Pregenerated sensors for AUH (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021460Ensembl transcript IDs: ENSMUST00000021913.16, ENSMUST00000110031.4, ENSMUST00000119311.8, ENSMUST00000120535.8, ENSMUST00000123599.8, ENSMUST00000137064.8, ENSMUST00000230563.2
Found 232 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | TCCACTTTGGTCACTGCAATTTCCCATGGCAGCACGGGGTGGCTCTaGACCACTTCCAGCACTATGGGAGGCTGCGGCGGGCTCTCCTCC | + |
Preference number: 1 (lower is better) Translates to: STLVTAISHGSTGWL*TTSSTMGGCGGLSS Trigger: GGAGGAGAGCCCGCCGCAGCCTCCCATAGTGCTGGAAGTGGTTCAGAGCCACCCCGTGCTGCCATGGGAAATTGCAGTGACCAAAGTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137064.8 |
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3UTR CCA 90 bp | ACAGCTTCAAAGGTTCACCATGAAGAGATAGGCACTGGCTGTGGCTaGAGGCGCCTCCTCCCACTCCCGTTCGCTCGGCCTTTCCATGAA | + |
Preference number: 1 (lower is better) Translates to: TASKVHHEEIGTGCG*RRLLPLPFARPFHE Trigger: TTCATGGAAAGGCCGAGCGAACGGGAGTGGGAGGAGGCGCCTCCAGCCACAGCCAGTGCCTATCTCTTCATGGTGAACCTTTGAAGCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120535.8 |
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3UTR TCA 90 bp | GGTAAGAACTTTCAGCCCCACCCTACTCCACTGGGTGGGCAGGGATaGTGGTCGGAGAATGGGTGCTCAATCCCCAATGGGCAAGGACTT | + |
Preference number: 1 (lower is better) Translates to: GKNFQPHPTPLGGQG*WSENGCSIPNGQGL Trigger: AAGTCCTTGCCCATTGGGGATTGAGCACCCATTCTCCGACCATCATCCCTGCCCACCCAGTGGAGTAGGGTGGGGCTGAAAGTTCTTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
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3UTR GCA 90 bp | CTCCAGAAAGATGCAGAGGGAGGCTGCCACAGGCCTCTCCCGACTTaGTTCTGGGCTCAGGAGACAGCTTCAAAGGTTCACCATGAAGAG | + |
Preference number: 1 (lower is better) Translates to: LQKDAEGGCHRPLPT*FWAQETASKVHHEE Trigger: CTCTTCATGGTGAACCTTTGAAGCTGTCTCCTGAGCCCAGAAGCAAGTCGGGAGAGGCCTGTGGCAGCCTCCCTCTGCATCTTTCTGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120535.8 |
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3UTR CCA 90 bp | CAGCACGGCTGTCTCAGAGGGACCCACACCAGTTCTCTAGCTCGCTaGCCAGGCCAGTATCCAAAAACTCAATTGAACTCTGTCAGGGGG | + |
Preference number: 1 (lower is better) Translates to: QHGCLRGTHTSSLAR*PGQYPKTQLNSVRG Trigger: CCCCCTGACAGAGTTCAATTGAGTTTTTGGATACTGGCCTGGCCAGCGAGCTAGAGAACTGGTGTGGGTCCCTCTGAGACAGCCGTGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
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3UTR GCA 90 bp | GCCAGACAGACATGGCCACAGGTACGGCCTAGGCAAGCAGCCCAGTaGTTTAGTTGTGTCTCGTTAAATAAAGCCTGCACCGTGGCTGCA | + |
Preference number: 1 (lower is better) Translates to: ARQTWPQVRPRQAAQ*FSCVSLNKACTVAA Trigger: TGCAGCCACGGTGCAGGCTTTATTTAACGAGACACAACTAAAGCACTGGGCTGCTTGCCTAGGCCGTACCTGTGGCCATGTCTGTCTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120535.8 |
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3UTR GCA 90 bp | AGTCCTCCCGAGGGCTTCCAGGCTGCAGCTCAGCTGTCAAGCCTCTaGGTGTTCACAGACACATCCTCCGGTGGTCTTCATTTAATGTTG | + |
Preference number: 1 (lower is better) Translates to: SPPEGFQAAAQLSSL*VFTDTSSGGLHLML Trigger: CAACATTAAATGAAGACCACCGGAGGATGTGTCTGTGAACACGCAGAGGCTTGACAGCTGAGCTGCAGCCTGGAAGCCCTCGGGAGGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120535.8 |
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3UTR GCA 90 bp | ATTAAGTTCATTTTGTGTTGGCCAGCTGTTCCTGGGCATGGGGCCTaGCCTGGTGTGTGTCCGGTGTGCCCAGTGACACTCTGCTATAGG | + |
Preference number: 1 (lower is better) Translates to: IKFILCWPAVPGHGA*PGVCPVCPVTLCYR Trigger: CCTATAGCAGAGTGTCACTGGGCACACCGGACACACACCAGGGCAGGCCCCATGCCCAGGAACAGCTGGCCAACACAAAATGAACTTAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120535.8 |
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3UTR CCA 90 bp | CACACAGGCTGTCTAGCAGAGACTGTCCTCCCCTCAAAAATCAATTaGCGCACACCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGCG | + |
Preference number: 1 (lower is better) Translates to: HTGCLAETVLPSKIN*RTPLIPALGRQRQA Trigger: CGCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGTGTGCGCCAATTGATTTTTGAGGGGAGGACAGTCTCTGCTAGACAGCCTGTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
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3UTR CCA 90 bp | AAAGATGCAGAGGGAGGCTGCCACAGGCCTCTCCCGACTTGCTTCTaGGCTCAGGAGACAGCTTCAAAGGTTCACCATGAAGAGATAGGC | + |
Preference number: 1 (lower is better) Translates to: KDAEGGCHRPLPTCF*AQETASKVHHEEIG Trigger: GCCTATCTCTTCATGGTGAACCTTTGAAGCTGTCTCCTGAGCCCAGAAGCAAGTCGGGAGAGGCCTGTGGCAGCCTCCCTCTGCATCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120535.8 |
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3UTR TCA 90 bp | ACAGGTGAAAGGCTAAGGCAGCCTGGTGAAGGAGGAATGTTTCGCTaGAGCAGACACAGGAGAGGGGATGCTCTGCTGAAGCAAGCTCGT | + |
Preference number: 1 (lower is better) Translates to: TGERLRQPGEGGMFR*SRHRRGDALLKQAR Trigger: ACGAGCTTGCTTCAGCAGAGCATCCCCTCTCCTGTGTCTGCTTCAGCGAAACATTCCTCCTTCACCAGGCTGCCTTAGCCTTTCACCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119311.8 |
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3UTR CCA 90 bp | GGTGGCTTTTACCAGCTCTCTGGTTTCCTGTCACTGCTGTGTGCTTaGGCCACTACGATATCACTAGCAGGTGATGCAAGCAGGAGCCTT | + |
Preference number: 1 (lower is better) Translates to: GGFYQLSGFLSLLCA*ATTISLAGDASRSL Trigger: AAGGCTCCTGCTTGCATCACCTGCTAGTGATATCGTAGTGGCCCAAGCACACAGCAGTGACAGGAAACCAGAGAGCTGGTAAAAGCCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
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3UTR CCA 90 bp | GTAGCTGGCATGCACTGGCAAGCTTGGTGGCTTTTACCAGCTCTCTaGTTTCCTGTCACTGCTGTGTGCTTGGGCCACTACGATATCACT | + |
Preference number: 1 (lower is better) Translates to: VAGMHWQAWWLLPAL*FPVTAVCLGHYDIT Trigger: AGTGATATCGTAGTGGCCCAAGCACACAGCAGTGACAGGAAACCAGAGAGCTGGTAAAAGCCACCAAGCTTGCCAGTGCATGCCAGCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
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3UTR GCA 90 bp | AGGTTGTGGCCAGGGCAGATGAAACCTAACGTGCTTGGTGTCAGCTaGCCTGCTGTTGCTAGGAAAGCAACTACAGACGTGTCTGTCATT | + |
Preference number: 1 (lower is better) Translates to: RLWPGQMKPNVLGVS*PAVARKATTDVSVI Trigger: AATGACAGACACGTCTGTAGTTGCTTTCCTAGCAACAGCAGGGCAGCTGACACCAAGCACGTTAGGTTTCATCTGCCCTGGCCACAACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119311.8 |
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3UTR GCA 90 bp | GAACTCGATTGCTGGTGTATCCGTGAGGTGTTTGCAAGTGGACCATaGTGCCACTGCCTGCTAACCTGTGAACTGAACTGCCGATTTCCA | + |
Preference number: 1 (lower is better) Translates to: ELDCWCIREVFASGP*CHCLLTCELNCRFP Trigger: TGGAAATCGGCAGTTCAGTTCACAGGTTAGCAGGCAGTGGCAGCATGGTCCACTTGCAAACACCTCACGGATACACCAGCAATCGAGTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119311.8 |
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3UTR GCA 90 bp | GCAAGTGGACCATGCTGCCACTGCCTGCTAACCTGTGAACTGAACTaGCGATTTCCAGATTTCCAGACAACACAGACTGGAGTTGCTTTC | + |
Preference number: 1 (lower is better) Translates to: ASGPCCHCLLTCELN*RFPDFQTTQTGVAF Trigger: GAAAGCAACTCCAGTCTGTGTTGTCTGGAAATCTGGAAATCGGCAGTTCAGTTCACAGGTTAGCAGGCAGTGGCAGCATGGTCCACTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119311.8 |
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3UTR GCA 90 bp | AGGCAAGCAGCCCAGTGCTTTAGTTGTGTCTCGTTAAATAAAGCCTaGACCGTGGCTGCAGCAAGGCTTCTTGTCCTCTTTCTGTTGGTG | + |
Preference number: 1 (lower is better) Translates to: RQAAQCFSCVSLNKA*TVAAARLLVLFLLV Trigger: CACCAACAGAAAGAGGACAAGAAGCCTTGCTGCAGCCACGGTGCAGGCTTTATTTAACGAGACACAACTAAAGCACTGGGCTGCTTGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120535.8 |
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3UTR GCA 90 bp | GCCCAAACTCACTCACTAAAAACAACTCAAGGAACTCAGGCAATGTaGAGTTCTACCACTGTGGAGGCAAGCCTCAGAAACGTGCCAGCA | + |
Preference number: 1 (lower is better) Translates to: AQTHSLKTTQGTQAM*SSTTVEASLRNVPA Trigger: TGCTGGCACGTTTCTGAGGCTTGCCTCCACAGTGGTAGAACTGCACATTGCCTGAGTTCCTTGAGTTGTTTTTAGTGAGTGAGTTTGGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
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3UTR TCA 90 bp | CTAAGTGCCCATGTCTCTCCAAGTGGCTTGAGGCCACTACTTGCATaGCTGATTTCTGGCTCCCAGCATCATTTGTTGTTGTCAAAGACC | + |
Preference number: 1 (lower is better) Translates to: LSAHVSPSGLRPLLA*LISGSQHHLLLSKT Trigger: GGTCTTTGACAACAACAAATGATGCTGGGAGCCAGAAATCAGTCATGCAAGTAGTGGCCTCAAGCCACTTGGAGAGACATGGGCACTTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119311.8 |
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3UTR GCA 90 bp | CTGGACATTTGTGAGAAGAGCCTAGGAGGTACAGAGCACTGGGGGTaGAGGAGTGCTAAAAAGCAAACAATTCTCATGGAGCAGGTAAGT | + |
Preference number: 1 (lower is better) Translates to: LDICEKSLGGTEHWG*RSAKKQTILMEQVS Trigger: ACTTACCTGCTCCATGAGAATTGTTTGCTTTTTAGCACTCCTGCACCCCCAGTGCTCTGTACCTCCTAGGCTCTTCTCACAAATGTCCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
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3UTR GCA 90 bp | GCTCCCTCGCAGATACTGCGACTATCTGAAGTACATGATCTGAGGTaGTTCCTAAAATGTGAGGGCATCAAGGAAACCAGCTGTATGGAC | + |
Preference number: 1 (lower is better) Translates to: APSQILRLSEVHDLR*FLKCEGIKETSCMD Trigger: GTCCATACAGCTGGTTTCCTTGATGCCCTCACATTTTAGGAAGCACCTCAGATCATGTACTTCAGATAGTCGCAGTATCTGCGAGGGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
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3UTR CCA 90 bp | AAGCAAACAATTCTCATGGAGCAGGTAAGTTTCAGGGAGAGTAGCTaGCATGCACTGGCAAGCTTGGTGGCTTTTACCAGCTCTCTGGTT | + |
Preference number: 1 (lower is better) Translates to: KQTILMEQVSFRESS*HALASLVAFTSSLV Trigger: AACCAGAGAGCTGGTAAAAGCCACCAAGCTTGCCAGTGCATGCCAGCTACTCTCCCTGAAACTTACCTGCTCCATGAGAATTGTTTGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
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3UTR TCA 90 bp | GTGCCTGGCTTAGACTCCAGGTTTCTGGTACTGAGTCCCAAGCTTTaGACTCTGGAGTACCTTTTGTTATTCAAAGCAGCCCTTCCCAAA | + |
Preference number: 1 (lower is better) Translates to: VPGLDSRFLVLSPKL*TLEYLLLFKAALPK Trigger: TTTGGGAAGGGCTGCTTTGAATAACAAAAGGTACTCCAGAGTTCAAAGCTTGGGACTCAGTACCAGAAACCTGGAGTCTAAGCCAGGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
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3UTR TCA 90 bp | TCTTTTCTCCTTAAAAGCAAGAAGACCTTCCAGTCTGTCCTTTGTTaGGATGGTCTCTTCCAGAATGTCACTGGGCGTCGGGAGTCACTC | + |
Preference number: 1 (lower is better) Translates to: SFLLKSKKTFQSVLC*DGLFQNVTGRRESL Trigger: GAGTGACTCCCGACGCCCAGTGACATTCTGGAAGAGACCATCTCAACAAAGGACAGACTGGAAGGTCTTCTTGCTTTTAAGGAGAAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137064.8 |
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3UTR GCA 90 bp | ACTGAACTGCCGATTTCCAGATTTCCAGACAACACAGACTGGAGTTaGTTTCTAAACAGGTCCACTTCCCCCACCCCCATCCTTTCTTTT | + |
Preference number: 1 (lower is better) Translates to: TELPISRFPDNTDWS*FLNRSTSPTPILSF Trigger: AAAAGAAAGGATGGGGGTGGGGGAAGTGGACCTGTTTAGAAAGCAACTCCAGTCTGTGTTGTCTGGAAATCTGGAAATCGGCAGTTCAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000119311.8 |
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3UTR GCA 90 bp | TTCCAGGGCCAAAAGTATCTTTTTGTGATGGCTTCGGCCTATGGTTaGCATTTGGAACACAAGTCTCAAGCCCTGCCATCTTACCACAAT | + |
Preference number: 1 (lower is better) Translates to: FQGQKYLFVMASAYG*HLEHKSQALPSYHN Trigger: ATTGTGGTAAGATGGCAGGGCTTGAGACTTGTGTTCCAAATGGCAACCATAGGCCGAAGCCATCACAAAAAGATACTTTTGGCCCTGGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120535.8 |
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3UTR GCA 90 bp | CTTCTGACCAACCATGATATAAATGTGGGGTTTCCCTCAAAGCCCTaGCCAAACTCACTCACTAAAAACAACTCAAGGAACTCAGGCAAT | + |
Preference number: 1 (lower is better) Translates to: LLTNHDINVGFPSKP*PNSLTKNNSRNSGN Trigger: ATTGCCTGAGTTCCTTGAGTTGTTTTTAGTGAGTGAGTTTGGGCAGGGCTTTGAGGGAAACCCCACATTTATATCATGGTTGGTCAGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
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3UTR GCA 90 bp | CAAGCTCGTGAAAGGACACGTGATAAGGATTCTTTGCTAATGACATaGGTGTATTGGTCCACCTTACACTGTGTAGTTGAGCTGCATTTG | + |
Preference number: 1 (lower is better) Translates to: QARERTRDKDSLLMT*VYWSTLHCVVELHL Trigger: CAAATGCAGCTCAACTACACAGTGTAAGGTGGACCAATACACGCATGTCATTAGCAAAGAATCCTTATCACGTGTCCTTTCACGAGCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119311.8 |
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3UTR TCA 90 bp | GTTCACATAAAAATGATAGACAGACAGATAGACCAACTCACCGACTaGCCAACCATTAAGTTCATTTTGTGTTGGCCAGCTGTTCCTGGG | + |
Preference number: 1 (lower is better) Translates to: VHIKMIDRQIDQLTD*PTIKFILCWPAVPG Trigger: CCCAGGAACAGCTGGCCAACACAAAATGAACTTAATGGTTGGTCAGTCGGTGAGTTGGTCTATCTGTCTGTCTATCATTTTTATGTGAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120535.8 |
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3UTR GCA 90 bp | TGCTTCCTAAAATGTGAGGGCATCAAGGAAACCAGCTGTATGGACTaGCTTGTGCTAGGAATAAAAATCAGAAATCCACAAGAACCACTG | + |
Preference number: 1 (lower is better) Translates to: CFLKCEGIKETSCMD*LVLGIKIRNPQEPL Trigger: CAGTGGTTCTTGTGGATTTCTGATTTTTATTCCTAGCACAAGGCAGTCCATACAGCTGGTTTCCTTGATGCCCTCACATTTTAGGAAGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
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3UTR TCA 90 bp | ATCATAAGACAAATCCTAAGAACAATTCATACTTCTGACCAACCATaGTATAAATGTGGGGTTTCCCTCAAAGCCCTGCCCAAACTCACT | + |
Preference number: 1 (lower is better) Translates to: IIRQILRTIHTSDQP*YKCGVSLKALPKLT Trigger: AGTGAGTTTGGGCAGGGCTTTGAGGGAAACCCCACATTTATATCATGGTTGGTCAGAAGTATGAATTGTTCTTAGGATTTGTCTTATGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
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3UTR-3UTR CCA 90 bp | GCACGGGGTGGCTCTGAACCACTTCCAGCACTATGGGAGGCTGCGGCGGGCTCTCCACTTCCAGCACTATaGGAGGCTGCGGCGGGCTCT | + |
Preference number: 2 (lower is better) Translates to: ARGGSEPLPALWEAAAGSPLPAL*EAAAGS Trigger: AGAGCCCGCCGCAGCCTCCCATAGTGCTGGAAGTGG...AGAGCCCGCCGCAGCCTCCCATAGTGCTGGAAGTGGTTCAGAGCCACCCCGTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021913.16 ENSMUST00000137064.8 |
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3UTR-3UTR GCA 90 bp | GCTGTTCCTGGGCATGGGGCCTGCCCTGGTGTGTGTCCGGTGTGCCCAGTGACACGAGGGCTTCCAGGCTaGAGCTCAGCTGTCAAGCCT | + |
Preference number: 2 (lower is better) Translates to: AVPGHGACPGVCPVCPVTRGLPG*SSAVKP Trigger: AGGCTTGACAGCTGAGCTGCAGCCTGGAAGCCCTCG...TGTCACTGGGCACACCGGACACACACCAGGGCAGGCCCCATGCCCAGGAACAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120535.8 |
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3UTR-3UTR GCA 90 bp | CAAGGTGGGAGCACGGCAGCATCCAGGCAGACACAGGGATGGAAGAGCGGAGAGCTGGCAAGCCTCCTGTaGATATCAGTGCAGCAGGTC | + |
Preference number: 2 (lower is better) Translates to: QGGSTAASRQTQGWKSGELASLL*ISVQQV Trigger: GACCTGCTGCACTGATATGCACAGGAGGCTTGCCAG...CTCTCCGCTCTTCCATCCCTGTGTCTGCCTGGATGCTGCCGTGCTCCCACCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119311.8 |
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3UTR CAA 90 bp | GACAGCGGTGATGCTGGGCAGGCGCAGTGCTCTGAGATCAATCACTaGGGTTGTGTGCGGAAAGTGCTGAGTGGCCAGGCCAAAGGCAAG | + |
Preference number: 2 (lower is better) Translates to: DSGDAGQAQCSEINH*GCVRKVLSGQAKGK Trigger: CTTGCCTTTGGCCTGGCCACTCAGCACTTTCCGCACACAACCCAAGTGATTGATCTCAGAGCACTGCGCCTGCCCAGCATCACCGCTGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119311.8 |
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3UTR-3UTR GCA 90 bp | GGCTTCCAGGCTGCAGCTCAGCTGTCAAGCCTCTGCGTGTTCACAGACACATCCAGCCTGCACCGTGGCTaGAGCAAGGCTTCTTGTCCT | + |
Preference number: 2 (lower is better) Translates to: GFQAAAQLSSLCVFTDTSSLHRG*SKASCP Trigger: AGGACAAGAAGCCTTGCTGCAGCCACGGTGCAGGCT...GGATGTGTCTGTGAACACGCAGAGGCTTGACAGCTGAGCTGCAGCCTGGAAGCC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120535.8 |
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3UTR-3UTR CCA 90 bp | AGTGAGAACCCACTCTCCACTTTGGTCACTGCAATTTCCCATGGCAGCACGGGGCCACTTCCAGCACTATaGGAGGCTGCGGCGGGCTCT | + |
Preference number: 2 (lower is better) Translates to: SENPLSTLVTAISHGSTGPLPAL*EAAAGS Trigger: AGAGCCCGCCGCAGCCTCCCATAGTGCTGGAAGTGG...CCCCGTGCTGCCATGGGAAATTGCAGTGACCAAAGTGGAGAGTGGGTTCTCACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021913.16 ENSMUST00000137064.8 |
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3UTR-3UTR CCA 90 bp | TTGGTGACTCTGGCTCTGGCTGTGTGTCCCTCACACAGATTCATGAGAAGCACCGATAGGCACTGGCTGTaGCTGGAGGCGCCTCCTCCC | + |
Preference number: 2 (lower is better) Translates to: LVTLALAVCPSHRFMRSTDRHWL*LEAPPP Trigger: GGGAGGAGGCGCCTCCAGCCACAGCCAGTGCCTATC...GGTGCTTCTCATGAATCTGTGTGAGGGACACACAGCCAGAGCCAGAGTCACCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120535.8 |
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3UTR-3UTR CCA 90 bp | GAACCCACTCTCCACTTTGGTCACTGCAATTTCCCATGGCAGCACGGGGTGGCTCACTGCAATTTCCCATaGCAGCACGGGGTGGCTCTG | + |
Preference number: 2 (lower is better) Translates to: EPTLHFGHCNFPWQHGVAHCNFP*QHGVAL Trigger: CAGAGCCACCCCGTGCTGCCATGGGAAATTGCAGTG...AGCCACCCCGTGCTGCCATGGGAAATTGCAGTGACCAAAGTGGAGAGTGGGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021913.16 ENSMUST00000137064.8 |
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3UTR-3UTR GCA 90 bp | GGGAGCACGGCAGCATCCAGGCAGACACAGGGATGGAAGAGCGGAGAGTTCTACCTTGAGGCCACTACTTaGATGACTGATTTCTGGCTC | + |
Preference number: 2 (lower is better) Translates to: GSTAASRQTQGWKSGEFYLEATT*MTDFWL Trigger: GAGCCAGAAATCAGTCATGCAAGTAGTGGCCTCAAG...GTAGAACTCTCCGCTCTTCCATCCCTGTGTCTGCCTGGATGCTGCCGTGCTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119311.8 |
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3UTR-3UTR CCA 90 bp | TGGTTGCCATTTGGAACACAAGTCTCAAGCCCTGCCATCTTACCACAATGTTCTGGCACTGGCTGTGGCTaGAGGCGCCTCCTCCCACTC | + |
Preference number: 2 (lower is better) Translates to: WLPFGTQVSSPAILPQCSGTGCG*RRLLPL Trigger: GAGTGGGAGGAGGCGCCTCCAGCCACAGCCAGTGCC...AGAACATTGTGGTAAGATGGCAGGGCTTGAGACTTGTGTTCCAAATGGCAACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120535.8 |
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3UTR CAA 90 bp | TCACACAGGCTGTCTAGCAGAGACTGTCCTCCCCTCAAAAATCAATaGGCGCACACCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGC | + |
Preference number: 2 (lower is better) Translates to: SHRLSSRDCPPLKNQ*AHTFNPSTWEAEAG Trigger: GCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGTGTGCGCCAATTGATTTTTGAGGGGAGGACAGTCTCTGCTAGACAGCCTGTGTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
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3UTR CAA 90 bp | AAAGCCTGCACCGTGGCTGCAGCAAGGCTTCTTGTCCTCTTTCTGTaGGTGACTCTGGCTCTGGCTGTGTGTCCCTCACACAGATTCATG | + |
Preference number: 2 (lower is better) Translates to: KACTVAAARLLVLFL*VTLALAVCPSHRFM Trigger: CATGAATCTGTGTGAGGGACACACAGCCAGAGCCAGAGTCACCAACAGAAAGAGGACAAGAAGCCTTGCTGCAGCCACGGTGCAGGCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120535.8 |
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3UTR-3UTR TCA 90 bp | CCTGGCTTACAGGTTCAGCCCATTATCATCAAGGTGGGAGCACGGCAGCATCCAAGGCCACTACTTGCATaGCTGATTTCTGGCTCCCAG | + |
Preference number: 2 (lower is better) Translates to: PGLQVQPIIIKVGARQHPRPLLA*LISGSQ Trigger: CTGGGAGCCAGAAATCAGTCATGCAAGTAGTGGCCT...TGGATGCTGCCGTGCTCCCACCTTGATGATAATGGGCTGAACCTGTAAGCCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119311.8 |
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3UTR-3UTR TCA 90 bp | ACAGGCTGCCGTGAGTGCTGGGAACCAAACTCGGGTCCTCTGCAACCTGCAGTAAGCCCACGTCCACAGTaGCACATCTATTCTAACAAG | + |
Preference number: 2 (lower is better) Translates to: TGCRECWEPNSGPLQPAVSPRPQ*HIYSNK Trigger: CTTGTTAGAATAGATGTGTCACTGTGGACGTGGGCT...TACTGCAGGTTGCAGAGGACCCGAGTTTGGTTCCCAGCACTCACGGCAGCCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119311.8 |
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3UTR-3UTR GCA 90 bp | GAACCCACTCTCCACTTTGGTCACTGCAATTTCCCATGGCAGCACGGGGTGGCTCTCCACTTTGGTCACTaGAATTTCCCATGGCAGCAC | + |
Preference number: 2 (lower is better) Translates to: EPTLHFGHCNFPWQHGVALHFGH*NFPWQH Trigger: GTGCTGCCATGGGAAATTGCAGTGACCAAAGTGGAG...AGCCACCCCGTGCTGCCATGGGAAATTGCAGTGACCAAAGTGGAGAGTGGGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021913.16 ENSMUST00000137064.8 |
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3UTR-3UTR GCA 90 bp | GACAACACAGACTGGAGTTGCTTTCTAAACAGGTCCACTTCCCCCACCCCCATCGCTGGGCAGGCGCAGTaGTCTGAGATCAATCACTTG | + |
Preference number: 2 (lower is better) Translates to: DNTDWSCFLNRSTSPTPIAGQAQ*SEINHL Trigger: CAAGTGATTGATCTCAGAGCACTGCGCCTGCCCAGC...GATGGGGGTGGGGGAAGTGGACCTGTTTAGAAAGCAACTCCAGTCTGTGTTGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000119311.8 |
||
3UTR CAA 90 bp | GAGCAGGTAAGTTTCAGGGAGAGTAGCTGGCATGCACTGGCAAGCTaGGTGGCTTTTACCAGCTCTCTGGTTTCCTGTCACTGCTGTGTG | + |
Preference number: 2 (lower is better) Translates to: EQVSFRESSWHALAS*VAFTSSLVSCHCCV Trigger: CACACAGCAGTGACAGGAAACCAGAGAGCTGGTAAAAGCCACCAAGCTTGCCAGTGCATGCCAGCTACTCTCCCTGAAACTTACCTGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
||
3UTR-3UTR CCA 90 bp | TGCATCTACTTCCTGGAGAGTCCTCCCGAGGGCTTCCAGGCTGCAGCTCAGCTGAGACACATCCTCCGGTaGTCTTCATTTAATGTTGAC | + |
Preference number: 2 (lower is better) Translates to: CIYFLESPPEGFQAAAQLRHILR*SSFNVD Trigger: GTCAACATTAAATGAAGACCACCGGAGGATGTGTCT...CAGCTGAGCTGCAGCCTGGAAGCCCTCGGGAGGACTCTCCAGGAAGTAGATGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120535.8 |
||
3UTR-3UTR TCA 90 bp | CACCCTCAGTCACACTCCCACCTGCCCTGCCCTAAGCAACCTCACTTTTCCATGATCCAAAAACTCAATTaGACTCTGTCAGGGGGAGCT | + |
Preference number: 2 (lower is better) Translates to: HPQSHSHLPCPKQPHFSMIQKLN*TLSGGA Trigger: AGCTCCCCCTGACAGAGTTCAATTGAGTTTTTGGAT...CATGGAAAAGTGAGGTTGCTTAGGGCAGGGCAGGTGGGAGTGTGACTGAGGGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
||
3UTR-3UTR TCA 90 bp | AGACTGGAGTTGCTTTCTAAACAGGTCCACTTCCCCCACCCCCATCCTTTCTTTAGAGGCTGGAAGATCTaGGGCAAGTTGGCTCCAAGC | + |
Preference number: 2 (lower is better) Translates to: RLELLSKQVHFPHPHPFFRGWKI*GKLAPS Trigger: GCTTGGAGCCAACTTGCCTCAGATCTTCCAGCCTCT...AAAGAAAGGATGGGGGTGGGGGAAGTGGACCTGTTTAGAAAGCAACTCCAGTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000119311.8 |
||
3UTR-3UTR GCA 90 bp | CACCCTCAGTCACACTCCCACCTGCCCTGCCCTAAGCAACCTCACTTTTCCATGTTTCCCTCAAAGCCCTaGCCAAACTCACTCACTAAA | + |
Preference number: 2 (lower is better) Translates to: HPQSHSHLPCPKQPHFSMFPSKP*PNSLTK Trigger: TTTAGTGAGTGAGTTTGGGCAGGGCTTTGAGGGAAA...CATGGAAAAGTGAGGTTGCTTAGGGCAGGGCAGGTGGGAGTGTGACTGAGGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
||
3UTR-3UTR CCA 90 bp | CACCCTCAGTCACACTCCCACCTGCCCTGCCCTAAGCAACCTCACTTTTCCATGTCGAGGAAGAAAGGTTaGTGTGATTCATTTGAGGGC | + |
Preference number: 2 (lower is better) Translates to: HPQSHSHLPCPKQPHFSMSRKKG*CDSFEG Trigger: GCCCTCAAATGAATCACACCAACCTTTCTTCCTCGA...CATGGAAAAGTGAGGTTGCTTAGGGCAGGGCAGGTGGGAGTGTGACTGAGGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
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3UTR-3UTR CCA 90 bp | GTTTGTGGCTCTCATATCTTCGCTTCCCTGAGAGAGGCTGAGAACTTCTCTTGGGGACAGTATTCCGGCTaGTCTGCTGAGGCGGAAACA | + |
Preference number: 2 (lower is better) Translates to: VCGSHIFASLREAENFSWGQYSG*SAEAET Trigger: TGTTTCCGCCTCAGCAGACCAGCCGGAATACTGTCC...CCAAGAGAAGTTCTCAGCCTCTCTCAGGGAAGCGAAGATATGAGAGCCACAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119311.8 |
||
3UTR-3UTR TCA 90 bp | TCTGGTACTGAGTCCCAAGCTTTGAACTCTGGAGTACCTTTTGTTATTCAAAGCGCGTCCATGTGCTCATaGGCGCCACACTGGGAACCG | + |
Preference number: 2 (lower is better) Translates to: SGTESQALNSGVPFVIQSASMCS*APHWEP Trigger: CGGTTCCCAGTGTGGCGCTCATGAGCACATGGACGC...GCTTTGAATAACAAAAGGTACTCCAGAGTTCAAAGCTTGGGACTCAGTACCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
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3UTR-3UTR TCA 90 bp | AAACAGGAAGGCAAAGATGCTGGGAAACACAGCTCCCTCGCAGATACTGCGACTGATGCTGGACATTTGTaGGAAGAGCCTAGGAGGTAC | + |
Preference number: 2 (lower is better) Translates to: KQEGKDAGKHSSLADTATDAGHL*EEPRRY Trigger: GTACCTCCTAGGCTCTTCTCACAAATGTCCAGCATC...AGTCGCAGTATCTGCGAGGGAGCTGTGTTTCCCAGCATCTTTGCCTTCCTGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
||
3UTR-3UTR TCA 90 bp | AGACTGGAGTTGCTTTCTAAACAGGTCCACTTCCCCCACCCCCATCCTTTCTTTTCTCTCCAAGTGGCTTaGGGCCACTACTTGCATGAC | + |
Preference number: 2 (lower is better) Translates to: RLELLSKQVHFPHPHPFFSLQVA*GHYLHD Trigger: GTCATGCAAGTAGTGGCCTCAAGCCACTTGGAGAGA...AAAGAAAGGATGGGGGTGGGGGAAGTGGACCTGTTTAGAAAGCAACTCCAGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000119311.8 |
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3UTR-3UTR GCA 90 bp | CTGCGACTATCTGAAGTACATGATCTGAGGTGCTTCCTAAAATGTGAGGGCATCAGTCACACTCCCACCTaGCCTGCCCTAAGCAACCTC | + |
Preference number: 2 (lower is better) Translates to: LRLSEVHDLRCFLKCEGISHTPT*PALSNL Trigger: GAGGTTGCTTAGGGCAGGGCAGGTGGGAGTGTGACT...GATGCCCTCACATTTTAGGAAGCACCTCAGATCATGTACTTCAGATAGTCGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
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3UTR-3UTR GCA 90 bp | GAAAGGACCAGGACAGGTCTTGCCACTGTTGACTCGATTTGCTGCATGCATGAACTGGTTTCCTGTCACTaGTGTGTGCTTGGGCCACTA | + |
Preference number: 2 (lower is better) Translates to: ERTRTGLATVDSICCMHELVSCH*CVLGPL Trigger: TAGTGGCCCAAGCACACAGCAGTGACAGGAAACCAG...TTCATGCATGCAGCAAATCGAGTCAACAGTGGCAAGACCTGTCCTGGTCCTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
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3UTR-3UTR CCA 90 bp | TCACTAGCAGGTGATGCAAGCAGGAGCCTTCATCAGAGATCACACCTGATGGTGACCGCTCCTTTAGGGTaGGCCTTCACACCTCAATTT | + |
Preference number: 2 (lower is better) Translates to: SLAGDASRSLHQRSHLMVTAPLG*AFTPQF Trigger: AAATTGAGGTGTGAAGGCCCACCCTAAAGGAGCGGT...CACCATCAGGTGTGATCTCTGATGAAGGCTCCTGCTTGCATCACCTGCTAGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
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3UTR-3UTR CCA 90 bp | TTCAGCCCATTATCATCAAGGTGGGAGCACGGCAGCATCCAGGCAGACACAGGGTGCATGACTGATTTCTaGCTCCCAGCATCATTTGTT | + |
Preference number: 2 (lower is better) Translates to: FSPLSSRWEHGSIQADTGCMTDF*LPASFV Trigger: AACAAATGATGCTGGGAGCCAGAAATCAGTCATGCA...CCCTGTGTCTGCCTGGATGCTGCCGTGCTCCCACCTTGATGATAATGGGCTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119311.8 |
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3UTR CAA 90 bp | AGCCATGATAAAATGCCTCGAGGAAGAAAGGTTGGTGTGATTCATTaGAGGGCACACTCTGTAAGGCAGGGAAGTCCTGGGGGAAGCTTC | + |
Preference number: 2 (lower is better) Translates to: SHDKMPRGRKVGVIH*RAHSVRQGSPGGSF Trigger: GAAGCTTCCCCCAGGACTTCCCTGCCTTACAGAGTGTGCCCTCAAATGAATCACACCAACCTTTCTTCCTCGAGGCATTTTATCATGGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
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3UTR-3UTR GCA 90 bp | AAACAGGAAGGCAAAGATGCTGGGAAACACAGCTCCCTCGCAGATACTGCGACTAAATCCTACAGCAGATaGAGGGGGCAACTTGGCTTT | + |
Preference number: 2 (lower is better) Translates to: KQEGKDAGKHSSLADTATKSYSR*RGQLGF Trigger: AAAGCCAAGTTGCCCCCTGCATCTGCTGTAGGATTT...AGTCGCAGTATCTGCGAGGGAGCTGTGTTTCCCAGCATCTTTGCCTTCCTGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
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3UTR-3UTR GCA 90 bp | AAAAAGCAAACAATTCTCATGGAGCAGGTAAGTTTCAGGGAGAGTAGCTGGCATAGTCAGGGGAGGCTCTaGACCCTCAGTCACACTCCC | + |
Preference number: 2 (lower is better) Translates to: KKQTILMEQVSFRESSWHSQGRL*TLSHTP Trigger: GGGAGTGTGACTGAGGGTGCAGAGCCTCCCCTGACT...ATGCCAGCTACTCTCCCTGAAACTTACCTGCTCCATGAGAATTGTTTGCTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
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3UTR-3UTR GCA 90 bp | CCAGTGACACTCTGCTATAGGAAACTGATTTCTTCTTTCCCATCAGGTATCGACAGGCCTCTCCCGACTTaGTTCTGGGCTCAGGAGACA | + |
Preference number: 2 (lower is better) Translates to: PVTLCYRKLISSFPSGIDRPLPT*FWAQET Trigger: TGTCTCCTGAGCCCAGAAGCAAGTCGGGAGAGGCCT...GTCGATACCTGATGGGAAAGAAGAAATCAGTTTCCTATAGCAGAGTGTCACTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120535.8 |
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3UTR-3UTR CCA 90 bp | CCAGTGACACTCTGCTATAGGAAACTGATTTCTTCTTTCCCATCAGGTATCGACCCCCAACATGTCCTGTaGGCCAGACAGACATGGCCA | + |
Preference number: 2 (lower is better) Translates to: PVTLCYRKLISSFPSGIDPQHVL*ARQTWP Trigger: TGGCCATGTCTGTCTGGCCCACAGGACATGTTGGGG...GTCGATACCTGATGGGAAAGAAGAAATCAGTTTCCTATAGCAGAGTGTCACTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120535.8 |
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3UTR-3UTR TCA 90 bp | CAAGGAAACCAGCTGTATGGACTGCCTTGTGCTAGGAATAAAAATCAGAAATCCGATCCATCACTACCCTaGCAGCATGTCTGGGCCCCA | + |
Preference number: 2 (lower is better) Translates to: QGNQLYGLPCARNKNQKSDPSLP*QHVWAP Trigger: TGGGGCCCAGACATGCTGTCAGGGTAGTGATGGATC...GGATTTCTGATTTTTATTCCTAGCACAAGGCAGTCCATACAGCTGGTTTCCTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
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3UTR-3UTR TCA 90 bp | GTTTGTGGCTCTCATATCTTCGCTTCCCTGAGAGAGGCTGAGAACTTCTCTTGGAGTCTGGGAAGAGAATaGGCTTTGTCTGCCAGAGAA | + |
Preference number: 2 (lower is better) Translates to: VCGSHIFASLREAENFSWSLGRE*ALSARE Trigger: TTCTCTGGCAGACAAAGCTCATTCTCTTCCCAGACT...CCAAGAGAAGTTCTCAGCCTCTCTCAGGGAAGCGAAGATATGAGAGCCACAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119311.8 |
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3UTR-3UTR CCA 90 bp | GTTTGTGGCTCTCATATCTTCGCTTCCCTGAGAGAGGCTGAGAACTTCTCTTGGCTGAGATCAATCACTTaGGTTGTGTGCGGAAAGTGC | + |
Preference number: 2 (lower is better) Translates to: VCGSHIFASLREAENFSWLRSIT*VVCGKC Trigger: GCACTTTCCGCACACAACCCAAGTGATTGATCTCAG...CCAAGAGAAGTTCTCAGCCTCTCTCAGGGAAGCGAAGATATGAGAGCCACAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119311.8 |
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3UTR-3UTR CCA 90 bp | GTTTGTGGCTCTCATATCTTCGCTTCCCTGAGAGAGGCTGAGAACTTCTCTTGGTCCGAACTCGATTGCTaGTGTATCCGTGAGGTGTTT | + |
Preference number: 2 (lower is better) Translates to: VCGSHIFASLREAENFSWSELDC*CIREVF Trigger: AAACACCTCACGGATACACCAGCAATCGAGTTCGGA...CCAAGAGAAGTTCTCAGCCTCTCTCAGGGAAGCGAAGATATGAGAGCCACAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119311.8 |
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3UTR-3UTR CCA 90 bp | TTCATTTTGTGTTGGCCAGCTGTTCCTGGGCATGGGGCCTGCCCTGGTGTGTGTACCAAGCTGATCTCTTaGTGTTTTGCTTTGTTCTTT | + |
Preference number: 2 (lower is better) Translates to: FILCWPAVPGHGACPGVCTKLIS*CFALFF Trigger: AAAGAACAAAGCAAAACACCAAGAGATCAGCTTGGT...ACACACACCAGGGCAGGCCCCATGCCCAGGAACAGCTGGCCAACACAAAATGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000120535.8 |
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3UTR CAA 90 bp | TGTGCCTGGCTTAGACTCCAGGTTTCTGGTACTGAGTCCCAAGCTTaGAACTCTGGAGTACCTTTTGTTATTCAAAGCAGCCCTTCCCAA | + |
Preference number: 2 (lower is better) Translates to: CAWLRLQVSGTESQA*NSGVPFVIQSSPSQ Trigger: TTGGGAAGGGCTGCTTTGAATAACAAAAGGTACTCCAGAGTTCAAAGCTTGGGACTCAGTACCAGAAACCTGGAGTCTAAGCCAGGCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
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3UTR CAA 90 bp | GGCTCTGGCTGTGTGTCCCTCACACAGATTCATGAGAAGCACCTCTaGAAACTGAACCCTAAAGGGAATACACACTCCCCTATCTTACAA | + |
Preference number: 2 (lower is better) Translates to: GSGCVSLTQIHEKHL*KLNPKGNTHSPILQ Trigger: TTGTAAGATAGGGGAGTGTGTATTCCCTTTAGGGTTCAGTTTCAAGAGGTGCTTCTCATGAATCTGTGTGAGGGACACACAGCCAGAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120535.8 |
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3UTR-3UTR TCA 90 bp | GCCGATTTCCAGATTTCCAGACAACACAGACTGGAGTTGCTTTCTAAACAGGTCCACTACTTGCATGACTaGTTTCTGGCTCCCAGCATC | + |
Preference number: 2 (lower is better) Translates to: ADFQISRQHRLELLSKQVHYLHD*FLAPSI Trigger: GATGCTGGGAGCCAGAAATCAGTCATGCAAGTAGTG...GACCTGTTTAGAAAGCAACTCCAGTCTGTGTTGTCTGGAAATCTGGAAATCGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119311.8 |
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3UTR-3UTR TCA 90 bp | GGCTCTCATATCTTCGCTTCCCTGAGAGAGGCTGAGAACTTCTCTTGGTTTCCCTGTGAACAGACACCATaGCCAAGGCAACTCATAAAA | + |
Preference number: 2 (lower is better) Translates to: GSHIFASLREAENFSWFPCEQTP*PRQLIK Trigger: TTTTATGAGTTGCCTTGGTCATGGTGTCTGTTCACA...GGGAAACCAAGAGAAGTTCTCAGCCTCTCTCAGGGAAGCGAAGATATGAGAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119311.8 |
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3UTR-3UTR CCA 90 bp | GCCGATTTCCAGATTTCCAGACAACACAGACTGGAGTTGCTTTCTAAACAGGTCTCTGTGGCTTCCATCTaGCAAGCCTCCTGTGCATAT | + |
Preference number: 2 (lower is better) Translates to: ADFQISRQHRLELLSKQVSVASI*QASCAY Trigger: ATATGCACAGGAGGCTTGCCAGATGGAAGCCACAGA...GACCTGTTTAGAAAGCAACTCCAGTCTGTGTTGTCTGGAAATCTGGAAATCGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119311.8 |
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3UTR-3UTR GCA 90 bp | CTTGTCCTCTTTCTGTTGGTGACTCTGGCTCTGGCTGTGTGTCCCTCACACAGAGATCTCTTGGTGTTTTaGTTTGTTCTTTTCCGTCTT | + |
Preference number: 2 (lower is better) Translates to: LVLFLLVTLALAVCPSHRDLLVF*FVLFRL Trigger: AAGACGGAAAAGAACAAAGCAAAACACCAAGAGATC...TCTGTGTGAGGGACACACAGCCAGAGCCAGAGTCACCAACAGAAAGAGGACAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120535.8 |
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3UTR-3UTR CCA 90 bp | AATAATGTTATTCCTTGGACCAAGCATATTCAAACCATCACAGTGGGTCACACCGCGGAAAGTGCTGAGTaGCCAGGCCAAAGGCAAGAT | + |
Preference number: 2 (lower is better) Translates to: NNVIPWTKHIQTITVGHTAESAE*PGQRQD Trigger: ATCTTGCCTTTGGCCTGGCCACTCAGCACTTTCCGC...GGTGTGACCCACTGTGATGGTTTGAATATGCTTGGTCCAAGGAATAACATTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119311.8 |
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3UTR-3UTR GCA 90 bp | AAAAAGCAAACAATTCTCATGGAGCAGGTAAGTTTCAGGGAGAGTAGCTGGCATGGAACTCAGGCAATGTaGAGTTCTACCACTGTGGAG | + |
Preference number: 2 (lower is better) Translates to: KKQTILMEQVSFRESSWHGTQAM*SSTTVE Trigger: CTCCACAGTGGTAGAACTGCACATTGCCTGAGTTCC...ATGCCAGCTACTCTCCCTGAAACTTACCTGCTCCATGAGAATTGTTTGCTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
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3UTR CAA 90 bp | CTCTGCGTGTTCACAGACACATCCTCCGGTGGTCTTCATTTAATGTaGACAGAACTTATTCATCTTTTCTTTCCCATTCCCCAACATGTC | + |
Preference number: 2 (lower is better) Translates to: LCVFTDTSSGGLHLM*TELIHLFFPIPQHV Trigger: GACATGTTGGGGAATGGGAAAGAAAAGATGAATAAGTTCTGTCAACATTAAATGAAGACCACCGGAGGATGTGTCTGTGAACACGCAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120535.8 |
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3UTR-3UTR CCA 90 bp | CGGCAGAAAGGATATACACATAACTGTTGTAACAAGTTTGCAAATTCAACTCATGAAGCTTCGGACAGCTaGAAGCAGAGAATGATGGCT | + |
Preference number: 2 (lower is better) Translates to: RQKGYTHNCCNKFANSTHEASDS*KQRMMA Trigger: AGCCATCATTCTCTGCTTCCAGCTGTCCGAAGCTTC...ATGAGTTGAATTTGCAAACTTGTTACAACAGTTATGTGTATATCCTTTCTGCCG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
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3UTR-3UTR CCA 90 bp | CGGCAGAAAGGATATACACATAACTGTTGTAACAAGTTTGCAAATTCAACTCATGCTTCAGCACTGGACTaGTCACTAGGGAGTAAAGCT | + |
Preference number: 2 (lower is better) Translates to: RQKGYTHNCCNKFANSTHASALD*SLGSKA Trigger: AGCTTTACTCCCTAGTGACCAGTCCAGTGCTGAAGC...ATGAGTTGAATTTGCAAACTTGTTACAACAGTTATGTGTATATCCTTTCTGCCG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
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3UTR-3UTR GCA 90 bp | CGGCAGAAAGGATATACACATAACTGTTGTAACAAGTTTGCAAATTCAACTCATACCAGCTGTATGGACTaGCTTGTGCTAGGAATAAAA | + |
Preference number: 2 (lower is better) Translates to: RQKGYTHNCCNKFANSTHTSCMD*LVLGIK Trigger: TTTTATTCCTAGCACAAGGCAGTCCATACAGCTGGT...ATGAGTTGAATTTGCAAACTTGTTACAACAGTTATGTGTATATCCTTTCTGCCG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
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3UTR GCA 72 bp | GTGGCTTCCATCTGGCAAGCCTCCTGTGCATATCAGTaGAGCAGGTCGCTAGCCCGGCAGGTCTGGGCCCTC | + |
Preference number: 3 (lower is better) Translates to: VASIWQASCAYQ*SRSLARQVWAL Trigger: GAGGGCCCAGACCTGCCGGGCTAGCGACCTGCTGCACTGATATGCACAGGAGGCTTGCCAGATGGAAGCCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119311.8 |
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3UTR CCA 72 bp | GTGTTGGCCAGCTGTTCCTGGGCATGGGGCCTGCCCTaGTGTGTGTCCGGTGTGCCCAGTGACACTCTGCTA | + |
Preference number: 3 (lower is better) Translates to: VLASCSWAWGLP*CVSGVPSDTLL Trigger: TAGCAGAGTGTCACTGGGCACACCGGACACACACCAGGGCAGGCCCCATGCCCAGGAACAGCTGGCCAACAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120535.8 |
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3UTR CCA 72 bp | GCAGCACGGGGTGGCTCTGAACCACTTCCAGCACTATaGGAGGCTGCGGCGGGCTCTCCTCCTATTCTCCCT | + |
Preference number: 3 (lower is better) Translates to: AARGGSEPLPAL*EAAAGSPPILP Trigger: AGGGAGAATAGGAGGAGAGCCCGCCGCAGCCTCCCATAGTGCTGGAAGTGGTTCAGAGCCACCCCGTGCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137064.8 |
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3UTR GCA 72 bp | CCAGGGGGTAGACTCCAGAAAGATGCAGAGGGAGGCTaGCACAGGCCTCTCCCGACTTGCTTCTGGGCTCAG | + |
Preference number: 3 (lower is better) Translates to: PGGRLQKDAEGG*HRPLPTCFWAQ Trigger: CTGAGCCCAGAAGCAAGTCGGGAGAGGCCTGTGGCAGCCTCCCTCTGCATCTTTCTGGAGTCTACCCCCTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120535.8 |
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3UTR-3UTR CAA 90 bp | GGCTTCCAGGCTGCAGCTCAGCTGTCAAGCCTCTGCGTGTTCACAGACACATCCCAGGCCTCTCCCGACTaGCTTCTGGGCTCAGGAGAC | + |
Preference number: 3 (lower is better) Translates to: GFQAAAQLSSLCVFTDTSQASPD*LLGSGD Trigger: GTCTCCTGAGCCCAGAAGCAAGTCGGGAGAGGCCTG...GGATGTGTCTGTGAACACGCAGAGGCTTGACAGCTGAGCTGCAGCCTGGAAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120535.8 |
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3UTR TCA 72 bp | ACCCGCAAGGTCCCTCCTGCTGACTCGAGCCAAGGCTaGGACCTGGCTATCTCTGCTAGGTCGTGTCACTGC | + |
Preference number: 3 (lower is better) Translates to: TRKVPPADSSQG*DLAISARSCHC Trigger: GCAGTGACACGACCTAGCAGAGATAGCCAGGTCTCAGCCTTGGCTCGAGTCAGCAGGAGGGACCTTGCGGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119311.8 |
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3UTR GCA 72 bp | ATTTTGTGTTGGCCAGCTGTTCCTGGGCATGGGGCCTaGCCTGGTGTGTGTCCGGTGTGCCCAGTGACACTC | + |
Preference number: 3 (lower is better) Translates to: ILCWPAVPGHGA*PGVCPVCPVTL Trigger: GAGTGTCACTGGGCACACCGGACACACACCAGGGCAGGCCCCATGCCCAGGAACAGCTGGCCAACACAAAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120535.8 |
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3UTR TCA 72 bp | AGGGCACAGGGCAGAAGAGGTTGTGGCCAGGGCAGATaGAACCTAACGTGCTTGGTGTCAGCTGCCCTGCTG | + |
Preference number: 3 (lower is better) Translates to: RAQGRRGCGQGR*NLTCLVSAALL Trigger: CAGCAGGGCAGCTGACACCAAGCACGTTAGGTTTCATCTGCCCTGGCCACAACCTCTTCTGCCCTGTGCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119311.8 |
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3UTR TCA 72 bp | GCGCCTCCTCCCACTCCCGTTCGCTCGGCCTTTCCATaGAGACGTGCTGACACCTCTCAGAGGCTTTCTTCA | + |
Preference number: 3 (lower is better) Translates to: APPPTPVRSAFP*RRADTSQRLSS Trigger: TGAAGAAAGCCTCTGAGAGGTGTCAGCACGTCTTCATGGAAAGGCCGAGCGAACGGGAGTGGGAGGAGGCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120535.8 |
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3UTR GCA 72 bp | GATGCAGAGGGAGGCTGCCACAGGCCTCTCCCGACTTaGTTCTGGGCTCAGGAGACAGCTTCAAAGGTTCAC | + |
Preference number: 3 (lower is better) Translates to: DAEGGCHRPLPT*FWAQETASKVH Trigger: GTGAACCTTTGAAGCTGTCTCCTGAGCCCAGAAGCAAGTCGGGAGAGGCCTGTGGCAGCCTCCCTCTGCATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120535.8 |
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3UTR-3UTR CAA 90 bp | GGGAGCACGGCAGCATCCAGGCAGACACAGGGATGGAAGAGCGGAGAGTTCTACGCTGCTGGCAGAAGATaGGCTTCTAGGCAGCTAGGA | + |
Preference number: 3 (lower is better) Translates to: GSTAASRQTQGWKSGEFYAAGRR*ASRQLG Trigger: TCCTAGCTGCCTAGAAGCCAATCTTCTGCCAGCAGC...GTAGAACTCTCCGCTCTTCCATCCCTGTGTCTGCCTGGATGCTGCCGTGCTCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119311.8 |
||
3UTR-3UTR CAA 90 bp | CAAAGAAGTCAGGGGAGGCTCTGCACCCTCAGTCACACTCCCACCTGCCCTGCCGGGGGCAACTTGGCTTaGTTTCCTGTAGCCATGATA | + |
Preference number: 3 (lower is better) Translates to: QRSQGRLCTLSHTPTCPAGGNLA*FPVAMI Trigger: TATCATGGCTACAGGAAACAAAGCCAAGTTGCCCCC...GGCAGGGCAGGTGGGAGTGTGACTGAGGGTGCAGAGCCTCCCCTGACTTCTTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
||
3UTR GCA 72 bp | CATGAGATCTGTGGCTTCCATCTGGCAAGCCTCCTGTaGATATCAGTGCAGCAGGTCGCTAGCCCGGCAGGT | + |
Preference number: 3 (lower is better) Translates to: HEICGFHLASLL*ISVQQVASPAG Trigger: ACCTGCCGGGCTAGCGACCTGCTGCACTGATATGCACAGGAGGCTTGCCAGATGGAAGCCACAGATCTCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119311.8 |
||
3UTR GCA 72 bp | CCTGGGCATGGGGCCTGCCCTGGTGTGTGTCCGGTGTaGCCAGTGACACTCTGCTATAGGAAACTGATTTCT | + |
Preference number: 3 (lower is better) Translates to: PGHGACPGVCPV*PVTLCYRKLIS Trigger: AGAAATCAGTTTCCTATAGCAGAGTGTCACTGGGCACACCGGACACACACCAGGGCAGGCCCCATGCCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120535.8 |
||
3UTR CCA 72 bp | GAGGGAGGCTGCCACAGGCCTCTCCCGACTTGCTTCTaGGCTCAGGAGACAGCTTCAAAGGTTCACCATGAA | + |
Preference number: 3 (lower is better) Translates to: EGGCHRPLPTCF*AQETASKVHHE Trigger: TTCATGGTGAACCTTTGAAGCTGTCTCCTGAGCCCAGAAGCAAGTCGGGAGAGGCCTGTGGCAGCCTCCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120535.8 |
||
3UTR GCA 72 bp | GAGGCTCTGCACCCTCAGTCACACTCCCACCTGCCCTaGCCTAAGCAACCTCACTTTTCCATGGTAAGTGAC | + |
Preference number: 3 (lower is better) Translates to: EALHPQSHSHLP*PKQPHFSMVSD Trigger: GTCACTTACCATGGAAAAGTGAGGTTGCTTAGGGCAGGGCAGGTGGGAGTGTGACTGAGGGTGCAGAGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
||
3UTR GCA 72 bp | AGCCTTCCAGACAGCGGTGATGCTGGGCAGGCGCAGTaGTCTGAGATCAATCACTTGGGTTGTGTGCGGAAA | + |
Preference number: 3 (lower is better) Translates to: SLPDSGDAGQAQ*SEINHLGCVRK Trigger: TTTCCGCACACAACCCAAGTGATTGATCTCAGAGCACTGCGCCTGCCCAGCATCACCGCTGTCTGGAAGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119311.8 |
||
3UTR CCA 72 bp | GAACCCACTCTCCACTTTGGTCACTGCAATTTCCCATaGCAGCACGGGGTGGCTCTGAACCACTTCCAGCAC | + |
Preference number: 3 (lower is better) Translates to: EPTLHFGHCNFP*QHGVALNHFQH Trigger: GTGCTGGAAGTGGTTCAGAGCCACCCCGTGCTGCCATGGGAAATTGCAGTGACCAAAGTGGAGAGTGGGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021913.16 ENSMUST00000137064.8 |
||
3UTR CCA 72 bp | CCAAACAAGATTGCCCCTCACAGGCCTGCCCTTCCGTaGGCTCTACACCCTATCTATCACGTGGACTGTCAG | + |
Preference number: 3 (lower is better) Translates to: PNKIAPHRPALP*ALHPIYHVDCQ Trigger: CTGACAGTCCACGTGATAGATAGGGTGTAGAGCCCACGGAAGGGCAGGCCTGTGAGGGGCAATCTTGTTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
||
3UTR CCA 72 bp | TGCCTGGCTTACAGGTTCAGCCCATTATCATCAAGGTaGGAGCACGGCAGCATCCAGGCAGACACAGGGATG | + |
Preference number: 3 (lower is better) Translates to: CLAYRFSPLSSR*EHGSIQADTGM Trigger: CATCCCTGTGTCTGCCTGGATGCTGCCGTGCTCCCACCTTGATGATAATGGGCTGAACCTGTAAGCCAGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119311.8 |
||
3UTR-3UTR CAA 90 bp | GGGAGCACGGCAGCATCCAGGCAGACACAGGGATGGAAGAGCGGAGAGTTCTACTCCCAGCATCATTTGTaGTTGTCAAAGACCCCTTCC | + |
Preference number: 3 (lower is better) Translates to: GSTAASRQTQGWKSGEFYSQHHL*LSKTPS Trigger: GGAAGGGGTCTTTGACAACAACAAATGATGCTGGGA...GTAGAACTCTCCGCTCTTCCATCCCTGTGTCTGCCTGGATGCTGCCGTGCTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119311.8 |
||
3UTR TCA 72 bp | AGGCTAAGGCAGCCTGGTGAAGGAGGAATGTTTCGCTaGAGCAGACACAGGAGAGGGGATGCTCTGCTGAAG | + |
Preference number: 3 (lower is better) Translates to: RLRQPGEGGMFR*SRHRRGDALLK Trigger: CTTCAGCAGAGCATCCCCTCTCCTGTGTCTGCTTCAGCGAAACATTCCTCCTTCACCAGGCTGCCTTAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119311.8 |
||
3UTR GCA 72 bp | GGTGGGCCTTCACACCTCAATTTAACCAAACAAGATTaGCCCTCACAGGCCTGCCCTTCCGTGGGCTCTACA | + |
Preference number: 3 (lower is better) Translates to: GGPSHLNLTKQD*PSQACPSVGST Trigger: TGTAGAGCCCACGGAAGGGCAGGCCTGTGAGGGGCAATCTTGTTTGGTTAAATTGAGGTGTGAAGGCCCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
||
3UTR CCA 72 bp | GATCAATCACTTGGGTTGTGTGCGGAAAGTGCTGAGTaGCCAGGCCAAAGGCAAGATGAGCCAGCAGCGTCA | + |
Preference number: 3 (lower is better) Translates to: DQSLGLCAESAE*PGQRQDEPAAS Trigger: TGACGCTGCTGGCTCATCTTGCCTTTGGCCTGGCCACTCAGCACTTTCCGCACACAACCCAAGTGATTGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119311.8 |
||
3UTR-3UTR CAA 90 bp | GGCTCTCATATCTTCGCTTCCCTGAGAGAGGCTGAGAACTTCTCTTGGTTTCCCGCTAGGATGAGGGTCTaGAAGCCCACGTCCACAGTG | + |
Preference number: 3 (lower is better) Translates to: GSHIFASLREAENFSWFPARMRV*KPTSTV Trigger: CACTGTGGACGTGGGCTTCAAGACCCTCATCCTAGC...GGGAAACCAAGAGAAGTTCTCAGCCTCTCTCAGGGAAGCGAAGATATGAGAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119311.8 |
||
3UTR TCA 72 bp | GAGACAGAGCTTGGCTTGCTGGTCCAGCTAGCTGCGTaGTGTTTGTGGCTCTCATATCTTCGCTTCCCTGAG | + |
Preference number: 3 (lower is better) Translates to: ETELGLLVQLAA*CLWLSYLRFPE Trigger: CTCAGGGAAGCGAAGATATGAGAGCCACAAACATCACGCAGCTAGCTGGACCAGCAAGCCAAGCTCTGTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119311.8 |
||
3UTR GCA 72 bp | CCAGGGCAGATGAAACCTAACGTGCTTGGTGTCAGCTaGCCTGCTGTTGCTAGGAAAGCAACTACAGACGTG | + |
Preference number: 3 (lower is better) Translates to: PGQMKPNVLGVS*PAVARKATTDV Trigger: CACGTCTGTAGTTGCTTTCCTAGCAACAGCAGGGCAGCTGACACCAAGCACGTTAGGTTTCATCTGCCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119311.8 |
||
3UTR GCA 72 bp | TGGTGTATCCGTGAGGTGTTTGCAAGTGGACCATGCTaGCACTGCCTGCTAACCTGTGAACTGAACTGCCGA | + |
Preference number: 3 (lower is better) Translates to: WCIREVFASGPC*HCLLTCELNCR Trigger: TCGGCAGTTCAGTTCACAGGTTAGCAGGCAGTGGCAGCATGGTCCACTTGCAAACACCTCACGGATACACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119311.8 |
||
3UTR GCA 72 bp | TGCTGGTGTATCCGTGAGGTGTTTGCAAGTGGACCATaGTGCCACTGCCTGCTAACCTGTGAACTGAACTGC | + |
Preference number: 3 (lower is better) Translates to: CWCIREVFASGP*CHCLLTCELNC Trigger: GCAGTTCAGTTCACAGGTTAGCAGGCAGTGGCAGCATGGTCCACTTGCAAACACCTCACGGATACACCAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119311.8 |
||
3UTR GCA 72 bp | AAATGTGTGCTTCCAAGAACTACAGGCTGCCGTGAGTaGTGGGAACCAAACTCGGGTCCTCTGCAACCTGCA | + |
Preference number: 3 (lower is better) Translates to: KCVLPRTTGCRE*WEPNSGPLQPA Trigger: TGCAGGTTGCAGAGGACCCGAGTTTGGTTCCCAGCACTCACGGCAGCCTGTAGTTCTTGGAAGCACACATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119311.8 |
||
3UTR CCA 72 bp | ATGCACTGGCAAGCTTGGTGGCTTTTACCAGCTCTCTaGTTTCCTGTCACTGCTGTGTGCTTGGGCCACTAC | + |
Preference number: 3 (lower is better) Translates to: MHWQAWWLLPAL*FPVTAVCLGHY Trigger: GTAGTGGCCCAAGCACACAGCAGTGACAGGAAACCAGAGAGCTGGTAAAAGCCACCAAGCTTGCCAGTGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
||
3UTR CCA 72 bp | ATCTCCATCCACACCATGAGATCTGTGGCTTCCATCTaGCAAGCCTCCTGTGCATATCAGTGCAGCAGGTCG | + |
Preference number: 3 (lower is better) Translates to: ISIHTMRSVASI*QASCAYQCSRS Trigger: CGACCTGCTGCACTGATATGCACAGGAGGCTTGCCAGATGGAAGCCACAGATCTCATGGTGTGGATGGAGAT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119311.8 |
||
3UTR-3UTR CAA 90 bp | TCACTAGCAGGTGATGCAAGCAGGAGCCTTCATCAGAGATCACACCTGATGGTGGATGCAGGGGGCAACTaGGCTTTGTTTCCTGTAGCC | + |
Preference number: 3 (lower is better) Translates to: SLAGDASRSLHQRSHLMVDAGGN*ALFPVA Trigger: GGCTACAGGAAACAAAGCCAAGTTGCCCCCTGCATC...CACCATCAGGTGTGATCTCTGATGAAGGCTCCTGCTTGCATCACCTGCTAGTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
||
3UTR TCA 72 bp | GCTGTGTGCTTGGGCCACTACGATATCACTAGCAGGTaGTGCAAGCAGGAGCCTTCATCAGAGATCACACCT | + |
Preference number: 3 (lower is better) Translates to: AVCLGHYDITSR*CKQEPSSEITP Trigger: AGGTGTGATCTCTGATGAAGGCTCCTGCTTGCATCACCTGCTAGTGATATCGTAGTGGCCCAAGCACACAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
||
3UTR GCA 72 bp | ACATGGCCACAGGTACGGCCTAGGCAAGCAGCCCAGTaGTTTAGTTGTGTCTCGTTAAATAAAGCCTGCACC | + |
Preference number: 3 (lower is better) Translates to: TWPQVRPRQAAQ*FSCVSLNKACT Trigger: GGTGCAGGCTTTATTTAACGAGACACAACTAAAGCACTGGGCTGCTTGCCTAGGCCGTACCTGTGGCCATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120535.8 |
||
3UTR-3UTR CAA 90 bp | AGACTGGAGTTGCTTTCTAAACAGGTCCACTTCCCCCACCCCCATCCTTTCTTTACAGGGCAGAAGAGGTaGTGGCCAGGGCAGATGAAA | + |
Preference number: 3 (lower is better) Translates to: RLELLSKQVHFPHPHPFFTGQKR*WPGQMK Trigger: TTTCATCTGCCCTGGCCACAACCTCTTCTGCCCTGT...AAAGAAAGGATGGGGGTGGGGGAAGTGGACCTGTTTAGAAAGCAACTCCAGTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000119311.8 |
||
3UTR-3UTR CAA 90 bp | GGGCCTGCTCCGGGTGTAGTGAGAACCCACTCTCCACTTTGGTCACTGCAATTTCTTCCAGTCTGTCCTTaGTTGAGATGGTCTCTTCCA | + |
Preference number: 3 (lower is better) Translates to: GPAPGVVRTHSPLWSLQFLPVCP*LRWSLP Trigger: TGGAAGAGACCATCTCAACAAAGGACAGACTGGAAG...AAATTGCAGTGACCAAAGTGGAGAGTGGGTTCTCACTACACCCGGAGCAGGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137064.8 |
||
3UTR TCA 72 bp | GTGATGCAAGCAGGAGCCTTCATCAGAGATCACACCTaGTGGTGTAGCCAGGTCCCAGACTTTCAGCTTTCA | + |
Preference number: 3 (lower is better) Translates to: VMQAGAFIRDHT*WCSQVPDFQLS Trigger: TGAAAGCTGAAAGTCTGGGACCTGGCTACACCATCAGGTGTGATCTCTGATGAAGGCTCCTGCTTGCATCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
||
3UTR TCA 72 bp | TGCAAGTGGACCATGCTGCCACTGCCTGCTAACCTGTaGACTGAACTGCCGATTTCCAGATTTCCAGACAAC | + |
Preference number: 3 (lower is better) Translates to: CKWTMLPLPANL*TELPISRFPDN Trigger: GTTGTCTGGAAATCTGGAAATCGGCAGTTCAGTTCACAGGTTAGCAGGCAGTGGCAGCATGGTCCACTTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119311.8 |
||
3UTR TCA 72 bp | TTCGCTGAAGCAGACACAGGAGAGGGGATGCTCTGCTaGAGCAAGCTCGTGAAAGGACACGTGATAAGGATT | + |
Preference number: 3 (lower is better) Translates to: FAEADTGEGMLC*SKLVKGHVIRI Trigger: AATCCTTATCACGTGTCCTTTCACGAGCTTGCTTCAGCAGAGCATCCCCTCTCCTGTGTCTGCTTCAGCGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119311.8 |
||
3UTR GCA 72 bp | CCGATTTCCAGATTTCCAGACAACACAGACTGGAGTTaGTTTCTAAACAGGTCCACTTCCCCCACCCCCATC | + |
Preference number: 3 (lower is better) Translates to: PISRFPDNTDWS*FLNRSTSPTPI Trigger: GATGGGGGTGGGGGAAGTGGACCTGTTTAGAAAGCAACTCCAGTCTGTGTTGTCTGGAAATCTGGAAATCGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000119311.8 |
||
3UTR CCA 72 bp | TGTCTAGCAGAGACTGTCCTCCCCTCAAAAATCAATTaGCGCACACCTTTAATCCCAGCACTTGGGAGGCAG | + |
Preference number: 3 (lower is better) Translates to: CLAETVLPSKIN*RTPLIPALGRQ Trigger: CTGCCTCCCAAGTGCTGGGATTAAAGGTGTGCGCCAATTGATTTTTGAGGGGAGGACAGTCTCTGCTAGACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
||
3UTR CCA 72 bp | TGTCTCAGAGGGACCCACACCAGTTCTCTAGCTCGCTaGCCAGGCCAGTATCCAAAAACTCAATTGAACTCT | + |
Preference number: 3 (lower is better) Translates to: CLRGTHTSSLAR*PGQYPKTQLNS Trigger: AGAGTTCAATTGAGTTTTTGGATACTGGCCTGGCCAGCGAGCTAGAGAACTGGTGTGGGTCCCTCTGAGACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
||
3UTR CCA 72 bp | ATTCTCATGGAGCAGGTAAGTTTCAGGGAGAGTAGCTaGCATGCACTGGCAAGCTTGGTGGCTTTTACCAGC | + |
Preference number: 3 (lower is better) Translates to: ILMEQVSFRESS*HALASLVAFTS Trigger: GCTGGTAAAAGCCACCAAGCTTGCCAGTGCATGCCAGCTACTCTCCCTGAAACTTACCTGCTCCATGAGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
||
3UTR GCA 72 bp | TGTGAGAAGAGCCTAGGAGGTACAGAGCACTGGGGGTaGAGGAGTGCTAAAAAGCAAACAATTCTCATGGAG | + |
Preference number: 3 (lower is better) Translates to: CEKSLGGTEHWG*RSAKKQTILME Trigger: CTCCATGAGAATTGTTTGCTTTTTAGCACTCCTGCACCCCCAGTGCTCTGTACCTCCTAGGCTCTTCTCACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
||
3UTR GCA 72 bp | ACCAGGACAGGTCTTGCCACTGTTGACTCGATTTGCTaGATGCATGAAGTGAGCATGATGCTGGAAACAGGA | + |
Preference number: 3 (lower is better) Translates to: TRTGLATVDSIC*MHEVSMMLETG Trigger: TCCTGTTTCCAGCATCATGCTCACTTCATGCATGCAGCAAATCGAGTCAACAGTGGCAAGACCTGTCCTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
||
3UTR GCA 72 bp | AGGACCAGGACAGGTCTTGCCACTGTTGACTCGATTTaGTGCATGCATGAAGTGAGCATGATGCTGGAAACA | + |
Preference number: 3 (lower is better) Translates to: RTRTGLATVDSI*CMHEVSMMLET Trigger: TGTTTCCAGCATCATGCTCACTTCATGCATGCAGCAAATCGAGTCAACAGTGGCAAGACCTGTCCTGGTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
||
3UTR GCA 72 bp | GCCCAGTGCTTTAGTTGTGTCTCGTTAAATAAAGCCTaGACCGTGGCTGCAGCAAGGCTTCTTGTCCTCTTT | + |
Preference number: 3 (lower is better) Translates to: AQCFSCVSLNKA*TVAAARLLVLF Trigger: AAAGAGGACAAGAAGCCTTGCTGCAGCCACGGTGCAGGCTTTATTTAACGAGACACAACTAAAGCACTGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120535.8 |
||
3UTR CCA 72 bp | GAACTGCCGATTTCCAGATTTCCAGACAACACAGACTaGAGTTGCTTTCTAAACAGGTCCACTTCCCCCACC | + |
Preference number: 3 (lower is better) Translates to: ELPISRFPDNTD*SCFLNRSTSPT Trigger: GGTGGGGGAAGTGGACCTGTTTAGAAAGCAACTCCAGTCTGTGTTGTCTGGAAATCTGGAAATCGGCAGTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119311.8 |
||
3UTR CCA 72 bp | GGGCCAAAAGTATCTTTTTGTGATGGCTTCGGCCTATaGTTGCCATTTGGAACACAAGTCTCAAGCCCTGCC | + |
Preference number: 3 (lower is better) Translates to: GPKVSFCDGFGL*LPFGTQVSSPA Trigger: GGCAGGGCTTGAGACTTGTGTTCCAAATGGCAACCATAGGCCGAAGCCATCACAAAAAGATACTTTTGGCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120535.8 |
||
3UTR-3UTR CAA 90 bp | GCTGGCATGCACTGGCAAGCTTGGTGGCTTTTACCAGCTCTCTGGTTTCCTGTCACTGTGTGTGTTTTATaGTCCCCTAACAATTCAACC | + |
Preference number: 3 (lower is better) Translates to: AGMHWQAWWLLPALWFPVTVCVL*SPNNST Trigger: GGTTGAATTGTTAGGGGACAATAAAACACACACAGT...GACAGGAAACCAGAGAGCTGGTAAAAGCCACCAAGCTTGCCAGTGCATGCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
||
3UTR-3UTR CAA 90 bp | CATGAGAAGCACCTCTTGAAACTGAACCCTAAAGGGAATACACACTCCCCTATCGGCTTCGGCCTATGGTaGCCATTTGGAACACAAGTC | + |
Preference number: 3 (lower is better) Translates to: HEKHLLKLNPKGNTHSPIGFGLW*PFGTQV Trigger: GACTTGTGTTCCAAATGGCAACCATAGGCCGAAGCC...GATAGGGGAGTGTGTATTCCCTTTAGGGTTCAGTTTCAAGAGGTGCTTCTCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120535.8 |
||
3UTR TCA 72 bp | CATGTCTCTCCAAGTGGCTTGAGGCCACTACTTGCATaGCTGATTTCTGGCTCCCAGCATCATTTGTTGTTG | + |
Preference number: 3 (lower is better) Translates to: HVSPSGLRPLLA*LISGSQHHLLL Trigger: CAACAACAAATGATGCTGGGAGCCAGAAATCAGTCATGCAAGTAGTGGCCTCAAGCCACTTGGAGAGACATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119311.8 |
||
3UTR TCA 72 bp | CTTAAAAGCAAGAAGACCTTCCAGTCTGTCCTTTGTTaGGATGGTCTCTTCCAGAATGTCACTGGGCGTCGG | + |
Preference number: 3 (lower is better) Translates to: LKSKKTFQSVLC*DGLFQNVTGRR Trigger: CCGACGCCCAGTGACATTCTGGAAGAGACCATCTCAACAAAGGACAGACTGGAAGGTCTTCTTGCTTTTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137064.8 |
||
3UTR CCA 72 bp | GACATTTGTGAGAAGAGCCTAGGAGGTACAGAGCACTaGGGGTGCAGGAGTGCTAAAAAGCAAACAATTCTC | + |
Preference number: 3 (lower is better) Translates to: DICEKSLGGTEH*GCRSAKKQTIL Trigger: GAGAATTGTTTGCTTTTTAGCACTCCTGCACCCCCAGTGCTCTGTACCTCCTAGGCTCTTCTCACAAATGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
||
3UTR CCA 72 bp | AAGTGGCTTGAGGCCACTACTTGCATGACTGATTTCTaGCTCCCAGCATCATTTGTTGTTGTCAAAGACCCC | + |
Preference number: 3 (lower is better) Translates to: KWLEATTCMTDF*LPASFVVVKDP Trigger: GGGGTCTTTGACAACAACAAATGATGCTGGGAGCCAGAAATCAGTCATGCAAGTAGTGGCCTCAAGCCACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119311.8 |
||
3UTR CCA 72 bp | TTATTCCTTGGACCAAGCATATTCAAACCATCACAGTaGGTCACACCCAGTCTCTCTAGGCAGGCCTGTGAT | + |
Preference number: 3 (lower is better) Translates to: LFLGPSIFKPSQ*VTPSLSRQACD Trigger: ATCACAGGCCTGCCTAGAGAGACTGGGTGTGACCCACTGTGATGGTTTGAATATGCTTGGTCCAAGGAATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119311.8 |
||
3UTR CCA 72 bp | ACCTCTGAGGACCAAAGTGGAAACTTAAGGGTTCTTTaGAAAGTCGGTTGGATGGTGTTTAGCTGGGGCAGA | + |
Preference number: 3 (lower is better) Translates to: TSEDQSGNLRVL*KVGWMVFSWGR Trigger: TCTGCCCCAGCTAAACACCATCCAACCGACTTTCCAAAGAACCCTTAAGTTTCCACTTTGGTCCTCAGAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119311.8 |
||
3UTR GCA 72 bp | CACTCACTAAAAACAACTCAAGGAACTCAGGCAATGTaGAGTTCTACCACTGTGGAGGCAAGCCTCAGAAAC | + |
Preference number: 3 (lower is better) Translates to: HSLKTTQGTQAM*SSTTVEASLRN Trigger: GTTTCTGAGGCTTGCCTCCACAGTGGTAGAACTGCACATTGCCTGAGTTCCTTGAGTTGTTTTTAGTGAGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
||
3UTR CCA 72 bp | AGAAATAACAGCCTATGGCATAGTGAAAGCTGTGCCTaGCTTAGACTCCAGGTTTCTGGTACTGAGTCCCAA | + |
Preference number: 3 (lower is better) Translates to: RNNSLWHSESCA*LRLQVSGTESQ Trigger: TTGGGACTCAGTACCAGAAACCTGGAGTCTAAGCCAGGCACAGCTTTCACTATGCCATAGGCTGTTATTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
||
3UTR GCA 72 bp | GTAAGTGACTTTCTAGCTTCTAAATCCTACAGCAGATaGAGGGGGCAACTTGGCTTTGTTTCCTGTAGCCAT | + |
Preference number: 3 (lower is better) Translates to: VSDFLASKSYSR*RGQLGFVSCSH Trigger: ATGGCTACAGGAAACAAAGCCAAGTTGCCCCCTGCATCTGCTGTAGGATTTAGAAGCTAGAAAGTCACTTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
||
3UTR GCA 72 bp | CAGATACTGCGACTATCTGAAGTACATGATCTGAGGTaGTTCCTAAAATGTGAGGGCATCAAGGAAACCAGC | + |
Preference number: 3 (lower is better) Translates to: QILRLSEVHDLR*FLKCEGIKETS Trigger: GCTGGTTTCCTTGATGCCCTCACATTTTAGGAAGCACCTCAGATCATGTACTTCAGATAGTCGCAGTATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
||
3UTR GCA 72 bp | CAAAAGTATCTTTTTGTGATGGCTTCGGCCTATGGTTaGCATTTGGAACACAAGTCTCAAGCCCTGCCATCT | + |
Preference number: 3 (lower is better) Translates to: QKYLFVMASAYG*HLEHKSQALPS Trigger: AGATGGCAGGGCTTGAGACTTGTGTTCCAAATGGCAACCATAGGCCGAAGCCATCACAAAAAGATACTTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120535.8 |
||
3UTR TCA 72 bp | TTAGACTCCAGGTTTCTGGTACTGAGTCCCAAGCTTTaGACTCTGGAGTACCTTTTGTTATTCAAAGCAGCC | + |
Preference number: 3 (lower is better) Translates to: LDSRFLVLSPKL*TLEYLLLFKAA Trigger: GGCTGCTTTGAATAACAAAAGGTACTCCAGAGTTCAAAGCTTGGGACTCAGTACCAGAAACCTGGAGTCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
||
3UTR CCA 72 bp | CCAAGGCAACTCATAAAAACAACACTTAATTGTGCCTaGCTTACAGGTTCAGCCCATTATCATCAAGGTGGG | + |
Preference number: 3 (lower is better) Translates to: PRQLIKTTLNCA*LTGSAHYHQGG Trigger: CCCACCTTGATGATAATGGGCTGAACCTGTAAGCCAGGCACAATTAAGTGTTGTTTTTATGAGTTGCCTTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119311.8 |
||
3UTR-3UTR CAA 90 bp | TGGTTGCCATTTGGAACACAAGTCTCAAGCCCTGCCATCTTACCACAATGTTCTAACCAAGCTGATCTCTaGGTGTTTTGCTTTGTTCTT | + |
Preference number: 3 (lower is better) Translates to: WLPFGTQVSSPAILPQCSNQADL*VFCFVL Trigger: AAGAACAAAGCAAAACACCAAGAGATCAGCTTGGTT...AGAACATTGTGGTAAGATGGCAGGGCTTGAGACTTGTGTTCCAAATGGCAACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120535.8 |
||
3UTR TCA 72 bp | CAAATCCTAAGAACAATTCATACTTCTGACCAACCATaGTATAAATGTGGGGTTTCCCTCAAAGCCCTGCCC | + |
Preference number: 3 (lower is better) Translates to: QILRTIHTSDQP*YKCGVSLKALP Trigger: GGGCAGGGCTTTGAGGGAAACCCCACATTTATATCATGGTTGGTCAGAAGTATGAATTGTTCTTAGGATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
||
3UTR TCA 72 bp | TACACTATTACTTCCAGGGCCAAAAGTATCTTTTTGTaGTGGCTTCGGCCTATGGTTGCCATTTGGAACACA | + |
Preference number: 3 (lower is better) Translates to: YTITSRAKSIFL*WLRPMVAIWNT Trigger: TGTGTTCCAAATGGCAACCATAGGCCGAAGCCATCACAAAAAGATACTTTTGGCCCTGGAAGTAATAGTGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120535.8 |
||
3UTR GCA 72 bp | AACCATGATATAAATGTGGGGTTTCCCTCAAAGCCCTaGCCAAACTCACTCACTAAAAACAACTCAAGGAAC | + |
Preference number: 3 (lower is better) Translates to: NHDINVGFPSKP*PNSLTKNNSRN Trigger: GTTCCTTGAGTTGTTTTTAGTGAGTGAGTTTGGGCAGGGCTTTGAGGGAAACCCCACATTTATATCATGGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
||
3UTR GCA 72 bp | GAAAGGACACGTGATAAGGATTCTTTGCTAATGACATaGGTGTATTGGTCCACCTTACACTGTGTAGTTGAG | + |
Preference number: 3 (lower is better) Translates to: ERTRDKDSLLMT*VYWSTLHCVVE Trigger: CTCAACTACACAGTGTAAGGTGGACCAATACACGCATGTCATTAGCAAAGAATCCTTATCACGTGTCCTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119311.8 |
||
3UTR CCA 72 bp | TCTAACAAGGCCACACCTCCTAATAATGTTATTCCTTaGACCAAGCATATTCAAACCATCACAGTGGGTCAC | + |
Preference number: 3 (lower is better) Translates to: SNKATPPNNVIP*TKHIQTITVGH Trigger: GTGACCCACTGTGATGGTTTGAATATGCTTGGTCCAAGGAATAACATTATTAGGAGGTGTGGCCTTGTTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119311.8 |
||
3UTR TCA 72 bp | AAAATGATAGACAGACAGATAGACCAACTCACCGACTaGCCAACCATTAAGTTCATTTTGTGTTGGCCAGCT | + |
Preference number: 3 (lower is better) Translates to: KMIDRQIDQLTD*PTIKFILCWPA Trigger: AGCTGGCCAACACAAAATGAACTTAATGGTTGGTCAGTCGGTGAGTTGGTCTATCTGTCTGTCTATCATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120535.8 |
||
3UTR GCA 72 bp | AAATGTGAGGGCATCAAGGAAACCAGCTGTATGGACTaGCTTGTGCTAGGAATAAAAATCAGAAATCCACAA | + |
Preference number: 3 (lower is better) Translates to: KCEGIKETSCMD*LVLGIKIRNPQ Trigger: TTGTGGATTTCTGATTTTTATTCCTAGCACAAGGCAGTCCATACAGCTGGTTTCCTTGATGCCCTCACATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
||
CDS-3UTR GCA 90 bp | GCACGGGGTGGCTCTGAACCACTTCCAGCACTATGGGAGGCTGCGGCGGGCTCTCGCCTTCCTGTAGGCTaGATCCCCTTCCTGGTTCTG | + |
Preference number: 4 (lower is better) Translates to: ARGGSEPLPALWEAAAGSRLPVG*IPFLVL Trigger: CAGAACCAGGAAGGGGATGCAGCCTACAGGAAGGCG...AGAGCCCGCCGCAGCCTCCCATAGTGCTGGAAGTGGTTCAGAGCCACCCCGTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021913.16 ENSMUST00000137064.8 |
||
3UTR CAA 72 bp | GCCTGCTCCGGGTGTAGTGAGAACCCACTCTCCACTTaGGTCACTGCAATTTCCCATGGCAGCACGGGGTGG | + |
Preference number: 4 (lower is better) Translates to: ACSGCSENPLST*VTAISHGSTGW Trigger: CCACCCCGTGCTGCCATGGGAAATTGCAGTGACCAAAGTGGAGAGTGGGTTCTCACTACACCCGGAGCAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021913.16 ENSMUST00000137064.8 |
||
3UTR CAA 72 bp | GATGCTGGGCAGGCGCAGTGCTCTGAGATCAATCACTaGGGTTGTGTGCGGAAAGTGCTGAGTGGCCAGGCC | + |
Preference number: 4 (lower is better) Translates to: DAGQAQCSEINH*GCVRKVLSGQA Trigger: GGCCTGGCCACTCAGCACTTTCCGCACACAACCCAAGTGATTGATCTCAGAGCACTGCGCCTGCCCAGCATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119311.8 |
||
CDS-3UTR CCA 90 bp | CGGGGTGGCTCTGAACCACTTCCAGCACTATGGGAGGCTGCGGCGGGCTCTCCTTCACCGATCGGATCTTaGAGACAAAGGGACCAACTT | + |
Preference number: 4 (lower is better) Translates to: RGGSEPLPALWEAAAGSPSPIGS*RQRDQL Trigger: AAGTTGGTCCCTTTGTCTCCAAGATCCGATCGGTGA...AGGAGAGCCCGCCGCAGCCTCCCATAGTGCTGGAAGTGGTTCAGAGCCACCCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021913.16 ENSMUST00000137064.8 |
||
CDS-3UTR GCA 90 bp | GCACGGGGTGGCTCTGAACCACTTCCAGCACTATGGGAGGCTGCGGCGGGCTCTCCAACTTCACTGGAATaGATCTTGGCTCGTTCCTTA | + |
Preference number: 4 (lower is better) Translates to: ARGGSEPLPALWEAAAGSPTSLE*ILARSL Trigger: TAAGGAACGAGCCAAGATGCATTCCAGTGAAGTTGG...AGAGCCCGCCGCAGCCTCCCATAGTGCTGGAAGTGGTTCAGAGCCACCCCGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021913.16 ENSMUST00000137064.8 |
||
CDS-3UTR GCA 90 bp | GTAGTGAGAACCCACTCTCCACTTTGGTCACTGCAATTTCCCATGGCAGCACGGAAGGCCGTCTATGGCTaGGATGGTGGGCACCGGGAG | + |
Preference number: 4 (lower is better) Translates to: VVRTHSPLWSLQFPMAARKAVYG*DGGHRE Trigger: CTCCCGGTGCCCACCATCGCAGCCATAGACGGCCTT...CCGTGCTGCCATGGGAAATTGCAGTGACCAAAGTGGAGAGTGGGTTCTCACTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021913.16 ENSMUST00000137064.8 |
||
CDS-3UTR GCA 90 bp | ATGGTCTCTTCCAGAATGTCACTGGGCGTCGGGAGTCACTCAGTAGCCAGTACTAAGGCCGTCTATGGCTaGGATGGTGGGCACCGGGAG | + |
Preference number: 4 (lower is better) Translates to: MVSSRMSLGVGSHSVASTKAVYG*DGGHRE Trigger: CTCCCGGTGCCCACCATCGCAGCCATAGACGGCCTT...AGTACTGGCTACTGAGTGACTCCCGACGCCCAGTGACATTCTGGAAGAGACCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137064.8 |
||
CDS-3UTR CCA 90 bp | CGGGGTGGCTCTGAACCACTTCCAGCACTATGGGAGGCTGCGGCGGGCTCTCCTTTCTGTTCTAACACATaGCTGATCAAGCCCACAGCT | + |
Preference number: 4 (lower is better) Translates to: RGGSEPLPALWEAAAGSPFCSNT*LIKPTA Trigger: AGCTGTGGGCTTGATCAGCCATGTGTTAGAACAGAA...AGGAGAGCCCGCCGCAGCCTCCCATAGTGCTGGAAGTGGTTCAGAGCCACCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021913.16 ENSMUST00000137064.8 |
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3UTR CAA 72 bp | AGATGCAGAGGGAGGCTGCCACAGGCCTCTCCCGACTaGCTTCTGGGCTCAGGAGACAGCTTCAAAGGTTCA | + |
Preference number: 4 (lower is better) Translates to: RCRGRLPQASPD*LLGSGDSFKGS Trigger: TGAACCTTTGAAGCTGTCTCCTGAGCCCAGAAGCAAGTCGGGAGAGGCCTGTGGCAGCCTCCCTCTGCATCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120535.8 |
||
CDS-3UTR GCA 90 bp | GCACGGGGTGGCTCTGAACCACTTCCAGCACTATGGGAGGCTGCGGCGGGCTCTTCCGCCAGGAATAATTaGCAACTTTGTTTCAACCAG | + |
Preference number: 4 (lower is better) Translates to: ARGGSEPLPALWEAAAGSSARNN*QLCFNQ Trigger: CTGGTTGAAACAAAGTTGGCAATTATTCCTGGCGGA...AGAGCCCGCCGCAGCCTCCCATAGTGCTGGAAGTGGTTCAGAGCCACCCCGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021913.16 ENSMUST00000137064.8 |
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CDS-3UTR CCA 90 bp | GTAGTGAGAACCCACTCTCCACTTTGGTCACTGCAATTTCCCATGGCAGCACGGCGTCTATGGCTGCGATaGTGGGCACCGGGAGGTTTG | + |
Preference number: 4 (lower is better) Translates to: VVRTHSPLWSLQFPMAARRLWLR*WAPGGL Trigger: CAAACCTCCCGGTGCCCACCATCGCAGCCATAGACG...CCGTGCTGCCATGGGAAATTGCAGTGACCAAAGTGGAGAGTGGGTTCTCACTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021913.16 ENSMUST00000137064.8 |
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CDS-3UTR CCA 90 bp | TCACTGGGCGTCGGGAGTCACTCAGTAGCCAGTACTTTCAGACTGAAACCTTCCCGTCTATGGCTGCGATaGTGGGCACCGGGAGGTTTG | + |
Preference number: 4 (lower is better) Translates to: SLGVGSHSVASTFRLKPSRLWLR*WAPGGL Trigger: CAAACCTCCCGGTGCCCACCATCGCAGCCATAGACG...GGAAGGTTTCAGTCTGAAAGTACTGGCTACTGAGTGACTCCCGACGCCCAGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137064.8 |
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3UTR CAA 72 bp | GGGTGGGCCTTCACACCTCAATTTAACCAAACAAGATaGCCCCTCACAGGCCTGCCCTTCCGTGGGCTCTAC | + |
Preference number: 4 (lower is better) Translates to: GWAFTPQFNQTR*PLTGLPFRGLY Trigger: GTAGAGCCCACGGAAGGGCAGGCCTGTGAGGGGCAATCTTGTTTGGTTAAATTGAGGTGTGAAGGCCCACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
||
CDS-3UTR GCA 90 bp | CCGGGTGTAGTGAGAACCCACTCTCCACTTTGGTCACTGCAATTTCCCATGGCACGCCTTCCTGTAGGCTaGATCCCCTTCCTGGTTCTG | + |
Preference number: 4 (lower is better) Translates to: PGVVRTHSPLWSLQFPMARLPVG*IPFLVL Trigger: CAGAACCAGGAAGGGGATGCAGCCTACAGGAAGGCG...TGCCATGGGAAATTGCAGTGACCAAAGTGGAGAGTGGGTTCTCACTACACCCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021913.16 ENSMUST00000137064.8 |
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CDS-3UTR TCA 90 bp | CACTCTCCACTTTGGTCACTGCAATTTCCCATGGCAGCACGGGGTGGCTCTGAAACAGCTTTGGCTTCTTaGCCGTCAAGAACTCGGGCA | + |
Preference number: 4 (lower is better) Translates to: HSPLWSLQFPMAARGGSETALAS*PSRTRA Trigger: TGCCCGAGTTCTTGACGGTCAAGAAGCCAAAGCTGT...TTCAGAGCCACCCCGTGCTGCCATGGGAAATTGCAGTGACCAAAGTGGAGAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021913.16 ENSMUST00000137064.8 |
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CDS-3UTR TCA 90 bp | ACCCACTCTCCACTTTGGTCACTGCAATTTCCCATGGCAGCACGGGGTGGCTCTGTTCTAACACATGGCTaGTCAAGCCCACAGCTTTGG | + |
Preference number: 4 (lower is better) Translates to: THSPLWSLQFPMAARGGSVLTHG*SSPQLW Trigger: CCAAAGCTGTGGGCTTGATCAGCCATGTGTTAGAAC...AGAGCCACCCCGTGCTGCCATGGGAAATTGCAGTGACCAAAGTGGAGAGTGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021913.16 ENSMUST00000137064.8 |
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CDS-3UTR CCA 90 bp | AGACTCCAGAAAGATGCAGAGGGAGGCTGCCACAGGCCTCTCCCGACTTGCTTCTCACCGATCGGATCTTaGAGACAAAGGGACCAACTT | + |
Preference number: 4 (lower is better) Translates to: RLQKDAEGGCHRPLPTCFSPIGS*RQRDQL Trigger: AAGTTGGTCCCTTTGTCTCCAAGATCCGATCGGTGA...GAAGCAAGTCGGGAGAGGCCTGTGGCAGCCTCCCTCTGCATCTTTCTGGAGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120535.8 |
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CDS-3UTR TCA 90 bp | GGGTGTAGTGAGAACCCACTCTCCACTTTGGTCACTGCAATTTCCCATGGCAGCACAGCTTTGGCTTCTTaGCCGTCAAGAACTCGGGCA | + |
Preference number: 4 (lower is better) Translates to: GCSENPLSTLVTAISHGSTALAS*PSRTRA Trigger: TGCCCGAGTTCTTGACGGTCAAGAAGCCAAAGCTGT...GCTGCCATGGGAAATTGCAGTGACCAAAGTGGAGAGTGGGTTCTCACTACACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021913.16 ENSMUST00000137064.8 |
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CDS-3UTR TCA 90 bp | GGGCCTGCTCCGGGTGTAGTGAGAACCCACTCTCCACTTTGGTCACTGCAATTTGTTCTAACACATGGCTaGTCAAGCCCACAGCTTTGG | + |
Preference number: 4 (lower is better) Translates to: GPAPGVVRTHSPLWSLQFVLTHG*SSPQLW Trigger: CCAAAGCTGTGGGCTTGATCAGCCATGTGTTAGAAC...AAATTGCAGTGACCAAAGTGGAGAGTGGGTTCTCACTACACCCGGAGCAGGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021913.16 ENSMUST00000137064.8 |
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CDS-3UTR CCA 90 bp | GGCGTCGGGAGTCACTCAGTAGCCAGTACTTTCAGACTGAAACCTTCCCTGGAGGCTGCATCCCCTTCCTaGTTCTGTTCTAACACATGG | + |
Preference number: 4 (lower is better) Translates to: GVGSHSVASTFRLKPSLEAASPS*FCSNTW Trigger: CCATGTGTTAGAACAGAACCAGGAAGGGGATGCAGC...CTCCAGGGAAGGTTTCAGTCTGAAAGTACTGGCTACTGAGTGACTCCCGACGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137064.8 |
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CDS-3UTR GCA 90 bp | ATGGTCTCTTCCAGAATGTCACTGGGCGTCGGGAGTCACTCAGTAGCCAGTACTAACCAGGCCCATTTTTaGAGAGGAAGCTGCTACTCG | + |
Preference number: 4 (lower is better) Translates to: MVSSRMSLGVGSHSVASTNQAHF*RGSCYS Trigger: CGAGTAGCAGCTTCCTCTGCAAAAATGGGCCTGGTT...AGTACTGGCTACTGAGTGACTCCCGACGCCCAGTGACATTCTGGAAGAGACCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137064.8 |
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CDS-3UTR CCA 90 bp | CACTCTCCACTTTGGTCACTGCAATTTCCCATGGCAGCACGGGGTGGCTCTGAAAGGGACCAACTTCACTaGAATGCATCTTGGCTCGTT | + |
Preference number: 4 (lower is better) Translates to: HSPLWSLQFPMAARGGSERDQLH*NASWLV Trigger: AACGAGCCAAGATGCATTCCAGTGAAGTTGGTCCCT...TTCAGAGCCACCCCGTGCTGCCATGGGAAATTGCAGTGACCAAAGTGGAGAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021913.16 ENSMUST00000137064.8 |
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CDS-3UTR CCA 90 bp | GGGTGTAGTGAGAACCCACTCTCCACTTTGGTCACTGCAATTTCCCATGGCAGCGCTGCATCCCCTTCCTaGTTCTGTTCTAACACATGG | + |
Preference number: 4 (lower is better) Translates to: GCSENPLSTLVTAISHGSAASPS*FCSNTW Trigger: CCATGTGTTAGAACAGAACCAGGAAGGGGATGCAGC...GCTGCCATGGGAAATTGCAGTGACCAAAGTGGAGAGTGGGTTCTCACTACACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021913.16 ENSMUST00000137064.8 |
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CDS-3UTR GCA 90 bp | TGCTCCGGGTGTAGTGAGAACCCACTCTCCACTTTGGTCACTGCAATTTCCCATAACCAGGCCCATTTTTaGAGAGGAAGCTGCTACTCG | + |
Preference number: 4 (lower is better) Translates to: CSGCSENPLSTLVTAISHNQAHF*RGSCYS Trigger: CGAGTAGCAGCTTCCTCTGCAAAAATGGGCCTGGTT...ATGGGAAATTGCAGTGACCAAAGTGGAGAGTGGGTTCTCACTACACCCGGAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021913.16 ENSMUST00000137064.8 |
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CDS-3UTR GCA 90 bp | GCTGGCATGCACTGGCAAGCTTGGTGGCTTTTACCAGCTCTCTGGTTTCCTGTCCGGCCACCAAAAAGGTaGAAATTGGAAACAAAGCTG | + |
Preference number: 4 (lower is better) Translates to: AGMHWQAWWLLPALWFPVRPPKR*KLETKL Trigger: CAGCTTTGTTTCCAATTTGCACCTTTTTGGTGGCCG...GACAGGAAACCAGAGAGCTGGTAAAAGCCACCAAGCTTGCCAGTGCATGCCAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
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CDS-3UTR CCA 90 bp | TTGGTGACTCTGGCTCTGGCTGTGTGTCCCTCACACAGATTCATGAGAAGCACCAGGGACCAACTTCACTaGAATGCATCTTGGCTCGTT | + |
Preference number: 4 (lower is better) Translates to: LVTLALAVCPSHRFMRSTRDQLH*NASWLV Trigger: AACGAGCCAAGATGCATTCCAGTGAAGTTGGTCCCT...GGTGCTTCTCATGAATCTGTGTGAGGGACACACAGCCAGAGCCAGAGTCACCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120535.8 |
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CDS-3UTR CCA 90 bp | GTAGTGAGAACCCACTCTCCACTTTGGTCACTGCAATTTCCCATGGCAGCACGGTCGACCTCCATCCCTTaGTTAATTGCTAGTTTGGCC | + |
Preference number: 4 (lower is better) Translates to: VVRTHSPLWSLQFPMAARSTSIP*LIASLA Trigger: GGCCAAACTAGCAATTAACCAAGGGATGGAGGTCGA...CCGTGCTGCCATGGGAAATTGCAGTGACCAAAGTGGAGAGTGGGTTCTCACTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021913.16 ENSMUST00000137064.8 |
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CDS-3UTR CCA 90 bp | CACTCTCCACTTTGGTCACTGCAATTTCCCATGGCAGCACGGGGTGGCTCTGAATGTCCTTTGTTGAGATaGTCTGAGCATAGCAGGCTT | + |
Preference number: 4 (lower is better) Translates to: HSPLWSLQFPMAARGGSECPLLR*SEHSRL Trigger: AAGCCTGCTATGCTCAGACCATCTCAACAAAGGACA...TTCAGAGCCACCCCGTGCTGCCATGGGAAATTGCAGTGACCAAAGTGGAGAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021913.16 |
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3UTR CAA 72 bp | CTGTCTAGCAGAGACTGTCCTCCCCTCAAAAATCAATaGGCGCACACCTTTAATCCCAGCACTTGGGAGGCA | + |
Preference number: 4 (lower is better) Translates to: LSSRDCPPLKNQ*AHTFNPSTWEA Trigger: TGCCTCCCAAGTGCTGGGATTAAAGGTGTGCGCCAATTGATTTTTGAGGGGAGGACAGTCTCTGCTAGACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
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3UTR CAA 72 bp | GACTTCTGTGGAGGTGAGAAAGGACCAGGACAGGTCTaGCCACTGTTGACTCGATTTGCTGCATGCATGAAG | + |
Preference number: 4 (lower is better) Translates to: DFCGGEKGPGQV*PLLTRFAACMK Trigger: CTTCATGCATGCAGCAAATCGAGTCAACAGTGGCAAGACCTGTCCTGGTCCTTTCTCACCTCCACAGAAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110031.4 ENSMUST00000230563.2 |
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3UTR CAA 72 bp | GCCGATTTCCAGATTTCCAGACAACACAGACTGGAGTaGCTTTCTAAACAGGTCCACTTCCCCCACCCCCAT | + |
Preference number: 4 (lower is better) Translates to: ADFQISRQHRLE*LSKQVHFPHPH Trigger: ATGGGGGTGGGGGAAGTGGACCTGTTTAGAAAGCAACTCCAGTCTGTGTTGTCTGGAAATCTGGAAATCGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000119311.8 |
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CDS-3UTR GCA 90 bp | CACTCTCCACTTTGGTCACTGCAATTTCCCATGGCAGCACGGGGTGGCTCTGAATCCGCCAGGAATAATTaGCAACTTTGTTTCAACCAG | + |
Preference number: 4 (lower is better) Translates to: HSPLWSLQFPMAARGGSESARNN*QLCFNQ Trigger: CTGGTTGAAACAAAGTTGGCAATTATTCCTGGCGGA...TTCAGAGCCACCCCGTGCTGCCATGGGAAATTGCAGTGACCAAAGTGGAGAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021913.16 ENSMUST00000137064.8 |
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CDS-3UTR CCA 90 bp | TCTTCCAGAATGTCACTGGGCGTCGGGAGTCACTCAGTAGCCAGTACTTTCAGAAGGGACCAACTTCACTaGAATGCATCTTGGCTCGTT | + |
Preference number: 4 (lower is better) Translates to: SSRMSLGVGSHSVASTFRRDQLH*NASWLV Trigger: AACGAGCCAAGATGCATTCCAGTGAAGTTGGTCCCT...TCTGAAAGTACTGGCTACTGAGTGACTCCCGACGCCCAGTGACATTCTGGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137064.8 |
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CDS-3UTR CCA 90 bp | TGTAGTGAGAACCCACTCTCCACTTTGGTCACTGCAATTTCCCATGGCAGCACGTCGACCTCCATCCCTTaGTTAATTGCTAGTTTGGCC | + |
Preference number: 4 (lower is better) Translates to: CSENPLSTLVTAISHGSTSTSIP*LIASLA Trigger: GGCCAAACTAGCAATTAACCAAGGGATGGAGGTCGA...CGTGCTGCCATGGGAAATTGCAGTGACCAAAGTGGAGAGTGGGTTCTCACTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021913.16 ENSMUST00000137064.8 |
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CDS-3UTR CCA 90 bp | CCTGCTCCGGGTGTAGTGAGAACCCACTCTCCACTTTGGTCACTGCAATTTCCCAGCAGGCTTCTTCTATaGCTAACCCTGTTACTAAGT | + |
Preference number: 4 (lower is better) Translates to: PAPGVVRTHSPLWSLQFPSRLLL*LTLLLS Trigger: ACTTAGTAACAGGGTTAGCCATAGAAGAAGCCTGCT...GGGAAATTGCAGTGACCAAAGTGGAGAGTGGGTTCTCACTACACCCGGAGCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021913.16 ENSMUST00000137064.8 |
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CDS-3UTR CCA 90 bp | TCTTCCAGAATGTCACTGGGCGTCGGGAGTCACTCAGTAGCCAGTACTTTCAGATTCTGTTCTAACACATaGCTGATCAAGCCCACAGCT | + |
Preference number: 4 (lower is better) Translates to: SSRMSLGVGSHSVASTFRFCSNT*LIKPTA Trigger: AGCTGTGGGCTTGATCAGCCATGTGTTAGAACAGAA...TCTGAAAGTACTGGCTACTGAGTGACTCCCGACGCCCAGTGACATTCTGGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137064.8 |
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CDS-3UTR CCA 90 bp | GGGTGTAGTGAGAACCCACTCTCCACTTTGGTCACTGCAATTTCCCATGGCAGCAGCAGGCTTCTTCTATaGCTAACCCTGTTACTAAGT | + |
Preference number: 4 (lower is better) Translates to: GCSENPLSTLVTAISHGSSRLLL*LTLLLS Trigger: ACTTAGTAACAGGGTTAGCCATAGAAGAAGCCTGCT...GCTGCCATGGGAAATTGCAGTGACCAAAGTGGAGAGTGGGTTCTCACTACACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021913.16 ENSMUST00000137064.8 |
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CDS-3UTR TCA 90 bp | AAACAGGAAGGCAAAGATGCTGGGAAACACAGCTCCCTCGCAGATACTGCGACTATGTCAGCCTTCAGCTaGAAAGAAACAGCACAGAAT | + |
Preference number: 4 (lower is better) Translates to: KQEGKDAGKHSSLADTATMSAFS*KETAQN Trigger: ATTCTGTGCTGTTTCTTTTCAGCTGAAGGCTGACAT...AGTCGCAGTATCTGCGAGGGAGCTGTGTTTCCCAGCATCTTTGCCTTCCTGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
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CDS-3UTR CCA 90 bp | TTCCGTGGGCTCTACACCCTATCTATCACGTGGACTGTCAGCACGGCTGTCTCACAAAAAGGTGCAAATTaGAAACAAAGCTGGATGTCA | + |
Preference number: 4 (lower is better) Translates to: FRGLYTLSITWTVSTAVSQKGAN*KQSWMS Trigger: TGACATCCAGCTTTGTTTCCAATTTGCACCTTTTTG...TGAGACAGCCGTGCTGACAGTCCACGTGATAGATAGGGTGTAGAGCCCACGGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
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CDS-3UTR GCA 90 bp | GTGAGAACCCACTCTCCACTTTGGTCACTGCAATTTCCCATGGCAGCACGGGGTGAGATTTTTACTGAGTaGATTTTTCCCATAAGCTCT | + |
Preference number: 4 (lower is better) Translates to: VRTHSPLWSLQFPMAARGEIFTE*IFPISS Trigger: AGAGCTTATGGGAAAAATGCACTCAGTAAAAATCTC...ACCCCGTGCTGCCATGGGAAATTGCAGTGACCAAAGTGGAGAGTGGGTTCTCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000021913.16 |
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3UTR CAA 72 bp | ATAAATCTGAATAAATATGACATGGCGCACAGTGGCTaGAGTACAGATGGGCCTGCTCCGGGTGTAGTGAGA | + |
Preference number: 4 (lower is better) Translates to: INLNKYDMAHSG*STDGPAPGVVR Trigger: TCTCACTACACCCGGAGCAGGCCCATCTGTACTCAAGCCACTGTGCGCCATGTCATATTTATTCAGATTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021913.16 ENSMUST00000137064.8 |
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3UTR CAA 72 bp | CTAAATCCTACAGCAGATGCAGGGGGCAACTTGGCTTaGTTTCCTGTAGCCATGATAAAATGCCTCGAGGAA | + |
Preference number: 4 (lower is better) Translates to: LNPTADAGGNLA*FPVAMIKCLEE Trigger: TTCCTCGAGGCATTTTATCATGGCTACAGGAAACAAAGCCAAGTTGCCCCCTGCATCTGCTGTAGGATTTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
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3UTR CAA 72 bp | TATCTTTTTGTGATGGCTTCGGCCTATGGTTGCCATTaGGAACACAAGTCTCAAGCCCTGCCATCTTACCAC | + |
Preference number: 4 (lower is better) Translates to: YLFVMASAYGCH*EHKSQALPSYH Trigger: GTGGTAAGATGGCAGGGCTTGAGACTTGTGTTCCAAATGGCAACCATAGGCCGAAGCCATCACAAAAAGATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120535.8 |
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3UTR CAA 72 bp | CCAAAAGTATCTTTTTGTGATGGCTTCGGCCTATGGTaGCCATTTGGAACACAAGTCTCAAGCCCTGCCATC | + |
Preference number: 4 (lower is better) Translates to: PKVSFCDGFGLW*PFGTQVSSPAI Trigger: GATGGCAGGGCTTGAGACTTGTGTTCCAAATGGCAACCATAGGCCGAAGCCATCACAAAAAGATACTTTTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120535.8 |
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CDS-3UTR TCA 90 bp | ATAACTCGATGGGAGGAAAGTCATTTCAACAAATGGCTGCTAGAAAAATTCAATGGCTTCTGTGAGCTGTaGCTCTGGAGCGGCCACCAA | + |
Preference number: 4 (lower is better) Translates to: ITRWEESHFNKWLLEKFNGFCEL*LWSGHQ Trigger: TTGGTGGCCGCTCCAGAGTCACAGCTCACAGAAGCC...ATTGAATTTTTCTAGCAGCCATTTGTTGAAATGACTTTCCTCCCATCGAGTTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
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CDS-3UTR GCA 90 bp | TCACTAGCAGGTGATGCAAGCAGGAGCCTTCATCAGAGATCACACCTGATGGTGGAGATTTTTACTGAGTaGATTTTTCCCATAAGCTCT | + |
Preference number: 4 (lower is better) Translates to: SLAGDASRSLHQRSHLMVEIFTE*IFPISS Trigger: AGAGCTTATGGGAAAAATGCACTCAGTAAAAATCTC...CACCATCAGGTGTGATCTCTGATGAAGGCTCCTGCTTGCATCACCTGCTAGTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
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3UTR CAA 72 bp | CTTAGACTCCAGGTTTCTGGTACTGAGTCCCAAGCTTaGAACTCTGGAGTACCTTTTGTTATTCAAAGCAGC | + |
Preference number: 4 (lower is better) Translates to: LRLQVSGTESQA*NSGVPFVIQSS Trigger: GCTGCTTTGAATAACAAAAGGTACTCCAGAGTTCAAAGCTTGGGACTCAGTACCAGAAACCTGGAGTCTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
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3UTR CAA 72 bp | GAGTTAGAAGTTAATGACAGCCAATCAATTACTTCCTaGGAACCGATGGGAATCCTAGCAGGATCGACGGAA | + |
Preference number: 4 (lower is better) Translates to: ELEVNDSQSITS*EPMGILAGSTE Trigger: TTCCGTCGATCCTGCTAGGATTCCCATCGGTTCCAAGGAAGTAATTGATTGGCTGTCATTAACTTCTAACTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119311.8 |
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3UTR CAA 72 bp | AAGCAAGCTCGTGAAAGGACACGTGATAAGGATTCTTaGCTAATGACATGCGTGTATTGGTCCACCTTACAC | + |
Preference number: 4 (lower is better) Translates to: KQARERTRDKDS*LMTCVYWSTLH Trigger: GTGTAAGGTGGACCAATACACGCATGTCATTAGCAAAGAATCCTTATCACGTGTCCTTTCACGAGCTTGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119311.8 |
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CDS-3UTR GCA 90 bp | CCAGTGACACTCTGCTATAGGAAACTGATTTCTTCTTTCCCATCAGGTATCGACGAGATTTTTACTGAGTaGATTTTTCCCATAAGCTCT | + |
Preference number: 4 (lower is better) Translates to: PVTLCYRKLISSFPSGIDEIFTE*IFPISS Trigger: AGAGCTTATGGGAAAAATGCACTCAGTAAAAATCTC...GTCGATACCTGATGGGAAAGAAGAAATCAGTTTCCTATAGCAGAGTGTCACTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000120535.8 |
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CDS-3UTR GCA 90 bp | ACTACTTGCATGACTGATTTCTGGCTCCCAGCATCATTTGTTGTTGTCAAAGACGAGATTTTTACTGAGTaGATTTTTCCCATAAGCTCT | + |
Preference number: 4 (lower is better) Translates to: TTCMTDFWLPASFVVVKDEIFTE*IFPISS Trigger: AGAGCTTATGGGAAAAATGCACTCAGTAAAAATCTC...GTCTTTGACAACAACAAATGATGCTGGGAGCCAGAAATCAGTCATGCAAGTAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000119311.8 |
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3UTR CAA 72 bp | GGCAGAAAGGATATACACATAACTGTTGTAACAAGTTaGCAAATTCAACTCATGCTGATGAGGGTTTTGTGG | + |
Preference number: 4 (lower is better) Translates to: GRKDIHITVVTS*QIQLMLMRVLW Trigger: CCACAAAACCCTCATCAGCATGAGTTGAATTTGCAAACTTGTTACAACAGTTATGTGTATATCCTTTCTGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
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CDS-3UTR CAA 90 bp | GCTGTTCCTGGGCATGGGGCCTGCCCTGGTGTGTGTCCGGTGTGCCCAGTGACAATCACCGATCGGATCTaGGAGACAAAGGGACCAACT | + |
Preference number: 5 (lower is better) Translates to: AVPGHGACPGVCPVCPVTITDRI*ETKGPT Trigger: AGTTGGTCCCTTTGTCTCCAAGATCCGATCGGTGAT...TGTCACTGGGCACACCGGACACACACCAGGGCAGGCCCCATGCCCAGGAACAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120535.8 |
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CDS-3UTR CAA 90 bp | CGGGGTGGCTCTGAACCACTTCCAGCACTATGGGAGGCTGCGGCGGGCTCTCCTATCACCGATCGGATCTaGGAGACAAAGGGACCAACT | + |
Preference number: 5 (lower is better) Translates to: RGGSEPLPALWEAAAGSPITDRI*ETKGPT Trigger: AGTTGGTCCCTTTGTCTCCAAGATCCGATCGGTGAT...AGGAGAGCCCGCCGCAGCCTCCCATAGTGCTGGAAGTGGTTCAGAGCCACCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021913.16 ENSMUST00000137064.8 |
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CDS-3UTR CAA 90 bp | GTGAGAACCCACTCTCCACTTTGGTCACTGCAATTTCCCATGGCAGCACGGGGTGTTTGGCCACTCTCATaGCAACAGGCCCCTGAGGTA | + |
Preference number: 5 (lower is better) Translates to: VRTHSPLWSLQFPMAARGVWPLS*QQAPEV Trigger: TACCTCAGGGGCCTGTTGCAATGAGAGTGGCCAAAC...ACCCCGTGCTGCCATGGGAAATTGCAGTGACCAAAGTGGAGAGTGGGTTCTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021913.16 ENSMUST00000137064.8 |
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CDS TCA 90 bp | CGTCTATGGCTGCGATGGTGGGCACCGGGAGGTTTGCAATGTCATTaGTCACCGATCGGATCTTGGAGACAAAGGGACCAACTTCACTGG | + |
Preference number: 5 (lower is better) Translates to: RLWLRWWAPGGLQCH*SPIGSWRQRDQLHW Trigger: CCAGTGAAGTTGGTCCCTTTGTCTCCAAGATCCGATCGGTGATCAATGACATTGCAAACCTCCCGGTGCCCACCATCGCAGCCATAGACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021913.16 ENSMUST00000123599.8 ENSMUST00000137064.8 |
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CDS TCA 90 bp | GGAGAGCACCGGGAGTCAGGAGTCACTTCTGGCTTCTGTGAGCTGTaGCTCTGGAGCGGCCACCAAAAAGGTGCAAATTGGAAACAAAGC | + |
Preference number: 5 (lower is better) Translates to: GEHRESGVTSGFCEL*LWSGHQKGANWKQS Trigger: GCTTTGTTTCCAATTTGCACCTTTTTGGTGGCCGCTCCAGAGTCACAGCTCACAGAAGCCAGAAGTGACTCCTGACTCCCGGTGCTCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
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CDS-3UTR CAA 90 bp | GAACCCACTCTCCACTTTGGTCACTGCAATTTCCCATGGCAGCACGGGGTGGCTCCAGTCTGTCCTTTGTaGAGATGGTCTGAGCATAGC | + |
Preference number: 5 (lower is better) Translates to: EPTLHFGHCNFPWQHGVAPVCPL*RWSEHS Trigger: GCTATGCTCAGACCATCTCAACAAAGGACAGACTGG...AGCCACCCCGTGCTGCCATGGGAAATTGCAGTGACCAAAGTGGAGAGTGGGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021913.16 |
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CDS-3UTR CAA 90 bp | ACCCACTCTCCACTTTGGTCACTGCAATTTCCCATGGCAGCACGGGGTGGCTCTTCACTGGAATGCATCTaGGCTCGTTCCTTAAGGTCA | + |
Preference number: 5 (lower is better) Translates to: THSPLWSLQFPMAARGGSSLECI*ARSLRS Trigger: TGACCTTAAGGAACGAGCCAAGATGCATTCCAGTGA...AGAGCCACCCCGTGCTGCCATGGGAAATTGCAGTGACCAAAGTGGAGAGTGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021913.16 ENSMUST00000137064.8 |
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CDS-3UTR CAA 90 bp | GGGCCTGCTCCGGGTGTAGTGAGAACCCACTCTCCACTTTGGTCACTGCAATTTATCACCGATCGGATCTaGGAGACAAAGGGACCAACT | + |
Preference number: 5 (lower is better) Translates to: GPAPGVVRTHSPLWSLQFITDRI*ETKGPT Trigger: AGTTGGTCCCTTTGTCTCCAAGATCCGATCGGTGAT...AAATTGCAGTGACCAAAGTGGAGAGTGGGTTCTCACTACACCCGGAGCAGGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021913.16 ENSMUST00000137064.8 |
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CDS-3UTR CAA 90 bp | GGGTGTAGTGAGAACCCACTCTCCACTTTGGTCACTGCAATTTCCCATGGCAGCCAACCAGGCCCATTTTaGCAGAGGAAGCTGCTACTC | + |
Preference number: 5 (lower is better) Translates to: GCSENPLSTLVTAISHGSQPGPF*QRKLLL Trigger: GAGTAGCAGCTTCCTCTGCAAAAATGGGCCTGGTTG...GCTGCCATGGGAAATTGCAGTGACCAAAGTGGAGAGTGGGTTCTCACTACACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021913.16 ENSMUST00000137064.8 |
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CDS-3UTR CAA 90 bp | TCACTGGGCGTCGGGAGTCACTCAGTAGCCAGTACTTTCAGACTGAAACCTTCCCAACCAGGCCCATTTTaGCAGAGGAAGCTGCTACTC | + |
Preference number: 5 (lower is better) Translates to: SLGVGSHSVASTFRLKPSQPGPF*QRKLLL Trigger: GAGTAGCAGCTTCCTCTGCAAAAATGGGCCTGGTTG...GGAAGGTTTCAGTCTGAAAGTACTGGCTACTGAGTGACTCCCGACGCCCAGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137064.8 |
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CDS-3UTR CAA 90 bp | TGTAGTGAGAACCCACTCTCCACTTTGGTCACTGCAATTTCCCATGGCAGCACGGTTTGGCCACTCTCATaGCAACAGGCCCCTGAGGTA | + |
Preference number: 5 (lower is better) Translates to: CSENPLSTLVTAISHGSTVWPLS*QQAPEV Trigger: TACCTCAGGGGCCTGTTGCAATGAGAGTGGCCAAAC...CGTGCTGCCATGGGAAATTGCAGTGACCAAAGTGGAGAGTGGGTTCTCACTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021913.16 ENSMUST00000137064.8 |
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CDS-3UTR CAA 90 bp | ACCCACTCTCCACTTTGGTCACTGCAATTTCCCATGGCAGCACGGGGTGGCTCTCTTCCAGTCTGTCCTTaGTTGAGATGGTCTGAGCAT | + |
Preference number: 5 (lower is better) Translates to: THSPLWSLQFPMAARGGSLPVCP*LRWSEH Trigger: ATGCTCAGACCATCTCAACAAAGGACAGACTGGAAG...AGAGCCACCCCGTGCTGCCATGGGAAATTGCAGTGACCAAAGTGGAGAGTGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021913.16 |
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CDS TCA 90 bp | TTCTGTTCTAACACATGGCTGATCAAGCCCACAGCTTTGGCTTCTTaGCCGTCAAGAACTCGGGCAGAGAAGATGAGTTCCTTAGCCAGG | + |
Preference number: 5 (lower is better) Translates to: FCSNTWLIKPTALAS*PSRTRAEKMSSLAR Trigger: CCTGGCTAAGGAACTCATCTTCTCTGCCCGAGTTCTTGACGGTCAAGAAGCCAAAGCTGTGGGCTTGATCAGCCATGTGTTAGAACAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021913.16 ENSMUST00000123599.8 ENSMUST00000137064.8 |
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CDS-3UTR CAA 90 bp | CTTTCTGTTGGTGACTCTGGCTCTGGCTGTGTGTCCCTCACACAGATTCATGAGTCACTGGAATGCATCTaGGCTCGTTCCTTAAGGTCA | + |
Preference number: 5 (lower is better) Translates to: LSVGDSGSGCVSLTQIHESLECI*ARSLRS Trigger: TGACCTTAAGGAACGAGCCAAGATGCATTCCAGTGA...CTCATGAATCTGTGTGAGGGACACACAGCCAGAGCCAGAGTCACCAACAGAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120535.8 |
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CDS-3UTR CAA 90 bp | GGGTGTAGTGAGAACCCACTCTCCACTTTGGTCACTGCAATTTCCCATGGCAGCTGGTTAATTGCTAGTTaGGCCACTCTCATTGCAACA | + |
Preference number: 5 (lower is better) Translates to: GCSENPLSTLVTAISHGSWLIAS*ATLIAT Trigger: TGTTGCAATGAGAGTGGCCAAACTAGCAATTAACCA...GCTGCCATGGGAAATTGCAGTGACCAAAGTGGAGAGTGGGTTCTCACTACACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021913.16 ENSMUST00000137064.8 |
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CDS TCA 90 bp | CAAAAAGGTGCAAATTGGAAACAAAGCTGGATGTCAGCCTTCAGCTaGAAAGAAACAGCACAGAATATCCCAGGGACTTCACTTCTGATG | + |
Preference number: 5 (lower is better) Translates to: QKGANWKQSWMSAFS*KETAQNIPGTSLLM Trigger: CATCAGAAGTGAAGTCCCTGGGATATTCTGTGCTGTTTCTTTTCAGCTGAAGGCTGACATCCAGCTTTGTTTCCAATTTGCACCTTTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
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CDS GCA 72 bp | CTCCAGACCCCCTCCGAGGGCAAGGCCGTCTATGGCTaGGATGGTGGGCACCGGGAGGTTTGCAATGTCATT | + |
Preference number: 6 (lower is better) Translates to: LQTPSEGKAVYG*DGGHREVCNVI Trigger: AATGACATTGCAAACCTCCCGGTGCCCACCATCGCAGCCATAGACGGCCTTGCCCTCGGAGGGGGTCTGGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021913.16 ENSMUST00000123599.8 ENSMUST00000137064.8 |
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CDS TCA 72 bp | AGAGCACCGGGAGTCAGGAGTCACTTCTGGCTTCTGTaGGCTGTGACTCTGGAGCGGCCACCAAAAAGGTGC | + |
Preference number: 6 (lower is better) Translates to: RAPGVRSHFWLL*AVTLERPPKRC Trigger: GCACCTTTTTGGTGGCCGCTCCAGAGTCACAGCTCACAGAAGCCAGAAGTGACTCCTGACTCCCGGTGCTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
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CDS TCA 72 bp | CGGGAGTCAGGAGTCACTTCTGGCTTCTGTGAGCTGTaGCTCTGGAGCGGCCACCAAAAAGGTGCAAATTGG | + |
Preference number: 6 (lower is better) Translates to: RESGVTSGFCEL*LWSGHQKGANW Trigger: CCAATTTGCACCTTTTTGGTGGCCGCTCCAGAGTCACAGCTCACAGAAGCCAGAAGTGACTCCTGACTCCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |
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CDS CAA 90 bp | CCGTCTATGGCTGCGATGGTGGGCACCGGGAGGTTTGCAATGTCATaGATCACCGATCGGATCTTGGAGACAAAGGGACCAACTTCACTG | + |
Preference number: 6 (lower is better) Translates to: PSMAAMVGTGRFAMS*ITDRILETKGPTSL Trigger: CAGTGAAGTTGGTCCCTTTGTCTCCAAGATCCGATCGGTGATCAATGACATTGCAAACCTCCCGGTGCCCACCATCGCAGCCATAGACGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021913.16 ENSMUST00000123599.8 ENSMUST00000137064.8 |
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CDS TCA 72 bp | CTGCGATGGTGGGCACCGGGAGGTTTGCAATGTCATTaGTCACCGATCGGATCTTGGAGACAAAGGGACCAA | + |
Preference number: 6 (lower is better) Translates to: LRWWAPGGLQCH*SPIGSWRQRDQ Trigger: TTGGTCCCTTTGTCTCCAAGATCCGATCGGTGATCAATGACATTGCAAACCTCCCGGTGCCCACCATCGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021913.16 ENSMUST00000123599.8 ENSMUST00000137064.8 |
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CDS CAA 90 bp | GTGGGCACCGGGAGGTTTGCAATGTCATTGATCACCGATCGGATCTaGGAGACAAAGGGACCAACTTCACTGGAATGCATCTTGGCTCGT | + |
Preference number: 6 (lower is better) Translates to: VGTGRFAMSLITDRI*ETKGPTSLECILAR Trigger: ACGAGCCAAGATGCATTCCAGTGAAGTTGGTCCCTTTGTCTCCAAGATCCGATCGGTGATCAATGACATTGCAAACCTCCCGGTGCCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021913.16 ENSMUST00000123599.8 ENSMUST00000137064.8 |
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CDS TCA 72 bp | AACACATGGCTGATCAAGCCCACAGCTTTGGCTTCTTaGCCGTCAAGAACTCGGGCAGAGAAGATGAGTTCC | + |
Preference number: 6 (lower is better) Translates to: NTWLIKPTALAS*PSRTRAEKMSS Trigger: GGAACTCATCTTCTCTGCCCGAGTTCTTGACGGTCAAGAAGCCAAAGCTGTGGGCTTGATCAGCCATGTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021913.16 ENSMUST00000123599.8 ENSMUST00000137064.8 |
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CDS TCA 72 bp | GCAAATTGGAAACAAAGCTGGATGTCAGCCTTCAGCTaGAAAGAAACAGCACAGAATATCCCAGGGACTTCA | + |
Preference number: 6 (lower is better) Translates to: ANWKQSWMSAFS*KETAQNIPGTS Trigger: TGAAGTCCCTGGGATATTCTGTGCTGTTTCTTTTCAGCTGAAGGCTGACATCCAGCTTTGTTTCCAATTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110031.4 |