACTaGTGGCCATCTTCCTGGGGA | + |
Preference number: 4 (lower is better) Translates to: SPSNIYYSGSEAAREPEGSSLED*WPSSWG Trigger: TCCCCAGGAAGATGGCCATCAGTCCTCTAGAGAGCT...TCCCTCTGGCTCTCTTGCTGCTTCTGACCCACTATAATAAATATTGGAAGGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084097.12 ENSMUST00000105592.8 |
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CDS-3UTR GCA 90 bp | CTTCCAATATTTATTATAGTGGGTCAGAAGCAGCAAGAGAGCCAGAGGGACAGGAGCCCGACTTGGGCTTaGAGGCTGCAAACTGTAAAG | + |
Preference number: 4 (lower is better) Translates to: LPIFIIVGQKQQESQRDRSPTWA*RLQTVK Trigger: CTTTACAGTTTGCAGCCTGCAAGCCCAAGTCGGGCT...CCTGTCCCTCTGGCTCTCTTGCTGCTTCTGACCCACTATAATAAATATTGGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084097.12 ENSMUST00000105592.8 |
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CDS-3UTR GCA 90 bp | AGTCCTTCCAATATTTATTATAGTGGGTCAGAAGCAGCAAGAGAGCCAGAGGGAGGCTTCCTTCAGGCCTaGCTTAAGCCAGATGCGCTT | + |
Preference number: 4 (lower is better) Translates to: SPSNIYYSGSEAAREPEGGFLQA*LKPDAL Trigger: AAGCGCATCTGGCTTAAGGCAGGCCTGAAGGAAGCC...TCCCTCTGGCTCTCTTGCTGCTTCTGACCCACTATAATAAATATTGGAAGGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084097.12 ENSMUST00000105592.8 |
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CDS-3UTR CCA 90 bp | AGTCCTTCCAATATTTATTATAGTGGGTCAGAAGCAGCAAGAGAGCCAGAGGGATCCTCAAGCTCTGACTaGGTCCTCTTACCAGGGAGG | + |
Preference number: 4 (lower is better) Translates to: SPSNIYYSGSEAAREPEGSSSSD*VLLPGR Trigger: CCTCCCTGGTAAGAGGACCCAGTCAGAGCTTGAGGA...TCCCTCTGGCTCTCTTGCTGCTTCTGACCCACTATAATAAATATTGGAAGGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084097.12 ENSMUST00000105592.8 |
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CDS-3UTR CCA 90 bp | CTTCCAATATTTATTATAGTGGGTCAGAAGCAGCAAGAGAGCCAGAGGGACAGGGTTTTTGCACTGCACTaGAGTGGCATCCCAGGCTTC | + |
Preference number: 4 (lower is better) Translates to: LPIFIIVGQKQQESQRDRVFALH*SGIPGF Trigger: GAAGCCTGGGATGCCACTCCAGTGCAGTGCAAAAAC...CCTGTCCCTCTGGCTCTCTTGCTGCTTCTGACCCACTATAATAAATATTGGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084097.12 ENSMUST00000105592.8 |
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CDS-3UTR GCA 90 bp | AGTCCTTCCAATATTTATTATAGTGGGTCAGAAGCAGCAAGAGAGCCAGAGGGAGGAACGACTGAAACCTaGCCAGGGAACAACAGTCCT | + |
Preference number: 4 (lower is better) Translates to: SPSNIYYSGSEAAREPEGGTTET*PGNNSP Trigger: AGGACTGTTGTTCCCTGGGCAGGTTTCAGTCGTTCC...TCCCTCTGGCTCTCTTGCTGCTTCTGACCCACTATAATAAATATTGGAAGGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084097.12 ENSMUST00000105592.8 |
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CDS-3UTR GCA 90 bp | AGTCCTTCCAATATTTATTATAGTGGGTCAGAAGCAGCAAGAGAGCCAGAGGGAAGCCCGACTTGGGCTTaGAGGCTGCAAACTGTAAAG | + |
Preference number: 4 (lower is better) Translates to: SPSNIYYSGSEAAREPEGSPTWA*RLQTVK Trigger: CTTTACAGTTTGCAGCCTGCAAGCCCAAGTCGGGCT...TCCCTCTGGCTCTCTTGCTGCTTCTGACCCACTATAATAAATATTGGAAGGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084097.12 ENSMUST00000105592.8 |
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CDS-3UTR GCA 90 bp | CCTTCCAATATTTATTATAGTGGGTCAGAAGCAGCAAGAGAGCCAGAGGGACAGTCTTCAGCACGTTTTTaGACTGCACTGGAGTGGCAT | + |
Preference number: 4 (lower is better) Translates to: PSNIYYSGSEAAREPEGQSSARF*TALEWH Trigger: ATGCCACTCCAGTGCAGTGCAAAAACGTGCTGAAGA...CTGTCCCTCTGGCTCTCTTGCTGCTTCTGACCCACTATAATAAATATTGGAAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084097.12 ENSMUST00000105592.8 |
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CDS-3UTR GCA 90 bp | CTTCCAATATTTATTATAGTGGGTCAGAAGCAGCAAGAGAGCCAGAGGGACAGGTCTTCAGCACGTTTTTaGACTGCACTGGAGTGGCAT | + |
Preference number: 4 (lower is better) Translates to: LPIFIIVGQKQQESQRDRSSARF*TALEWH Trigger: ATGCCACTCCAGTGCAGTGCAAAAACGTGCTGAAGA...CCTGTCCCTCTGGCTCTCTTGCTGCTTCTGACCCACTATAATAAATATTGGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084097.12 ENSMUST00000105592.8 |
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CDS-3UTR CCA 90 bp | CTTCCAATATTTATTATAGTGGGTCAGAAGCAGCAAGAGAGCCAGAGGGACAGGTTACGGTACTTGTGGTaGTTCATCTTTCGCCTTCGG | + |
Preference number: 4 (lower is better) Translates to: LPIFIIVGQKQQESQRDRLRYLW*FIFRLR Trigger: CCGAAGGCGAAAGATGAACCACCACAAGTACCGTAA...CCTGTCCCTCTGGCTCTCTTGCTGCTTCTGACCCACTATAATAAATATTGGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084097.12 ENSMUST00000105592.8 |
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CDS-3UTR TCA 90 bp | TTGAGTCCTTCCAATATTTATTATAGTGGGTCAGAAGCAGCAAGAGAGCCAGAGCTGGGCAATAAGTATTaGGCAGTCAGCCAGCTCTCT | + |
Preference number: 4 (lower is better) Translates to: LSPSNIYYSGSEAAREPELGNKY*AVSQLS Trigger: AGAGAGCTGGCTGACTGCTCAATACTTATTGCCCAG...CTCTGGCTCTCTTGCTGCTTCTGACCCACTATAATAAATATTGGAAGGACTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084097.12 ENSMUST00000105592.8 |
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CDS-3UTR CCA 90 bp | TTGAGTCCTTCCAATATTTATTATAGTGGGTCAGAAGCAGCAAGAGAGCCAGAGTTACGGTACTTGTGGTaGTTCATCTTTCGCCTTCGG | + |
Preference number: 4 (lower is better) Translates to: LSPSNIYYSGSEAAREPELRYLW*FIFRLR Trigger: CCGAAGGCGAAAGATGAACCACCACAAGTACCGTAA...CTCTGGCTCTCTTGCTGCTTCTGACCCACTATAATAAATATTGGAAGGACTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084097.12 ENSMUST00000105592.8 |
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CDS-3UTR GCA 90 bp | CCTTCCAATATTTATTATAGTGGGTCAGAAGCAGCAAGAGAGCCAGAGGGACAGTTCTCAAATTTGATCTaGTTCTTCTTCAAACGTCCT | + |
Preference number: 4 (lower is better) Translates to: PSNIYYSGSEAAREPEGQFSNLI*FFFKRP Trigger: AGGACGTTTGAAGAAGAAGCAGATCAAATTTGAGAA...CTGTCCCTCTGGCTCTCTTGCTGCTTCTGACCCACTATAATAAATATTGGAAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084097.12 ENSMUST00000105592.8 |
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CDS-3UTR GCA 90 bp | TTGAGTCCTTCCAATATTTATTATAGTGGGTCAGAAGCAGCAAGAGAGCCAGAGTTCTCAAATTTGATCTaGTTCTTCTTCAAACGTCCT | + |
Preference number: 4 (lower is better) Translates to: LSPSNIYYSGSEAAREPEFSNLI*FFFKRP Trigger: AGGACGTTTGAAGAAGAAGCAGATCAAATTTGAGAA...CTCTGGCTCTCTTGCTGCTTCTGACCCACTATAATAAATATTGGAAGGACTCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084097.12 ENSMUST00000105592.8 |
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CDS GCA 90 bp | CCTGCCTTAAGCCAGATGCGCTTCAAGTCTTTCTCAAATTTGATCTaGTTCTTCTTCAAACGTCCTTCCCGGACCTTGCGACGTAGAAAC | + |
Preference number: 5 (lower is better) Translates to: PALSQMRFKSFSNLI*FFFKRPSRTLRRRN Trigger: GTTTCTACGTCGCAAGGTCCGGGAAGGACGTTTGAAGAAGAAGCAGATCAAATTTGAGAAAGACTTGAAGCGCATCTGGCTTAAGGCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084097.12 ENSMUST00000105591.2 ENSMUST00000105592.8 |
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CDS-3UTR CAA 90 bp | CCTTCCAATATTTATTATAGTGGGTCAGAAGCAGCAAGAGAGCCAGAGGGACAGATCTTCAGCACGTTTTaGCACTGCACTGGAGTGGCA | + |
Preference number: 5 (lower is better) Translates to: PSNIYYSGSEAAREPEGQIFSTF*HCTGVA Trigger: TGCCACTCCAGTGCAGTGCAAAAACGTGCTGAAGAT...CTGTCCCTCTGGCTCTCTTGCTGCTTCTGACCCACTATAATAAATATTGGAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084097.12 ENSMUST00000105592.8 |
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CDS-3UTR CAA 90 bp | TTGAGTCCTTCCAATATTTATTATAGTGGGTCAGAAGCAGCAAGAGAGCCAGAGATCTTCAGCACGTTTTaGCACTGCACTGGAGTGGCA | + |
Preference number: 5 (lower is better) Translates to: LSPSNIYYSGSEAAREPEIFSTF*HCTGVA Trigger: TGCCACTCCAGTGCAGTGCAAAAACGTGCTGAAGAT...CTCTGGCTCTCTTGCTGCTTCTGACCCACTATAATAAATATTGGAAGGACTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084097.12 ENSMUST00000105592.8 |
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CDS TCA 72 bp | AGCTGCCAATCACCCCGGAGCCAGGGCAGGAACGACTaGAACCTGCCCAGGGAACAACAGTCCTGGCCAGCC | + |
Preference number: 6 (lower is better) Translates to: SCQSPRSQGRND*NLPREQQSWPA Trigger: GGCTGGCCAGGACTGTTGTTCCCTGGGCAGGTTTCAGTCGTTCCTGCCCTGGCTCCGGGGTGATTGGCAGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084097.12 ENSMUST00000105591.2 ENSMUST00000105592.8 ENSMUST00000139651.8 |
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CDS CCA 72 bp | CTGGGTCCTCTTACCAGGGAGGGAGGCAGCCCGACTTaGGCTTGCAGGCTGCAAACTGTAAAGGGGTCGAAA | + |
Preference number: 6 (lower is better) Translates to: LGPLTREGGSPT*ACRLQTVKGSK Trigger: TTTCGACCCCTTTACAGTTTGCAGCCTGCAAGCCCAAGTCGGGCTGCCTCCCTCCCTGGTAAGAGGACCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084097.12 ENSMUST00000105591.2 ENSMUST00000105592.8 ENSMUST00000139651.8 |
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CDS CAA 72 bp | ACTGGGTCCTCTTACCAGGGAGGGAGGCAGCCCGACTaGGGCTTGCAGGCTGCAAACTGTAAAGGGGTCGAA | + |
Preference number: 6 (lower is better) Translates to: TGSSYQGGRQPD*GLQAANCKGVE Trigger: TTCGACCCCTTTACAGTTTGCAGCCTGCAAGCCCAAGTCGGGCTGCCTCCCTCCCTGGTAAGAGGACCCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084097.12 ENSMUST00000105591.2 ENSMUST00000105592.8 ENSMUST00000139651.8 |
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CDS CAA 90 bp | CTGACTGGGTCCTCTTACCAGGGAGGGAGGCAGCCCGACTTGGGCTaGCAGGCTGCAAACTGTAAAGGGGTCGAAAAGCATAGCTGCCAA | + |
Preference number: 6 (lower is better) Translates to: LTGSSYQGGRQPDLG*QAANCKGVEKHSCQ Trigger: TTGGCAGCTATGCTTTTCGACCCCTTTACAGTTTGCAGCCTGCAAGCCCAAGTCGGGCTGCCTCCCTCCCTGGTAAGAGGACCCAGTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084097.12 ENSMUST00000105591.2 ENSMUST00000105592.8 ENSMUST00000139651.8 |
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CDS CAA 90 bp | CAAGCTCTGACTGGGTCCTCTTACCAGGGAGGGAGGCAGCCCGACTaGGGCTTGCAGGCTGCAAACTGTAAAGGGGTCGAAAAGCATAGC | + |
Preference number: 6 (lower is better) Translates to: QALTGSSYQGGRQPD*GLQAANCKGVEKHS Trigger: GCTATGCTTTTCGACCCCTTTACAGTTTGCAGCCTGCAAGCCCAAGTCGGGCTGCCTCCCTCCCTGGTAAGAGGACCCAGTCAGAGCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084097.12 ENSMUST00000105591.2 ENSMUST00000105592.8 ENSMUST00000139651.8 |
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CDS GCA 72 bp | CCTCTTACCAGGGAGGGAGGCAGCCCGACTTGGGCTTaGAGGCTGCAAACTGTAAAGGGGTCGAAAAGCATA | + |
Preference number: 6 (lower is better) Translates to: PLTREGGSPTWA*RLQTVKGSKSI Trigger: TATGCTTTTCGACCCCTTTACAGTTTGCAGCCTGCAAGCCCAAGTCGGGCTGCCTCCCTCCCTGGTAAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084097.12 ENSMUST00000105591.2 ENSMUST00000105592.8 ENSMUST00000139651.8 |
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CDS CAA 72 bp | TCCTCTTACCAGGGAGGGAGGCAGCCCGACTTGGGCTaGCAGGCTGCAAACTGTAAAGGGGTCGAAAAGCAT | + |
Preference number: 6 (lower is better) Translates to: SSYQGGRQPDLG*QAANCKGVEKH Trigger: ATGCTTTTCGACCCCTTTACAGTTTGCAGCCTGCAAGCCCAAGTCGGGCTGCCTCCCTCCCTGGTAAGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084097.12 ENSMUST00000105591.2 ENSMUST00000105592.8 ENSMUST00000139651.8 |
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CDS CAA 90 bp | TTCAGGCCTGCCTTAAGCCAGATGCGCTTCAAGTCTTTCTCAAATTaGATCTGCTTCTTCTTCAAACGTCCTTCCCGGACCTTGCGACGT | + |
Preference number: 6 (lower is better) Translates to: FRPALSQMRFKSFSN*ICFFFKRPSRTLRR Trigger: ACGTCGCAAGGTCCGGGAAGGACGTTTGAAGAAGAAGCAGATCAAATTTGAGAAAGACTTGAAGCGCATCTGGCTTAAGGCAGGCCTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084097.12 ENSMUST00000105591.2 ENSMUST00000105592.8 |