Pregenerated sensors for ATXN7L3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059995Ensembl transcript IDs: ENSMUST00000073234.9, ENSMUST00000107132.3, ENSMUST00000107134.8, ENSMUST00000137387.8, ENSMUST00000141516.8
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CTTAAAAGCGGCAAGGGAGGGGAGAGAGGGCAGGCTTTAGAGGCGAGAGCACTGGTGGGGAGCAGGCAGTaGCCTGGCACAGTGCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: LKSGKGGERGQALEARALVGSRQ*PGTVPR Trigger: CCTGGGCACTGTGCCAGGGCACTGCCTGCTCCCCAC...CAGTGCTCTCGCCTCTAAAGCCTGCCCTCTCTCCCCTCCCTTGCCGCTTTTAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
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| 3UTR-3UTR CCA 90 bp | CTTAAAAGCGGCAAGGGAGGGGAGAGAGGGCAGGCTTTAGAGGCGAGAGCACTGGGGGCAAGCAGCAGCTaGGAGCTCAGGCTGCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: LKSGKGGERGQALEARALGASSS*ELRLPQ Trigger: CTGGGGCAGCCTGAGCTCCCAGCTGCTGCTTGCCCC...CAGTGCTCTCGCCTCTAAAGCCTGCCCTCTCTCCCCTCCCTTGCCGCTTTTAAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
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| 3UTR-3UTR CCA 90 bp | CTTAAAAGCGGCAAGGGAGGGGAGAGAGGGCAGGCTTTAGAGGCGAGAGCACTGCCAGGCTATGCTGCCTaGGTGGGGGTCGGGAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: LKSGKGGERGQALEARALPGYAA*VGVGRE Trigger: CTCTCTCCCGACCCCCACCCAGGCAGCATAGCCTGG...CAGTGCTCTCGCCTCTAAAGCCTGCCCTCTCTCCCCTCCCTTGCCGCTTTTAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
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| 3UTR-3UTR CCA 90 bp | CATAGCCAGATCTTCCAGCTCCAAGGTGTGATGCTACCTGCTGGGAGGTGGGATGGGCAGGGGGCAGGATaGGAGGGAGAACACGGGGCC | + |
|
Preference number: 2 (lower is better) Translates to: HSQIFQLQGVMLPAGRWDGQGAG*EGEHGA Trigger: GGCCCCGTGTTCTCCCTCCCATCCTGCCCCCTGCCC...ATCCCACCTCCCAGCAGGTAGCATCACACCTTGGAGCTGGAAGATCTGGCTATG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
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| 3UTR-3UTR GCA 90 bp | CATAGCCAGATCTTCCAGCTCCAAGGTGTGATGCTACCTGCTGGGAGGTGGGATGTGGGGAGCAGGCAGTaGCCTGGCACAGTGCCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: HSQIFQLQGVMLPAGRWDVGSRQ*PGTVPR Trigger: CCTGGGCACTGTGCCAGGGCACTGCCTGCTCCCCAC...ATCCCACCTCCCAGCAGGTAGCATCACACCTTGGAGCTGGAAGATCTGGCTATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
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| 3UTR-3UTR CCA 90 bp | GCAAGAGCCAGAAAACTAGGCTCAGGATCAACCCCATCCCTGTCAATCAGCCCAGGGCAGGGGGCAGGATaGGAGGGAGAACACGGGGCC | + |
|
Preference number: 2 (lower is better) Translates to: ARARKLGSGSTPSLSISPGQGAG*EGEHGA Trigger: GGCCCCGTGTTCTCCCTCCCATCCTGCCCCCTGCCC...TGGGCTGATTGACAGGGATGGGGTTGATCCTGAGCCTAGTTTTCTGGCTCTTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
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| 3UTR-3UTR CCA 90 bp | CATAGCCAGATCTTCCAGCTCCAAGGTGTGATGCTACCTGCTGGGAGGTGGGATGGGGCAAGCAGCAGCTaGGAGCTCAGGCTGCCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: HSQIFQLQGVMLPAGRWDGASSS*ELRLPQ Trigger: CTGGGGCAGCCTGAGCTCCCAGCTGCTGCTTGCCCC...ATCCCACCTCCCAGCAGGTAGCATCACACCTTGGAGCTGGAAGATCTGGCTATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
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| 3UTR-3UTR TCA 90 bp | CTTAAAAGCGGCAAGGGAGGGGAGAGAGGGCAGGCTTTAGAGGCGAGAGCACTGAACCTTTCACATTGCTaGGGGCAGCCAGGGGAGGCC | + |
|
Preference number: 2 (lower is better) Translates to: LKSGKGGERGQALEARALNLSHC*GQPGEA Trigger: GGCCTCCCCTGGCTGCCCTCAGCAATGTGAAAGGTT...CAGTGCTCTCGCCTCTAAAGCCTGCCCTCTCTCCCCTCCCTTGCCGCTTTTAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
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| 3UTR-3UTR TCA 90 bp | CTTAAAAGCGGCAAGGGAGGGGAGAGAGGGCAGGCTTTAGAGGCGAGAGCACTGAAGGGCTGCCTCCTGTaGGGCAGTTCTGGATGCCCA | + |
|
Preference number: 2 (lower is better) Translates to: LKSGKGGERGQALEARALKGCLL*GSSGCP Trigger: TGGGCATCCAGAACTGCCTCACAGGAGGCAGCCCTT...CAGTGCTCTCGCCTCTAAAGCCTGCCCTCTCTCCCCTCCCTTGCCGCTTTTAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
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| 3UTR-3UTR GCA 90 bp | CTTAAAAGCGGCAAGGGAGGGGAGAGAGGGCAGGCTTTAGAGGCGAGAGCACTGCACGCCGAGGGGTCATaGTCCGTTGCAGAGGATCCT | + |
|
Preference number: 2 (lower is better) Translates to: LKSGKGGERGQALEARALHAEGS*SVAEDP Trigger: AGGATCCTCTGCAACGGAGCATGACCCCTCGGCGTG...CAGTGCTCTCGCCTCTAAAGCCTGCCCTCTCTCCCCTCCCTTGCCGCTTTTAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
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| 3UTR-3UTR GCA 90 bp | GCAAGAGCCAGAAAACTAGGCTCAGGATCAACCCCATCCCTGTCAATCAGCCCAGTGGGGAGCAGGCAGTaGCCTGGCACAGTGCCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: ARARKLGSGSTPSLSISPVGSRQ*PGTVPR Trigger: CCTGGGCACTGTGCCAGGGCACTGCCTGCTCCCCAC...TGGGCTGATTGACAGGGATGGGGTTGATCCTGAGCCTAGTTTTCTGGCTCTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
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| 3UTR-3UTR CCA 90 bp | CATAGCCAGATCTTCCAGCTCCAAGGTGTGATGCTACCTGCTGGGAGGTGGGATCCAGGCTATGCTGCCTaGGTGGGGGTCGGGAGAGAG | + |
|
Preference number: 2 (lower is better) Translates to: HSQIFQLQGVMLPAGRWDPGYAA*VGVGRE Trigger: CTCTCTCCCGACCCCCACCCAGGCAGCATAGCCTGG...ATCCCACCTCCCAGCAGGTAGCATCACACCTTGGAGCTGGAAGATCTGGCTATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
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| 3UTR-3UTR CCA 90 bp | GCAAGAGCCAGAAAACTAGGCTCAGGATCAACCCCATCCCTGTCAATCAGCCCACCAGGCTATGCTGCCTaGGTGGGGGTCGGGAGAGAG | + |
|
Preference number: 2 (lower is better) Translates to: ARARKLGSGSTPSLSISPPGYAA*VGVGRE Trigger: CTCTCTCCCGACCCCCACCCAGGCAGCATAGCCTGG...TGGGCTGATTGACAGGGATGGGGTTGATCCTGAGCCTAGTTTTCTGGCTCTTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
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| 3UTR-3UTR CCA 90 bp | CATAGCCAGATCTTCCAGCTCCAAGGTGTGATGCTACCTGCTGGGAGGTGGGATACCGTCCCTCTCACCTaGGCCATCTCACAGCCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: HSQIFQLQGVMLPAGRWDTVPLT*AISQPW Trigger: CCAGGGCTGTGAGATGGCCCAGGTGAGAGGGACGGT...ATCCCACCTCCCAGCAGGTAGCATCACACCTTGGAGCTGGAAGATCTGGCTATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
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| 3UTR-3UTR TCA 90 bp | CATAGCCAGATCTTCCAGCTCCAAGGTGTGATGCTACCTGCTGGGAGGTGGGATAACCTTTCACATTGCTaGGGGCAGCCAGGGGAGGCC | + |
|
Preference number: 2 (lower is better) Translates to: HSQIFQLQGVMLPAGRWDNLSHC*GQPGEA Trigger: GGCCTCCCCTGGCTGCCCTCAGCAATGTGAAAGGTT...ATCCCACCTCCCAGCAGGTAGCATCACACCTTGGAGCTGGAAGATCTGGCTATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
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| 3UTR-3UTR TCA 90 bp | CATAGCCAGATCTTCCAGCTCCAAGGTGTGATGCTACCTGCTGGGAGGTGGGATAAGGGCTGCCTCCTGTaGGGCAGTTCTGGATGCCCA | + |
|
Preference number: 2 (lower is better) Translates to: HSQIFQLQGVMLPAGRWDKGCLL*GSSGCP Trigger: TGGGCATCCAGAACTGCCTCACAGGAGGCAGCCCTT...ATCCCACCTCCCAGCAGGTAGCATCACACCTTGGAGCTGGAAGATCTGGCTATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
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| 3UTR-3UTR TCA 90 bp | CATAGCCAGATCTTCCAGCTCCAAGGTGTGATGCTACCTGCTGGGAGGTGGGATGTGAGTGCTCTGGCATaGCAGTCCCACAGAGGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: HSQIFQLQGVMLPAGRWDVSALA*QSHRGA Trigger: TGCCCCTCTGTGGGACTGTCATGCCAGAGCACTCAC...ATCCCACCTCCCAGCAGGTAGCATCACACCTTGGAGCTGGAAGATCTGGCTATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
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| 3UTR-3UTR GCA 90 bp | CATAGCCAGATCTTCCAGCTCCAAGGTGTGATGCTACCTGCTGGGAGGTGGGATCACGCCGAGGGGTCATaGTCCGTTGCAGAGGATCCT | + |
|
Preference number: 2 (lower is better) Translates to: HSQIFQLQGVMLPAGRWDHAEGS*SVAEDP Trigger: AGGATCCTCTGCAACGGAGCATGACCCCTCGGCGTG...ATCCCACCTCCCAGCAGGTAGCATCACACCTTGGAGCTGGAAGATCTGGCTATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
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| 3UTR-3UTR CCA 90 bp | GCAAGAGCCAGAAAACTAGGCTCAGGATCAACCCCATCCCTGTCAATCAGCCCAACCGTCCCTCTCACCTaGGCCATCTCACAGCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: ARARKLGSGSTPSLSISPTVPLT*AISQPW Trigger: CCAGGGCTGTGAGATGGCCCAGGTGAGAGGGACGGT...TGGGCTGATTGACAGGGATGGGGTTGATCCTGAGCCTAGTTTTCTGGCTCTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
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| 3UTR-3UTR TCA 90 bp | GCAAGAGCCAGAAAACTAGGCTCAGGATCAACCCCATCCCTGTCAATCAGCCCAAACCTTTCACATTGCTaGGGGCAGCCAGGGGAGGCC | + |
|
Preference number: 2 (lower is better) Translates to: ARARKLGSGSTPSLSISPNLSHC*GQPGEA Trigger: GGCCTCCCCTGGCTGCCCTCAGCAATGTGAAAGGTT...TGGGCTGATTGACAGGGATGGGGTTGATCCTGAGCCTAGTTTTCTGGCTCTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
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| 3UTR-3UTR TCA 90 bp | GCAAGAGCCAGAAAACTAGGCTCAGGATCAACCCCATCCCTGTCAATCAGCCCAGTGAGTGCTCTGGCATaGCAGTCCCACAGAGGGGCA | + |
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Preference number: 2 (lower is better) Translates to: ARARKLGSGSTPSLSISPVSALA*QSHRGA Trigger: TGCCCCTCTGTGGGACTGTCATGCCAGAGCACTCAC...TGGGCTGATTGACAGGGATGGGGTTGATCCTGAGCCTAGTTTTCTGGCTCTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
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| 3UTR-3UTR GCA 90 bp | CATAGCCAGATCTTCCAGCTCCAAGGTGTGATGCTACCTGCTGGGAGGTGGGATGGTCAGGTAGGTGAGTaGTCTGGCATGACAGTCCCA | + |
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Preference number: 2 (lower is better) Translates to: HSQIFQLQGVMLPAGRWDGQVGE*SGMTVP Trigger: TGGGACTGTCATGCCAGAGCACTCACCTACCTGACC...ATCCCACCTCCCAGCAGGTAGCATCACACCTTGGAGCTGGAAGATCTGGCTATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
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| 3UTR-3UTR TCA 90 bp | CATAGCCAGATCTTCCAGCTCCAAGGTGTGATGCTACCTGCTGGGAGGTGGGATAGCACTGAGAGGAACTaGAGCTGGTCAAGGGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: HSQIFQLQGVMLPAGRWDSTERN*SWSRER Trigger: CCTTTCCCTTGACCAGCTTCAGTTCCTCTCAGTGCT...ATCCCACCTCCCAGCAGGTAGCATCACACCTTGGAGCTGGAAGATCTGGCTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
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| 3UTR-3UTR GCA 90 bp | GCAAGAGCCAGAAAACTAGGCTCAGGATCAACCCCATCCCTGTCAATCAGCCCAGGTCAGGTAGGTGAGTaGTCTGGCATGACAGTCCCA | + |
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Preference number: 2 (lower is better) Translates to: ARARKLGSGSTPSLSISPGQVGE*SGMTVP Trigger: TGGGACTGTCATGCCAGAGCACTCACCTACCTGACC...TGGGCTGATTGACAGGGATGGGGTTGATCCTGAGCCTAGTTTTCTGGCTCTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
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| 3UTR-3UTR GCA 90 bp | GCAAGAGCCAGAAAACTAGGCTCAGGATCAACCCCATCCCTGTCAATCAGCCCAAGGTGTGATGCTACCTaGTGGGAGGTGGGATACAGG | + |
|
Preference number: 2 (lower is better) Translates to: ARARKLGSGSTPSLSISPRCDAT*WEVGYR Trigger: CCTGTATCCCACCTCCCAGCAGGTAGCATCACACCT...TGGGCTGATTGACAGGGATGGGGTTGATCCTGAGCCTAGTTTTCTGGCTCTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
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| 3UTR-3UTR CCA 90 bp | GCAAGAGCCAGAAAACTAGGCTCAGGATCAACCCCATCCCTGTCAATCAGCCCACTACCTGCTGGGAGGTaGGATACAGGTCAGGTAGGT | + |
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Preference number: 2 (lower is better) Translates to: ARARKLGSGSTPSLSISPLPAGR*DTGQVG Trigger: ACCTACCTGACCTGTATCCCACCTCCCAGCAGGTAG...TGGGCTGATTGACAGGGATGGGGTTGATCCTGAGCCTAGTTTTCTGGCTCTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
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| 3UTR-3UTR TCA 90 bp | GCAAGAGCCAGAAAACTAGGCTCAGGATCAACCCCATCCCTGTCAATCAGCCCAAGCACTGAGAGGAACTaGAGCTGGTCAAGGGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: ARARKLGSGSTPSLSISPSTERN*SWSRER Trigger: CCTTTCCCTTGACCAGCTTCAGTTCCTCTCAGTGCT...TGGGCTGATTGACAGGGATGGGGTTGATCCTGAGCCTAGTTTTCTGGCTCTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
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| 3UTR-3UTR TCA 90 bp | GCAAGAGCCAGAAAACTAGGCTCAGGATCAACCCCATCCCTGTCAATCAGCCCATACAGGTCAGGTAGGTaGGTGCTCTGGCATGACAGT | + |
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Preference number: 2 (lower is better) Translates to: ARARKLGSGSTPSLSISPYRSGR*VLWHDS Trigger: ACTGTCATGCCAGAGCACTCACCTACCTGACCTGTA...TGGGCTGATTGACAGGGATGGGGTTGATCCTGAGCCTAGTTTTCTGGCTCTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
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| 3UTR-3UTR CCA 90 bp | GCAAGAGCCAGAAAACTAGGCTCAGGATCAACCCCATCCCTGTCAATCAGCCCATGTGATGCTACCTGCTaGGAGGTGGGATACAGGTCA | + |
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Preference number: 2 (lower is better) Translates to: ARARKLGSGSTPSLSISPCDATC*EVGYRS Trigger: TGACCTGTATCCCACCTCCCAGCAGGTAGCATCACA...TGGGCTGATTGACAGGGATGGGGTTGATCCTGAGCCTAGTTTTCTGGCTCTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
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| 3UTR GCA 72 bp | CCGGCTTCCCCTGACCTTCAGCAGGTTCCCAAGCTATaGTTGGTAGTGGGGCCGGCCCGAGAACCTTCTTTC | + |
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Preference number: 3 (lower is better) Translates to: PASPDLQQVPKL*LVVGPAREPSF Trigger: GAAAGAAGGTTCTCGGGCCGGCCCCACTACCAAGCATAGCTTGGGAACCTGCTGAAGGTCAGGGGAAGCCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
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| 3UTR CCA 72 bp | ACTGAGGGGAAAGGGCTGCCTCCTGTGAGGCAGTTCTaGATGCCCACCGTAGCAGACAGCACTGTGCCTGCT | + |
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Preference number: 3 (lower is better) Translates to: TEGKGLPPVRQF*MPTVADSTVPA Trigger: AGCAGGCACAGTGCTGTCTGCTACGGTGGGCATCCAGAACTGCCTCACAGGAGGCAGCCCTTTCCCCTCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
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| 3UTR-3UTR CAA 90 bp | CATAGCCAGATCTTCCAGCTCCAAGGTGTGATGCTACCTGCTGGGAGGTGGGATACCGAACCTTTCACATaGCTGAGGGCAGCCAGGGGA | + |
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Preference number: 3 (lower is better) Translates to: HSQIFQLQGVMLPAGRWDTEPFT*LRAARG Trigger: TCCCCTGGCTGCCCTCAGCAATGTGAAAGGTTCGGT...ATCCCACCTCCCAGCAGGTAGCATCACACCTTGGAGCTGGAAGATCTGGCTATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
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| 3UTR CCA 72 bp | TTCCAGCTCCAAGGTGTGATGCTACCTGCTGGGAGGTaGGATACAGGTCAGGTAGGTGAGTGCTCTGGCATG | + |
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Preference number: 3 (lower is better) Translates to: FQLQGVMLPAGR*DTGQVGECSGM Trigger: CATGCCAGAGCACTCACCTACCTGACCTGTATCCCACCTCCCAGCAGGTAGCATCACACCTTGGAGCTGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
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| 3UTR-3UTR CAA 90 bp | GCAAGAGCCAGAAAACTAGGCTCAGGATCAACCCCATCCCTGTCAATCAGCCCAACCGAACCTTTCACATaGCTGAGGGCAGCCAGGGGA | + |
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Preference number: 3 (lower is better) Translates to: ARARKLGSGSTPSLSISPTEPFT*LRAARG Trigger: TCCCCTGGCTGCCCTCAGCAATGTGAAAGGTTCGGT...TGGGCTGATTGACAGGGATGGGGTTGATCCTGAGCCTAGTTTTCTGGCTCTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
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| 3UTR TCA 72 bp | AATCAGCCCATAGCCAGATCTTCCAGCTCCAAGGTGTaGTGCTACCTGCTGGGAGGTGGGATACAGGTCAGG | + |
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Preference number: 3 (lower is better) Translates to: NQPIARSSSSKV*CYLLGGGIQVR Trigger: CCTGACCTGTATCCCACCTCCCAGCAGGTAGCATCACACCTTGGAGCTGGAAGATCTGGCTATGGGCTGATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
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| CDS-3UTR TCA 90 bp | CTTAAAAGCGGCAAGGGAGGGGAGAGAGGGCAGGCTTTAGAGGCGAGAGCACTGGAAGAGCCGTCCCACTaGAGCCGGCTGATGAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: LKSGKGGERGQALEARALEEPSH*SRLMRA Trigger: GGCCCTCATCAGCCGGCTTCAGTGGGACGGCTCTTC...CAGTGCTCTCGCCTCTAAAGCCTGCCCTCTCTCCCCTCCCTTGCCGCTTTTAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
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| 3UTR CAA 72 bp | GCTTCCCCTGACCTTCAGCAGGTTCCCAAGCTATGCTaGGTAGTGGGGCCGGCCCGAGAACCTTCTTTCCCC | + |
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Preference number: 4 (lower is better) Translates to: ASPDLQQVPKLC*VVGPAREPSFP Trigger: GGGGAAAGAAGGTTCTCGGGCCGGCCCCACTACCAAGCATAGCTTGGGAACCTGCTGAAGGTCAGGGGAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
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| CDS-3UTR TCA 90 bp | CATAGCCAGATCTTCCAGCTCCAAGGTGTGATGCTACCTGCTGGGAGGTGGGATGAAGAGCCGTCCCACTaGAGCCGGCTGATGAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: HSQIFQLQGVMLPAGRWDEEPSH*SRLMRA Trigger: GGCCCTCATCAGCCGGCTTCAGTGGGACGGCTCTTC...ATCCCACCTCCCAGCAGGTAGCATCACACCTTGGAGCTGGAAGATCTGGCTATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
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| CDS-3UTR CCA 90 bp | CTTAAAAGCGGCAAGGGAGGGGAGAGAGGGCAGGCTTTAGAGGCGAGAGCACTGATAGATGCTGGGCGTTaGGGGAGCCGGTGGCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LKSGKGGERGQALEARALIDAGR*GSRWLW Trigger: CCAAAGCCACCGGCTCCCCCAACGCCCAGCATCTAT...CAGTGCTCTCGCCTCTAAAGCCTGCCCTCTCTCCCCTCCCTTGCCGCTTTTAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
||
| CDS-3UTR TCA 90 bp | GCAAGAGCCAGAAAACTAGGCTCAGGATCAACCCCATCCCTGTCAATCAGCCCAGAAGAGCCGTCCCACTaGAGCCGGCTGATGAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ARARKLGSGSTPSLSISPEEPSH*SRLMRA Trigger: GGCCCTCATCAGCCGGCTTCAGTGGGACGGCTCTTC...TGGGCTGATTGACAGGGATGGGGTTGATCCTGAGCCTAGTTTTCTGGCTCTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
||
| CDS-3UTR GCA 90 bp | CTTAAAAGCGGCAAGGGAGGGGAGAGAGGGCAGGCTTTAGAGGCGAGAGCACTGGGTTGGCGATTCGGCTaGTGTTGCGACCCATTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LKSGKGGERGQALEARALGWRFG*CCDPFP Trigger: TGGGAATGGGTCGCAACAGCAGCCGAATCGCCAACC...CAGTGCTCTCGCCTCTAAAGCCTGCCCTCTCTCCCCTCCCTTGCCGCTTTTAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 |
||
| CDS-3UTR GCA 90 bp | CTTAAAAGCGGCAAGGGAGGGGAGAGAGGGCAGGCTTTAGAGGCGAGAGCACTGCTCTGTTCATCCGTGTaGTGCGGGCAGCGTAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LKSGKGGERGQALEARALLCSSV*CGQRSD Trigger: GTCACTACGCTGCCCGCAGCACACGGATGAACAGAG...CAGTGCTCTCGCCTCTAAAGCCTGCCCTCTCTCCCCTCCCTTGCCGCTTTTAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
||
| CDS-3UTR CCA 90 bp | CTTAAAAGCGGCAAGGGAGGGGAGAGAGGGCAGGCTTTAGAGGCGAGAGCACTGTGGCAATCCGACGGTTaGCGATTCGGCTGCTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LKSGKGGERGQALEARALWQSDG*RFGCCC Trigger: GCAACAGCAGCCGAATCGCCAACCGTCGGATTGCCA...CAGTGCTCTCGCCTCTAAAGCCTGCCCTCTCTCCCCTCCCTTGCCGCTTTTAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
||
| CDS-3UTR GCA 90 bp | CTTAAAAGCGGCAAGGGAGGGGAGAGAGGGCAGGCTTTAGAGGCGAGAGCACTGGGGAAGCAGCAATACTaGGGCTGCAATTGGGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LKSGKGGERGQALEARALGKQQY*GCNWGK Trigger: TTTGCCCCAATTGCAGCCGCAGTATTGCTGCTTCCC...CAGTGCTCTCGCCTCTAAAGCCTGCCCTCTCTCCCCTCCCTTGCCGCTTTTAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 |
||
| CDS-3UTR GCA 90 bp | CATAGCCAGATCTTCCAGCTCCAAGGTGTGATGCTACCTGCTGGGAGGTGGGATGGTTGGCGATTCGGCTaGTGTTGCGACCCATTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: HSQIFQLQGVMLPAGRWDGWRFG*CCDPFP Trigger: TGGGAATGGGTCGCAACAGCAGCCGAATCGCCAACC...ATCCCACCTCCCAGCAGGTAGCATCACACCTTGGAGCTGGAAGATCTGGCTATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 |
||
| CDS-3UTR GCA 90 bp | CATAGCCAGATCTTCCAGCTCCAAGGTGTGATGCTACCTGCTGGGAGGTGGGATCTCTGTTCATCCGTGTaGTGCGGGCAGCGTAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: HSQIFQLQGVMLPAGRWDLCSSV*CGQRSD Trigger: GTCACTACGCTGCCCGCAGCACACGGATGAACAGAG...ATCCCACCTCCCAGCAGGTAGCATCACACCTTGGAGCTGGAAGATCTGGCTATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
||
| CDS-3UTR CCA 90 bp | CTTAAAAGCGGCAAGGGAGGGGAGAGAGGGCAGGCTTTAGAGGCGAGAGCACTGTACTGCGGCTGCAATTaGGGCAAACACACTCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LKSGKGGERGQALEARALYCGCN*GKHTPC Trigger: GCAAGGAGTGTGTTTGCCCCAATTGCAGCCGCAGTA...CAGTGCTCTCGCCTCTAAAGCCTGCCCTCTCTCCCCTCCCTTGCCGCTTTTAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 |
||
| CDS-3UTR CCA 90 bp | CATAGCCAGATCTTCCAGCTCCAAGGTGTGATGCTACCTGCTGGGAGGTGGGATTGGCAATCCGACGGTTaGCGATTCGGCTGCTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: HSQIFQLQGVMLPAGRWDWQSDG*RFGCCC Trigger: GCAACAGCAGCCGAATCGCCAACCGTCGGATTGCCA...ATCCCACCTCCCAGCAGGTAGCATCACACCTTGGAGCTGGAAGATCTGGCTATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
||
| CDS-3UTR CCA 90 bp | CTTAAAAGCGGCAAGGGAGGGGAGAGAGGGCAGGCTTTAGAGGCGAGAGCACTGGCTTTTTCTTCTTGTTaGAGCCCAGGCCAGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LKSGKGGERGQALEARALAFSSC*SPGQRQ Trigger: CTGCCTCTGGCCTGGGCTCCAACAAGAAGAAAAAGC...CAGTGCTCTCGCCTCTAAAGCCTGCCCTCTCTCCCCTCCCTTGCCGCTTTTAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
||
| CDS-3UTR CCA 90 bp | GCAAGAGCCAGAAAACTAGGCTCAGGATCAACCCCATCCCTGTCAATCAGCCCAATAGATGCTGGGCGTTaGGGGAGCCGGTGGCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ARARKLGSGSTPSLSISPIDAGR*GSRWLW Trigger: CCAAAGCCACCGGCTCCCCCAACGCCCAGCATCTAT...TGGGCTGATTGACAGGGATGGGGTTGATCCTGAGCCTAGTTTTCTGGCTCTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
||
| CDS-3UTR GCA 90 bp | GCAAGAGCCAGAAAACTAGGCTCAGGATCAACCCCATCCCTGTCAATCAGCCCAGGTTGGCGATTCGGCTaGTGTTGCGACCCATTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ARARKLGSGSTPSLSISPGWRFG*CCDPFP Trigger: TGGGAATGGGTCGCAACAGCAGCCGAATCGCCAACC...TGGGCTGATTGACAGGGATGGGGTTGATCCTGAGCCTAGTTTTCTGGCTCTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 |
||
| CDS-3UTR GCA 90 bp | GCAAGAGCCAGAAAACTAGGCTCAGGATCAACCCCATCCCTGTCAATCAGCCCACTCTGTTCATCCGTGTaGTGCGGGCAGCGTAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: ARARKLGSGSTPSLSISPLCSSV*CGQRSD Trigger: GTCACTACGCTGCCCGCAGCACACGGATGAACAGAG...TGGGCTGATTGACAGGGATGGGGTTGATCCTGAGCCTAGTTTTCTGGCTCTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
||
| CDS-3UTR CCA 90 bp | CTTAAAAGCGGCAAGGGAGGGGAGAGAGGGCAGGCTTTAGAGGCGAGAGCACTGATGTCCAACCCAGGCTaGTCCACGATCTCAAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: LKSGKGGERGQALEARALMSNPG*STISKS Trigger: GGATTTTGAGATCGTGGACCAGCCTGGGTTGGACAT...CAGTGCTCTCGCCTCTAAAGCCTGCCCTCTCTCCCCTCCCTTGCCGCTTTTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 |
||
| CDS-3UTR CCA 90 bp | GCAAGAGCCAGAAAACTAGGCTCAGGATCAACCCCATCCCTGTCAATCAGCCCATGGCAATCCGACGGTTaGCGATTCGGCTGCTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: ARARKLGSGSTPSLSISPWQSDG*RFGCCC Trigger: GCAACAGCAGCCGAATCGCCAACCGTCGGATTGCCA...TGGGCTGATTGACAGGGATGGGGTTGATCCTGAGCCTAGTTTTCTGGCTCTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
||
| CDS-3UTR GCA 90 bp | CATAGCCAGATCTTCCAGCTCCAAGGTGTGATGCTACCTGCTGGGAGGTGGGATGGGAAGCAGCAATACTaGGGCTGCAATTGGGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: HSQIFQLQGVMLPAGRWDGKQQY*GCNWGK Trigger: TTTGCCCCAATTGCAGCCGCAGTATTGCTGCTTCCC...ATCCCACCTCCCAGCAGGTAGCATCACACCTTGGAGCTGGAAGATCTGGCTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 |
||
| CDS-3UTR CCA 90 bp | CTTAAAAGCGGCAAGGGAGGGGAGAGAGGGCAGGCTTTAGAGGCGAGAGCACTGGTGATTCAGAGCTGTTaGTACCTAAACCCCATCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LKSGKGGERGQALEARALVIQSC*YLNPIP Trigger: AGGGATGGGGTTTAGGTACCAACAGCTCTGAATCAC...CAGTGCTCTCGCCTCTAAAGCCTGCCCTCTCTCCCCTCCCTTGCCGCTTTTAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
||
| CDS-3UTR CCA 90 bp | CATAGCCAGATCTTCCAGCTCCAAGGTGTGATGCTACCTGCTGGGAGGTGGGATGCTTTTTCTTCTTGTTaGAGCCCAGGCCAGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HSQIFQLQGVMLPAGRWDAFSSC*SPGQRQ Trigger: CTGCCTCTGGCCTGGGCTCCAACAAGAAGAAAAAGC...ATCCCACCTCCCAGCAGGTAGCATCACACCTTGGAGCTGGAAGATCTGGCTATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
||
| CDS-3UTR CCA 90 bp | CTTAAAAGCGGCAAGGGAGGGGAGAGAGGGCAGGCTTTAGAGGCGAGAGCACTGGGGGAATTAGGGTTCTaGAATGGGAGATACCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: LKSGKGGERGQALEARALGELGF*NGRYHS Trigger: GCTATGGTATCTCCCATTCCAGAACCCTAATTCCCC...CAGTGCTCTCGCCTCTAAAGCCTGCCCTCTCTCCCCTCCCTTGCCGCTTTTAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000107132.3 ENSMUST00000137387.8 |
||
| CDS-3UTR GCA 90 bp | CATAGCCAGATCTTCCAGCTCCAAGGTGTGATGCTACCTGCTGGGAGGTGGGATCAGCAATACTGCGGCTaGAATTGGGGCAAACACACT | + |
|
Preference number: 4 (lower is better) Translates to: HSQIFQLQGVMLPAGRWDQQYCG*NWGKHT Trigger: AGTGTGTTTGCCCCAATTGCAGCCGCAGTATTGCTG...ATCCCACCTCCCAGCAGGTAGCATCACACCTTGGAGCTGGAAGATCTGGCTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 |
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| CDS-3UTR GCA 90 bp | GCAAGAGCCAGAAAACTAGGCTCAGGATCAACCCCATCCCTGTCAATCAGCCCAGGGAAGCAGCAATACTaGGGCTGCAATTGGGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: ARARKLGSGSTPSLSISPGKQQY*GCNWGK Trigger: TTTGCCCCAATTGCAGCCGCAGTATTGCTGCTTCCC...TGGGCTGATTGACAGGGATGGGGTTGATCCTGAGCCTAGTTTTCTGGCTCTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 |
||
| CDS-3UTR CCA 90 bp | CATAGCCAGATCTTCCAGCTCCAAGGTGTGATGCTACCTGCTGGGAGGTGGGATATGTCCAACCCAGGCTaGTCCACGATCTCAAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: HSQIFQLQGVMLPAGRWDMSNPG*STISKS Trigger: GGATTTTGAGATCGTGGACCAGCCTGGGTTGGACAT...ATCCCACCTCCCAGCAGGTAGCATCACACCTTGGAGCTGGAAGATCTGGCTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 |
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| CDS-3UTR CCA 90 bp | GCAAGAGCCAGAAAACTAGGCTCAGGATCAACCCCATCCCTGTCAATCAGCCCATACTGCGGCTGCAATTaGGGCAAACACACTCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: ARARKLGSGSTPSLSISPYCGCN*GKHTPC Trigger: GCAAGGAGTGTGTTTGCCCCAATTGCAGCCGCAGTA...TGGGCTGATTGACAGGGATGGGGTTGATCCTGAGCCTAGTTTTCTGGCTCTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 |
||
| CDS-3UTR CCA 90 bp | CTTAAAAGCGGCAAGGGAGGGGAGAGAGGGCAGGCTTTAGAGGCGAGAGCACTGTCATATTGTTGCTATTaGCAATCCGACGGTTGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: LKSGKGGERGQALEARALSYCCY*QSDGWR Trigger: TCGCCAACCGTCGGATTGCCAATAGCAACAATATGA...CAGTGCTCTCGCCTCTAAAGCCTGCCCTCTCTCCCCTCCCTTGCCGCTTTTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
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| CDS-3UTR CCA 90 bp | GCAAGAGCCAGAAAACTAGGCTCAGGATCAACCCCATCCCTGTCAATCAGCCCAGCTTTTTCTTCTTGTTaGAGCCCAGGCCAGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ARARKLGSGSTPSLSISPAFSSC*SPGQRQ Trigger: CTGCCTCTGGCCTGGGCTCCAACAAGAAGAAAAAGC...TGGGCTGATTGACAGGGATGGGGTTGATCCTGAGCCTAGTTTTCTGGCTCTTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
||
| CDS-3UTR GCA 90 bp | GCAAGAGCCAGAAAACTAGGCTCAGGATCAACCCCATCCCTGTCAATCAGCCCACAGCAATACTGCGGCTaGAATTGGGGCAAACACACT | + |
|
Preference number: 4 (lower is better) Translates to: ARARKLGSGSTPSLSISPQQYCG*NWGKHT Trigger: AGTGTGTTTGCCCCAATTGCAGCCGCAGTATTGCTG...TGGGCTGATTGACAGGGATGGGGTTGATCCTGAGCCTAGTTTTCTGGCTCTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 |
||
| CDS-3UTR GCA 90 bp | CTTAAAAGCGGCAAGGGAGGGGAGAGAGGGCAGGCTTTAGAGGCGAGAGCACTGAGCGTAGTGACCTTGTaGACATCTTCTTGGTATGTT | + |
|
Preference number: 4 (lower is better) Translates to: LKSGKGGERGQALEARALSVVTL*TSSWYV Trigger: AACATACCAAGAAGATGTGCACAAGGTCACTACGCT...CAGTGCTCTCGCCTCTAAAGCCTGCCCTCTCTCCCCTCCCTTGCCGCTTTTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
||
| CDS-3UTR CCA 90 bp | GCAAGAGCCAGAAAACTAGGCTCAGGATCAACCCCATCCCTGTCAATCAGCCCAATGTCCAACCCAGGCTaGTCCACGATCTCAAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: ARARKLGSGSTPSLSISPMSNPG*STISKS Trigger: GGATTTTGAGATCGTGGACCAGCCTGGGTTGGACAT...TGGGCTGATTGACAGGGATGGGGTTGATCCTGAGCCTAGTTTTCTGGCTCTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 |
||
| CDS-3UTR CCA 90 bp | CATAGCCAGATCTTCCAGCTCCAAGGTGTGATGCTACCTGCTGGGAGGTGGGATGTGATTCAGAGCTGTTaGTACCTAAACCCCATCCCT | + |
|
Preference number: 4 (lower is better) Translates to: HSQIFQLQGVMLPAGRWDVIQSC*YLNPIP Trigger: AGGGATGGGGTTTAGGTACCAACAGCTCTGAATCAC...ATCCCACCTCCCAGCAGGTAGCATCACACCTTGGAGCTGGAAGATCTGGCTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
||
| CDS-3UTR CCA 90 bp | CATAGCCAGATCTTCCAGCTCCAAGGTGTGATGCTACCTGCTGGGAGGTGGGATTCATATTGTTGCTATTaGCAATCCGACGGTTGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: HSQIFQLQGVMLPAGRWDSYCCY*QSDGWR Trigger: TCGCCAACCGTCGGATTGCCAATAGCAACAATATGA...ATCCCACCTCCCAGCAGGTAGCATCACACCTTGGAGCTGGAAGATCTGGCTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
||
| CDS-3UTR CCA 90 bp | GCAAGAGCCAGAAAACTAGGCTCAGGATCAACCCCATCCCTGTCAATCAGCCCAGTGATTCAGAGCTGTTaGTACCTAAACCCCATCCCT | + |
|
Preference number: 4 (lower is better) Translates to: ARARKLGSGSTPSLSISPVIQSC*YLNPIP Trigger: AGGGATGGGGTTTAGGTACCAACAGCTCTGAATCAC...TGGGCTGATTGACAGGGATGGGGTTGATCCTGAGCCTAGTTTTCTGGCTCTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
||
| CDS-3UTR CCA 90 bp | GCAAGAGCCAGAAAACTAGGCTCAGGATCAACCCCATCCCTGTCAATCAGCCCATCATATTGTTGCTATTaGCAATCCGACGGTTGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: ARARKLGSGSTPSLSISPSYCCY*QSDGWR Trigger: TCGCCAACCGTCGGATTGCCAATAGCAACAATATGA...TGGGCTGATTGACAGGGATGGGGTTGATCCTGAGCCTAGTTTTCTGGCTCTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
||
| CDS-3UTR GCA 90 bp | GCAAGAGCCAGAAAACTAGGCTCAGGATCAACCCCATCCCTGTCAATCAGCCCAAGCGTAGTGACCTTGTaGACATCTTCTTGGTATGTT | + |
|
Preference number: 4 (lower is better) Translates to: ARARKLGSGSTPSLSISPSVVTL*TSSWYV Trigger: AACATACCAAGAAGATGTGCACAAGGTCACTACGCT...TGGGCTGATTGACAGGGATGGGGTTGATCCTGAGCCTAGTTTTCTGGCTCTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
||
| CDS-3UTR CAA 90 bp | CTTAAAAGCGGCAAGGGAGGGGAGAGAGGGCAGGCTTTAGAGGCGAGAGCACTGTTGGCAATCCGACGGTaGGCGATTCGGCTGCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LKSGKGGERGQALEARALLAIRR*AIRLLL Trigger: CAACAGCAGCCGAATCGCCAACCGTCGGATTGCCAA...CAGTGCTCTCGCCTCTAAAGCCTGCCCTCTCTCCCCTCCCTTGCCGCTTTTAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
||
| CDS-3UTR CAA 90 bp | CTTAAAAGCGGCAAGGGAGGGGAGAGAGGGCAGGCTTTAGAGGCGAGAGCACTGGGGGAGCCGGTGGCTTaGGCTTTTTCTTCTTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LKSGKGGERGQALEARALGEPVA*AFSSCW Trigger: CCAACAAGAAGAAAAAGCCAAAGCCACCGGCTCCCC...CAGTGCTCTCGCCTCTAAAGCCTGCCCTCTCTCCCCTCCCTTGCCGCTTTTAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
||
| CDS-3UTR CAA 90 bp | CTTAAAAGCGGCAAGGGAGGGGAGAGAGGGCAGGCTTTAGAGGCGAGAGCACTGATACTGCGGCTGCAATaGGGGCAAACACACTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LKSGKGGERGQALEARALILRLQ*GQTHSL Trigger: CAAGGAGTGTGTTTGCCCCAATTGCAGCCGCAGTAT...CAGTGCTCTCGCCTCTAAAGCCTGCCCTCTCTCCCCTCCCTTGCCGCTTTTAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 |
||
| CDS-3UTR CAA 90 bp | CATAGCCAGATCTTCCAGCTCCAAGGTGTGATGCTACCTGCTGGGAGGTGGGATTTGGCAATCCGACGGTaGGCGATTCGGCTGCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: HSQIFQLQGVMLPAGRWDLAIRR*AIRLLL Trigger: CAACAGCAGCCGAATCGCCAACCGTCGGATTGCCAA...ATCCCACCTCCCAGCAGGTAGCATCACACCTTGGAGCTGGAAGATCTGGCTATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
||
| CDS-3UTR CAA 90 bp | GCAAGAGCCAGAAAACTAGGCTCAGGATCAACCCCATCCCTGTCAATCAGCCCATTGGCAATCCGACGGTaGGCGATTCGGCTGCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: ARARKLGSGSTPSLSISPLAIRR*AIRLLL Trigger: CAACAGCAGCCGAATCGCCAACCGTCGGATTGCCAA...TGGGCTGATTGACAGGGATGGGGTTGATCCTGAGCCTAGTTTTCTGGCTCTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
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| CDS-3UTR CAA 90 bp | CTTAAAAGCGGCAAGGGAGGGGAGAGAGGGCAGGCTTTAGAGGCGAGAGCACTGGGCAGCGTAGTGACCTaGTGCACATCTTCTTGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: LKSGKGGERGQALEARALGSVVT*CTSSWY Trigger: ATACCAAGAAGATGTGCACAAGGTCACTACGCTGCC...CAGTGCTCTCGCCTCTAAAGCCTGCCCTCTCTCCCCTCCCTTGCCGCTTTTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
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| CDS-3UTR CAA 90 bp | CATAGCCAGATCTTCCAGCTCCAAGGTGTGATGCTACCTGCTGGGAGGTGGGATGGCTTTTTCTTCTTGTaGGAGCCCAGGCCAGAGGCA | + |
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Preference number: 5 (lower is better) Translates to: HSQIFQLQGVMLPAGRWDGFFFL*EPRPEA Trigger: TGCCTCTGGCCTGGGCTCCAACAAGAAGAAAAAGCC...ATCCCACCTCCCAGCAGGTAGCATCACACCTTGGAGCTGGAAGATCTGGCTATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
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| CDS-3UTR CAA 90 bp | CTTAAAAGCGGCAAGGGAGGGGAGAGAGGGCAGGCTTTAGAGGCGAGAGCACTGTTTGGCTTTTTCTTCTaGTTGGAGCCCAGGCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LKSGKGGERGQALEARALFGFFF*LEPRPE Trigger: CTCTGGCCTGGGCTCCAACAAGAAGAAAAAGCCAAA...CAGTGCTCTCGCCTCTAAAGCCTGCCCTCTCTCCCCTCCCTTGCCGCTTTTAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
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| CDS-3UTR CAA 90 bp | CATAGCCAGATCTTCCAGCTCCAAGGTGTGATGCTACCTGCTGGGAGGTGGGATGGGGAGCCGGTGGCTTaGGCTTTTTCTTCTTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: HSQIFQLQGVMLPAGRWDGEPVA*AFSSCW Trigger: CCAACAAGAAGAAAAAGCCAAAGCCACCGGCTCCCC...ATCCCACCTCCCAGCAGGTAGCATCACACCTTGGAGCTGGAAGATCTGGCTATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
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| CDS-3UTR CAA 90 bp | GCAAGAGCCAGAAAACTAGGCTCAGGATCAACCCCATCCCTGTCAATCAGCCCAGGCTTTTTCTTCTTGTaGGAGCCCAGGCCAGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: ARARKLGSGSTPSLSISPGFFFL*EPRPEA Trigger: TGCCTCTGGCCTGGGCTCCAACAAGAAGAAAAAGCC...TGGGCTGATTGACAGGGATGGGGTTGATCCTGAGCCTAGTTTTCTGGCTCTTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
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| CDS-3UTR CAA 90 bp | GCAAGAGCCAGAAAACTAGGCTCAGGATCAACCCCATCCCTGTCAATCAGCCCAGGGGAGCCGGTGGCTTaGGCTTTTTCTTCTTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: ARARKLGSGSTPSLSISPGEPVA*AFSSCW Trigger: CCAACAAGAAGAAAAAGCCAAAGCCACCGGCTCCCC...TGGGCTGATTGACAGGGATGGGGTTGATCCTGAGCCTAGTTTTCTGGCTCTTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
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| CDS-3UTR CAA 90 bp | GCAAGAGCCAGAAAACTAGGCTCAGGATCAACCCCATCCCTGTCAATCAGCCCAATACTGCGGCTGCAATaGGGGCAAACACACTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: ARARKLGSGSTPSLSISPILRLQ*GQTHSL Trigger: CAAGGAGTGTGTTTGCCCCAATTGCAGCCGCAGTAT...TGGGCTGATTGACAGGGATGGGGTTGATCCTGAGCCTAGTTTTCTGGCTCTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 |
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| CDS-3UTR CAA 90 bp | CATAGCCAGATCTTCCAGCTCCAAGGTGTGATGCTACCTGCTGGGAGGTGGGATGGCAGCGTAGTGACCTaGTGCACATCTTCTTGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: HSQIFQLQGVMLPAGRWDGSVVT*CTSSWY Trigger: ATACCAAGAAGATGTGCACAAGGTCACTACGCTGCC...ATCCCACCTCCCAGCAGGTAGCATCACACCTTGGAGCTGGAAGATCTGGCTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
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| CDS-3UTR CAA 90 bp | CATAGCCAGATCTTCCAGCTCCAAGGTGTGATGCTACCTGCTGGGAGGTGGGATTTTGGCTTTTTCTTCTaGTTGGAGCCCAGGCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: HSQIFQLQGVMLPAGRWDFGFFF*LEPRPE Trigger: CTCTGGCCTGGGCTCCAACAAGAAGAAAAAGCCAAA...ATCCCACCTCCCAGCAGGTAGCATCACACCTTGGAGCTGGAAGATCTGGCTATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
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| CDS-3UTR CAA 90 bp | CATAGCCAGATCTTCCAGCTCCAAGGTGTGATGCTACCTGCTGGGAGGTGGGATTTCATATTGTTGCTATaGGCAATCCGACGGTTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: HSQIFQLQGVMLPAGRWDFILLL*AIRRLA Trigger: CGCCAACCGTCGGATTGCCAATAGCAACAATATGAA...ATCCCACCTCCCAGCAGGTAGCATCACACCTTGGAGCTGGAAGATCTGGCTATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
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| CDS-3UTR CAA 90 bp | CTTAAAAGCGGCAAGGGAGGGGAGAGAGGGCAGGCTTTAGAGGCGAGAGCACTGGACCAGTCATTGTCATaGATGTCATCGTTGTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LKSGKGGERGQALEARALDQSLS*MSSLSS Trigger: AGAAGACAACGATGACATCAATGACAATGACTGGTC...CAGTGCTCTCGCCTCTAAAGCCTGCCCTCTCTCCCCTCCCTTGCCGCTTTTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
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| CDS-3UTR CAA 90 bp | CTTAAAAGCGGCAAGGGAGGGGAGAGAGGGCAGGCTTTAGAGGCGAGAGCACTGGGGGAATTAGGGTTCTaGTCTGATTTTCTCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LKSGKGGERGQALEARALGELGF*SDFLFL Trigger: CAAGAAGAGAAAATCAGACAAGAACCCTAATTCCCC...CAGTGCTCTCGCCTCTAAAGCCTGCCCTCTCTCCCCTCCCTTGCCGCTTTTAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000073234.9 ENSMUST00000107134.8 ENSMUST00000141516.8 |
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| CDS-3UTR CAA 90 bp | CTTAAAAGCGGCAAGGGAGGGGAGAGAGGGCAGGCTTTAGAGGCGAGAGCACTGCTGATCCCAGTTGAGTaGCTATACTTAAAAGGATCG | + |
|
Preference number: 5 (lower is better) Translates to: LKSGKGGERGQALEARALLIPVE*LYLKGS Trigger: CGATCCTTTTAAGTATAGCAACTCAACTGGGATCAG...CAGTGCTCTCGCCTCTAAAGCCTGCCCTCTCTCCCCTCCCTTGCCGCTTTTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
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| CDS-3UTR CAA 90 bp | GCAAGAGCCAGAAAACTAGGCTCAGGATCAACCCCATCCCTGTCAATCAGCCCAGGCAGCGTAGTGACCTaGTGCACATCTTCTTGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: ARARKLGSGSTPSLSISPGSVVT*CTSSWY Trigger: ATACCAAGAAGATGTGCACAAGGTCACTACGCTGCC...TGGGCTGATTGACAGGGATGGGGTTGATCCTGAGCCTAGTTTTCTGGCTCTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
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| CDS-3UTR CAA 90 bp | GCAAGAGCCAGAAAACTAGGCTCAGGATCAACCCCATCCCTGTCAATCAGCCCATTTGGCTTTTTCTTCTaGTTGGAGCCCAGGCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: ARARKLGSGSTPSLSISPFGFFF*LEPRPE Trigger: CTCTGGCCTGGGCTCCAACAAGAAGAAAAAGCCAAA...TGGGCTGATTGACAGGGATGGGGTTGATCCTGAGCCTAGTTTTCTGGCTCTTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
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| CDS-3UTR CAA 90 bp | CTTAAAAGCGGCAAGGGAGGGGAGAGAGGGCAGGCTTTAGAGGCGAGAGCACTGGGGAGATACCATAGCTaGTCTGATTTTCTCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LKSGKGGERGQALEARALGRYHS*SDFLFL Trigger: CAAGAAGAGAAAATCAGACAAGCTATGGTATCTCCC...CAGTGCTCTCGCCTCTAAAGCCTGCCCTCTCTCCCCTCCCTTGCCGCTTTTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000107132.3 ENSMUST00000137387.8 |
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| CDS-3UTR CAA 90 bp | GCAAGAGCCAGAAAACTAGGCTCAGGATCAACCCCATCCCTGTCAATCAGCCCATTCATATTGTTGCTATaGGCAATCCGACGGTTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: ARARKLGSGSTPSLSISPFILLL*AIRRLA Trigger: CGCCAACCGTCGGATTGCCAATAGCAACAATATGAA...TGGGCTGATTGACAGGGATGGGGTTGATCCTGAGCCTAGTTTTCTGGCTCTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
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| CDS-3UTR CAA 90 bp | CATAGCCAGATCTTCCAGCTCCAAGGTGTGATGCTACCTGCTGGGAGGTGGGATGGGGAATTAGGGTTCTaGTCTGATTTTCTCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: HSQIFQLQGVMLPAGRWDGELGF*SDFLFL Trigger: CAAGAAGAGAAAATCAGACAAGAACCCTAATTCCCC...ATCCCACCTCCCAGCAGGTAGCATCACACCTTGGAGCTGGAAGATCTGGCTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000073234.9 ENSMUST00000107134.8 ENSMUST00000141516.8 |
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| CDS-3UTR CAA 90 bp | CATAGCCAGATCTTCCAGCTCCAAGGTGTGATGCTACCTGCTGGGAGGTGGGATCTGATCCCAGTTGAGTaGCTATACTTAAAAGGATCG | + |
|
Preference number: 5 (lower is better) Translates to: HSQIFQLQGVMLPAGRWDLIPVE*LYLKGS Trigger: CGATCCTTTTAAGTATAGCAACTCAACTGGGATCAG...ATCCCACCTCCCAGCAGGTAGCATCACACCTTGGAGCTGGAAGATCTGGCTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
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| CDS-3UTR CAA 90 bp | CTTAAAAGCGGCAAGGGAGGGGAGAGAGGGCAGGCTTTAGAGGCGAGAGCACTGACAGAGAACCCATTTTaGTGTTTTAGAGACTTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: LKSGKGGERGQALEARALTENPF*CFRDLD Trigger: ATCCAAGTCTCTAAAACACAAAAATGGGTTCTCTGT...CAGTGCTCTCGCCTCTAAAGCCTGCCCTCTCTCCCCTCCCTTGCCGCTTTTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000141516.8 |
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| CDS-3UTR CAA 90 bp | GCAAGAGCCAGAAAACTAGGCTCAGGATCAACCCCATCCCTGTCAATCAGCCCAGACCAGTCATTGTCATaGATGTCATCGTTGTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ARARKLGSGSTPSLSISPDQSLS*MSSLSS Trigger: AGAAGACAACGATGACATCAATGACAATGACTGGTC...TGGGCTGATTGACAGGGATGGGGTTGATCCTGAGCCTAGTTTTCTGGCTCTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
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| CDS-3UTR CAA 90 bp | GCAAGAGCCAGAAAACTAGGCTCAGGATCAACCCCATCCCTGTCAATCAGCCCAGGGGAATTAGGGTTCTaGTCTGATTTTCTCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: ARARKLGSGSTPSLSISPGELGF*SDFLFL Trigger: CAAGAAGAGAAAATCAGACAAGAACCCTAATTCCCC...TGGGCTGATTGACAGGGATGGGGTTGATCCTGAGCCTAGTTTTCTGGCTCTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000073234.9 ENSMUST00000107134.8 ENSMUST00000141516.8 |
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| CDS-3UTR CAA 90 bp | GCAAGAGCCAGAAAACTAGGCTCAGGATCAACCCCATCCCTGTCAATCAGCCCACTGATCCCAGTTGAGTaGCTATACTTAAAAGGATCG | + |
|
Preference number: 5 (lower is better) Translates to: ARARKLGSGSTPSLSISPLIPVE*LYLKGS Trigger: CGATCCTTTTAAGTATAGCAACTCAACTGGGATCAG...TGGGCTGATTGACAGGGATGGGGTTGATCCTGAGCCTAGTTTTCTGGCTCTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
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| CDS-3UTR CAA 90 bp | GCAAGAGCCAGAAAACTAGGCTCAGGATCAACCCCATCCCTGTCAATCAGCCCAGGGAGATACCATAGCTaGTCTGATTTTCTCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: ARARKLGSGSTPSLSISPGRYHS*SDFLFL Trigger: CAAGAAGAGAAAATCAGACAAGCTATGGTATCTCCC...TGGGCTGATTGACAGGGATGGGGTTGATCCTGAGCCTAGTTTTCTGGCTCTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000107132.3 ENSMUST00000137387.8 |
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| CDS-3UTR CAA 90 bp | GCAAGAGCCAGAAAACTAGGCTCAGGATCAACCCCATCCCTGTCAATCAGCCCATTAAAAGGATCGGAGTaGCTAAGTTCCCCTGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: ARARKLGSGSTPSLSISPLKGSE*LSSPEE Trigger: TTCTTCAGGGGAACTTAGCAACTCCGATCCTTTTAA...TGGGCTGATTGACAGGGATGGGGTTGATCCTGAGCCTAGTTTTCTGGCTCTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000141516.8 |
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| CDS CCA 72 bp | GTCAAAGCCATCGTTATCCAAGGAGCTCTCTACCTCTaGAAGAACGGCCGAGGGCCCAAGGAAATAAATCCG | + |
|
Preference number: 6 (lower is better) Translates to: VKAIVIQGALYL*KNGRGPKEINP Trigger: CGGATTTATTTCCTTGGGCCCTCGGCCGTTCTTCCAGAGGTAGAGAGCTCCTTGGATAACGATGGCTTTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 ENSMUST00000141516.8 |
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| CDS GCA 72 bp | CCAACCCAGGCTGGTCCACGATCTCAAAATCCTTCATaGTGTCAGGATCCGTATCATCCAGGAAGAAGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: PTQAGPRSQNPS*CQDPYHPGRSS Trigger: GCTACTTCTTCCTGGATGATACGGATCCTGACAGCATGAAGGATTTTGAGATCGTGGACCAGCCTGGGTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000073234.9 ENSMUST00000107132.3 ENSMUST00000107134.8 ENSMUST00000137387.8 |
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