Pregenerated sensors for AUNIP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078521Ensembl transcript IDs: ENSMUST00000105866.3
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | CCCAGCCCCGCCCTCCTTCCCTCCTACTCTGCCACTTGCAGATACCCTCACATACCCGGTGGTCTGATGTaGCTTCCCATCCCTGGACAG | + |
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Preference number: 4 (lower is better) Translates to: PSPALLPSYSATCRYPHIPGGLM*LPIPGQ Trigger: CTGTCCAGGGATGGGAAGCCACATCAGACCACCGGG...TATGTGAGGGTATCTGCAAGTGGCAGAGTAGGAGGGAAGGAGGGCGGGGCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105866.3 |
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| CDS-3UTR CCA 90 bp | AGCCCCGCCCTCCTTCCCTCCTACTCTGCCACTTGCAGATACCCTCACATAAGCTTGGCCCTGAGCCTGTaGGCTGTCAGGAAACTGCCC | + |
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Preference number: 4 (lower is better) Translates to: SPALLPSYSATCRYPHISLALSL*AVRKLP Trigger: GGGCAGTTTCCTGACAGCCCACAGGCTCAGGGCCAA...GCTTATGTGAGGGTATCTGCAAGTGGCAGAGTAGGAGGGAAGGAGGGCGGGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105866.3 |
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| CDS-3UTR CCA 90 bp | GCTTTATCCCACCTGGCCTTTTACCTAAACCCTCCTCTACCCAGCCCCGCCCTCGGATGCCCAGCTTCCTaGATGTCTGCAGGAGCTGAA | + |
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Preference number: 4 (lower is better) Translates to: ALSHLAFYLNPPLPSPALGCPAS*MSAGAE Trigger: TTCAGCTCCTGCAGACATCCAGGAAGCTGGGCATCC...GAGGGCGGGGCTGGGTAGAGGAGGGTTTAGGTAAAAGGCCAGGTGGGATAAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105866.3 |
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| CDS-3UTR GCA 90 bp | CGCAACTGCTTTATCCCACCTGGCCTTTTACCTAAACCCTCCTCTACCCAGCCCAGATGCACAGGGGCCTaGCTGTTTTCCTTGGTAGGC | + |
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Preference number: 4 (lower is better) Translates to: RNCFIPPGLLPKPSSTQPRCTGA*LFSLVG Trigger: GCCTACCAAGGAAAACAGGCAGGCCCCTGTGCATCT...GGGCTGGGTAGAGGAGGGTTTAGGTAAAAGGCCAGGTGGGATAAAGCAGTTGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105866.3 |
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| CDS-3UTR CCA 90 bp | CCCAGCCCCGCCCTCCTTCCCTCCTACTCTGCCACTTGCAGATACCCTCACATAGGCATTTTAGTGTTGTaGGCAATGACTTGCTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: PSPALLPSYSATCRYPHIGILVL*AMTCWP Trigger: AGGCCAGCAAGTCATTGCCCACAACACTAAAATGCC...TATGTGAGGGTATCTGCAAGTGGCAGAGTAGGAGGGAAGGAGGGCGGGGCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105866.3 |
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| CDS-3UTR TCA 90 bp | TTTATCCCACCTGGCCTTTTACCTAAACCCTCCTCTACCCAGCCCCGCCCTCCTAACTGCCCTGAGCCTTaGTTCCTAGCATTGGTCACA | + |
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Preference number: 4 (lower is better) Translates to: FIPPGLLPKPSSTQPRPPNCPEP*FLALVT Trigger: TGTGACCAATGCTAGGAATCAAGGCTCAGGGCAGTT...AGGAGGGCGGGGCTGGGTAGAGGAGGGTTTAGGTAAAAGGCCAGGTGGGATAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105866.3 |
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| CDS-3UTR TCA 90 bp | AGCGCAACTGCTTTATCCCACCTGGCCTTTTACCTAAACCCTCCTCTACCCAGCCTGCAGGAGCTGAAGTaGCCAAAGGTGATAGCAAGC | + |
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Preference number: 4 (lower is better) Translates to: SATALSHLAFYLNPPLPSLQELK*PKVIAS Trigger: GCTTGCTATCACCTTTGGTCACTTCAGCTCCTGCAG...GCTGGGTAGAGGAGGGTTTAGGTAAAAGGCCAGGTGGGATAAAGCAGTTGCGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105866.3 |
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| CDS-3UTR GCA 90 bp | CCCAGCCCCGCCCTCCTTCCCTCCTACTCTGCCACTTGCAGATACCCTCACATACTAGCTGGGTTCTCTTaGATTCTTTGTTGGTCTGAT | + |
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Preference number: 4 (lower is better) Translates to: PSPALLPSYSATCRYPHILAGFS*ILCWSD Trigger: ATCAGACCAACAAAGAATGCAAGAGAACCCAGCTAG...TATGTGAGGGTATCTGCAAGTGGCAGAGTAGGAGGGAAGGAGGGCGGGGCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105866.3 |
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| CDS-3UTR GCA 90 bp | CGCAACTGCTTTATCCCACCTGGCCTTTTACCTAAACCCTCCTCTACCCAGCCCCTTTACTCTCTCCAGTaGCCATCAGGACATCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: RNCFIPPGLLPKPSSTQPLYSLQ*PSGHQA Trigger: AGCCTGATGTCCTGATGGGCACTGGAGAGAGTAAAG...GGGCTGGGTAGAGGAGGGTTTAGGTAAAAGGCCAGGTGGGATAAAGCAGTTGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105866.3 |
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| CDS-3UTR TCA 90 bp | GGCTTTATTTACATATGGAAAATGTTCCATAGCGCAACTGCTTTATCCCACCTGGGCCCGTCTTGGCCCTaGGCCTGTGGGCTGTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: GFIYIWKMFHSATALSHLGPSWP*ACGLSG Trigger: TCCTGACAGCCCACAGGCTCAGGGCCAAGACGGGCC...CAGGTGGGATAAAGCAGTTGCGCTATGGAACATTTTCCATATGTAAATAAAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105866.3 |
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| CDS-3UTR CCA 90 bp | TTATCCCACCTGGCCTTTTACCTAAACCCTCCTCTACCCAGCCCCGCCCTCCTTTCCAAACAGTCTAGCTaGGTTCTCTTGCATTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: LSHLAFYLNPPLPSPALLSKQSS*VLLHSL Trigger: CAAAGAATGCAAGAGAACCCAGCTAGACTGTTTGGA...AAGGAGGGCGGGGCTGGGTAGAGGAGGGTTTAGGTAAAAGGCCAGGTGGGATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105866.3 |
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| CDS-3UTR TCA 90 bp | GGCTTTATTTACATATGGAAAATGTTCCATAGCGCAACTGCTTTATCCCACCTGCAAACCCTGGCAGCCTaGAATCTGGGGAGACCGAGG | + |
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Preference number: 4 (lower is better) Translates to: GFIYIWKMFHSATALSHLQTLAA*NLGRPR Trigger: CCTCGGTCTCCCCAGATTTCAGGCTGCCAGGGTTTG...CAGGTGGGATAAAGCAGTTGCGCTATGGAACATTTTCCATATGTAAATAAAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105866.3 |
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| CDS-3UTR GCA 90 bp | CACAGGGCTTTATTTACATATGGAAAATGTTCCATAGCGCAACTGCTTTATCCCTGGGGAGACCGAGGATaGCCAGCTTCCTGGATGTCT | + |
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Preference number: 4 (lower is better) Translates to: HRALFTYGKCSIAQLLYPWGDRG*PASWMS Trigger: AGACATCCAGGAAGCTGGGCATCCTCGGTCTCCCCA...GGGATAAAGCAGTTGCGCTATGGAACATTTTCCATATGTAAATAAAGCCCTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105866.3 |
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| CDS-3UTR TCA 90 bp | GCTTTATTTACATATGGAAAATGTTCCATAGCGCAACTGCTTTATCCCACCTGGTCCTCAGTGAAAAGCTaGCTCCAGGAGTCCCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: ALFTYGKCSIAQLLYPTWSSVKS*LQESLS Trigger: TGACAGGGACTCCTGGAGTCAGCTTTTCACTGAGGA...CCAGGTGGGATAAAGCAGTTGCGCTATGGAACATTTTCCATATGTAAATAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105866.3 |
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| CDS-3UTR CCA 90 bp | GCTTTATTTACATATGGAAAATGTTCCATAGCGCAACTGCTTTATCCCACCTGGGTGGCTTCCCATCCCTaGACAGTCTGTCTTAGATTC | + |
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Preference number: 4 (lower is better) Translates to: ALFTYGKCSIAQLLYPTWVASHP*TVCLRF Trigger: GAATCTAAGACAGACTGTCCAGGGATGGGAAGCCAC...CCAGGTGGGATAAAGCAGTTGCGCTATGGAACATTTTCCATATGTAAATAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105866.3 |
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| CDS-3UTR CCA 90 bp | GGCTTTATTTACATATGGAAAATGTTCCATAGCGCAACTGCTTTATCCCACCTGTGGGCAATGACTTGCTaGCCTTGTGAATCCTCAGTG | + |
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Preference number: 4 (lower is better) Translates to: GFIYIWKMFHSATALSHLWAMTC*PCESSV Trigger: CACTGAGGATTCACAAGGCCAGCAAGTCATTGCCCA...CAGGTGGGATAAAGCAGTTGCGCTATGGAACATTTTCCATATGTAAATAAAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105866.3 |
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| CDS-3UTR TCA 90 bp | AGGGCTTTATTTACATATGGAAAATGTTCCATAGCGCAACTGCTTTATCCCACCCTTGTGAATCCTCAGTaGAAAGCTGACTCCAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: RALFTYGKCSIAQLLYPTLVNPQ*KADSRS Trigger: ACTCCTGGAGTCAGCTTTTCACTGAGGATTCACAAG...GGTGGGATAAAGCAGTTGCGCTATGGAACATTTTCCATATGTAAATAAAGCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105866.3 |
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| CDS-3UTR GCA 90 bp | ATTTACATATGGAAAATGTTCCATAGCGCAACTGCTTTATCCCACCTGGCCTTTTTGTGGGCAATGACTTaGTGGCCTTGTGAATCCTCA | + |
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Preference number: 4 (lower is better) Translates to: IYIWKMFHSATALSHLAFLWAMT*WPCESS Trigger: TGAGGATTCACAAGGCCAGCAAGTCATTGCCCACAA...AAAGGCCAGGTGGGATAAAGCAGTTGCGCTATGGAACATTTTCCATATGTAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105866.3 |
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| CDS-3UTR CCA 90 bp | CAGGGCTTTATTTACATATGGAAAATGTTCCATAGCGCAACTGCTTTATCCCACTTACCCTCAGAGTCCTaGGTAAAGAGCAGGTATGAC | + |
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Preference number: 4 (lower is better) Translates to: QGFIYIWKMFHSATALSHLPSES*VKSRYD Trigger: GTCATACCTGCTCTTTACCCAGGACTCTGAGGGTAA...GTGGGATAAAGCAGTTGCGCTATGGAACATTTTCCATATGTAAATAAAGCCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105866.3 |
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| CDS-3UTR TCA 90 bp | GGCTTTATTTACATATGGAAAATGTTCCATAGCGCAACTGCTTTATCCCACCTGCATCATAGTCAAAGATaGCATTTCCAAACCCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: GFIYIWKMFHSATALSHLHHSQR*HFQTLA Trigger: TGCCAGGGTTTGGAAATGTCATCTTTGACTATGATG...CAGGTGGGATAAAGCAGTTGCGCTATGGAACATTTTCCATATGTAAATAAAGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105866.3 |
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| CDS-3UTR CCA 90 bp | CAGGGCTTTATTTACATATGGAAAATGTTCCATAGCGCAACTGCTTTATCCCACCTAGTGCCTCTTCTTTaGGTAAAAGGATCATTAGGT | + |
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Preference number: 4 (lower is better) Translates to: QGFIYIWKMFHSATALSHLVPLL*VKGSLG Trigger: ACCTAATGATCCTTTTACCCAAAGAAGAGGCACTAG...GTGGGATAAAGCAGTTGCGCTATGGAACATTTTCCATATGTAAATAAAGCCCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105866.3 |
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| CDS-3UTR TCA 90 bp | GGCTTTATTTACATATGGAAAATGTTCCATAGCGCAACTGCTTTATCCCACCTGTTTTGGTGCCTAGTTTaGTTAAATGTGTCTGCATCT | + |
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Preference number: 4 (lower is better) Translates to: GFIYIWKMFHSATALSHLFWCLV*LNVSAS Trigger: AGATGCAGACACATTTAATCAAACTAGGCACCAAAA...CAGGTGGGATAAAGCAGTTGCGCTATGGAACATTTTCCATATGTAAATAAAGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105866.3 |
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| CDS-3UTR CAA 90 bp | TTATCCCACCTGGCCTTTTACCTAAACCCTCCTCTACCCAGCCCCGCCCTCCTTCTGAGCAGGCCCGTCTaGGCCCTGAGCCTGTGGGCT | + |
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Preference number: 5 (lower is better) Translates to: LSHLAFYLNPPLPSPALLLSRPV*ALSLWA Trigger: AGCCCACAGGCTCAGGGCCAAGACGGGCCTGCTCAG...AAGGAGGGCGGGGCTGGGTAGAGGAGGGTTTAGGTAAAAGGCCAGGTGGGATAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105866.3 |
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| CDS CCA 90 bp | CCCTGGCAGCCTGAAATCTGGGGAGACCGAGGATGCCCAGCTTCCTaGATGTCTGCAGGAGCTGAAGTGACCAAAGGTGATAGCAAGCCA | + |
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Preference number: 5 (lower is better) Translates to: PWQPEIWGDRGCPAS*MSAGAEVTKGDSKP Trigger: TGGCTTGCTATCACCTTTGGTCACTTCAGCTCCTGCAGACATCCAGGAAGCTGGGCATCCTCGGTCTCCCCAGATTTCAGGCTGCCAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105866.3 |
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| CDS-3UTR CAA 90 bp | ACTGCTTTATCCCACCTGGCCTTTTACCTAAACCCTCCTCTACCCAGCCCCGCCCCTTCCCCTTTCCTCTaGGCCTCTCTTTGGTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: TALSHLAFYLNPPLPSPAPSPFL*ASLWSS Trigger: GCTGGACCAAAGAGAGGCCAAGAGGAAAGGGGAAGG...GGCGGGGCTGGGTAGAGGAGGGTTTAGGTAAAAGGCCAGGTGGGATAAAGCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000105866.3 |
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| CDS TCA 90 bp | AGGCCCGTCTTGGCCCTGAGCCTGTGGGCTGTCAGGAAACTGCCCTaGGCCTTGATTCCTAGCATTGGTCACATCTCGGAAAGGCATTTT | + |
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Preference number: 5 (lower is better) Translates to: RPVLALSLWAVRKLP*ALIPSIGHISERHF Trigger: AAAATGCCTTTCCGAGATGTGACCAATGCTAGGAATCAAGGCTCAGGGCAGTTTCCTGACAGCCCACAGGCTCAGGGCCAAGACGGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105866.3 |
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| CDS GCA 90 bp | GACATTTCCAAACCCTGGCAGCCTGAAATCTGGGGAGACCGAGGATaGCCAGCTTCCTGGATGTCTGCAGGAGCTGAAGTGACCAAAGGT | + |
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Preference number: 5 (lower is better) Translates to: DISKPWQPEIWGDRG*PASWMSAGAEVTKG Trigger: ACCTTTGGTCACTTCAGCTCCTGCAGACATCCAGGAAGCTGGGCATCCTCGGTCTCCCCAGATTTCAGGCTGCCAGGGTTTGGAAATGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105866.3 |
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| CDS-3UTR CAA 90 bp | CGCAACTGCTTTATCCCACCTGGCCTTTTACCTAAACCCTCCTCTACCCAGCCCTTGGTAGGCCCCCTCTaGCCCATTTCAGCTTTGTCC | + |
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Preference number: 5 (lower is better) Translates to: RNCFIPPGLLPKPSSTQPLVGPL*PISALS Trigger: GGACAAAGCTGAAATGGGCAAGAGGGGGCCTACCAA...GGGCTGGGTAGAGGAGGGTTTAGGTAAAAGGCCAGGTGGGATAAAGCAGTTGCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105866.3 |
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| CDS CCA 90 bp | GGCTGGGTCAAAGACATCATAGTCAAAGATGACATTTCCAAACCCTaGCAGCCTGAAATCTGGGGAGACCGAGGATGCCCAGCTTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: GWVKDIIVKDDISKP*QPEIWGDRGCPASW Trigger: CCAGGAAGCTGGGCATCCTCGGTCTCCCCAGATTTCAGGCTGCCAGGGTTTGGAAATGTCATCTTTGACTATGATGTCTTTGACCCAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105866.3 |
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| CDS CCA 90 bp | GCCCATTTCAGCTTTGTCCAAGGGCTGATGGCATTTACTCCCCGGTaGTCTGATGTGGCTTCCCATCCCTGGACAGTCTGTCTTAGATTC | + |
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Preference number: 5 (lower is better) Translates to: AHFSFVQGLMAFTPR*SDVASHPWTVCLRF Trigger: GAATCTAAGACAGACTGTCCAGGGATGGGAAGCCACATCAGACCACCGGGGAGTAAATGCCATCAGCCCTTGGACAAAGCTGAAATGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105866.3 |
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| CDS TCA 90 bp | TTGTGGGCAATGACTTGCTGGCCTTGTGAATCCTCAGTGAAAAGCTaGCTCCAGGAGTCCCTGTCACTCCTTTCACTGTCCCAGGGAAAT | + |
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Preference number: 5 (lower is better) Translates to: LWAMTCWPCESSVKS*LQESLSLLSLSQGN Trigger: ATTTCCCTGGGACAGTGAAAGGAGTGACAGGGACTCCTGGAGTCAGCTTTTCACTGAGGATTCACAAGGCCAGCAAGTCATTGCCCACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105866.3 |
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| CDS CCA 90 bp | TCCAGGGGGCCTTTACTCTCTCCAGTGCCCATCAGGACATCAGGCTaGGTCAAAGACATCATAGTCAAAGATGACATTTCCAAACCCTGG | + |
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Preference number: 5 (lower is better) Translates to: SRGPLLSPVPIRTSG*VKDIIVKDDISKPW Trigger: CCAGGGTTTGGAAATGTCATCTTTGACTATGATGTCTTTGACCCAGCCTGATGTCCTGATGGGCACTGGAGAGAGTAAAGGCCCCCTGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105866.3 |
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| CDS CCA 90 bp | CTCTTGGCCTCTCTTTGGTCCAGCAAACAAGAACGTTCCAAGTATTaGGAAAAGGAAGAATCCAGGGGGCCTTTACTCTCTCCAGTGCCC | + |
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Preference number: 5 (lower is better) Translates to: LLASLWSSKQERSKY*EKEESRGPLLSPVP Trigger: GGGCACTGGAGAGAGTAAAGGCCCCCTGGATTCTTCCTTTTCCCAATACTTGGAACGTTCTTGTTTGCTGGACCAAAGAGAGGCCAAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105866.3 |
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| CDS-3UTR CAA 90 bp | ACTGCTTTATCCCACCTGGCCTTTTACCTAAACCCTCCTCTACCCAGCCCCGCCTCTAGTGCCTCTTCTTaGGGTAAAAGGATCATTAGG | + |
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Preference number: 5 (lower is better) Translates to: TALSHLAFYLNPPLPSPASSASS*GKRIIR Trigger: CCTAATGATCCTTTTACCCAAAGAAGAGGCACTAGA...GGCGGGGCTGGGTAGAGGAGGGTTTAGGTAAAAGGCCAGGTGGGATAAAGCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105866.3 |
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| CDS-3UTR CAA 90 bp | AGCCCCGCCCTCCTTCCCTCCTACTCTGCCACTTGCAGATACCCTCACATAAGCATTTTGGTGCCTAGTTaGATTAAATGTGTCTGCATC | + |
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Preference number: 5 (lower is better) Translates to: SPALLPSYSATCRYPHISILVPS*IKCVCI Trigger: GATGCAGACACATTTAATCAAACTAGGCACCAAAAT...GCTTATGTGAGGGTATCTGCAAGTGGCAGAGTAGGAGGGAAGGAGGGCGGGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105866.3 |
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| CDS-3UTR CAA 90 bp | AACTGCTTTATCCCACCTGGCCTTTTACCTAAACCCTCCTCTACCCAGCCCCGCAGAACGTTCCAAGTATaGGGAAAAGGAAGAATCCAG | + |
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Preference number: 5 (lower is better) Translates to: NCFIPPGLLPKPSSTQPRRTFQV*GKGRIQ Trigger: CTGGATTCTTCCTTTTCCCAATACTTGGAACGTTCT...GCGGGGCTGGGTAGAGGAGGGTTTAGGTAAAAGGCCAGGTGGGATAAAGCAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105866.3 |
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| CDS-3UTR CAA 90 bp | CGCAACTGCTTTATCCCACCTGGCCTTTTACCTAAACCCTCCTCTACCCAGCCCAGCAATGGCAGCATTTaGGTGCCTAGTTTGATTAAA | + |
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Preference number: 5 (lower is better) Translates to: RNCFIPPGLLPKPSSTQPSNGSI*VPSLIK Trigger: TTTAATCAAACTAGGCACCAAAATGCTGCCATTGCT...GGGCTGGGTAGAGGAGGGTTTAGGTAAAAGGCCAGGTGGGATAAAGCAGTTGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105866.3 |
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| CDS CCA 90 bp | AGCGTGACAAAAGATGCAATGCTGGTCTGTCTAGTGCCTCTTCTTTaGGTAAAAGGATCATTAGGTTTCCTCTCTCCAGGAAGCAATGGC | + |
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Preference number: 5 (lower is better) Translates to: SVTKDAMLVCLVPLL*VKGSLGFLSPGSNG Trigger: GCCATTGCTTCCTGGAGAGAGGAAACCTAATGATCCTTTTACCCAAAGAAGAGGCACTAGACAGACCAGCATTGCATCTTTTGTCACGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105866.3 |
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| CDS CCA 90 bp | GTCTTAGATTCACGAAGCCCTTCCCCTTTCCTCTTGGCCTCTCTTTaGTCCAGCAAACAAGAACGTTCCAAGTATTGGGAAAAGGAAGAA | + |
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Preference number: 5 (lower is better) Translates to: VLDSRSPSPFLLASL*SSKQERSKYWEKEE Trigger: TTCTTCCTTTTCCCAATACTTGGAACGTTCTTGTTTGCTGGACCAAAGAGAGGCCAAGAGGAAAGGGGAAGGGCTTCGTGAATCTAAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105866.3 |
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| CDS-3UTR CAA 90 bp | GCTTTATTTACATATGGAAAATGTTCCATAGCGCAACTGCTTTATCCCACCTGGTCTGGTTACCACCACTaGCCATTCCTGATTGTAGCG | + |
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Preference number: 5 (lower is better) Translates to: ALFTYGKCSIAQLLYPTWSGYHH*PFLIVA Trigger: CGCTACAATCAGGAATGGCAAGTGGTGGTAACCAGA...CCAGGTGGGATAAAGCAGTTGCGCTATGGAACATTTTCCATATGTAAATAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105866.3 |
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| CDS TCA 90 bp | AGTCTAGCTGGGTTCTCTTGCATTCTTTGTTGGTCTGATTTTCTTTaGGAGAGAAAATGTTCTTCTGGTTACCACCACTTGCCATTCCTG | + |
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Preference number: 5 (lower is better) Translates to: SLAGFSCILCWSDFL*ERKCSSGYHHLPFL Trigger: CAGGAATGGCAAGTGGTGGTAACCAGAAGAACATTTTCTCTCTCAAAGAAAATCAGACCAACAAAGAATGCAAGAGAACCCAGCTAGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105866.3 |
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| CDS-3UTR CAA 90 bp | AGGGCTTTATTTACATATGGAAAATGTTCCATAGCGCAACTGCTTTATCCCACCAAAGGCATTTTAGTGTaGTGGGCAATGACTTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: RALFTYGKCSIAQLLYPTKGILV*WAMTCW Trigger: CCAGCAAGTCATTGCCCACAACACTAAAATGCCTTT...GGTGGGATAAAGCAGTTGCGCTATGGAACATTTTCCATATGTAAATAAAGCCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105866.3 |
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| CDS CCA 72 bp | TTTACTCCCCGGTGGTCTGATGTGGCTTCCCATCCCTaGACAGTCTGTCTTAGATTCACGAAGCCCTTCCCC | + |
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Preference number: 6 (lower is better) Translates to: FTPRWSDVASHP*TVCLRFTKPFP Trigger: GGGGAAGGGCTTCGTGAATCTAAGACAGACTGTCCAGGGATGGGAAGCCACATCAGACCACCGGGGAGTAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105866.3 |
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| CDS CCA 72 bp | AGCTTTGTCCAAGGGCTGATGGCATTTACTCCCCGGTaGTCTGATGTGGCTTCCCATCCCTGGACAGTCTGT | + |
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Preference number: 6 (lower is better) Translates to: SFVQGLMAFTPR*SDVASHPWTVC Trigger: ACAGACTGTCCAGGGATGGGAAGCCACATCAGACCACCGGGGAGTAAATGCCATCAGCCCTTGGACAAAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105866.3 |
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| CDS CAA 90 bp | CCTCTTGGCCTCTCTTTGGTCCAGCAAACAAGAACGTTCCAAGTATaGGGAAAAGGAAGAATCCAGGGGGCCTTTACTCTCTCCAGTGCC | + |
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Preference number: 6 (lower is better) Translates to: PLGLSLVQQTRTFQV*GKGRIQGAFTLSSA Trigger: GGCACTGGAGAGAGTAAAGGCCCCCTGGATTCTTCCTTTTCCCAATACTTGGAACGTTCTTGTTTGCTGGACCAAAGAGAGGCCAAGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105866.3 |
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| CDS TCA 72 bp | ATGACTTGCTGGCCTTGTGAATCCTCAGTGAAAAGCTaGCTCCAGGAGTCCCTGTCACTCCTTTCACTGTCC | + |
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Preference number: 6 (lower is better) Translates to: MTCWPCESSVKS*LQESLSLLSLS Trigger: GGACAGTGAAAGGAGTGACAGGGACTCCTGGAGTCAGCTTTTCACTGAGGATTCACAAGGCCAGCAAGTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105866.3 |
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| CDS GCA 72 bp | AAAAGGAAGAATCCAGGGGGCCTTTACTCTCTCCAGTaGCCATCAGGACATCAGGCTGGGTCAAAGACATCA | + |
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Preference number: 6 (lower is better) Translates to: KRKNPGGLYSLQ*PSGHQAGSKTS Trigger: TGATGTCTTTGACCCAGCCTGATGTCCTGATGGGCACTGGAGAGAGTAAAGGCCCCCTGGATTCTTCCTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105866.3 |
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| CDS CCA 72 bp | TCACGAAGCCCTTCCCCTTTCCTCTTGGCCTCTCTTTaGTCCAGCAAACAAGAACGTTCCAAGTATTGGGAA | + |
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Preference number: 6 (lower is better) Translates to: SRSPSPFLLASL*SSKQERSKYWE Trigger: TTCCCAATACTTGGAACGTTCTTGTTTGCTGGACCAAAGAGAGGCCAAGAGGAAAGGGGAAGGGCTTCGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105866.3 |
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| CDS CCA 72 bp | GCATTGGTCACATCTCGGAAAGGCATTTTAGTGTTGTaGGCAATGACTTGCTGGCCTTGTGAATCCTCAGTG | + |
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Preference number: 6 (lower is better) Translates to: ALVTSRKGILVL*AMTCWPCESSV Trigger: CACTGAGGATTCACAAGGCCAGCAAGTCATTGCCCACAACACTAAAATGCCTTTCCGAGATGTGACCAATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105866.3 |
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| CDS CCA 72 bp | CCTTTACTCTCTCCAGTGCCCATCAGGACATCAGGCTaGGTCAAAGACATCATAGTCAAAGATGACATTTCC | + |
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Preference number: 6 (lower is better) Translates to: PLLSPVPIRTSG*VKDIIVKDDIS Trigger: GGAAATGTCATCTTTGACTATGATGTCTTTGACCCAGCCTGATGTCCTGATGGGCACTGGAGAGAGTAAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105866.3 |
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| CDS CAA 72 bp | TCTCCAGGAAGCAATGGCAGCATTTTGGTGCCTAGTTaGATTAAATGTGTCTGCATCTTCCGCCTCTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: SPGSNGSILVPS*IKCVCIFRLFS Trigger: GCTGAAGAGGCGGAAGATGCAGACACATTTAATCAAACTAGGCACCAAAATGCTGCCATTGCTTCCTGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105866.3 |
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| CDS CAA 72 bp | CTCTCTTTGGTCCAGCAAACAAGAACGTTCCAAGTATaGGGAAAAGGAAGAATCCAGGGGGCCTTTACTCTC | + |
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Preference number: 6 (lower is better) Translates to: LSLVQQTRTFQV*GKGRIQGAFTL Trigger: GAGAGTAAAGGCCCCCTGGATTCTTCCTTTTCCCAATACTTGGAACGTTCTTGTTTGCTGGACCAAAGAGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105866.3 |
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| CDS CAA 72 bp | CTAGCATTGGTCACATCTCGGAAAGGCATTTTAGTGTaGTGGGCAATGACTTGCTGGCCTTGTGAATCCTCA | + |
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Preference number: 6 (lower is better) Translates to: LALVTSRKGILV*WAMTCWPCESS Trigger: TGAGGATTCACAAGGCCAGCAAGTCATTGCCCACAACACTAAAATGCCTTTCCGAGATGTGACCAATGCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105866.3 |
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| CDS CCA 72 bp | TCTCTTTGGTCCAGCAAACAAGAACGTTCCAAGTATTaGGAAAAGGAAGAATCCAGGGGGCCTTTACTCTCT | + |
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Preference number: 6 (lower is better) Translates to: SLWSSKQERSKY*EKEESRGPLLS Trigger: AGAGAGTAAAGGCCCCCTGGATTCTTCCTTTTCCCAATACTTGGAACGTTCTTGTTTGCTGGACCAAAGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105866.3 |
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| CDS CAA 90 bp | AAAGGATCATTAGGTTTCCTCTCTCCAGGAAGCAATGGCAGCATTTaGGTGCCTAGTTTGATTAAATGTGTCTGCATCTTCCGCCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: KGSLGFLSPGSNGSI*VPSLIKCVCIFRLF Trigger: GAAGAGGCGGAAGATGCAGACACATTTAATCAAACTAGGCACCAAAATGCTGCCATTGCTTCCTGGAGAGAGGAAACCTAATGATCCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105866.3 |
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| CDS CCA 72 bp | AAAGATGCAATGCTGGTCTGTCTAGTGCCTCTTCTTTaGGTAAAAGGATCATTAGGTTTCCTCTCTCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: KDAMLVCLVPLL*VKGSLGFLSPG Trigger: TCCTGGAGAGAGGAAACCTAATGATCCTTTTACCCAAAGAAGAGGCACTAGACAGACCAGCATTGCATCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105866.3 |
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