Pregenerated sensors for ATXN2L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032637Ensembl transcript IDs: ENSMUST00000040202.15, ENSMUST00000166682.9, ENSMUST00000167759.8, ENSMUST00000179818.3, ENSMUST00000206577.2
Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGACAGAGCCAGGAGCAAGCCCCTGGCGGCGGCGACTGTGGCTTCTaGCCACCCTACATACTTCACAGACAGGTGTGGGTCGGCGGGCGC | + |
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Preference number: 1 (lower is better) Translates to: GQSQEQAPGGGDCGF*PPYILHRQVWVGGR Trigger: GCGCCCGCCGACCCACACCTGTCTGTGAAGTATGTAGGGTGGGCAGAAGCCACAGTCGCCGCCGCCAGGGGCTTGCTCCTGGCTCTGTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| 3UTR CCA 90 bp | GGCGACTGTGGCTTCTGCCCACCCTACATACTTCACAGACAGGTGTaGGTCGGCGGGCGCCCTCTGGGACAGCCCTGCCTCCAAGACCCC | + |
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Preference number: 1 (lower is better) Translates to: GDCGFCPPYILHRQV*VGGRPLGQPCLQDP Trigger: GGGGTCTTGGAGGCAGGGCTGTCCCAGAGGGCGCCCGCCGACCCACACCTGTCTGTGAAGTATGTAGGGTGGGCAGAAGCCACAGTCGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| 3UTR CCA 90 bp | AAGCAAAGGACAGAGCCAGGAGCAAGCCCCTGGCGGCGGCGACTGTaGCTTCTGCCCACCCTACATACTTCACAGACAGGTGTGGGTCGG | + |
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Preference number: 1 (lower is better) Translates to: KQRTEPGASPWRRRL*LLPTLHTSQTGVGR Trigger: CCGACCCACACCTGTCTGTGAAGTATGTAGGGTGGGCAGAAGCCACAGTCGCCGCCGCCAGGGGCTTGCTCCTGGCTCTGTCCTTTGCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| 3UTR-3UTR TCA 90 bp | GGGGAGGAGCGGCCTCCTCGAGGAGTCTCAGGGGACTGTCAGAAGCACAGGTCACCAGCCCGGCCCACTTaGAGGACCCCTCCCATTCAA | + |
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Preference number: 2 (lower is better) Translates to: GEERPPRGVSGDCQKHRSPARPT*RTPPIQ Trigger: TTGAATGGGAGGGGTCCTTCAAGTGGGCCGGGCTGG...TGACCTGTGCTTCTGACAGTCCCCTGAGACTCCTCGAGGAGGCCGCTCCTCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| 3UTR-3UTR GCA 90 bp | GGAGCGGCCTCCTCGAGGAGTCTCAGGGGACTGTCAGAAGCACAGGTCAATCGCCAGTCTGGCCCTGTCTaGTGCGCTGACCTTACCTCG | + |
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Preference number: 2 (lower is better) Translates to: GAASSRSLRGLSEAQVNRQSGPV*CADLTS Trigger: CGAGGTAAGGTCAGCGCAGCAGACAGGGCCAGACTG...GCGATTGACCTGTGCTTCTGACAGTCCCCTGAGACTCCTCGAGGAGGCCGCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| 3UTR-3UTR CCA 90 bp | GCACAGGTCAATCGCTGTTTCCCAGTAGGCCAGAGCCCTTACTCAGTTGCCCAGCCAGGAGCAAGCCCCTaGCGGCGGCGACTGTGGCTT | + |
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Preference number: 2 (lower is better) Translates to: AQVNRCFPVGQSPYSVAQPGASP*RRRLWL Trigger: AAGCCACAGTCGCCGCCGCCAGGGGCTTGCTCCTGG...CTGGGCAACTGAGTAAGGGCTCTGGCCTACTGGGAAACAGCGATTGACCTGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| 3UTR-3UTR CCA 90 bp | GCACAGGTCAATCGCTGTTTCCCAGTAGGCCAGAGCCCTTACTCAGTTGCCCAGCTTCACAGACAGGTGTaGGTCGGCGGGCGCCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: AQVNRCFPVGQSPYSVAQLHRQV*VGGRPL Trigger: CAGAGGGCGCCCGCCGACCCACACCTGTCTGTGAAG...CTGGGCAACTGAGTAAGGGCTCTGGCCTACTGGGAAACAGCGATTGACCTGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| 3UTR-3UTR GCA 90 bp | GCACAGGTCAATCGCTGTTTCCCAGTAGGCCAGAGCCCTTACTCAGTTGCCCAGGGCGACTGTGGCTTCTaGCCACCCTACATACTTCAC | + |
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Preference number: 2 (lower is better) Translates to: AQVNRCFPVGQSPYSVAQGDCGF*PPYILH Trigger: GTGAAGTATGTAGGGTGGGCAGAAGCCACAGTCGCC...CTGGGCAACTGAGTAAGGGCTCTGGCCTACTGGGAAACAGCGATTGACCTGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| 3UTR CCA 72 bp | GGCTTCTGCCCACCCTACATACTTCACAGACAGGTGTaGGTCGGCGGGCGCCCTCTGGGACAGCCCTGCCTC | + |
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Preference number: 3 (lower is better) Translates to: GFCPPYILHRQV*VGGRPLGQPCL Trigger: GAGGCAGGGCTGTCCCAGAGGGCGCCCGCCGACCCACACCTGTCTGTGAAGTATGTAGGGTGGGCAGAAGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| 3UTR GCA 72 bp | CAGGAGCAAGCCCCTGGCGGCGGCGACTGTGGCTTCTaGCCACCCTACATACTTCACAGACAGGTGTGGGTC | + |
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Preference number: 3 (lower is better) Translates to: QEQAPGGGDCGF*PPYILHRQVWV Trigger: GACCCACACCTGTCTGTGAAGTATGTAGGGTGGGCAGAAGCCACAGTCGCCGCCGCCAGGGGCTTGCTCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| CDS-3UTR TCA 90 bp | GTGGGGAGGAGCGGCCTCCTCGAGGAGTCTCAGGGGACTGTCAGAAGCACAGGTTGCCCCGCCTGGTGCTaGACGGGACTGGGGGCCGCA | + |
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Preference number: 4 (lower is better) Translates to: VGRSGLLEESQGTVRSTGCPAWC*TGLGAA Trigger: TGCGGCCCCCAGTCCCGTTCAGCACCAGGCGGGGCA...ACCTGTGCTTCTGACAGTCCCCTGAGACTCCTCGAGGAGGCCGCTCCTCCCCAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| CDS-3UTR GCA 90 bp | CCAGGAGCAAGCCCCTGGCGGCGGCGACTGTGGCTTCTGCCCACCCTACATACTGGCGCCTGGCCAGGCTaGTCACCTTGGGGGTGTCCG | + |
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Preference number: 4 (lower is better) Translates to: PGASPWRRRLWLLPTLHTGAWPG*SPWGCP Trigger: CGGACACCCCCAAGGTGAGCAGCCTGGCCAGGCGCC...AGTATGTAGGGTGGGCAGAAGCCACAGTCGCCGCCGCCAGGGGCTTGCTCCTGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| CDS-3UTR TCA 90 bp | CAGACAGGTGTGGGTCGGCGGGCGCCCTCTGGGACAGCCCTGCCTCCAAGACCCGCGCTGAGGAGGAAGTaGGCCTTTTGCACCCCGGTA | + |
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Preference number: 4 (lower is better) Translates to: QTGVGRRAPSGTALPPRPALRRK*AFCTPV Trigger: TACCGGGGTGCAAAAGGCTCACTTCCTCCTCAGCGC...GGGTCTTGGAGGCAGGGCTGTCCCAGAGGGCGCCCGCCGACCCACACCTGTCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| CDS-3UTR GCA 90 bp | GGGGAGGAGCGGCCTCCTCGAGGAGTCTCAGGGGACTGTCAGAAGCACAGGTCAGGTGTGGTGGCCGGCTaGGGCTGGTGGCCATGGAGC | + |
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Preference number: 4 (lower is better) Translates to: GEERPPRGVSGDCQKHRSGVVAG*GWWPWS Trigger: GCTCCATGGCCACCAGCCGCAGCCGGCCACCACACC...TGACCTGTGCTTCTGACAGTCCCCTGAGACTCCTCGAGGAGGCCGCTCCTCCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| CDS-3UTR CCA 90 bp | GGGGAGGAGCGGCCTCCTCGAGGAGTCTCAGGGGACTGTCAGAAGCACAGGTCAGTGGCCGGCTGCGGCTaGTGGCCATGGAGCTGCGTG | + |
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Preference number: 4 (lower is better) Translates to: GEERPPRGVSGDCQKHRSVAGCG*WPWSCV Trigger: CACGCAGCTCCATGGCCACCAGCCGCAGCCGGCCAC...TGACCTGTGCTTCTGACAGTCCCCTGAGACTCCTCGAGGAGGCCGCTCCTCCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| CDS-3UTR CCA 90 bp | GCCCTGTCTGCTGCGCTGACCTTACCTCGGCTAAGTCAGGAGACAGTCGGGGTCATCACCTGGGGCGGGTaGGGAGCCCCAGGGTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: ALSAALTLPRLSQETVGVITWGG*GAPGCG Trigger: CCCACACCCTGGGGCTCCCCACCCGCCCCAGGTGAT...GACCCCGACTGTCTCCTGACTTAGCCGAGGTAAGGTCAGCGCAGCAGACAGGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| CDS-3UTR GCA 90 bp | GCCCACCCTACATACTTCACAGACAGGTGTGGGTCGGCGGGCGCCCTCTGGGACGTGTGGGGGCGGGGCTaGTGTGACTCCAGTTTGGAC | + |
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Preference number: 4 (lower is better) Translates to: AHPTYFTDRCGSAGALWDVWGRG*CDSSLD Trigger: GTCCAAACTGGAGTCACAGCAGCCCCGCCCCCACAC...GTCCCAGAGGGCGCCCGCCGACCCACACCTGTCTGTGAAGTATGTAGGGTGGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| CDS-3UTR CCA 90 bp | CTACATACTTCACAGACAGGTGTGGGTCGGCGGGCGCCCTCTGGGACAGCCCTGCTGGGGGCCGCATGCTaGGATTGTGGCTGGCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: LHTSQTGVGRRAPSGTALLGAAC*DCGWLP Trigger: TGGGAGCCAGCCACAATCCCAGCATGCGGCCCCCAG...CAGGGCTGTCCCAGAGGGCGCCCGCCGACCCACACCTGTCTGTGAAGTATGTAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| CDS-3UTR CCA 90 bp | CCAGGAGCAAGCCCCTGGCGGCGGCGACTGTGGCTTCTGCCCACCCTACATACTGGAAATCCAGGCGCCTaGCCAGGCTGCTCACCTTGG | + |
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Preference number: 4 (lower is better) Translates to: PGASPWRRRLWLLPTLHTGNPGA*PGCSPW Trigger: CCAAGGTGAGCAGCCTGGCCAGGCGCCTGGATTTCC...AGTATGTAGGGTGGGCAGAAGCCACAGTCGCCGCCGCCAGGGGCTTGCTCCTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| CDS-3UTR TCA 90 bp | GGGGAGGAGCGGCCTCCTCGAGGAGTCTCAGGGGACTGTCAGAAGCACAGGTCAGGCGAACACCGGCTGTaGAGGGTAGTGTGCCATGGG | + |
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Preference number: 4 (lower is better) Translates to: GEERPPRGVSGDCQKHRSGEHRL*RVVCHG Trigger: CCCATGGCACACTACCCTTCACAGCCGGTGTTCGCC...TGACCTGTGCTTCTGACAGTCCCCTGAGACTCCTCGAGGAGGCCGCTCCTCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| CDS-3UTR GCA 90 bp | GCCCTGTCTGCTGCGCTGACCTTACCTCGGCTAAGTCAGGAGACAGTCGGGGTCGGACTGGGGGCCGCATaGTGGGATTGTGGCTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: ALSAALTLPRLSQETVGVGLGAA*WDCGWL Trigger: GAGCCAGCCACAATCCCAGCATGCGGCCCCCAGTCC...GACCCCGACTGTCTCCTGACTTAGCCGAGGTAAGGTCAGCGCAGCAGACAGGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| CDS-3UTR CCA 90 bp | GTGGGGAGGAGCGGCCTCCTCGAGGAGTCTCAGGGGACTGTCAGAAGCACAGGTGGTGCTGAACGGGACTaGGGGCCGCATGCTGGGATT | + |
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Preference number: 4 (lower is better) Translates to: VGRSGLLEESQGTVRSTGGAERD*GPHAGI Trigger: AATCCCAGCATGCGGCCCCCAGTCCCGTTCAGCACC...ACCTGTGCTTCTGACAGTCCCCTGAGACTCCTCGAGGAGGCCGCTCCTCCCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| CDS-3UTR GCA 90 bp | TGCCCACCCTACATACTTCACAGACAGGTGTGGGTCGGCGGGCGCCCTCTGGGACTCCTCGAGAACTGCTaGATCGAACTCCTCCCCGGG | + |
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Preference number: 4 (lower is better) Translates to: CPPYILHRQVWVGGRPLGLLENC*IELLPG Trigger: CCCGGGGAGGAGTTCGATGCAGCAGTTCTCGAGGAG...TCCCAGAGGGCGCCCGCCGACCCACACCTGTCTGTGAAGTATGTAGGGTGGGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| CDS-3UTR GCA 90 bp | GTGGGGAGGAGCGGCCTCCTCGAGGAGTCTCAGGGGACTGTCAGAAGCACAGGTGCAGCAGCAGCAGCCTaGATCATTGGAGGGGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: VGRSGLLEESQGTVRSTGAAAAA*IIGGAE Trigger: CTCAGCCCCTCCAATGATGCAGGCTGCTGCTGCTGC...ACCTGTGCTTCTGACAGTCCCCTGAGACTCCTCGAGGAGGCCGCTCCTCCCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| CDS-3UTR GCA 90 bp | GGAGCGGCCTCCTCGAGGAGTCTCAGGGGACTGTCAGAAGCACAGGTCAATCGCAGAACCCGTGCATCCTaGCCCACCTGCAGCCCCTCA | + |
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Preference number: 4 (lower is better) Translates to: GAASSRSLRGLSEAQVNRRTRAS*PTCSPS Trigger: TGAGGGGCTGCAGGTGGGGCAGGATGCACGGGTTCT...GCGATTGACCTGTGCTTCTGACAGTCCCCTGAGACTCCTCGAGGAGGCCGCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| CDS-3UTR CCA 90 bp | GGAGCGGCCTCCTCGAGGAGTCTCAGGGGACTGTCAGAAGCACAGGTCAATCGCATCTCTCGAGCCAACTaGGCCGCTCGAAGCTCCCGC | + |
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Preference number: 4 (lower is better) Translates to: GAASSRSLRGLSEAQVNRISRAN*AARSSR Trigger: GCGGGAGCTTCGAGCGGCCCAGTTGGCTCGAGAGAT...GCGATTGACCTGTGCTTCTGACAGTCCCCTGAGACTCCTCGAGGAGGCCGCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| CDS-3UTR CCA 90 bp | GCCCACCCTACATACTTCACAGACAGGTGTGGGTCGGCGGGCGCCCTCTGGGACCCACTGCCGAACCAATaGGAGGCTCAGGACAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: AHPTYFTDRCGSAGALWDPLPNQ*EAQDRK Trigger: CTTCCTGTCCTGAGCCTCCCATTGGTTCGGCAGTGG...GTCCCAGAGGGCGCCCGCCGACCCACACCTGTCTGTGAAGTATGTAGGGTGGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| CDS-3UTR CCA 90 bp | GTGGGGAGGAGCGGCCTCCTCGAGGAGTCTCAGGGGACTGTCAGAAGCACAGGTGACTGCCGGTTTGGCTaGGACAAGGTGCTGGGAGCT | + |
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Preference number: 4 (lower is better) Translates to: VGRSGLLEESQGTVRSTGDCRFG*DKVLGA Trigger: AGCTCCCAGCACCTTGTCCCAGCCAAACCGGCAGTC...ACCTGTGCTTCTGACAGTCCCCTGAGACTCCTCGAGGAGGCCGCTCCTCCCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| CDS-3UTR CCA 90 bp | GGAGCGGCCTCCTCGAGGAGTCTCAGGGGACTGTCAGAAGCACAGGTCAATCGCTGCGGCTGGTGGCCATaGAGCTGCGTGGCATGGTGT | + |
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Preference number: 4 (lower is better) Translates to: GAASSRSLRGLSEAQVNRCGWWP*SCVAWC Trigger: ACACCATGCCACGCAGCTCCATGGCCACCAGCCGCA...GCGATTGACCTGTGCTTCTGACAGTCCCCTGAGACTCCTCGAGGAGGCCGCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| CDS-3UTR CCA 90 bp | GCACAGGTCAATCGCTGTTTCCCAGTAGGCCAGAGCCCTTACTCAGTTGCCCAGGCCGGCTGCGGCTGGTaGCCATGGAGCTGCGTGGCA | + |
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Preference number: 4 (lower is better) Translates to: AQVNRCFPVGQSPYSVAQAGCGW*PWSCVA Trigger: TGCCACGCAGCTCCATGGCCACCAGCCGCAGCCGGC...CTGGGCAACTGAGTAAGGGCTCTGGCCTACTGGGAAACAGCGATTGACCTGTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| CDS-3UTR CCA 90 bp | GCCCACCCTACATACTTCACAGACAGGTGTGGGTCGGCGGGCGCCCTCTGGGACCGCATGCTGGGATTGTaGCTGGCTCCCAGTAGGTGT | + |
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Preference number: 4 (lower is better) Translates to: AHPTYFTDRCGSAGALWDRMLGL*LAPSRC Trigger: ACACCTACTGGGAGCCAGCCACAATCCCAGCATGCG...GTCCCAGAGGGCGCCCGCCGACCCACACCTGTCTGTGAAGTATGTAGGGTGGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| CDS-3UTR CCA 90 bp | CCAGGAGCAAGCCCCTGGCGGCGGCGACTGTGGCTTCTGCCCACCCTACATACTGCTGGTGGGGATGGATaGCATACACAGCAGCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: PGASPWRRRLWLLPTLHTAGGDG*HTQQLA Trigger: AGCCAGCTGCTGTGTATGCCATCCATCCCCACCAGC...AGTATGTAGGGTGGGCAGAAGCCACAGTCGCCGCCGCCAGGGGCTTGCTCCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| CDS-3UTR GCA 90 bp | CTACATACTTCACAGACAGGTGTGGGTCGGCGGGCGCCCTCTGGGACAGCCCTGACCTGCTGGCTCAGATaGTTTCCGATGCACCGCGTC | + |
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Preference number: 4 (lower is better) Translates to: LHTSQTGVGRRAPSGTALTCWLR*FPMHRV Trigger: GACGCGGTGCATCGGAAAGCATCTGAGCCAGCAGGT...CAGGGCTGTCCCAGAGGGCGCCCGCCGACCCACACCTGTCTGTGAAGTATGTAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| CDS-3UTR GCA 90 bp | GCCCACCCTACATACTTCACAGACAGGTGTGGGTCGGCGGGCGCCCTCTGGGACGCTCGAAGCTCCCGCTaGCGAAACTCTTCAGAGTTG | + |
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Preference number: 4 (lower is better) Translates to: AHPTYFTDRCGSAGALWDARSSR*RNSSEL Trigger: CAACTCTGAAGAGTTTCGGCAGCGGGAGCTTCGAGC...GTCCCAGAGGGCGCCCGCCGACCCACACCTGTCTGTGAAGTATGTAGGGTGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| CDS-3UTR GCA 90 bp | GGAGCGGCCTCCTCGAGGAGTCTCAGGGGACTGTCAGAAGCACAGGTCAATCGCGCCCTCCTCGAGAACTaGTGCATCGAACTCCTCCCC | + |
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Preference number: 4 (lower is better) Translates to: GAASSRSLRGLSEAQVNRALLEN*CIELLP Trigger: GGGGAGGAGTTCGATGCAGCAGTTCTCGAGGAGGGC...GCGATTGACCTGTGCTTCTGACAGTCCCCTGAGACTCCTCGAGGAGGCCGCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| CDS-3UTR GCA 90 bp | GCCCACCCTACATACTTCACAGACAGGTGTGGGTCGGCGGGCGCCCTCTGGGACGGACTTTCCCAGCTATaGGGGCCAGTTCTTGGGCTT | + |
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Preference number: 4 (lower is better) Translates to: AHPTYFTDRCGSAGALWDGLSQL*GPVLGL Trigger: AAGCCCAAGAACTGGCCCGCATAGCTGGGAAAGTCC...GTCCCAGAGGGCGCCCGCCGACCCACACCTGTCTGTGAAGTATGTAGGGTGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| CDS-3UTR GCA 90 bp | TGCCCACCCTACATACTTCACAGACAGGTGTGGGTCGGCGGGCGCCCTCTGGGAGTAGAGAAGGTGGCGTaGCTGTTAGGGCCCCTGGAT | + |
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Preference number: 4 (lower is better) Translates to: CPPYILHRQVWVGGRPLGVEKVA*LLGPLD Trigger: ATCCAGGGGCCCTAACAGGCACGCCACCTTCTCTAC...TCCCAGAGGGCGCCCGCCGACCCACACCTGTCTGTGAAGTATGTAGGGTGGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| CDS-3UTR CCA 90 bp | GCCCTGTCTGCTGCGCTGACCTTACCTCGGCTAAGTCAGGAGACAGTCGGGGTCAGACTTGGGAGACCGTaGAGGGTACATCCGGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: ALSAALTLPRLSQETVGVRLGRP*RVHPAH Trigger: GTGGGCCGGATGTACCCTCCACGGTCTCCCAAGTCT...GACCCCGACTGTCTCCTGACTTAGCCGAGGTAAGGTCAGCGCAGCAGACAGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| CDS-3UTR CCA 90 bp | GCCCACCCTACATACTTCACAGACAGGTGTGGGTCGGCGGGCGCCCTCTGGGACATGATGTCACAGGGATaGAGGCAGAGGACGCCACTG | + |
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Preference number: 4 (lower is better) Translates to: AHPTYFTDRCGSAGALWDMMSQG*RQRTPL Trigger: CAGTGGCGTCCTCTGCCTCCATCCCTGTGACATCAT...GTCCCAGAGGGCGCCCGCCGACCCACACCTGTCTGTGAAGTATGTAGGGTGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| CDS-3UTR CCA 90 bp | CAGACAGGTGTGGGTCGGCGGGCGCCCTCTGGGACAGCCCTGCCTCCAAGACCCGCCCAGGCACGGAATTaGATACAGGATATGGATACA | + |
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Preference number: 4 (lower is better) Translates to: QTGVGRRAPSGTALPPRPAQARN*IQDMDT Trigger: TGTATCCATATCCTGTATCCAATTCCGTGCCTGGGC...GGGTCTTGGAGGCAGGGCTGTCCCAGAGGGCGCCCGCCGACCCACACCTGTCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| CDS-3UTR CCA 90 bp | GCCCTGTCTGCTGCGCTGACCTTACCTCGGCTAAGTCAGGAGACAGTCGGGGTCGACGACACGATGGCCTaGGGATGGCTTCCCGATGTC | + |
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Preference number: 4 (lower is better) Translates to: ALSAALTLPRLSQETVGVDDTMA*GWLPDV Trigger: GACATCGGGAAGCCATCCCCAGGCCATCGTGTCGTC...GACCCCGACTGTCTCCTGACTTAGCCGAGGTAAGGTCAGCGCAGCAGACAGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| CDS-3UTR CCA 90 bp | CCAGGAGCAAGCCCCTGGCGGCGGCGACTGTGGCTTCTGCCCACCCTACATACTACTCCAGTTTGGACATaGGCCTGGGTAACATGGGCC | + |
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Preference number: 4 (lower is better) Translates to: PGASPWRRRLWLLPTLHTTPVWT*AWVTWA Trigger: GGCCCATGTTACCCAGGCCCATGTCCAAACTGGAGT...AGTATGTAGGGTGGGCAGAAGCCACAGTCGCCGCCGCCAGGGGCTTGCTCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| CDS-3UTR CCA 90 bp | CGACTGTGGCTTCTGCCCACCCTACATACTTCACAGACAGGTGTGGGTCGGCGGGTCATCGGCTCCTCCTaGAAATCCAGGCGCCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: RLWLLPTLHTSQTGVGRRVIGSS*KSRRLA Trigger: GGCCAGGCGCCTGGATTTCCAGGAGGAGCCGATGAC...CCGCCGACCCACACCTGTCTGTGAAGTATGTAGGGTGGGCAGAAGCCACAGTCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| CDS-3UTR TCA 90 bp | GCCCTGTCTGCTGCGCTGACCTTACCTCGGCTAAGTCAGGAGACAGTCGGGGTCACCTTCAAACACGGGTaGCTGTGGGGGTCCCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: ALSAALTLPRLSQETVGVTFKHG*LWGSLS Trigger: GGAAAGGGACCCCCACAGTCACCCGTGTTTGAAGGT...GACCCCGACTGTCTCCTGACTTAGCCGAGGTAAGGTCAGCGCAGCAGACAGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| CDS-3UTR TCA 90 bp | CTACATACTTCACAGACAGGTGTGGGTCGGCGGGCGCCCTCTGGGACAGCCCTGGGGGAGCTACTAGGTTaGAGCTTAAACTGGGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: LHTSQTGVGRRAPSGTALGELLG*SLNWAP Trigger: TGGGGCCCAGTTTAAGCTTCAACCTAGTAGCTCCCC...CAGGGCTGTCCCAGAGGGCGCCCGCCGACCCACACCTGTCTGTGAAGTATGTAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| CDS-3UTR TCA 90 bp | CCAGGAGCAAGCCCCTGGCGGCGGCGACTGTGGCTTCTGCCCACCCTACATACTTGTTGGTCAGAGCGCTaGGGAGGAAGTGAGCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PGASPWRRRLWLLPTLHTCWSER*GGSEPF Trigger: AAAAGGCTCACTTCCTCCTCAGCGCTCTGACCAACA...AGTATGTAGGGTGGGCAGAAGCCACAGTCGCCGCCGCCAGGGGCTTGCTCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| CDS-3UTR GCA 90 bp | CCAGGAGCAAGCCCCTGGCGGCGGCGACTGTGGCTTCTGCCCACCCTACATACTGGAGAGTTTTGGAGATaGCGGGGAAATAGAGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PGASPWRRRLWLLPTLHTGEFWR*RGNRAC Trigger: GCAGGCTCTATTTCCCCGGCATCTCCAAAACTCTCC...AGTATGTAGGGTGGGCAGAAGCCACAGTCGCCGCCGCCAGGGGCTTGCTCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
||
| CDS-3UTR CCA 90 bp | CAGACAGGTGTGGGTCGGCGGGCGCCCTCTGGGACAGCCCTGCCTCCAAGACCCACTGGGCTCCTTGGTTaGGAGTTCTTTTACATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QTGVGRRAPSGTALPPRPTGLLG*EFFYIC Trigger: ACAGATGTAAAAGAACTCCCAACCAAGGAGCCCAGT...GGGTCTTGGAGGCAGGGCTGTCCCAGAGGGCGCCCGCCGACCCACACCTGTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
||
| CDS-3UTR CCA 90 bp | GTGGGGAGGAGCGGCCTCCTCGAGGAGTCTCAGGGGACTGTCAGAAGCACAGGTGGCCATGGAGCTGCGTaGCATGGTGTGGATAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: VGRSGLLEESQGTVRSTGGHGAA*HGVDRI Trigger: AATCCTATCCACACCATGCCACGCAGCTCCATGGCC...ACCTGTGCTTCTGACAGTCCCCTGAGACTCCTCGAGGAGGCCGCTCCTCCCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
||
| CDS-3UTR CCA 90 bp | GGAGCGGCCTCCTCGAGGAGTCTCAGGGGACTGTCAGAAGCACAGGTCAATCGCTGCTGGGATTGTGGCTaGCTCCCAGTAGGTGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GAASSRSLRGLSEAQVNRCWDCG*LPVGVV Trigger: CACCACACCTACTGGGAGCCAGCCACAATCCCAGCA...GCGATTGACCTGTGCTTCTGACAGTCCCCTGAGACTCCTCGAGGAGGCCGCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| CDS-3UTR CCA 90 bp | GGGGAGGAGCGGCCTCCTCGAGGAGTCTCAGGGGACTGTCAGAAGCACAGGTCAAGCTGCTGGTGGGGATaGATGGCATACACAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GEERPPRGVSGDCQKHRSSCWWG*MAYTAA Trigger: AGCTGCTGTGTATGCCATCCATCCCCACCAGCAGCT...TGACCTGTGCTTCTGACAGTCCCCTGAGACTCCTCGAGGAGGCCGCTCCTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
||
| CDS-3UTR CCA 90 bp | GCCCACCCTACATACTTCACAGACAGGTGTGGGTCGGCGGGCGCCCTCTGGGACGTTTGGACATGGGCCTaGGTAACATGGGCCATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: AHPTYFTDRCGSAGALWDVWTWA*VTWAML Trigger: CAACATGGCCCATGTTACCCAGGCCCATGTCCAAAC...GTCCCAGAGGGCGCCCGCCGACCCACACCTGTCTGTGAAGTATGTAGGGTGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
||
| CDS-3UTR TCA 90 bp | GCCCTGTCTGCTGCGCTGACCTTACCTCGGCTAAGTCAGGAGACAGTCGGGGTCAGTACGGGGCCCTGGTaGAGTTGGAGTACTGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: ALSAALTLPRLSQETVGVSTGPW*SWSTGR Trigger: TCTACCAGTACTCCAACTTCACCAGGGCCCCGTACT...GACCCCGACTGTCTCCTGACTTAGCCGAGGTAAGGTCAGCGCAGCAGACAGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
||
| CDS-3UTR TCA 90 bp | CAGACAGGTGTGGGTCGGCGGGCGCCCTCTGGGACAGCCCTGCCTCCAAGACCCGATCTGAGGTATATATaGGATGTACTGGGGACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: QTGVGRRAPSGTALPPRPDLRYI*DVLGTV Trigger: TACAGTCCCCAGTACATCTCATATATACCTCAGATC...GGGTCTTGGAGGCAGGGCTGTCCCAGAGGGCGCCCGCCGACCCACACCTGTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
||
| CDS-3UTR CCA 90 bp | GTGGGGAGGAGCGGCCTCCTCGAGGAGTCTCAGGGGACTGTCAGAAGCACAGGTTATACTTCCCCTCCCTaGATACCAAGCTGGGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VGRSGLLEESQGTVRSTGYTSPP*IPSWGS Trigger: AGAGCCCCAGCTTGGTATCCAGGGAGGGGAAGTATA...ACCTGTGCTTCTGACAGTCCCCTGAGACTCCTCGAGGAGGCCGCTCCTCCCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
||
| CDS-3UTR CCA 90 bp | GCCCTGTCTGCTGCGCTGACCTTACCTCGGCTAAGTCAGGAGACAGTCGGGGTCGTACATCCGGCCCACTaGAAGAAAAGGGAGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ALSAALTLPRLSQETVGVVHPAH*KKRESC Trigger: GCAGCTCTCCCTTTTCTTCCAGTGGGCCGGATGTAC...GACCCCGACTGTCTCCTGACTTAGCCGAGGTAAGGTCAGCGCAGCAGACAGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
||
| CDS-3UTR CCA 90 bp | TGCCCACCCTACATACTTCACAGACAGGTGTGGGTCGGCGGGCGCCCTCTGGGAACGATGGCCTGGGGATaGCTTCCCGATGTCAACATT | + |
|
Preference number: 4 (lower is better) Translates to: CPPYILHRQVWVGGRPLGTMAWG*LPDVNI Trigger: AATGTTGACATCGGGAAGCCATCCCCAGGCCATCGT...TCCCAGAGGGCGCCCGCCGACCCACACCTGTCTGTGAAGTATGTAGGGTGGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
||
| CDS-3UTR TCA 90 bp | GCACAGGTCAATCGCTGTTTCCCAGTAGGCCAGAGCCCTTACTCAGTTGCCCAGTCTGCAGCAGGGTACTaGGGAGTGGAGGACGACACG | + |
|
Preference number: 4 (lower is better) Translates to: AQVNRCFPVGQSPYSVAQSAAGY*GVEDDT Trigger: CGTGTCGTCCTCCACTCCTCAGTACCCTGCTGCAGA...CTGGGCAACTGAGTAAGGGCTCTGGCCTACTGGGAAACAGCGATTGACCTGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
||
| CDS-3UTR CCA 90 bp | GGGGAGGAGCGGCCTCCTCGAGGAGTCTCAGGGGACTGTCAGAAGCACAGGTCACTGCGTGGCATGGTGTaGATAGGATTGGTGAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: GEERPPRGVSGDCQKHRSLRGMV*IGLVNS Trigger: ACTGTTCACCAATCCTATCCACACCATGCCACGCAG...TGACCTGTGCTTCTGACAGTCCCCTGAGACTCCTCGAGGAGGCCGCTCCTCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
||
| CDS-3UTR TCA 90 bp | GGGGAGGAGCGGCCTCCTCGAGGAGTCTCAGGGGACTGTCAGAAGCACAGGTCATTGAGCTCAGAGTCTTaGAAATGCCCTCGTAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GEERPPRGVSGDCQKHRSLSSES*KCPRKW Trigger: CCACTTACGAGGGCATTTTCAAGACTCTGAGCTCAA...TGACCTGTGCTTCTGACAGTCCCCTGAGACTCCTCGAGGAGGCCGCTCCTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| CDS-3UTR CCA 90 bp | GCCCACCCTACATACTTCACAGACAGGTGTGGGTCGGCGGGCGCCCTCTGGGACTCAACATTTCGGAAGTaGACAAGCAGAACGTCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: AHPTYFTDRCGSAGALWDSTFRK*TSRTSL Trigger: AAGCGACGTTCTGCTTGTCCACTTCCGAAATGTTGA...GTCCCAGAGGGCGCCCGCCGACCCACACCTGTCTGTGAAGTATGTAGGGTGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
||
| CDS-3UTR CCA 90 bp | GCCCTGTCTGCTGCGCTGACCTTACCTCGGCTAAGTCAGGAGACAGTCGGGGTCATCCGTAGGCGGTACTaGGGACTAGACTCAATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ALSAALTLPRLSQETVGVIRRRY*GLDSIS Trigger: AGAGATTGAGTCTAGTCCCCAGTACCGCCTACGGAT...GACCCCGACTGTCTCCTGACTTAGCCGAGGTAAGGTCAGCGCAGCAGACAGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
||
| CDS-3UTR CCA 90 bp | CTACATACTTCACAGACAGGTGTGGGTCGGCGGGCGCCCTCTGGGACAGCCCTGCTCCTACTCCTGCCATaGGCACTTTGTCTTCCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LHTSQTGVGRRAPSGTALLLLLP*ALCLPY Trigger: ATAAGGAAGACAAAGTGCCCATGGCAGGAGTAGGAG...CAGGGCTGTCCCAGAGGGCGCCCGCCGACCCACACCTGTCTGTGAAGTATGTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| CDS-3UTR CCA 90 bp | GCACAGGTCAATCGCTGTTTCCCAGTAGGCCAGAGCCCTTACTCAGTTGCCCAGCATGGCAGGCTGGCCTaGGAACTGCTGTGGGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: AQVNRCFPVGQSPYSVAQHGRLA*ELLWVV Trigger: TACAACCCACAGCAGTTCCCAGGCCAGCCTGCCATG...CTGGGCAACTGAGTAAGGGCTCTGGCCTACTGGGAAACAGCGATTGACCTGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
||
| CDS-3UTR TCA 90 bp | GCACAGGTCAATCGCTGTTTCCCAGTAGGCCAGAGCCCTTACTCAGTTGCCCAGCCTTCTCGAACTCGCTaGGGCAGGGGGATATACTTC | + |
|
Preference number: 4 (lower is better) Translates to: AQVNRCFPVGQSPYSVAQPSRTR*GRGIYF Trigger: GAAGTATATCCCCCTGCCTCAGCGAGTTCGAGAAGG...CTGGGCAACTGAGTAAGGGCTCTGGCCTACTGGGAAACAGCGATTGACCTGTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| CDS-3UTR TCA 90 bp | GGAGCGGCCTCCTCGAGGAGTCTCAGGGGACTGTCAGAAGCACAGGTCAATCGCCGTTTTTGTTCATTCTaGAGGCCAGGGACTTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GAASSRSLRGLSEAQVNRRFCSF*RPGTFP Trigger: TGGGAAAGTCCCTGGCCTTCAGAATGAACAAAAACG...GCGATTGACCTGTGCTTCTGACAGTCCCCTGAGACTCCTCGAGGAGGCCGCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| CDS-3UTR CCA 90 bp | CTACATACTTCACAGACAGGTGTGGGTCGGCGGGCGCCCTCTGGGACAGCCCTGTCCTACTGGGCTCCTTaGTTGGGAGTTCTTTTACAT | + |
|
Preference number: 4 (lower is better) Translates to: LHTSQTGVGRRAPSGTALSYWAP*LGVLLH Trigger: ATGTAAAAGAACTCCCAACCAAGGAGCCCAGTAGGA...CAGGGCTGTCCCAGAGGGCGCCCGCCGACCCACACCTGTCTGTGAAGTATGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
||
| CDS-3UTR TCA 90 bp | GTGGGGAGGAGCGGCCTCCTCGAGGAGTCTCAGGGGACTGTCAGAAGCACAGGTGTTCATGGCAATGGCTaGGTCAGTGAACTTATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VGRSGLLEESQGTVRSTGVHGNG*VSELIF Trigger: AAAGATAAGTTCACTGACTCAGCCATTGCCATGAAC...ACCTGTGCTTCTGACAGTCCCCTGAGACTCCTCGAGGAGGCCGCTCCTCCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| CDS-3UTR TCA 90 bp | GCCCTGTCTGCTGCGCTGACCTTACCTCGGCTAAGTCAGGAGACAGTCGGGGTCGGTCCCATGTGGATCTaGGGTATATATGAGATGTAC | + |
|
Preference number: 4 (lower is better) Translates to: ALSAALTLPRLSQETVGVGPMWI*GIYEMY Trigger: GTACATCTCATATATACCTCAGATCCACATGGGACC...GACCCCGACTGTCTCCTGACTTAGCCGAGGTAAGGTCAGCGCAGCAGACAGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
||
| CDS-3UTR TCA 90 bp | GCACAGGTCAATCGCTGTTTCCCAGTAGGCCAGAGCCCTTACTCAGTTGCCCAGGGATATGGATACATCTaGGGCGCCTGTACAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: AQVNRCFPVGQSPYSVAQGYGYI*GACTAG Trigger: ACCAGCTGTACAGGCGCCTCAGATGTATCCATATCC...CTGGGCAACTGAGTAAGGGCTCTGGCCTACTGGGAAACAGCGATTGACCTGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| CDS-3UTR CCA 90 bp | CGACTGTGGCTTCTGCCCACCCTACATACTTCACAGACAGGTGTGGGTCGGCGGCAGAAGGCCTATTGCTaGGTGAAGATAAGGTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RLWLLPTLHTSQTGVGRRQKAYC*VKIRSW Trigger: CCAAGACCTTATCTTCACCCAGCAATAGGCCTTCTG...CCGCCGACCCACACCTGTCTGTGAAGTATGTAGGGTGGGCAGAAGCCACAGTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| CDS-3UTR CCA 90 bp | CCAGGAGCAAGCCCCTGGCGGCGGCGACTGTGGCTTCTGCCCACCCTACATACTCGATGTCAACATTCGTaGATTACTTTGAAGCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: PGASPWRRRLWLLPTLHTRCQHS*ITLKHR Trigger: CCTATGCTTCAAAGTAATCCACGAATGTTGACATCG...AGTATGTAGGGTGGGCAGAAGCCACAGTCGCCGCCGCCAGGGGCTTGCTCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| CDS-3UTR GCA 90 bp | GGGGAGGAGCGGCCTCCTCGAGGAGTCTCAGGGGACTGTCAGAAGCACAGGTCATGTAAGAAGATAGACTaGTGTCATAGGTGGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GEERPPRGVSGDCQKHRSCKKID*CHRWSS Trigger: TGAAGACCACCTATGACAGCAGTCTATCTTCTTACA...TGACCTGTGCTTCTGACAGTCCCCTGAGACTCCTCGAGGAGGCCGCTCCTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| CDS-3UTR CCA 90 bp | CTACATACTTCACAGACAGGTGTGGGTCGGCGGGCGCCCTCTGGGACAGCCCTGGGAAATGCAGCATCCTaGAATTGTTATAGACACCTT | + |
|
Preference number: 4 (lower is better) Translates to: LHTSQTGVGRRAPSGTALGNAAS*NCYRHL Trigger: AAGGTGTCTATAACAATTCCAGGATGCTGCATTTCC...CAGGGCTGTCCCAGAGGGCGCCCGCCGACCCACACCTGTCTGTGAAGTATGTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
||
| CDS-3UTR CCA 90 bp | GCACAGGTCAATCGCTGTTTCCCAGTAGGCCAGAGCCCTTACTCAGTTGCCCAGGGTCAGGGAGAGTTTTaGAGATGCCGGGGAAATAGA | + |
|
Preference number: 4 (lower is better) Translates to: AQVNRCFPVGQSPYSVAQGQGEF*RCRGNR Trigger: TCTATTTCCCCGGCATCTCCAAAACTCTCCCTGACC...CTGGGCAACTGAGTAAGGGCTCTGGCCTACTGGGAAACAGCGATTGACCTGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| CDS CCA 90 bp | CCGCGGTGGCGGTCAGCGGTCCCGGGAGGCCGCCGTTGGGAGGGCTaGTCCCGCCGGGAGACCGGCGAGCCACGGCCTGTTGCGTGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: PRWRSAVPGGRRWEG*SRRETGEPRPVAWG Trigger: CCCCCACGCAACAGGCCGTGGCTCGCCGGTCTCCCGGCGGGACCAGCCCTCCCAACGGCGGCCTCCCGGGACCGCTGACCGCCACCGCGG 80% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040202.15 ENSMUST00000206577.2 |
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| CDS-3UTR CAA 90 bp | CCAGGAGCAAGCCCCTGGCGGCGGCGACTGTGGCTTCTGCCCACCCTACATACTGCAGGGGCAGCAGACTaGGGAGACCGTGGAGGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: PGASPWRRRLWLLPTLHTAGAAD*GDRGGY Trigger: GTACCCTCCACGGTCTCCCAAGTCTGCTGCCCCTGC...AGTATGTAGGGTGGGCAGAAGCCACAGTCGCCGCCGCCAGGGGCTTGCTCCTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| CDS TCA 90 bp | GTCTGTCCCCTGACGCTGCCGATAGCCACTGCCCCTGGCCTTTCTTaGTGCTGCGGCGGCGCTGACGCCGCTAAGATGCTTTCGGCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: VCPLTLPIATAPGLS*CCGGADAAKMLSAP Trigger: CGGAGCCGAAAGCATCTTAGCGGCGTCAGCGCCGCCGCAGCATCAAGAAAGGCCAGGGGCAGTGGCTATCGGCAGCGTCAGGGGACAGAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040202.15 ENSMUST00000206577.2 |
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| CDS-3UTR CAA 90 bp | CTACATACTTCACAGACAGGTGTGGGTCGGCGGGCGCCCTCTGGGACAGCCCTGGCCAGGCTGCTCACCTaGGGGGTGTCCGATGTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LHTSQTGVGRRAPSGTALARLLT*GVSDVG Trigger: CCCTACATCGGACACCCCCAAGGTGAGCAGCCTGGC...CAGGGCTGTCCCAGAGGGCGCCCGCCGACCCACACCTGTCTGTGAAGTATGTAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
||
| CDS-3UTR CAA 90 bp | GGAGCGGCCTCCTCGAGGAGTCTCAGGGGACTGTCAGAAGCACAGGTCAATCGCGGCCGCATGCTGGGATaGTGGCTGGCTCCCAGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: GAASSRSLRGLSEAQVNRGRMLG*WLAPSR Trigger: CCTACTGGGAGCCAGCCACAATCCCAGCATGCGGCC...GCGATTGACCTGTGCTTCTGACAGTCCCCTGAGACTCCTCGAGGAGGCCGCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| CDS TCA 90 bp | TCTGAAGGGATCCCCAAACGCCAGGTAACACAGCTCCTCGACGGCTaGTGTAACCGGCAGTTGAGGAGGGCGAGGAGGGGGCCGTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SEGIPKRQVTQLLDG*CNRQLRRARRGPLA Trigger: AGCCAACGGCCCCCTCCTCGCCCTCCTCAACTGCCGGTTACATCAGCCGTCGAGGAGCTGTGTTACCTGGCGTTTGGGGATCCCTTCAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179818.3 |
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| CDS-3UTR CAA 90 bp | CAGACAGGTGTGGGTCGGCGGGCGCCCTCTGGGACAGCCCTGCCTCCAAGACCCAGTAGACTTCTTCACTaGTTCAGTAACAGGGCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: QTGVGRRAPSGTALPPRPSRLLH*FSNRAL Trigger: GAGGGCCCTGTTACTGAACAAGTGAAGAAGTCTACT...GGGTCTTGGAGGCAGGGCTGTCCCAGAGGGCGCCCGCCGACCCACACCTGTCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
||
| CDS-3UTR CAA 90 bp | CTACATACTTCACAGACAGGTGTGGGTCGGCGGGCGCCCTCTGGGACAGCCCTGGAGGAAGTGAGCCTTTaGCACCCCGGTACTTGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: LHTSQTGVGRRAPSGTALEEVSL*HPGTCP Trigger: AGGGCAAGTACCGGGGTGCAAAAGGCTCACTTCCTC...CAGGGCTGTCCCAGAGGGCGCCCGCCGACCCACACCTGTCTGTGAAGTATGTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
||
| CDS-3UTR CAA 90 bp | GTGGGGAGGAGCGGCCTCCTCGAGGAGTCTCAGGGGACTGTCAGAAGCACAGGTAGGGGAGCTACTAGGTaGAAGCTTAAACTGGGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: VGRSGLLEESQGTVRSTGRGATR*KLKLGP Trigger: GGGGCCCAGTTTAAGCTTCAACCTAGTAGCTCCCCT...ACCTGTGCTTCTGACAGTCCCCTGAGACTCCTCGAGGAGGCCGCTCCTCCCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
||
| CDS-3UTR CAA 90 bp | TGCCCACCCTACATACTTCACAGACAGGTGTGGGTCGGCGGGCGCCCTCTGGGATCTTTCTCATCCCCCTaGATGAGGCCCACTGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: CPPYILHRQVWVGGRPLGSFSSP*MRPTGG Trigger: TCCTCCAGTGGGCCTCATCAAGGGGGATGAGAAAGA...TCCCAGAGGGCGCCCGCCGACCCACACCTGTCTGTGAAGTATGTAGGGTGGGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
||
| CDS-3UTR CAA 90 bp | CCAGGAGCAAGCCCCTGGCGGCGGCGACTGTGGCTTCTGCCCACCCTACATACTTGCCCAGGCACGGAATaGGATACAGGATATGGATAC | + |
|
Preference number: 5 (lower is better) Translates to: PGASPWRRRLWLLPTLHTCPGTE*DTGYGY Trigger: GTATCCATATCCTGTATCCAATTCCGTGCCTGGGCA...AGTATGTAGGGTGGGCAGAAGCCACAGTCGCCGCCGCCAGGGGCTTGCTCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
||
| CDS CCA 90 bp | ATCCGTAGGCGGTACTGGGGACTAGACTCAATCTCTCGAGCCAACTaGGCCGCTCGAAGCTCCCGCTGCCGAAACTCTTCAGAGTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: IRRRYWGLDSISRAN*AARSSRCRNSSELS Trigger: GGACAACTCTGAAGAGTTTCGGCAGCGGGAGCTTCGAGCGGCCCAGTTGGCTCGAGAGATTGAGTCTAGTCCCCAGTACCGCCTACGGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040202.15 ENSMUST00000166682.9 ENSMUST00000167759.8 ENSMUST00000206577.2 |
||
| CDS-3UTR CAA 90 bp | TGCCCACCCTACATACTTCACAGACAGGTGTGGGTCGGCGGGCGCCCTCTGGGATCTCCAGAAGGCCTATaGCTGGGTGAAGATAAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: CPPYILHRQVWVGGRPLGSPEGL*LGEDKV Trigger: GACCTTATCTTCACCCAGCAATAGGCCTTCTGGAGA...TCCCAGAGGGCGCCCGCCGACCCACACCTGTCTGTGAAGTATGTAGGGTGGGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
||
| CDS-3UTR CAA 90 bp | TGCCCACCCTACATACTTCACAGACAGGTGTGGGTCGGCGGGCGCCCTCTGGGAAGAGGTTTTGTTGGATaGAACTCCTTGGCGTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: CPPYILHRQVWVGGRPLGRGFVG*NSLALG Trigger: CCCCAACGCCAAGGAGTTCAATCCAACAAAACCTCT...TCCCAGAGGGCGCCCGCCGACCCACACCTGTCTGTGAAGTATGTAGGGTGGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
||
| CDS-3UTR CAA 90 bp | GCCCACCCTACATACTTCACAGACAGGTGTGGGTCGGCGGGCGCCCTCTGGGACGGAGTACTGGTAGATTaGTTCACAGACAGCAGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: AHPTYFTDRCGSAGALWDGVLVD*FTDSRG Trigger: ACCTCTGCTGTCTGTGAACAAATCTACCAGTACTCC...GTCCCAGAGGGCGCCCGCCGACCCACACCTGTCTGTGAAGTATGTAGGGTGGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
||
| CDS-3UTR CAA 90 bp | CTACATACTTCACAGACAGGTGTGGGTCGGCGGGCGCCCTCTGGGACAGCCCTGTACTGGGCTCCTTGGTaGGGAGTTCTTTTACATCTG | + |
|
Preference number: 5 (lower is better) Translates to: LHTSQTGVGRRAPSGTALYWAPW*GVLLHL Trigger: CAGATGTAAAAGAACTCCCAACCAAGGAGCCCAGTA...CAGGGCTGTCCCAGAGGGCGCCCGCCGACCCACACCTGTCTGTGAAGTATGTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| CDS-3UTR CAA 90 bp | GCCCTGTCTGCTGCGCTGACCTTACCTCGGCTAAGTCAGGAGACAGTCGGGGTCTATGCGGGCCAGTTCTaGGGCTTCCAAATTCCTACT | + |
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Preference number: 5 (lower is better) Translates to: ALSAALTLPRLSQETVGVYAGQF*GFQIPT Trigger: AGTAGGAATTTGGAAGCCCAAGAACTGGCCCGCATA...GACCCCGACTGTCTCCTGACTTAGCCGAGGTAAGGTCAGCGCAGCAGACAGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| CDS-3UTR CAA 90 bp | GGGGAGGAGCGGCCTCCTCGAGGAGTCTCAGGGGACTGTCAGAAGCACAGGTCATTGAACTCCTTGGCGTaGGGGTTCAAAGTAGACTTC | + |
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Preference number: 5 (lower is better) Translates to: GEERPPRGVSGDCQKHRSLNSLA*GFKVDF Trigger: GAAGTCTACTTTGAACCCCAACGCCAAGGAGTTCAA...TGACCTGTGCTTCTGACAGTCCCCTGAGACTCCTCGAGGAGGCCGCTCCTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| CDS-3UTR CAA 90 bp | TGCCCACCCTACATACTTCACAGACAGGTGTGGGTCGGCGGGCGCCCTCTGGGACATTCGTGGATTACTTaGAAGCATAGGGGCGAACAC | + |
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Preference number: 5 (lower is better) Translates to: CPPYILHRQVWVGGRPLGHSWIT*KHRGEH Trigger: GTGTTCGCCCCTATGCTTCAAAGTAATCCACGAATG...TCCCAGAGGGCGCCCGCCGACCCACACCTGTCTGTGAAGTATGTAGGGTGGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| CDS-3UTR CAA 90 bp | GTGGGGAGGAGCGGCCTCCTCGAGGAGTCTCAGGGGACTGTCAGAAGCACAGGTATGGTGTGGATAGGATaGGTGAACAGTGGCATAGAG | + |
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Preference number: 5 (lower is better) Translates to: VGRSGLLEESQGTVRSTGMVWIG*VNSGIE Trigger: CTCTATGCCACTGTTCACCAATCCTATCCACACCAT...ACCTGTGCTTCTGACAGTCCCCTGAGACTCCTCGAGGAGGCCGCTCCTCCCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167759.8 |
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| CDS CCA 72 bp | CGGTCAGCGGTCCCGGGAGGCCGCCGTTGGGAGGGCTaGTCCCGCCGGGAGACCGGCGAGCCACGGCCTGTT | + |
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Preference number: 6 (lower is better) Translates to: RSAVPGGRRWEG*SRRETGEPRPV Trigger: AACAGGCCGTGGCTCGCCGGTCTCCCGGCGGGACCAGCCCTCCCAACGGCGGCCTCCCGGGACCGCTGACCG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040202.15 ENSMUST00000206577.2 |
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| CDS TCA 72 bp | CTGACGCTGCCGATAGCCACTGCCCCTGGCCTTTCTTaGTGCTGCGGCGGCGCTGACGCCGCTAAGATGCTT | + |
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Preference number: 6 (lower is better) Translates to: LTLPIATAPGLS*CCGGADAAKML Trigger: AAGCATCTTAGCGGCGTCAGCGCCGCCGCAGCATCAAGAAAGGCCAGGGGCAGTGGCTATCGGCAGCGTCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040202.15 ENSMUST00000206577.2 |
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| CDS TCA 72 bp | GCTGTGCCTTGGGGGACATGCGGGAAGGACCTCCATTaGTACCACGTGCCTCAGACCCAGGGCCAGGACTGC | + |
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Preference number: 6 (lower is better) Translates to: AVPWGTCGKDLH*YHVPQTQGQDC Trigger: GCAGTCCTGGCCCTGGGTCTGAGGCACGTGGTATCAATGGAGGTCCTTCCCGCATGTCCCCCAAGGCACAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000040202.15 ENSMUST00000166682.9 ENSMUST00000167759.8 ENSMUST00000206577.2 |
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| CDS GCA 72 bp | CAGGAGCAAGCCCCTGGCGGCGGCGACTGTGGCTTCTaGCCACCCTACATAGAATCCTGTCATCGGCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: QEQAPGGGDCGF*PPYIESCHRLL Trigger: GAGGAGCCGATGACAGGATTCTATGTAGGGTGGGCAGAAGCCACAGTCGCCGCCGCCAGGGGCTTGCTCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206577.2 |
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| CDS CAA 72 bp | CGCTGTGCCTTGGGGGACATGCGGGAAGGACCTCCATaGATACCACGTGCCTCAGACCCAGGGCCAGGACTG | + |
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Preference number: 6 (lower is better) Translates to: RCALGDMREGPP*IPRASDPGPGL Trigger: CAGTCCTGGCCCTGGGTCTGAGGCACGTGGTATCAATGGAGGTCCTTCCCGCATGTCCCCCAAGGCACAGCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000040202.15 ENSMUST00000166682.9 ENSMUST00000167759.8 ENSMUST00000206577.2 |
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| CDS TCA 72 bp | ATCCCCAAACGCCAGGTAACACAGCTCCTCGACGGCTaGTGTAACCGGCAGTTGAGGAGGGCGAGGAGGGGG | + |
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Preference number: 6 (lower is better) Translates to: IPKRQVTQLLDG*CNRQLRRARRG Trigger: CCCCCTCCTCGCCCTCCTCAACTGCCGGTTACATCAGCCGTCGAGGAGCTGTGTTACCTGGCGTTTGGGGAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179818.3 |
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| CDS CCA 72 bp | CGGTACTGGGGACTAGACTCAATCTCTCGAGCCAACTaGGCCGCTCGAAGCTCCCGCTGCCGAAACTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: RYWGLDSISRAN*AARSSRCRNSS Trigger: TGAAGAGTTTCGGCAGCGGGAGCTTCGAGCGGCCCAGTTGGCTCGAGAGATTGAGTCTAGTCCCCAGTACCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040202.15 ENSMUST00000166682.9 ENSMUST00000167759.8 ENSMUST00000206577.2 |
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| CDS CCA 72 bp | AGGCCAGGGACTTTCCCAGCTATGCGGGCCAGTTCTTaGGCTTCCAAATTCCTACTGGGCTCCTTGGTTGGG | + |
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Preference number: 6 (lower is better) Translates to: RPGTFPAMRASS*ASKFLLGSLVG Trigger: CCCAACCAAGGAGCCCAGTAGGAATTTGGAAGCCCAAGAACTGGCCCGCATAGCTGGGAAAGTCCCTGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040202.15 ENSMUST00000166682.9 ENSMUST00000167759.8 ENSMUST00000206577.2 |
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| CDS TCA 72 bp | TGGCCTGCTGTCAGCACCGGTATAGAAGGTGTTGAATaGGTACGGGGCCCTGGTGAAGTTGGAGTACTGGTA | + |
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Preference number: 6 (lower is better) Translates to: WPAVSTGIEGVE*VRGPGEVGVLV Trigger: TACCAGTACTCCAACTTCACCAGGGCCCCGTACTCATTCAACACCTTCTATACCGGTGCTGACAGCAGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040202.15 ENSMUST00000166682.9 ENSMUST00000167759.8 ENSMUST00000206577.2 |
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| CDS CAA 72 bp | CTCCTTGGCGTTGGGGTTCAAAGTAGACTTCTTCACTaGTTCAGTAACAGGGCCCTCCTCTTTCTCATCCCC | + |
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Preference number: 6 (lower is better) Translates to: LLGVGVQSRLLH*FSNRALLFLIP Trigger: GGGGATGAGAAAGAGGAGGGCCCTGTTACTGAACAAGTGAAGAAGTCTACTTTGAACCCCAACGCCAAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040202.15 ENSMUST00000166682.9 ENSMUST00000167759.8 ENSMUST00000206577.2 |
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| CDS CCA 72 bp | TTCTTGGGCTTCCAAATTCCTACTGGGCTCCTTGGTTaGGAGTTCTTTTACATCTGTAGGGGTCAGGGAGAG | + |
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Preference number: 6 (lower is better) Translates to: FLGFQIPTGLLG*EFFYICRGQGE Trigger: CTCTCCCTGACCCCTACAGATGTAAAAGAACTCCCAACCAAGGAGCCCAGTAGGAATTTGGAAGCCCAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040202.15 ENSMUST00000166682.9 ENSMUST00000167759.8 ENSMUST00000206577.2 |
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| CDS TCA 72 bp | TTTCCGATGCACCGCGTCAACTGCCAGTTCAAACTTTaGGCTCAGAGTCTTGAAAATGCCCTCGTAAGTGGT | + |
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Preference number: 6 (lower is better) Translates to: FPMHRVNCQFKL*AQSLENALVSG Trigger: ACCACTTACGAGGGCATTTTCAAGACTCTGAGCTCAAAGTTTGAACTGGCAGTTGACGCGGTGCATCGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000040202.15 ENSMUST00000166682.9 ENSMUST00000167759.8 ENSMUST00000179818.3 ENSMUST00000206577.2 |
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| CDS GCA 72 bp | TGTCCTTTTCTAAGGGAACCGTGTAAGAAGATAGACTaGTGTCATAGGTGGTCTTCACTCCATAGTTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: CPFLREPCKKID*CHRWSSLHSSP Trigger: AGGAGAACTATGGAGTGAAGACCACCTATGACAGCAGTCTATCTTCTTACACGGTTCCCTTAGAAAAGGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040202.15 ENSMUST00000166682.9 ENSMUST00000167759.8 ENSMUST00000206577.2 |
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