RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATXN1L (Mus musculus)

Ensembl gene IDs: ENSMUSG00000069895

Ensembl transcript IDs: ENSMUST00000093162.4, ENSMUST00000212605.2

Found 364 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTCCAAGCCTGCAAGTCCCCATCTCAGCACCCTCTAAAGGTGTCCTaGGAGGGTGCCATGGGGTCACGAGCAACACACCCTGCTTTGGGA +
Preference number: 1 (lower is better)
Translates to: LQACKSPSQHPLKVS*EGAMGSRATHPALG
Trigger: TCCCAAAGCAGGGTGTGTTGCTCGTGACCCCATGGCACCCTCTCAGGACACCTTTAGAGGGTGCTGAGATGGGGACTTGCAGGCTTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR GCA 90 bp TGCCAAGAGAGCCACCCTCTGCTTGGCATGTGCAAATCCTCTCGATaGTCACAGAGGCTCACCTCTGGGGAGAAAGCCCCAGTCCTGGGT +
Preference number: 1 (lower is better)
Translates to: CQESHPLLGMCKSSR*SQRLTSGEKAPVLG
Trigger: ACCCAGGACTGGGGCTTTCTCCCCAGAGGTGAGCCTCTGTGAGCATCGAGAGGATTTGCACATGCCAAGCAGAGGGTGGCTCTCTTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR GCA 90 bp CTGCAAGTCCCCATCTCAGCACCCTCTAAAGGTGTCCTGAGAGGGTaGCATGGGGTCACGAGCAACACACCCTGCTTTGGGAGGCTGTCT +
Preference number: 1 (lower is better)
Translates to: LQVPISAPSKGVLRG*HGVTSNTPCFGRLS
Trigger: AGACAGCCTCCCAAAGCAGGGTGTGTTGCTCGTGACCCCATGGCACCCTCTCAGGACACCTTTAGAGGGTGCTGAGATGGGGACTTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR CCA 90 bp GGCACATGGGCTACCGCCACACACACTGCAGGCAGGAACCCAGTCTaGGGCCATCTTTACTGCCAGGCATTTACAGTGGAATGGCTTTGG +
Preference number: 1 (lower is better)
Translates to: GTWATATHTAGRNPV*GHLYCQAFTVEWLW
Trigger: CCAAAGCCATTCCACTGTAAATGCCTGGCAGTAAAGATGGCCCCAGACTGGGTTCCTGCCTGCAGTGTGTGTGGCGGTAGCCCATGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR GCA 90 bp TCCCCCAAATCTCACTGCCAAGAGAGCCACCCTCTGCTTGGCATGTaGAAATCCTCTCGATGCTCACAGAGGCTCACCTCTGGGGAGAAA +
Preference number: 1 (lower is better)
Translates to: SPKSHCQESHPLLGM*KSSRCSQRLTSGEK
Trigger: TTTCTCCCCAGAGGTGAGCCTCTGTGAGCATCGAGAGGATTTGCACATGCCAAGCAGAGGGTGGCTCTCTTGGCAGTGAGATTTGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR GCA 90 bp GCCACACACACTGCAGGCAGGAACCCAGTCTGGGGCCATCTTTACTaGCAGGCATTTACAGTGGAATGGCTTTGGGATCACACAGACTGT +
Preference number: 1 (lower is better)
Translates to: ATHTAGRNPVWGHLY*QAFTVEWLWDHTDC
Trigger: ACAGTCTGTGTGATCCCAAAGCCATTCCACTGTAAATGCCTGGCAGTAAAGATGGCCCCAGACTGGGTTCCTGCCTGCAGTGTGTGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR CCA 90 bp AAGACAGACGAAACGCTTGCAAATCTGACATTAGGTAAAGGCACATaGGCTACCGCCACACACACTGCAGGCAGGAACCCAGTCTGGGGC +
Preference number: 1 (lower is better)
Translates to: KTDETLANLTLGKGT*ATATHTAGRNPVWG
Trigger: GCCCCAGACTGGGTTCCTGCCTGCAGTGTGTGTGGCGGTAGCCCATGTGCCTTTACCTAATGTCAGATTTGCAAGCGTTTCGTCTGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR TCA 90 bp CCAAAAACTAGAGGTCTTAGTGGACAAAGGCAGTGCAGCTACACATaGGGCCCAGGTCAAGACACCATGCAGAGGTCAGGCAGCAGAAGG +
Preference number: 1 (lower is better)
Translates to: PKTRGLSGQRQCSYT*GPGQDTMQRSGSRR
Trigger: CCTTCTGCTGCCTGACCTCTGCATGGTGTCTTGACCTGGGCCTCATGTGTAGCTGCACTGCCTTTGTCCACTAAGACCTCTAGTTTTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR TCA 90 bp TTGCATAATGTGGGAGACCTTTCCTACCCTGGGGAAGCTAGACGGTaGAGGCTTCCAAGCAAGGGCTCACAACATCCATCCATAGTAGAA +
Preference number: 1 (lower is better)
Translates to: LHNVGDLSYPGEARR*RLPSKGSQHPSIVE
Trigger: TTCTACTATGGATGGATGTTGTGAGCCCTTGCTTGGAAGCCTTCACCGTCTAGCTTCCCCAGGGTAGGAAAGGTCTCCCACATTATGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR GCA 90 bp CAGCAGAGAAATGGGGGCAACACAGGGAAAGGATGTGATCTCCAATaGAGCACAAGGTCGGTGGTTGATTCTGACAGAAAGCAGAGACTT +
Preference number: 1 (lower is better)
Translates to: QQRNGGNTGKGCDLQ*STRSVVDSDRKQRL
Trigger: AAGTCTCTGCTTTCTGTCAGAATCAACCACCGACCTTGTGCTGCATTGGAGATCACATCCTTTCCCTGTGTTGCCCCCATTTCTCTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR CCA 90 bp GCAACACAGGGAAAGGATGTGATCTCCAATGCAGCACAAGGTCGGTaGTTGATTCTGACAGAAAGCAGAGACTTCAGTACTTGCGGTCAG +
Preference number: 1 (lower is better)
Translates to: ATQGKDVISNAAQGR*LILTESRDFSTCGQ
Trigger: CTGACCGCAAGTACTGAAGTCTCTGCTTTCTGTCAGAATCAACCACCGACCTTGTGCTGCATTGGAGATCACATCCTTTCCCTGTGTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR CCA 90 bp ATCCTAATACCCAATGGGGCCCTACAGTCCACGCTGACACTACTATaGGCTGTAGGGAAATGTGGGAATAAGACAGATGGCAGCAAATAC +
Preference number: 1 (lower is better)
Translates to: ILIPNGALQSTLTLL*AVGKCGNKTDGSKY
Trigger: GTATTTGCTGCCATCTGTCTTATTCCCACATTTCCCTACAGCCCATAGTAGTGTCAGCGTGGACTGTAGGGCCCCATTGGGTATTAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR CCA 90 bp AAGCTCCCATGGCCAATTGGATCAATCTGGTTATCTTTACCCCAATaGCTTGAGTCTTTCCCATCTTCAGCTAACACCAGTGCGACCACC +
Preference number: 1 (lower is better)
Translates to: KLPWPIGSIWLSLPQ*LESFPSSANTSATT
Trigger: GGTGGTCGCACTGGTGTTAGCTGAAGATGGGAAAGACTCAAGCCATTGGGGTAAAGATAACCAGATTGATCCAATTGGCCATGGGAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR CCA 90 bp AGAGAAAAGACCTGTTTGTTGTTCTCTCAAAGGCAGGCAAATTTTTaGAGCCTAAGGGTTCCTGAGGGCACTGAAGCCACATCCTTTCCG +
Preference number: 1 (lower is better)
Translates to: REKTCLLFSQRQANF*SLRVPEGTEATSFP
Trigger: CGGAAAGGATGTGGCTTCAGTGCCCTCAGGAACCCTTAGGCTCCAAAAATTTGCCTGCCTTTGAGAGAACAACAAACAGGTCTTTTCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR CCA 90 bp TGGTCTTTGTCCTGCTCACTTCCAAGACTATGGCCTAAGCTCCCATaGCCAATTGGATCAATCTGGTTATCTTTACCCCAATGGCTTGAG +
Preference number: 1 (lower is better)
Translates to: WSLSCSLPRLWPKLP*PIGSIWLSLPQWLE
Trigger: CTCAAGCCATTGGGGTAAAGATAACCAGATTGATCCAATTGGCCATGGGAGCTTAGGCCATAGTCTTGGAAGTGAGCAGGACAAAGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR TCA 90 bp GGTCTTTGTCAACTGCCCAGACTTCAAAAGCTGATAGCTAACCACTaGAATGCTCACTCTAAAAGCCAGTCACGTCTCCTACATCCTCAG +
Preference number: 1 (lower is better)
Translates to: GLCQLPRLQKLIANH*NAHSKSQSRLLHPQ
Trigger: CTGAGGATGTAGGAGACGTGACTGGCTTTTAGAGTGAGCATTTCAGTGGTTAGCTATCAGCTTTTGAAGTCTGGGCAGTTGACAAAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR GCA 90 bp TTCAGGAAAGGTAGCTCTCAGCCAAATCAAGTCACATCTGCATGGTaGCACATTAAGGGAGGCGCCGTGTTTACAAACAGGGATAAAGAA +
Preference number: 1 (lower is better)
Translates to: FRKGSSQPNQVTSAW*HIKGGAVFTNRDKE
Trigger: TTCTTTATCCCTGTTTGTAAACACGGCGCCTCCCTTAATGTGGCACCATGCAGATGTGACTTGATTTGGCTGAGAGCTACCTTTCCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR CCA 90 bp CTTCCAAGACTATGGCCTAAGCTCCCATGGCCAATTGGATCAATCTaGTTATCTTTACCCCAATGGCTTGAGTCTTTCCCATCTTCAGCT +
Preference number: 1 (lower is better)
Translates to: LPRLWPKLPWPIGSI*LSLPQWLESFPSSA
Trigger: AGCTGAAGATGGGAAAGACTCAAGCCATTGGGGTAAAGATAACCAGATTGATCCAATTGGCCATGGGAGCTTAGGCCATAGTCTTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR TCA 90 bp CGATTTAACAGCCCATCAACAGCATCCCCACCTCCCTGTTCAATATaGCTGAGCTACACAGTCATACTGGCAGAACACAGGTTAAAAATG +
Preference number: 1 (lower is better)
Translates to: RFNSPSTASPPPCSI*LSYTVILAEHRLKM
Trigger: CATTTTTAACCTGTGTTCTGCCAGTATGACTGTGTAGCTCAGTCATATTGAACAGGGAGGTGGGGATGCTGTTGATGGGCTGTTAAATCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR TCA 90 bp TGCCAGGCATTTACAGTGGAATGGCTTTGGGATCACACAGACTGTTaGGTTTGCAATCTACTAGGGAAAGATCTAGGCTTAACAGGAGAA +
Preference number: 1 (lower is better)
Translates to: CQAFTVEWLWDHTDC*VCNLLGKDLGLTGE
Trigger: TTCTCCTGTTAAGCCTAGATCTTTCCCTAGTAGATTGCAAACTCAACAGTCTGTGTGATCCCAAAGCCATTCCACTGTAAATGCCTGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR GCA 90 bp TTAGTCCTAGGAAGTTATCACATCTCTAAAACATGGTCTTTGTCCTaGTCACTTCCAAGACTATGGCCTAAGCTCCCATGGCCAATTGGA +
Preference number: 1 (lower is better)
Translates to: LVLGSYHISKTWSLS*SLPRLWPKLPWPIG
Trigger: TCCAATTGGCCATGGGAGCTTAGGCCATAGTCTTGGAAGTGAGCAGGACAAAGACCATGTTTTAGAGATGTGATAACTTCCTAGGACTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR CCA 90 bp CACATCTCTAAAACATGGTCTTTGTCCTGCTCACTTCCAAGACTATaGCCTAAGCTCCCATGGCCAATTGGATCAATCTGGTTATCTTTA +
Preference number: 1 (lower is better)
Translates to: HISKTWSLSCSLPRL*PKLPWPIGSIWLSL
Trigger: TAAAGATAACCAGATTGATCCAATTGGCCATGGGAGCTTAGGCCATAGTCTTGGAAGTGAGCAGGACAAAGACCATGTTTTAGAGATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR CCA 90 bp AGTTTAGTAAACTTAGTCCTAGGAAGTTATCACATCTCTAAAACATaGTCTTTGTCCTGCTCACTTCCAAGACTATGGCCTAAGCTCCCA +
Preference number: 1 (lower is better)
Translates to: SLVNLVLGSYHISKT*SLSCSLPRLWPKLP
Trigger: TGGGAGCTTAGGCCATAGTCTTGGAAGTGAGCAGGACAAAGACCATGTTTTAGAGATGTGATAACTTCCTAGGACTAAGTTTACTAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR CCA 90 bp GTAAAGGCACATGGGCTACCGCCACACACACTGCAGGCAGGAACCCAGTCTGGGCTCCACAGTCCCGACTaGGTTCCTGGCAAGGCAGTC +
Preference number: 2 (lower is better)
Translates to: VKAHGLPPHTLQAGTQSGLHSPD*VPGKAV
Trigger: GACTGCCTTGCCAGGAACCCAGTCGGGACTGTGGAG...CCCAGACTGGGTTCCTGCCTGCAGTGTGTGTGGCGGTAGCCCATGTGCCTTTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR TCA 90 bp GTAAAGGCACATGGGCTACCGCCACACACACTGCAGGCAGGAACCCAGTCTGGGATATCAAAGCGGGCCTaGCAGGCTGGGTGGGAGTTT +
Preference number: 2 (lower is better)
Translates to: VKAHGLPPHTLQAGTQSGISKRA*QAGWEF
Trigger: AAACTCCCACCCAGCCTGTCAGGCCCGCTTTGATAT...CCCAGACTGGGTTCCTGCCTGCAGTGTGTGTGGCGGTAGCCCATGTGCCTTTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR TCA 90 bp GTAAAGGCACATGGGCTACCGCCACACACACTGCAGGCAGGAACCCAGTCTGGGCTAGACTTTCAGAGCTaGTACTGGGAGGGCGCAACT +
Preference number: 2 (lower is better)
Translates to: VKAHGLPPHTLQAGTQSGLDFQS*YWEGAT
Trigger: AGTTGCGCCCTCCCAGTATCAGCTCTGAAAGTCTAG...CCCAGACTGGGTTCCTGCCTGCAGTGTGTGTGGCGGTAGCCCATGTGCCTTTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR CCA 90 bp GTAAAGGCACATGGGCTACCGCCACACACACTGCAGGCAGGAACCCAGTCTGGGAGCAGACAACAGCAGTaGCACAGCAGCACAGAGCAA +
Preference number: 2 (lower is better)
Translates to: VKAHGLPPHTLQAGTQSGSRQQQ*HSSTEQ
Trigger: TTGCTCTGTGCTGCTGTGCCACTGCTGTTGTCTGCT...CCCAGACTGGGTTCCTGCCTGCAGTGTGTGTGGCGGTAGCCCATGTGCCTTTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR CAA 90 bp TCTCACAAGAAGAGTTCTGGGCGGGAACCCTCTTATTTTCAACCATaGGGCCTCCTGCCCTCCCACCACAAAGGACGGGAGGGAGACAGG +
Preference number: 2 (lower is better)
Translates to: SHKKSSGREPSYFQP*GLLPSHHKGREGDR
Trigger: CCTGTCTCCCTCCCGTCCTTTGTGGTGGGAGGGCAGGAGGCCCAATGGTTGAAAATAAGAGGGTTCCCGCCCAGAACTCTTCTTGTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR TCA 90 bp GTAAAGGCACATGGGCTACCGCCACACACACTGCAGGCAGGAACCCAGTCTGGGGGGTGGACAATACCCTaGGTTGCCTTCAAGAGTCTA +
Preference number: 2 (lower is better)
Translates to: VKAHGLPPHTLQAGTQSGGWTIP*VAFKSL
Trigger: TAGACTCTTGAAGGCAACTCAGGGTATTGTCCACCC...CCCAGACTGGGTTCCTGCCTGCAGTGTGTGTGGCGGTAGCCCATGTGCCTTTAC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR GCA 90 bp GTAAAGGCACATGGGCTACCGCCACACACACTGCAGGCAGGAACCCAGTCTGGGCCTCTGCTTGGCATGTaGAAATCCTCTCGATGCTCA +
Preference number: 2 (lower is better)
Translates to: VKAHGLPPHTLQAGTQSGPLLGM*KSSRCS
Trigger: TGAGCATCGAGAGGATTTGCACATGCCAAGCAGAGG...CCCAGACTGGGTTCCTGCCTGCAGTGTGTGTGGCGGTAGCCCATGTGCCTTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR GCA 90 bp ACTTCAACTGTGAGCCAATCACGTCTGCCCCATGAGGAAGACGTAGCTCAGTGGGGTGTCCTGAGAGGGTaGCATGGGGTCACGAGCAAC +
Preference number: 2 (lower is better)
Translates to: TSTVSQSRLPHEEDVAQWGVLRG*HGVTSN
Trigger: GTTGCTCGTGACCCCATGGCACCCTCTCAGGACACC...CCACTGAGCTACGTCTTCCTCATGGGGCAGACGTGATTGGCTCACAGTTGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR CCA 90 bp GTAAAGGCACATGGGCTACCGCCACACACACTGCAGGCAGGAACCCAGTCTGGGCAAGTCACATCTGCATaGTGCCACATTAAGGGAGGC +
Preference number: 2 (lower is better)
Translates to: VKAHGLPPHTLQAGTQSGQVTSA*CHIKGG
Trigger: GCCTCCCTTAATGTGGCACCATGCAGATGTGACTTG...CCCAGACTGGGTTCCTGCCTGCAGTGTGTGTGGCGGTAGCCCATGTGCCTTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR GCA 90 bp ACTTCAACTGTGAGCCAATCACGTCTGCCCCATGAGGAAGACGTAGCTCAGTGGAACCATTGGGCCTCCTaGCCTCCCACCACAAAGGAC +
Preference number: 2 (lower is better)
Translates to: TSTVSQSRLPHEEDVAQWNHWAS*PPTTKD
Trigger: GTCCTTTGTGGTGGGAGGGCAGGAGGCCCAATGGTT...CCACTGAGCTACGTCTTCCTCATGGGGCAGACGTGATTGGCTCACAGTTGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR GCA 90 bp GGGTTCCTGAGGGCACTGAAGCCACATCCTTTCCGATTTAACAGCCCATCAACATCCCGTAGATCATGGTaGTCCCCAACCCCCAACCCC +
Preference number: 2 (lower is better)
Translates to: GFLRALKPHPFRFNSPSTSRRSW*SPTPNP
Trigger: GGGGTTGGGGGTTGGGGAGCACCATGATCTACGGGA...TGTTGATGGGCTGTTAAATCGGAAAGGATGTGGCTTCAGTGCCCTCAGGAACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR CCA 90 bp TTCCCCCAAATCTCACTGCCAAGAGAGCCACCCTCTGCTTGGCATGTGCAAATCACAGAGGCTCACCTCTaGGGAGAAAGCCCCAGTCCT +
Preference number: 2 (lower is better)
Translates to: FPQISLPREPPSAWHVQITEAHL*GESPSP
Trigger: AGGACTGGGGCTTTCTCCCCAGAGGTGAGCCTCTGT...GATTTGCACATGCCAAGCAGAGGGTGGCTCTCTTGGCAGTGAGATTTGGGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR TCA 90 bp GGGTTCCTGAGGGCACTGAAGCCACATCCTTTCCGATTTAACAGCCCATCAACACAGTGCAGCTACACATaGGGCCCAGGTCAAGACACC +
Preference number: 2 (lower is better)
Translates to: GFLRALKPHPFRFNSPSTQCSYT*GPGQDT
Trigger: GGTGTCTTGACCTGGGCCTCATGTGTAGCTGCACTG...TGTTGATGGGCTGTTAAATCGGAAAGGATGTGGCTTCAGTGCCCTCAGGAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR GCA 90 bp CTGGCAGAACACAGGTTAAAAATGGACAGGATGCCTGAGAGTCTACATGGCCAGTCCCGTAGATCATGGTaGTCCCCAACCCCCAACCCC +
Preference number: 2 (lower is better)
Translates to: LAEHRLKMDRMPESLHGQSRRSW*SPTPNP
Trigger: GGGGTTGGGGGTTGGGGAGCACCATGATCTACGGGA...CTGGCCATGTAGACTCTCAGGCATCCTGTCCATTTTTAACCTGTGTTCTGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR CCA 90 bp GCTCTCAGCCAAATCAAGTCACATCTGCATGGTGCCACATTAAGGGAGGCGCCGGAAGCAGCAGAGAAATaGGGGCAACACAGGGAAAGG +
Preference number: 2 (lower is better)
Translates to: ALSQIKSHLHGATLREAPEAAEK*GQHRER
Trigger: CCTTTCCCTGTGTTGCCCCCATTTCTCTGCTGCTTC...CGGCGCCTCCCTTAATGTGGCACCATGCAGATGTGACTTGATTTGGCTGAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR TCA 90 bp CAAAAACTAGAGGTCTTAGTGGACAAAGGCAGTGCAGCTACACATGAGGCCCAGAGCGGAATGGTGAGGTaGGATGGGAACGGGCAGAAG +
Preference number: 2 (lower is better)
Translates to: QKLEVLVDKGSAATHEAQSGMVR*DGNGQK
Trigger: CTTCTGCCCGTTCCCATCTCACCTCACCATTCCGCT...CTGGGCCTCATGTGTAGCTGCACTGCCTTTGTCCACTAAGACCTCTAGTTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR TCA 90 bp CTGGCAGAACACAGGTTAAAAATGGACAGGATGCCTGAGAGTCTACATGGCCAGAGCGGAATGGTGAGGTaGGATGGGAACGGGCAGAAG +
Preference number: 2 (lower is better)
Translates to: LAEHRLKMDRMPESLHGQSGMVR*DGNGQK
Trigger: CTTCTGCCCGTTCCCATCTCACCTCACCATTCCGCT...CTGGCCATGTAGACTCTCAGGCATCCTGTCCATTTTTAACCTGTGTTCTGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR TCA 90 bp GTAAAGGCACATGGGCTACCGCCACACACACTGCAGGCAGGAACCCAGTCTGGGACAACCTTTAGCACCTaGACACTAAGAATGACTTCG +
Preference number: 2 (lower is better)
Translates to: VKAHGLPPHTLQAGTQSGTTFST*TLRMTS
Trigger: CGAAGTCATTCTTAGTGTTCAGGTGCTAAAGGTTGT...CCCAGACTGGGTTCCTGCCTGCAGTGTGTGTGGCGGTAGCCCATGTGCCTTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR TCA 90 bp GCACTGAAGCCACATCCTTTCCGATTTAACAGCCCATCAACAGCATCCCCACCTCAACAGGCAGGACAATaGGCAGACAACAGCAGTGGC +
Preference number: 2 (lower is better)
Translates to: ALKPHPFRFNSPSTASPPQQAGQ*ADNSSG
Trigger: GCCACTGCTGTTGTCTGCTCATTGTCCTGCCTGTTG...AGGTGGGGATGCTGTTGATGGGCTGTTAAATCGGAAAGGATGTGGCTTCAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR GCA 90 bp GGGTTCCTGAGGGCACTGAAGCCACATCCTTTCCGATTTAACAGCCCATCAACACCTGCTCCCAAAGCCTaGACTTTCCCTTGTAGGAGC +
Preference number: 2 (lower is better)
Translates to: GFLRALKPHPFRFNSPSTPAPKA*TFPCRS
Trigger: GCTCCTACAAGGGAAAGTGCAGGCTTTGGGAGCAGG...TGTTGATGGGCTGTTAAATCGGAAAGGATGTGGCTTCAGTGCCCTCAGGAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR GCA 90 bp CTGGCAGAACACAGGTTAAAAATGGACAGGATGCCTGAGAGTCTACATGGCCAGCCTCCCTCTGCCACCTaGTCCCAAAGCCTGCACTTT +
Preference number: 2 (lower is better)
Translates to: LAEHRLKMDRMPESLHGQPPSAT*SQSLHF
Trigger: AAAGTGCAGGCTTTGGGAGCAGGTGGCAGAGGGAGG...CTGGCCATGTAGACTCTCAGGCATCCTGTCCATTTTTAACCTGTGTTCTGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR CCA 90 bp CAAAAACTAGAGGTCTTAGTGGACAAAGGCAGTGCAGCTACACATGAGGCCCAGACAGAGGCTCACCTCTaGGGAGAAAGCCCCAGTCCT +
Preference number: 2 (lower is better)
Translates to: QKLEVLVDKGSAATHEAQTEAHL*GESPSP
Trigger: AGGACTGGGGCTTTCTCCCCAGAGGTGAGCCTCTGT...CTGGGCCTCATGTGTAGCTGCACTGCCTTTGTCCACTAAGACCTCTAGTTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR CCA 90 bp ATGGGGGCAACACAGGGAAAGGATGTGATCTCCAATGCAGCACAAGGTCGGTGGTCCCCATTTGGCAGCTaGGGAGGAAGTGAAAGAGAT +
Preference number: 2 (lower is better)
Translates to: MGATQGKDVISNAAQGRWSPFGS*GGSERD
Trigger: ATCTCTTTCACTTCCTCCCCAGCTGCCAAATGGGGA...CCACCGACCTTGTGCTGCATTGGAGATCACATCCTTTCCCTGTGTTGCCCCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR TCA 90 bp CAAAAACTAGAGGTCTTAGTGGACAAAGGCAGTGCAGCTACACATGAGGCCCAGATATCAAAGCGGGCCTaGCAGGCTGGGTGGGAGTTT +
Preference number: 2 (lower is better)
Translates to: QKLEVLVDKGSAATHEAQISKRA*QAGWEF
Trigger: AAACTCCCACCCAGCCTGTCAGGCCCGCTTTGATAT...CTGGGCCTCATGTGTAGCTGCACTGCCTTTGTCCACTAAGACCTCTAGTTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR TCA 90 bp GGGTTCCTGAGGGCACTGAAGCCACATCCTTTCCGATTTAACAGCCCATCAACAAATGGACAGGATGCCTaGGAGTCTACATGGCCAGAC +
Preference number: 2 (lower is better)
Translates to: GFLRALKPHPFRFNSPSTNGQDA*ESTWPD
Trigger: GTCTGGCCATGTAGACTCTCAGGCATCCTGTCCATT...TGTTGATGGGCTGTTAAATCGGAAAGGATGTGGCTTCAGTGCCCTCAGGAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR GCA 90 bp ACTTCAACTGTGAGCCAATCACGTCTGCCCCATGAGGAAGACGTAGCTCAGTGGCCTCTGCTTGGCATGTaGAAATCCTCTCGATGCTCA +
Preference number: 2 (lower is better)
Translates to: TSTVSQSRLPHEEDVAQWPLLGM*KSSRCS
Trigger: TGAGCATCGAGAGGATTTGCACATGCCAAGCAGAGG...CCACTGAGCTACGTCTTCCTCATGGGGCAGACGTGATTGGCTCACAGTTGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR GCA 90 bp CACAGCAGCACAGAGCAAACAAAGCCCATAGTGTTAAGACCAAATGGAACCCTAGGTGTCCTGAGAGGGTaGCATGGGGTCACGAGCAAC +
Preference number: 2 (lower is better)
Translates to: HSSTEQTKPIVLRPNGTLGVLRG*HGVTSN
Trigger: GTTGCTCGTGACCCCATGGCACCCTCTCAGGACACC...TAGGGTTCCATTTGGTCTTAACACTATGGGCTTTGTTTGCTCTGTGCTGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR GCA 90 bp ATGGGGGCAACACAGGGAAAGGATGTGATCTCCAATGCAGCACAAGGTCGGTGGGTTTCTCCACTATATTaGTGCCGGTGGAAGAGGACA +
Preference number: 2 (lower is better)
Translates to: MGATQGKDVISNAAQGRWVSPLY*CRWKRT
Trigger: TGTCCTCTTCCACCGGCAGCAATATAGTGGAGAAAC...CCACCGACCTTGTGCTGCATTGGAGATCACATCCTTTCCCTGTGTTGCCCCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR CCA 90 bp GCACTGAAGCCACATCCTTTCCGATTTAACAGCCCATCAACAGCATCCCCACCTCTTATTTTCAACCATTaGGCCTCCTGCCCTCCCACC +
Preference number: 2 (lower is better)
Translates to: ALKPHPFRFNSPSTASPPLIFNH*ASCPPT
Trigger: GGTGGGAGGGCAGGAGGCCCAATGGTTGAAAATAAG...AGGTGGGGATGCTGTTGATGGGCTGTTAAATCGGAAAGGATGTGGCTTCAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR TCA 90 bp GCACTGAAGCCACATCCTTTCCGATTTAACAGCCCATCAACAGCATCCCCACCTGGGTGGACAATACCCTaGGTTGCCTTCAAGAGTCTA +
Preference number: 2 (lower is better)
Translates to: ALKPHPFRFNSPSTASPPGWTIP*VAFKSL
Trigger: TAGACTCTTGAAGGCAACTCAGGGTATTGTCCACCC...AGGTGGGGATGCTGTTGATGGGCTGTTAAATCGGAAAGGATGTGGCTTCAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR TCA 90 bp ACTTCAACTGTGAGCCAATCACGTCTGCCCCATGAGGAAGACGTAGCTCAGTGGGGCCAGGTCTATCTATaGAGGAAATGCCACACTCAT +
Preference number: 2 (lower is better)
Translates to: TSTVSQSRLPHEEDVAQWGQVYL*RKCHTH
Trigger: ATGAGTGTGGCATTTCCTTCATAGATAGACCTGGCC...CCACTGAGCTACGTCTTCCTCATGGGGCAGACGTGATTGGCTCACAGTTGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR GCA 90 bp CAAAAACTAGAGGTCTTAGTGGACAAAGGCAGTGCAGCTACACATGAGGCCCAGACTCCTACCCTTTCTTaGTCCAAGCCTGCAAGTCCC +
Preference number: 2 (lower is better)
Translates to: QKLEVLVDKGSAATHEAQTPTLS*SKPASP
Trigger: GGGACTTGCAGGCTTGGAGCAAGAAAGGGTAGGAGT...CTGGGCCTCATGTGTAGCTGCACTGCCTTTGTCCACTAAGACCTCTAGTTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR CCA 90 bp CAAAAACTAGAGGTCTTAGTGGACAAAGGCAGTGCAGCTACACATGAGGCCCAGCTTATTTTCAACCATTaGGCCTCCTGCCCTCCCACC +
Preference number: 2 (lower is better)
Translates to: QKLEVLVDKGSAATHEAQLIFNH*ASCPPT
Trigger: GGTGGGAGGGCAGGAGGCCCAATGGTTGAAAATAAG...CTGGGCCTCATGTGTAGCTGCACTGCCTTTGTCCACTAAGACCTCTAGTTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR CAA 90 bp ACACAGGGAAAGGATGTGATCTCCAATGCAGCACAAGGTCGGTGGTaGATTCTGACAGAAAGCAGAGACTTCAGTACTTGCGGTCAGGCT +
Preference number: 2 (lower is better)
Translates to: TQGKDVISNAAQGRW*ILTESRDFSTCGQA
Trigger: AGCCTGACCGCAAGTACTGAAGTCTCTGCTTTCTGTCAGAATCAACCACCGACCTTGTGCTGCATTGGAGATCACATCCTTTCCCTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR CCA 90 bp GGGTTCCTGAGGGCACTGAAGCCACATCCTTTCCGATTTAACAGCCCATCAACACAACACACCCTGCTTTaGGAGGCTGTCTTAATGTCT +
Preference number: 2 (lower is better)
Translates to: GFLRALKPHPFRFNSPSTQHTLL*EAVLMS
Trigger: AGACATTAAGACAGCCTCCCAAAGCAGGGTGTGTTG...TGTTGATGGGCTGTTAAATCGGAAAGGATGTGGCTTCAGTGCCCTCAGGAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR CAA 90 bp CTGATTTTGGAATGTGTCTTATCCTATGTGCACTCCTACCCTTTCTaGCTCCAAGCCTGCAAGTCCCCATCTCAGCACCCTCTAAAGGTG +
Preference number: 2 (lower is better)
Translates to: LILECVLSYVHSYPF*LQACKSPSQHPLKV
Trigger: CACCTTTAGAGGGTGCTGAGATGGGGACTTGCAGGCTTGGAGCAAGAAAGGGTAGGAGTGCACATAGGATAAGACACATTCCAAAATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR CAA 90 bp TCCCATGGCCAATTGGATCAATCTGGTTATCTTTACCCCAATGGCTaGAGTCTTTCCCATCTTCAGCTAACACCAGTGCGACCACCCAAC +
Preference number: 2 (lower is better)
Translates to: SHGQLDQSGYLYPNG*SLSHLQLTPVRPPN
Trigger: GTTGGGTGGTCGCACTGGTGTTAGCTGAAGATGGGAAAGACTCAAGCCATTGGGGTAAAGATAACCAGATTGATCCAATTGGCCATGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR TCA 90 bp ACTTCAACTGTGAGCCAATCACGTCTGCCCCATGAGGAAGACGTAGCTCAGTGGACAACCTTTAGCACCTaGACACTAAGAATGACTTCG +
Preference number: 2 (lower is better)
Translates to: TSTVSQSRLPHEEDVAQWTTFST*TLRMTS
Trigger: CGAAGTCATTCTTAGTGTTCAGGTGCTAAAGGTTGT...CCACTGAGCTACGTCTTCCTCATGGGGCAGACGTGATTGGCTCACAGTTGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR TCA 90 bp CTGGCAGAACACAGGTTAAAAATGGACAGGATGCCTGAGAGTCTACATGGCCAGAAGCAGCCCAAGCAGTaGTTTGACTTCAACTGTGAG +
Preference number: 2 (lower is better)
Translates to: LAEHRLKMDRMPESLHGQKQPKQ*FDFNCE
Trigger: CTCACAGTTGAAGTCAAATCACTGCTTGGGCTGCTT...CTGGCCATGTAGACTCTCAGGCATCCTGTCCATTTTTAACCTGTGTTCTGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR GCA 90 bp AAAAGTGCATTTATTACTATTATTCCTGCCGAGAAGGCTCAGCAGGGCAAGCCACCTGCTCCCAAAGCCTaGACTTTCCCTTGTAGGAGC +
Preference number: 2 (lower is better)
Translates to: KSAFITIIPAEKAQQGKPPAPKA*TFPCRS
Trigger: GCTCCTACAAGGGAAAGTGCAGGCTTTGGGAGCAGG...TGGCTTGCCCTGCTGAGCCTTCTCGGCAGGAATAATAGTAATAAATGCACTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR CCA 90 bp AACTCTTCAATGTTCCTGCTCAGTGCAGGGTTAAATTATGCTACCATTCTGTTCCTCCACAGTCCCGACTaGGTTCCTGGCAAGGCAGTC +
Preference number: 2 (lower is better)
Translates to: NSSMFLLSAGLNYATILFLHSPD*VPGKAV
Trigger: GACTGCCTTGCCAGGAACCCAGTCGGGACTGTGGAG...GAACAGAATGGTAGCATAATTTAACCCTGCACTGAGCAGGAACATTGAAGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR CAA 90 bp TGTCCTGCTCACTTCCAAGACTATGGCCTAAGCTCCCATGGCCAATaGGATCAATCTGGTTATCTTTACCCCAATGGCTTGAGTCTTTCC +
Preference number: 2 (lower is better)
Translates to: CPAHFQDYGLSSHGQ*DQSGYLYPNGLSLS
Trigger: GGAAAGACTCAAGCCATTGGGGTAAAGATAACCAGATTGATCCAATTGGCCATGGGAGCTTAGGCCATAGTCTTGGAAGTGAGCAGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR TCA 90 bp AAAAGTGCATTTATTACTATTATTCCTGCCGAGAAGGCTCAGCAGGGCAAGCCAGAAACAGTCAGGAGATaGGGCCATCTCCTATGGCTC +
Preference number: 2 (lower is better)
Translates to: KSAFITIIPAEKAQQGKPETVRR*GHLLWL
Trigger: GAGCCATAGGAGATGGCCTCATCTCCTGACTGTTTC...TGGCTTGCCCTGCTGAGCCTTCTCGGCAGGAATAATAGTAATAAATGCACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR GCA 90 bp CAAAAACTAGAGGTCTTAGTGGACAAAGGCAGTGCAGCTACACATGAGGCCCAGGTGTCTTATCCTATGTaGACTCCTACCCTTTCTTGC +
Preference number: 2 (lower is better)
Translates to: QKLEVLVDKGSAATHEAQVSYPM*TPTLSC
Trigger: GCAAGAAAGGGTAGGAGTGCACATAGGATAAGACAC...CTGGGCCTCATGTGTAGCTGCACTGCCTTTGTCCACTAAGACCTCTAGTTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR GCA 90 bp ACCATAAAGGAGAGAGAAAAGACCTGTTTGTTGTTCTCTCAAAGGCAGGCAAATCCTCCCTCTGCCACCTaGTCCCAAAGCCTGCACTTT +
Preference number: 2 (lower is better)
Translates to: TIKEREKTCLLFSQRQANPPSAT*SQSLHF
Trigger: AAAGTGCAGGCTTTGGGAGCAGGTGGCAGAGGGAGG...ATTTGCCTGCCTTTGAGAGAACAACAAACAGGTCTTTTCTCTCTCCTTTATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR GCA 90 bp AGACTGTTGAGTTTGCAATCTACTAGGGAAAGATCTAGGCTTAACAGGAGAACAAACCATTGGGCCTCCTaGCCTCCCACCACAAAGGAC +
Preference number: 2 (lower is better)
Translates to: RLLSLQSTRERSRLNRRTNHWAS*PPTTKD
Trigger: GTCCTTTGTGGTGGGAGGGCAGGAGGCCCAATGGTT...TGTTCTCCTGTTAAGCCTAGATCTTTCCCTAGTAGATTGCAAACTCAACAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR CCA 90 bp AAAAGTGCATTTATTACTATTATTCCTGCCGAGAAGGCTCAGCAGGGCAAGCCATCCCGACTGGGTTCCTaGCAAGGCAGTCCTTCATTT +
Preference number: 2 (lower is better)
Translates to: KSAFITIIPAEKAQQGKPSRLGS*QGSPSF
Trigger: AAATGAAGGACTGCCTTGCCAGGAACCCAGTCGGGA...TGGCTTGCCCTGCTGAGCCTTCTCGGCAGGAATAATAGTAATAAATGCACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR CCA 90 bp CACAGCAGCACAGAGCAAACAAAGCCCATAGTGTTAAGACCAAATGGAACCCTAAATGCTGAGAGGCAATaGATTGCAGTGGGAGGAAGC +
Preference number: 2 (lower is better)
Translates to: HSSTEQTKPIVLRPNGTLNAERQ*IAVGGS
Trigger: GCTTCCTCCCACTGCAATCCATTGCCTCTCAGCATT...TAGGGTTCCATTTGGTCTTAACACTATGGGCTTTGTTTGCTCTGTGCTGCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR CCA 90 bp CACAGCAGCACAGAGCAAACAAAGCCCATAGTGTTAAGACCAAATGGAACCCTATCCCCATTTGGCAGCTaGGGAGGAAGTGAAAGAGAT +
Preference number: 2 (lower is better)
Translates to: HSSTEQTKPIVLRPNGTLSPFGS*GGSERD
Trigger: ATCTCTTTCACTTCCTCCCCAGCTGCCAAATGGGGA...TAGGGTTCCATTTGGTCTTAACACTATGGGCTTTGTTTGCTCTGTGCTGCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR CAA 90 bp AGTCTGGGGCCATCTTTACTGCCAGGCATTTACAGTGGAATGGCTTaGGGATCACACAGACTGTTGAGTTTGCAATCTACTAGGGAAAGA +
Preference number: 2 (lower is better)
Translates to: SLGPSLLPGIYSGMA*GSHRLLSLQSTRER
Trigger: TCTTTCCCTAGTAGATTGCAAACTCAACAGTCTGTGTGATCCCAAAGCCATTCCACTGTAAATGCCTGGCAGTAAAGATGGCCCCAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR TCA 90 bp CAAAAACTAGAGGTCTTAGTGGACAAAGGCAGTGCAGCTACACATGAGGCCCAGGTTACTACTACAGACTaGATGAATATCAAAGCGGGC +
Preference number: 2 (lower is better)
Translates to: QKLEVLVDKGSAATHEAQVTTTD*MNIKAG
Trigger: GCCCGCTTTGATATTCATTCAGTCTGTAGTAGTAAC...CTGGGCCTCATGTGTAGCTGCACTGCCTTTGTCCACTAAGACCTCTAGTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR GCA 90 bp AACTCTTCAATGTTCCTGCTCAGTGCAGGGTTAAATTATGCTACCATTCTGTTCTCCCCCAAATCTCACTaGCAAGAGAGCCACCCTCTG +
Preference number: 2 (lower is better)
Translates to: NSSMFLLSAGLNYATILFSPKSH*QESHPL
Trigger: CAGAGGGTGGCTCTCTTGGCAGTGAGATTTGGGGGA...GAACAGAATGGTAGCATAATTTAACCCTGCACTGAGCAGGAACATTGAAGAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR GCA 90 bp AAAAGTGCATTTATTACTATTATTCCTGCCGAGAAGGCTCAGCAGGGCAAGCCAGGATGTGATCTCCAATaGAGCACAAGGTCGGTGGTT +
Preference number: 2 (lower is better)
Translates to: KSAFITIIPAEKAQQGKPGCDLQ*STRSVV
Trigger: AACCACCGACCTTGTGCTGCATTGGAGATCACATCC...TGGCTTGCCCTGCTGAGCCTTCTCGGCAGGAATAATAGTAATAAATGCACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR CAA 90 bp AAAGAACAACTGACAGCTGCAAAGACCCAGATGCTGATTTTATTATaGCATAATGTGGGAGACCTTTCCTACCCTGGGGAAGCTAGACGG +
Preference number: 2 (lower is better)
Translates to: KEQLTAAKTQMLILL*HNVGDLSYPGEARR
Trigger: CCGTCTAGCTTCCCCAGGGTAGGAAAGGTCTCCCACATTATGCAATAATAAAATCAGCATCTGGGTCTTTGCAGCTGTCAGTTGTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR CAA 90 bp CTGCCAGGCATTTACAGTGGAATGGCTTTGGGATCACACAGACTGTaGAGTTTGCAATCTACTAGGGAAAGATCTAGGCTTAACAGGAGA +
Preference number: 2 (lower is better)
Translates to: LPGIYSGMALGSHRL*SLQSTRERSRLNRR
Trigger: TCTCCTGTTAAGCCTAGATCTTTCCCTAGTAGATTGCAAACTCAACAGTCTGTGTGATCCCAAAGCCATTCCACTGTAAATGCCTGGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR TCA 90 bp GATCTCCAATGCAGCACAAGGTCGGTGGTTGATTCTGACAGAAAGCAGAGACTTAAAACAGGGAGGCCCTaGTTTTGGAATGTGTCTTAT +
Preference number: 2 (lower is better)
Translates to: DLQCSTRSVVDSDRKQRLKTGRP*FWNVSY
Trigger: ATAAGACACATTCCAAAATCAGGGCCTCCCTGTTTT...AAGTCTCTGCTTTCTGTCAGAATCAACCACCGACCTTGTGCTGCATTGGAGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR TCA 90 bp GATCTCCAATGCAGCACAAGGTCGGTGGTTGATTCTGACAGAAAGCAGAGACTTGTTACTACTACAGACTaGATGAATATCAAAGCGGGC +
Preference number: 2 (lower is better)
Translates to: DLQCSTRSVVDSDRKQRLVTTTD*MNIKAG
Trigger: GCCCGCTTTGATATTCATTCAGTCTGTAGTAGTAAC...AAGTCTCTGCTTTCTGTCAGAATCAACCACCGACCTTGTGCTGCATTGGAGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR TCA 90 bp AAAAGTGCATTTATTACTATTATTCCTGCCGAGAAGGCTCAGCAGGGCAAGCCACAGCTGGGGAGGAAGTaGAAGAGATATCACAAGACT +
Preference number: 2 (lower is better)
Translates to: KSAFITIIPAEKAQQGKPQLGRK*KRYHKT
Trigger: AGTCTTGTGATATCTCTTTCACTTCCTCCCCAGCTG...TGGCTTGCCCTGCTGAGCCTTCTCGGCAGGAATAATAGTAATAAATGCACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR GCA 90 bp CTGGCAGAACACAGGTTAAAAATGGACAGGATGCCTGAGAGTCTACATGGCCAGGCCTTTCAAAAGCTTTaGCTAAGTCCCAACATCTAT +
Preference number: 2 (lower is better)
Translates to: LAEHRLKMDRMPESLHGQAFQKL*LSPNIY
Trigger: ATAGATGTTGGGACTTAGGCAAAGCTTTTGAAAGGC...CTGGCCATGTAGACTCTCAGGCATCCTGTCCATTTTTAACCTGTGTTCTGCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR GCA 90 bp AAAAGTGCATTTATTACTATTATTCCTGCCGAGAAGGCTCAGCAGGGCAAGCCAGTTTCTCCACTATATTaGTGCCGGTGGAAGAGGACA +
Preference number: 2 (lower is better)
Translates to: KSAFITIIPAEKAQQGKPVSPLY*CRWKRT
Trigger: TGTCCTCTTCCACCGGCAGCAATATAGTGGAGAAAC...TGGCTTGCCCTGCTGAGCCTTCTCGGCAGGAATAATAGTAATAAATGCACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR CCA 90 bp GCACTGAAGCCACATCCTTTCCGATTTAACAGCCCATCAACAGCATCCCCACCTTGTGATCATCATATTTaGCTCTTTCTTTGCTTCCTC +
Preference number: 2 (lower is better)
Translates to: ALKPHPFRFNSPSTASPPCDHHI*LFLCFL
Trigger: GAGGAAGCAAAGAAAGAGCCAAATATGATGATCACA...AGGTGGGGATGCTGTTGATGGGCTGTTAAATCGGAAAGGATGTGGCTTCAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR CCA 90 bp CACAGCAGCACAGAGCAAACAAAGCCCATAGTGTTAAGACCAAATGGAACCCTATCACAAGAAGAGTTCTaGGCGGGAACCCTCTTATTT +
Preference number: 2 (lower is better)
Translates to: HSSTEQTKPIVLRPNGTLSQEEF*AGTLLF
Trigger: AAATAAGAGGGTTCCCGCCCAGAACTCTTCTTGTGA...TAGGGTTCCATTTGGTCTTAACACTATGGGCTTTGTTTGCTCTGTGCTGCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR CCA 90 bp CTGGCAGAACACAGGTTAAAAATGGACAGGATGCCTGAGAGTCTACATGGCCAGGGCTCAGTTTCTTTCTaGTTTCTCCACTATATTGCT +
Preference number: 2 (lower is better)
Translates to: LAEHRLKMDRMPESLHGQGSVSF*FLHYIA
Trigger: AGCAATATAGTGGAGAAACCAGAAAGAAACTGAGCC...CTGGCCATGTAGACTCTCAGGCATCCTGTCCATTTTTAACCTGTGTTCTGCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR CCA 90 bp CACAGCAGCACAGAGCAAACAAAGCCCATAGTGTTAAGACCAAATGGAACCCTAGCCACACTCATTCCCTaGGAGAAGTCTAACTACATA +
Preference number: 2 (lower is better)
Translates to: HSSTEQTKPIVLRPNGTLATLIP*EKSNYI
Trigger: TATGTAGTTAGACTTCTCCCAGGGAATGAGTGTGGC...TAGGGTTCCATTTGGTCTTAACACTATGGGCTTTGTTTGCTCTGTGCTGCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR CAA 90 bp GTAAACTTAGTCCTAGGAAGTTATCACATCTCTAAAACATGGTCTTaGTCCTGCTCACTTCCAAGACTATGGCCTAAGCTCCCATGGCCA +
Preference number: 2 (lower is better)
Translates to: VNLVLGSYHISKTWS*SCSLPRLWPKLPWP
Trigger: TGGCCATGGGAGCTTAGGCCATAGTCTTGGAAGTGAGCAGGACAAAGACCATGTTTTAGAGATGTGATAACTTCCTAGGACTAAGTTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR TCA 90 bp CTGGCAGAACACAGGTTAAAAATGGACAGGATGCCTGAGAGTCTACATGGCCAGTGCTACTATAAGCTGTaGTCATCATATTTGGCTCTT +
Preference number: 2 (lower is better)
Translates to: LAEHRLKMDRMPESLHGQCYYKL*SSYLAL
Trigger: AAGAGCCAAATATGATGATCACAGCTTATAGTAGCA...CTGGCCATGTAGACTCTCAGGCATCCTGTCCATTTTTAACCTGTGTTCTGCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR TCA 90 bp AAAAGTGCATTTATTACTATTATTCCTGCCGAGAAGGCTCAGCAGGGCAAGCCACCTCCCTGTTCAATATaGCTGAGCTACACAGTCATA +
Preference number: 2 (lower is better)
Translates to: KSAFITIIPAEKAQQGKPPPCSI*LSYTVI
Trigger: TATGACTGTGTAGCTCAGTCATATTGAACAGGGAGG...TGGCTTGCCCTGCTGAGCCTTCTCGGCAGGAATAATAGTAATAAATGCACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR GCA 90 bp CAAAAACTAGAGGTCTTAGTGGACAAAGGCAGTGCAGCTACACATGAGGCCCAGAATCACCCTTTAAAGTaGACATCTCTCACAAGAAGA +
Preference number: 2 (lower is better)
Translates to: QKLEVLVDKGSAATHEAQNHPLK*TSLTRR
Trigger: TCTTCTTGTGAGAGATGTGCACTTTAAAGGGTGATT...CTGGGCCTCATGTGTAGCTGCACTGCCTTTGTCCACTAAGACCTCTAGTTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR CCA 90 bp AAAAGTGCATTTATTACTATTATTCCTGCCGAGAAGGCTCAGCAGGGCAAGCCAGCCACACTCATTCCCTaGGAGAAGTCTAACTACATA +
Preference number: 2 (lower is better)
Translates to: KSAFITIIPAEKAQQGKPATLIP*EKSNYI
Trigger: TATGTAGTTAGACTTCTCCCAGGGAATGAGTGTGGC...TGGCTTGCCCTGCTGAGCCTTCTCGGCAGGAATAATAGTAATAAATGCACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR CAA 90 bp GGCATTTACAGTGGAATGGCTTTGGGATCACACAGACTGTTGAGTTaGCAATCTACTAGGGAAAGATCTAGGCTTAACAGGAGAACAAAG +
Preference number: 2 (lower is better)
Translates to: GIYSGMALGSHRLLS*QSTRERSRLNRRTK
Trigger: CTTTGTTCTCCTGTTAAGCCTAGATCTTTCCCTAGTAGATTGCAAACTCAACAGTCTGTGTGATCCCAAAGCCATTCCACTGTAAATGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR TCA 90 bp AAAAGTGCATTTATTACTATTATTCCTGCCGAGAAGGCTCAGCAGGGCAAGCCAAAAACAGGGAGGCCCTaGTTTTGGAATGTGTCTTAT +
Preference number: 2 (lower is better)
Translates to: KSAFITIIPAEKAQQGKPKTGRP*FWNVSY
Trigger: ATAAGACACATTCCAAAATCAGGGCCTCCCTGTTTT...TGGCTTGCCCTGCTGAGCCTTCTCGGCAGGAATAATAGTAATAAATGCACTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR TCA 90 bp ACCATAAAGGAGAGAGAAAAGACCTGTTTGTTGTTCTCTCAAAGGCAGGCAAATGGCCAGGTCTATCTATaGAGGAAATGCCACACTCAT +
Preference number: 2 (lower is better)
Translates to: TIKEREKTCLLFSQRQANGQVYL*RKCHTH
Trigger: ATGAGTGTGGCATTTCCTTCATAGATAGACCTGGCC...ATTTGCCTGCCTTTGAGAGAACAACAAACAGGTCTTTTCTCTCTCCTTTATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR TCA 90 bp ACCATAAAGGAGAGAGAAAAGACCTGTTTGTTGTTCTCTCAAAGGCAGGCAAATCAGCTGGGGAGGAAGTaGAAGAGATATCACAAGACT +
Preference number: 2 (lower is better)
Translates to: TIKEREKTCLLFSQRQANQLGRK*KRYHKT
Trigger: AGTCTTGTGATATCTCTTTCACTTCCTCCCCAGCTG...ATTTGCCTGCCTTTGAGAGAACAACAAACAGGTCTTTTCTCTCTCCTTTATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR TCA 90 bp AGACTGTTGAGTTTGCAATCTACTAGGGAAAGATCTAGGCTTAACAGGAGAACAAAGCAGCCCAAGCAGTaGTTTGACTTCAACTGTGAG +
Preference number: 2 (lower is better)
Translates to: RLLSLQSTRERSRLNRRTKQPKQ*FDFNCE
Trigger: CTCACAGTTGAAGTCAAATCACTGCTTGGGCTGCTT...TGTTCTCCTGTTAAGCCTAGATCTTTCCCTAGTAGATTGCAAACTCAACAGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR TCA 90 bp AGACTGTTGAGTTTGCAATCTACTAGGGAAAGATCTAGGCTTAACAGGAGAACATTTACCCCAATGGCTTaGGTCTTTCCCATCTTCAGC +
Preference number: 2 (lower is better)
Translates to: RLLSLQSTRERSRLNRRTFTPMA*VFPIFS
Trigger: GCTGAAGATGGGAAAGACTCAAGCCATTGGGGTAAA...TGTTCTCCTGTTAAGCCTAGATCTTTCCCTAGTAGATTGCAAACTCAACAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR CCA 90 bp CTGGCAGAACACAGGTTAAAAATGGACAGGATGCCTGAGAGTCTACATGGCCAGTCTTTCTCCAAGTTTTaGGAGTATTCTACCATTAAC +
Preference number: 2 (lower is better)
Translates to: LAEHRLKMDRMPESLHGQSFSKF*EYSTIN
Trigger: GTTAATGGTAGAATACTCCCAAAACTTGGAGAAAGA...CTGGCCATGTAGACTCTCAGGCATCCTGTCCATTTTTAACCTGTGTTCTGCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR TCA 90 bp AACTCTTCAATGTTCCTGCTCAGTGCAGGGTTAAATTATGCTACCATTCTGTTCTCCTCCAGGTCTTTCTaGAGTTACTACTACAGACTG +
Preference number: 2 (lower is better)
Translates to: NSSMFLLSAGLNYATILFSSRSF*SYYYRL
Trigger: CAGTCTGTAGTAGTAACTTCAGAAAGACCTGGAGGA...GAACAGAATGGTAGCATAATTTAACCCTGCACTGAGCAGGAACATTGAAGAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR GCA 90 bp AAAAGTGCATTTATTACTATTATTCCTGCCGAGAAGGCTCAGCAGGGCAAGCCAAACTTGAGGAGCTATTaGAGCCAAACTTCACTTTCT +
Preference number: 2 (lower is better)
Translates to: KSAFITIIPAEKAQQGKPNLRSY*SQTSLS
Trigger: AGAAAGTGAAGTTTGGCTGCAATAGCTCCTCAAGTT...TGGCTTGCCCTGCTGAGCCTTCTCGGCAGGAATAATAGTAATAAATGCACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR CCA 90 bp AACTCTTCAATGTTCCTGCTCAGTGCAGGGTTAAATTATGCTACCATTCTGTTCTCACAAGAAGAGTTCTaGGCGGGAACCCTCTTATTT +
Preference number: 2 (lower is better)
Translates to: NSSMFLLSAGLNYATILFSQEEF*AGTLLF
Trigger: AAATAAGAGGGTTCCCGCCCAGAACTCTTCTTGTGA...GAACAGAATGGTAGCATAATTTAACCCTGCACTGAGCAGGAACATTGAAGAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR CCA 90 bp AAAAGTGCATTTATTACTATTATTCCTGCCGAGAAGGCTCAGCAGGGCAAGCCACACATCTCTAAAACATaGTCTTTGTCCTGCTCACTT +
Preference number: 2 (lower is better)
Translates to: KSAFITIIPAEKAQQGKPHISKT*SLSCSL
Trigger: AAGTGAGCAGGACAAAGACCATGTTTTAGAGATGTG...TGGCTTGCCCTGCTGAGCCTTCTCGGCAGGAATAATAGTAATAAATGCACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR CAA 90 bp TCTCTTGTTCTGAGAAGTACCATAAAGGAGAGAGAAAAGACCTGTTaGTTGTTCTCTCAAAGGCAGGCAAATTTTTGGAGCCTAAGGGTT +
Preference number: 2 (lower is better)
Translates to: SLVLRSTIKEREKTC*LFSQRQANFWSLRV
Trigger: AACCCTTAGGCTCCAAAAATTTGCCTGCCTTTGAGAGAACAACAAACAGGTCTTTTCTCTCTCCTTTATGGTACTTCTCAGAACAAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR GCA 90 bp AACTCTTCAATGTTCCTGCTCAGTGCAGGGTTAAATTATGCTACCATTCTGTTCGCCTTTCAAAAGCTTTaGCTAAGTCCCAACATCTAT +
Preference number: 2 (lower is better)
Translates to: NSSMFLLSAGLNYATILFAFQKL*LSPNIY
Trigger: ATAGATGTTGGGACTTAGGCAAAGCTTTTGAAAGGC...GAACAGAATGGTAGCATAATTTAACCCTGCACTGAGCAGGAACATTGAAGAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR GCA 90 bp AGACTGTTGAGTTTGCAATCTACTAGGGAAAGATCTAGGCTTAACAGGAGAACAGACAATACCCTGAGTTaGCTTCAAGAGTCTAAAGAA +
Preference number: 2 (lower is better)
Translates to: RLLSLQSTRERSRLNRRTDNTLS*LQESKE
Trigger: TTCTTTAGACTCTTGAAGGCAACTCAGGGTATTGTC...TGTTCTCCTGTTAAGCCTAGATCTTTCCCTAGTAGATTGCAAACTCAACAGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR CCA 90 bp AACTCTTCAATGTTCCTGCTCAGTGCAGGGTTAAATTATGCTACCATTCTGTTCTGTGATCATCATATTTaGCTCTTTCTTTGCTTCCTC +
Preference number: 2 (lower is better)
Translates to: NSSMFLLSAGLNYATILFCDHHI*LFLCFL
Trigger: GAGGAAGCAAAGAAAGAGCCAAATATGATGATCACA...GAACAGAATGGTAGCATAATTTAACCCTGCACTGAGCAGGAACATTGAAGAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR CCA 90 bp AGACTGTTGAGTTTGCAATCTACTAGGGAAAGATCTAGGCTTAACAGGAGAACATCTTTCTCCAAGTTTTaGGAGTATTCTACCATTAAC +
Preference number: 2 (lower is better)
Translates to: RLLSLQSTRERSRLNRRTSFSKF*EYSTIN
Trigger: GTTAATGGTAGAATACTCCCAAAACTTGGAGAAAGA...TGTTCTCCTGTTAAGCCTAGATCTTTCCCTAGTAGATTGCAAACTCAACAGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR CCA 90 bp AGACTGTTGAGTTTGCAATCTACTAGGGAAAGATCTAGGCTTAACAGGAGAACACTTTTGGTCCAAAGATaGATCCTAGAGTTTAAAGAA +
Preference number: 2 (lower is better)
Translates to: RLLSLQSTRERSRLNRRTLLVQR*ILEFKE
Trigger: TTCTTTAAACTCTAGGATCCATCTTTGGACCAAAAG...TGTTCTCCTGTTAAGCCTAGATCTTTCCCTAGTAGATTGCAAACTCAACAGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR GCA 72 bp CCCATCTCAGCACCCTCTAAAGGTGTCCTGAGAGGGTaGCATGGGGTCACGAGCAACACACCCTGCTTTGGG +
Preference number: 3 (lower is better)
Translates to: PISAPSKGVLRG*HGVTSNTPCFG
Trigger: CCCAAAGCAGGGTGTGTTGCTCGTGACCCCATGGCACCCTCTCAGGACACCTTTAGAGGGTGCTGAGATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR GCA 72 bp GGCGGGAACCCTCTTATTTTCAACCATTGGGCCTCCTaGCCTCCCACCACAAAGGACGGGAGGGAGACAGGA +
Preference number: 3 (lower is better)
Translates to: GGNPLIFNHWAS*PPTTKDGRETG
Trigger: TCCTGTCTCCCTCCCGTCCTTTGTGGTGGGAGGGCAGGAGGCCCAATGGTTGAAAATAAGAGGGTTCCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR CCA 72 bp GGAGGGCGCAACTTAGGCCGGAATGCTGAGAGGCAATaGATTGCAGTGGGAGGAAGCCGAGTAGGTCCACTG +
Preference number: 3 (lower is better)
Translates to: GGRNLGRNAERQ*IAVGGSRVGPL
Trigger: CAGTGGACCTACTCGGCTTCCTCCCACTGCAATCCATTGCCTCTCAGCATTCCGGCCTAAGTTGCGCCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR TCA 72 bp TGCAAGTCCCCATCTCAGCACCCTCTAAAGGTGTCCTaGGAGGGTGCCATGGGGTCACGAGCAACACACCCT +
Preference number: 3 (lower is better)
Translates to: CKSPSQHPLKVS*EGAMGSRATHP
Trigger: AGGGTGTGTTGCTCGTGACCCCATGGCACCCTCTCAGGACACCTTTAGAGGGTGCTGAGATGGGGACTTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR GCA 72 bp AGCCACCCTCTGCTTGGCATGTGCAAATCCTCTCGATaGTCACAGAGGCTCACCTCTGGGGAGAAAGCCCCA +
Preference number: 3 (lower is better)
Translates to: SHPLLGMCKSSR*SQRLTSGEKAP
Trigger: TGGGGCTTTCTCCCCAGAGGTGAGCCTCTGTGAGCATCGAGAGGATTTGCACATGCCAAGCAGAGGGTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR CCA 72 bp GTGCAAATCCTCTCGATGCTCACAGAGGCTCACCTCTaGGGAGAAAGCCCCAGTCCTGGGTTGGGAAAGAGG +
Preference number: 3 (lower is better)
Translates to: VQILSMLTEAHL*GESPSPGLGKR
Trigger: CCTCTTTCCCAACCCAGGACTGGGGCTTTCTCCCCAGAGGTGAGCCTCTGTGAGCATCGAGAGGATTTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR CCA 72 bp TGGTGGGGGTGGGGGAGCCTAAATCCTAATACCCAATaGGGCCCTACAGTCCACGCTGACACTACTATGGGC +
Preference number: 3 (lower is better)
Translates to: WWGWGSLNPNTQ*GPTVHADTTMG
Trigger: GCCCATAGTAGTGTCAGCGTGGACTGTAGGGCCCCATTGGGTATTAGGATTTAGGCTCCCCCACCCCCACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR TCA 72 bp GTGGGAGACCTTTCCTACCCTGGGGAAGCTAGACGGTaGAGGCTTCCAAGCAAGGGCTCACAACATCCATCC +
Preference number: 3 (lower is better)
Translates to: VGDLSYPGEARR*RLPSKGSQHPS
Trigger: GGATGGATGTTGTGAGCCCTTGCTTGGAAGCCTTCACCGTCTAGCTTCCCCAGGGTAGGAAAGGTCTCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR CCA 72 bp GCTACCGCCACACACACTGCAGGCAGGAACCCAGTCTaGGGCCATCTTTACTGCCAGGCATTTACAGTGGAA +
Preference number: 3 (lower is better)
Translates to: ATATHTAGRNPV*GHLYCQAFTVE
Trigger: TTCCACTGTAAATGCCTGGCAGTAAAGATGGCCCCAGACTGGGTTCCTGCCTGCAGTGTGTGTGGCGGTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR CAA 90 bp ATGGGGGCAACACAGGGAAAGGATGTGATCTCCAATGCAGCACAAGGTCGGTGGAGAGCCACCCTCTGCTaGGCATGTGCAAATCCTCTC +
Preference number: 3 (lower is better)
Translates to: MGATQGKDVISNAAQGRWRATLC*ACANPL
Trigger: GAGAGGATTTGCACATGCCAAGCAGAGGGTGGCTCT...CCACCGACCTTGTGCTGCATTGGAGATCACATCCTTTCCCTGTGTTGCCCCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR TCA 72 bp AGAGGTCTTAGTGGACAAAGGCAGTGCAGCTACACATaGGGCCCAGGTCAAGACACCATGCAGAGGTCAGGC +
Preference number: 3 (lower is better)
Translates to: RGLSGQRQCSYT*GPGQDTMQRSG
Trigger: GCCTGACCTCTGCATGGTGTCTTGACCTGGGCCTCATGTGTAGCTGCACTGCCTTTGTCCACTAAGACCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR GCA 72 bp TCTCACTGCCAAGAGAGCCACCCTCTGCTTGGCATGTaGAAATCCTCTCGATGCTCACAGAGGCTCACCTCT +
Preference number: 3 (lower is better)
Translates to: SHCQESHPLLGM*KSSRCSQRLTS
Trigger: AGAGGTGAGCCTCTGTGAGCATCGAGAGGATTTGCACATGCCAAGCAGAGGGTGGCTCTCTTGGCAGTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR CCA 72 bp CCCCAAATCTCACTGCCAAGAGAGCCACCCTCTGCTTaGCATGTGCAAATCCTCTCGATGCTCACAGAGGCT +
Preference number: 3 (lower is better)
Translates to: PQISLPREPPSA*HVQILSMLTEA
Trigger: AGCCTCTGTGAGCATCGAGAGGATTTGCACATGCCAAGCAGAGGGTGGCTCTCTTGGCAGTGAGATTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR CAA 90 bp ACTTCAACTGTGAGCCAATCACGTCTGCCCCATGAGGAAGACGTAGCTCAGTGGAGAGCCACCCTCTGCTaGGCATGTGCAAATCCTCTC +
Preference number: 3 (lower is better)
Translates to: TSTVSQSRLPHEEDVAQWRATLC*ACANPL
Trigger: GAGAGGATTTGCACATGCCAAGCAGAGGGTGGCTCT...CCACTGAGCTACGTCTTCCTCATGGGGCAGACGTGATTGGCTCACAGTTGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR CAA 90 bp ACTTCAACTGTGAGCCAATCACGTCTGCCCCATGAGGAAGACGTAGCTCAGTGGCACTCCTACCCTTTCTaGCTCCAAGCCTGCAAGTCC +
Preference number: 3 (lower is better)
Translates to: TSTVSQSRLPHEEDVAQWHSYPF*LQACKS
Trigger: GGACTTGCAGGCTTGGAGCAAGAAAGGGTAGGAGTG...CCACTGAGCTACGTCTTCCTCATGGGGCAGACGTGATTGGCTCACAGTTGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR CAA 90 bp GTAAAGGCACATGGGCTACCGCCACACACACTGCAGGCAGGAACCCAGTCTGGGAGGGAGGCCCTGATTTaGGAATGTGTCTTATCCTAT +
Preference number: 3 (lower is better)
Translates to: VKAHGLPPHTLQAGTQSGREALI*ECVLSY
Trigger: ATAGGATAAGACACATTCCAAAATCAGGGCCTCCCT...CCCAGACTGGGTTCCTGCCTGCAGTGTGTGTGGCGGTAGCCCATGTGCCTTTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR CAA 90 bp GCTCTCAGCCAAATCAAGTCACATCTGCATGGTGCCACATTAAGGGAGGCGCCGTCTTATTTTCAACCATaGGGCCTCCTGCCCTCCCAC +
Preference number: 3 (lower is better)
Translates to: ALSQIKSHLHGATLREAPSYFQP*GLLPSH
Trigger: GTGGGAGGGCAGGAGGCCCAATGGTTGAAAATAAGA...CGGCGCCTCCCTTAATGTGGCACCATGCAGATGTGACTTGATTTGGCTGAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR TCA 72 bp AAGGACAGGGGCTATAATGAGCAACAGGCAGGACAATaGGCAGACAACAGCAGTGGCACAGCAGCACAGAGC +
Preference number: 3 (lower is better)
Translates to: KDRGYNEQQAGQ*ADNSSGTAAQS
Trigger: GCTCTGTGCTGCTGTGCCACTGCTGTTGTCTGCTCATTGTCCTGCCTGTTGCTCATTATAGCCCCTGTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR GCA 72 bp GGAGAGAATGCAGCCAACTCTAGCATCGAGGGCCAATaGCATCCTAGGCCCAGACCAGACTTTTGGTCCAAA +
Preference number: 3 (lower is better)
Translates to: GENAANSSIEGQ*HPRPRPDFWSK
Trigger: TTTGGACCAAAAGTCTGGTCTGGGCCTAGGATGGCATTGGCCCTCGATGCTAGAGTTGGCTGCATTCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR GCA 72 bp ACTGCAGGCAGGAACCCAGTCTGGGGCCATCTTTACTaGCAGGCATTTACAGTGGAATGGCTTTGGGATCAC +
Preference number: 3 (lower is better)
Translates to: TAGRNPVWGHLY*QAFTVEWLWDH
Trigger: GTGATCCCAAAGCCATTCCACTGTAAATGCCTGGCAGTAAAGATGGCCCCAGACTGGGTTCCTGCCTGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR CCA 72 bp AGGGTGCCATGGGGTCACGAGCAACACACCCTGCTTTaGGAGGCTGTCTTAATGTCTGTTTCCCCCAAATCT +
Preference number: 3 (lower is better)
Translates to: RVPWGHEQHTLL*EAVLMSVSPKS
Trigger: AGATTTGGGGGAAACAGACATTAAGACAGCCTCCCAAAGCAGGGTGTGTTGCTCGTGACCCCATGGCACCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR TCA 72 bp AGTCAGGAGATGAGGCCATCTCCTATGGCTCTCATCTaGGAGAATTCCTCAAGACTCAATCCCACAGGCCCC +
Preference number: 3 (lower is better)
Translates to: SQEMRPSPMALI*ENSSRLNPTGP
Trigger: GGGGCCTGTGGGATTGAGTCTTGAGGAATTCTCTCAGATGAGAGCCATAGGAGATGGCCTCATCTCCTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR TCA 72 bp TTTGACTTCAACTGTGAGCCAATCACGTCTGCCCCATaGGGAAGACGTAGCTCAGTGGTACCCTGGGTAGAC +
Preference number: 3 (lower is better)
Translates to: FDFNCEPITSAP*GRRSSVVPWVD
Trigger: GTCTACCCAGGGTACCACTGAGCTACGTCTTCCTCATGGGGCAGACGTGATTGGCTCACAGTTGAAGTCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR GCA 72 bp TTTCCCCCAAATCTCACTGCCAAGAGAGCCACCCTCTaGTTGGCATGTGCAAATCCTCTCGATGCTCACAGA +
Preference number: 3 (lower is better)
Translates to: FPPNLTAKRATL*LACANPLDAHR
Trigger: TCTGTGAGCATCGAGAGGATTTGCACATGCCAAGCAGAGGGTGGCTCTCTTGGCAGTGAGATTTGGGGGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR CCA 72 bp GAAACGCTTGCAAATCTGACATTAGGTAAAGGCACATaGGCTACCGCCACACACACTGCAGGCAGGAACCCA +
Preference number: 3 (lower is better)
Translates to: ETLANLTLGKGT*ATATHTAGRNP
Trigger: TGGGTTCCTGCCTGCAGTGTGTGTGGCGGTAGCCCATGTGCCTTTACCTAATGTCAGATTTGCAAGCGTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR CAA 90 bp GGGTTCCTGAGGGCACTGAAGCCACATCCTTTCCGATTTAACAGCCCATCAACATCTTATTTTCAACCATaGGGCCTCCTGCCCTCCCAC +
Preference number: 3 (lower is better)
Translates to: GFLRALKPHPFRFNSPSTSYFQP*GLLPSH
Trigger: GTGGGAGGGCAGGAGGCCCAATGGTTGAAAATAAGA...TGTTGATGGGCTGTTAAATCGGAAAGGATGTGGCTTCAGTGCCCTCAGGAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR CAA 90 bp GATCTCCAATGCAGCACAAGGTCGGTGGTTGATTCTGACAGAAAGCAGAGACTTCACTCCTACCCTTTCTaGCTCCAAGCCTGCAAGTCC +
Preference number: 3 (lower is better)
Translates to: DLQCSTRSVVDSDRKQRLHSYPF*LQACKS
Trigger: GGACTTGCAGGCTTGGAGCAAGAAAGGGTAGGAGTG...AAGTCTCTGCTTTCTGTCAGAATCAACCACCGACCTTGTGCTGCATTGGAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR CAA 90 bp ACTTCAACTGTGAGCCAATCACGTCTGCCCCATGAGGAAGACGTAGCTCAGTGGATTATTTATCCCCATTaGGCAGCTGGGGAGGAAGTG +
Preference number: 3 (lower is better)
Translates to: TSTVSQSRLPHEEDVAQWIIYPH*AAGEEV
Trigger: CACTTCCTCCCCAGCTGCCAAATGGGGATAAATAAT...CCACTGAGCTACGTCTTCCTCATGGGGCAGACGTGATTGGCTCACAGTTGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR TCA 72 bp TCTTCTTGGGCTCCAACTGGGTATAAGCTCTCAGTGTaGGGACCCAAACCCCTCCCCCTTATCCATCATCAT +
Preference number: 3 (lower is better)
Translates to: SSWAPTGYKLSV*GPKPLPLIHHH
Trigger: ATGATGATGGATAAGGGGGAGGGGTTTGGGTCCTCACACTGAGAGCTTATACCCAGTTGGAGCCCAAGAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR TCA 72 bp AGCCCATCAACAGCATCCCCACCTCCCTGTTCAATATaGCTGAGCTACACAGTCATACTGGCAGAACACAGG +
Preference number: 3 (lower is better)
Translates to: SPSTASPPPCSI*LSYTVILAEHR
Trigger: CCTGTGTTCTGCCAGTATGACTGTGTAGCTCAGTCATATTGAACAGGGAGGTGGGGATGCTGTTGATGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR GCA 72 bp GGTAGCTCTCAGCCAAATCAAGTCACATCTGCATGGTaGCACATTAAGGGAGGCGCCGTGTTTACAAACAGG +
Preference number: 3 (lower is better)
Translates to: GSSQPNQVTSAW*HIKGGAVFTNR
Trigger: CCTGTTTGTAAACACGGCGCCTCCCTTAATGTGGCACCATGCAGATGTGACTTGATTTGGCTGAGAGCTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR CCA 72 bp AGTCAAATCTTTTCTCCACAGTCCCGACTGGGTTCCTaGCAAGGCAGTCCTTCATTTTCAAACCCGAAGGGG +
Preference number: 3 (lower is better)
Translates to: SQIFSPQSRLGS*QGSPSFSNPKG
Trigger: CCCCTTCGGGTTTGAAAATGAAGGACTGCCTTGCCAGGAACCCAGTCGGGACTGTGGAGAAAAGATTTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR CAA 90 bp ATGGGGGCAACACAGGGAAAGGATGTGATCTCCAATGCAGCACAAGGTCGGTGGAAACTAGCCAGTTTCTaGTCACTCTGTTCCCAAAGA +
Preference number: 3 (lower is better)
Translates to: MGATQGKDVISNAAQGRWKLASF*SLCSQR
Trigger: TCTTTGGGAACAGAGTGACAAGAAACTGGCTAGTTT...CCACCGACCTTGTGCTGCATTGGAGATCACATCCTTTCCCTGTGTTGCCCCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR TCA 72 bp GGTCCTCCAGGTCTTTCTGAAGTTACTACTACAGACTaGATGAATATCAAAGCGGGCCTGACAGGCTGGGTG +
Preference number: 3 (lower is better)
Translates to: GPPGLSEVTTTD*MNIKAGLTGWV
Trigger: CACCCAGCCTGTCAGGCCCGCTTTGATATTCATTCAGTCTGTAGTAGTAACTTCAGAAAGACCTGGAGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR GCA 72 bp AATGGGGGCAACACAGGGAAAGGATGTGATCTCCAATaGAGCACAAGGTCGGTGGTTGATTCTGACAGAAAG +
Preference number: 3 (lower is better)
Translates to: NGGNTGKGCDLQ*STRSVVDSDRK
Trigger: CTTTCTGTCAGAATCAACCACCGACCTTGTGCTGCATTGGAGATCACATCCTTTCCCTGTGTTGCCCCCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR TCA 72 bp GAGAAGTCTAACTACATAGCTGGGTGGACAATACCCTaGGTTGCCTTCAAGAGTCTAAAGAACCCCTCCCCA +
Preference number: 3 (lower is better)
Translates to: EKSNYIAGWTIP*VAFKSLKNPSP
Trigger: TGGGGAGGGGTTCTTTAGACTCTTGAAGGCAACTCAGGGTATTGTCCACCCAGCTATGTAGTTAGACTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR CCA 72 bp ACCTGTTTGTTGTTCTCTCAAAGGCAGGCAAATTTTTaGAGCCTAAGGGTTCCTGAGGGCACTGAAGCCACA +
Preference number: 3 (lower is better)
Translates to: TCLLFSQRQANF*SLRVPEGTEAT
Trigger: TGTGGCTTCAGTGCCCTCAGGAACCCTTAGGCTCCAAAAATTTGCCTGCCTTTGAGAGAACAACAAACAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR CAA 90 bp CAAAAACTAGAGGTCTTAGTGGACAAAGGCAGTGCAGCTACACATGAGGCCCAGGGCCTTTCAAAAGCTTaGCCTAAGTCCCAACATCTA +
Preference number: 3 (lower is better)
Translates to: QKLEVLVDKGSAATHEAQGLSKA*PKSQHL
Trigger: TAGATGTTGGGACTTAGGCAAAGCTTTTGAAAGGCC...CTGGGCCTCATGTGTAGCTGCACTGCCTTTGTCCACTAAGACCTCTAGTTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR CAA 90 bp ACCATAAAGGAGAGAGAAAAGACCTGTTTGTTGTTCTCTCAAAGGCAGGCAAATCTGAGAGGCAATGGATaGCAGTGGGAGGAAGCCGAG +
Preference number: 3 (lower is better)
Translates to: TIKEREKTCLLFSQRQANLRGNG*QWEEAE
Trigger: CTCGGCTTCCTCCCACTGCAATCCATTGCCTCTCAG...ATTTGCCTGCCTTTGAGAGAACAACAAACAGGTCTTTTCTCTCTCCTTTATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR CAA 90 bp GATCTCCAATGCAGCACAAGGTCGGTGGTTGATTCTGACAGAAAGCAGAGACTTATTATTTATCCCCATTaGGCAGCTGGGGAGGAAGTG +
Preference number: 3 (lower is better)
Translates to: DLQCSTRSVVDSDRKQRLIIYPH*AAGEEV
Trigger: CACTTCCTCCCCAGCTGCCAAATGGGGATAAATAAT...AAGTCTCTGCTTTCTGTCAGAATCAACCACCGACCTTGTGCTGCATTGGAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR CAA 90 bp GGGTTCCTGAGGGCACTGAAGCCACATCCTTTCCGATTTAACAGCCCATCAACAAAACTAGCCAGTTTCTaGTCACTCTGTTCCCAAAGA +
Preference number: 3 (lower is better)
Translates to: GFLRALKPHPFRFNSPSTKLASF*SLCSQR
Trigger: TCTTTGGGAACAGAGTGACAAGAAACTGGCTAGTTT...TGTTGATGGGCTGTTAAATCGGAAAGGATGTGGCTTCAGTGCCCTCAGGAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR CCA 72 bp GGAAAGGATGTGATCTCCAATGCAGCACAAGGTCGGTaGTTGATTCTGACAGAAAGCAGAGACTTCAGTACT +
Preference number: 3 (lower is better)
Translates to: GKDVISNAAQGR*LILTESRDFST
Trigger: AGTACTGAAGTCTCTGCTTTCTGTCAGAATCAACCACCGACCTTGTGCTGCATTGGAGATCACATCCTTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR CCA 72 bp CTTTCTCAACCCCAGAACCAAGCTAGACAAAAGCACTaGGATGCTGACTCAAGCCCTAACTCAGTTTCTCTT +
Preference number: 3 (lower is better)
Translates to: LSQPQNQARQKH*DADSSPNSVSL
Trigger: AAGAGAAACTGAGTTAGGGCTTGAGTCAGCATCCCAGTGCTTTTGTCTAGCTTGGTTCTGGGGTTGAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR CCA 72 bp CTATGGCCTAAGCTCCCATGGCCAATTGGATCAATCTaGTTATCTTTACCCCAATGGCTTGAGTCTTTCCCA +
Preference number: 3 (lower is better)
Translates to: LWPKLPWPIGSI*LSLPQWLESFP
Trigger: TGGGAAAGACTCAAGCCATTGGGGTAAAGATAACCAGATTGATCCAATTGGCCATGGGAGCTTAGGCCATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR CCA 72 bp TCCTGCTCACTTCCAAGACTATGGCCTAAGCTCCCATaGCCAATTGGATCAATCTGGTTATCTTTACCCCAA +
Preference number: 3 (lower is better)
Translates to: SCSLPRLWPKLP*PIGSIWLSLPQ
Trigger: TTGGGGTAAAGATAACCAGATTGATCCAATTGGCCATGGGAGCTTAGGCCATAGTCTTGGAAGTGAGCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR CCA 72 bp AAAACATGGTCTTTGTCCTGCTCACTTCCAAGACTATaGCCTAAGCTCCCATGGCCAATTGGATCAATCTGG +
Preference number: 3 (lower is better)
Translates to: KTWSLSCSLPRL*PKLPWPIGSIW
Trigger: CCAGATTGATCCAATTGGCCATGGGAGCTTAGGCCATAGTCTTGGAAGTGAGCAGGACAAAGACCATGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR GCA 72 bp GGAAGTTATCACATCTCTAAAACATGGTCTTTGTCCTaGTCACTTCCAAGACTATGGCCTAAGCTCCCATGG +
Preference number: 3 (lower is better)
Translates to: GSYHISKTWSLS*SLPRLWPKLPW
Trigger: CCATGGGAGCTTAGGCCATAGTCTTGGAAGTGAGCAGGACAAAGACCATGTTTTAGAGATGTGATAACTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR TCA 72 bp TGTAGGTGCCTAGGGGAAAGGTCCTCCAGGTCTTTCTaGAGTTACTACTACAGACTGAATGAATATCAAAGC +
Preference number: 3 (lower is better)
Translates to: CRCLGERSSRSF*SYYYRLNEYQS
Trigger: GCTTTGATATTCATTCAGTCTGTAGTAGTAACTTCAGAAAGACCTGGAGGACCTTTCCCCTAGGCACCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR TCA 72 bp AGATTATTTATCCCCATTTGGCAGCTGGGGAGGAAGTaGAAGAGATATCACAAGACTCACCTTAAGCTTTGC +
Preference number: 3 (lower is better)
Translates to: RLFIPIWQLGRK*KRYHKTHLKLC
Trigger: GCAAAGCTTAAGGTGAGTCTTGTGATATCTCTTTCACTTCCTCCCCAGCTGCCAAATGGGGATAAATAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR CAA 90 bp ACCATAAAGGAGAGAGAAAAGACCTGTTTGTTGTTCTCTCAAAGGCAGGCAAATGGCCTTTCAAAAGCTTaGCCTAAGTCCCAACATCTA +
Preference number: 3 (lower is better)
Translates to: TIKEREKTCLLFSQRQANGLSKA*PKSQHL
Trigger: TAGATGTTGGGACTTAGGCAAAGCTTTTGAAAGGCC...ATTTGCCTGCCTTTGAGAGAACAACAAACAGGTCTTTTCTCTCTCCTTTATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR CAA 90 bp AACTCTTCAATGTTCCTGCTCAGTGCAGGGTTAAATTATGCTACCATTCTGTTCCAACTTGAGGAGCTATaGCAGCCAAACTTCACTTTC +
Preference number: 3 (lower is better)
Translates to: NSSMFLLSAGLNYATILFQLEEL*QPNFTF
Trigger: GAAAGTGAAGTTTGGCTGCAATAGCTCCTCAAGTTG...GAACAGAATGGTAGCATAATTTAACCCTGCACTGAGCAGGAACATTGAAGAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR-3UTR CAA 90 bp AGACTGTTGAGTTTGCAATCTACTAGGGAAAGATCTAGGCTTAACAGGAGAACAAGAGAAAAGACCTGTTaGTTGTTCTCTCAAAGGCAG +
Preference number: 3 (lower is better)
Translates to: RLLSLQSTRERSRLNRRTREKTC*LFSQRQ
Trigger: CTGCCTTTGAGAGAACAACAAACAGGTCTTTTCTCT...TGTTCTCCTGTTAAGCCTAGATCTTTCCCTAGTAGATTGCAAACTCAACAGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR GCA 90 bp GTAAAGGCACATGGGCTACCGCCACACACACTGCAGGCAGGAACCCAGTCTGGGCTTGGCTTTCACCCTTaGTGCTGGCGGAGTCAAGGG +
Preference number: 4 (lower is better)
Translates to: VKAHGLPPHTLQAGTQSGLGFHP*CWRSQG
Trigger: CCCTTGACTCCGCCAGCAGCAAGGGTGAAAGCCAAG...CCCAGACTGGGTTCCTGCCTGCAGTGTGTGTGGCGGTAGCCCATGTGCCTTTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp ATGGGGGCAACACAGGGAAAGGATGTGATCTCCAATGCAGCACAAGGTCGGTGGTGTACCCAGCTGCCCTaGGGGAGCACAGCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: MGATQGKDVISNAAQGRWCTQLP*GSTAGL
Trigger: CAGGCCAGCTGTGCTCCCCCAGGGCAGCTGGGTACA...CCACCGACCTTGTGCTGCATTGGAGATCACATCCTTTCCCTGTGTTGCCCCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR TCA 90 bp GTAAAGGCACATGGGCTACCGCCACACACACTGCAGGCAGGAACCCAGTCTGGGCCTCCCCTTGCATGCTaGATCTTTGGAAGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: VKAHGLPPHTLQAGTQSGPPLAC*IFGSLG
Trigger: CCCCAAGCTTCCAAAGATTCAGCATGCAAGGGGAGG...CCCAGACTGGGTTCCTGCCTGCAGTGTGTGTGGCGGTAGCCCATGTGCCTTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp CCCTCTGCTTGGCATGTGCAAATCCTCTCGATGCTCACAGAGGCTCACCTCTGGCGTTGGCTCCTTGTCTaGGAAGGTGGCTCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: PSAWHVQILSMLTEAHLWRWLLV*EGGSGL
Trigger: CAGGCCAGAGCCACCTTCCCAGACAAGGAGCCAACG...CCAGAGGTGAGCCTCTGTGAGCATCGAGAGGATTTGCACATGCCAAGCAGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp GTAAAGGCACATGGGCTACCGCCACACACACTGCAGGCAGGAACCCAGTCTGGGGCGCCTTTCATGAAATaGGAGGGCAGGTGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: VKAHGLPPHTLQAGTQSGAPFMK*EGRWEE
Trigger: CTCTTCCCACCTGCCCTCCCATTTCATGAAAGGCGC...CCCAGACTGGGTTCCTGCCTGCAGTGTGTGTGGCGGTAGCCCATGTGCCTTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp GGGTTCCTGAGGGCACTGAAGCCACATCCTTTCCGATTTAACAGCCCATCAACAGCACCAGGCTCAGGCTaGGAGGGTTCTCCCACCCGG +
Preference number: 4 (lower is better)
Translates to: GFLRALKPHPFRFNSPSTAPGSG*EGSPTR
Trigger: CCGGGTGGGAGAACCCTCCCAGCCTGAGCCTGGTGC...TGTTGATGGGCTGTTAAATCGGAAAGGATGTGGCTTCAGTGCCCTCAGGAACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR TCA 90 bp TTCCCCCAAATCTCACTGCCAAGAGAGCCACCCTCTGCTTGGCATGTGCAAATCCCGGGAACCCTCTCCTaGAGGCTGGTTCTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: FPQISLPREPPSAWHVQIPGTLS*RLVLPL
Trigger: GAGGGGAAGAACCAGCCTTCAGGAGAGGGTTCCCGG...GATTTGCACATGCCAAGCAGAGGGTGGCTCTCTTGGCAGTGAGATTTGGGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR GCA 90 bp CCCTCTGCTTGGCATGTGCAAATCCTCTCGATGCTCACAGAGGCTCACCTCTGGGGCTTTCACCCTTGCTaGTGGCGGAGTCAAGGGCTT +
Preference number: 4 (lower is better)
Translates to: PSAWHVQILSMLTEAHLWGFHPC*WRSQGL
Trigger: AAGCCCTTGACTCCGCCAGCAGCAAGGGTGAAAGCC...CCAGAGGTGAGCCTCTGTGAGCATCGAGAGGATTTGCACATGCCAAGCAGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR GCA 90 bp CCCTCTGCTTGGCATGTGCAAATCCTCTCGATGCTCACAGAGGCTCACCTCTGGACTGTCCATCCGCCATaGATTCCACCACCGGCACCA +
Preference number: 4 (lower is better)
Translates to: PSAWHVQILSMLTEAHLWTVHPP*IPPPAP
Trigger: TGGTGCCGGTGGTGGAATGCATGGCGGATGGACAGT...CCAGAGGTGAGCCTCTGTGAGCATCGAGAGGATTTGCACATGCCAAGCAGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp CCCTCTGCTTGGCATGTGCAAATCCTCTCGATGCTCACAGAGGCTCACCTCTGGAACGGGAGGTGGCGTTaGCTCCTTGTCTGGGAAGGT +
Preference number: 4 (lower is better)
Translates to: PSAWHVQILSMLTEAHLWNGRWR*LLVWEG
Trigger: ACCTTCCCAGACAAGGAGCCAACGCCACCTCCCGTT...CCAGAGGTGAGCCTCTGTGAGCATCGAGAGGATTTGCACATGCCAAGCAGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR TCA 90 bp CCCTCTGCTTGGCATGTGCAAATCCTCTCGATGCTCACAGAGGCTCACCTCTGGTCCCCTGTAGCCAGCTaGATGATGGCGCCTTTCATG +
Preference number: 4 (lower is better)
Translates to: PSAWHVQILSMLTEAHLWSPVAS*MMAPFM
Trigger: CATGAAAGGCGCCATCATTCAGCTGGCTACAGGGGA...CCAGAGGTGAGCCTCTGTGAGCATCGAGAGGATTTGCACATGCCAAGCAGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR GCA 90 bp GTAAAGGCACATGGGCTACCGCCACACACACTGCAGGCAGGAACCCAGTCTGGGATCTTTCCTCTGAGCTaGCACCACACGATAGTCCTG +
Preference number: 4 (lower is better)
Translates to: VKAHGLPPHTLQAGTQSGIFPLS*HHTIVL
Trigger: CAGGACTATCGTGTGGTGGCAGCTCAGAGGAAAGAT...CCCAGACTGGGTTCCTGCCTGCAGTGTGTGTGGCGGTAGCCCATGTGCCTTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR GCA 90 bp ATGGGGGCAACACAGGGAAAGGATGTGATCTCCAATGCAGCACAAGGTCGGTGGAAGGTGGCTCTGGCCTaGAGGTCCAGACTTGATGCC +
Preference number: 4 (lower is better)
Translates to: MGATQGKDVISNAAQGRWKVALA*RSRLDA
Trigger: GGCATCAAGTCTGGACCTGCAGGCCAGAGCCACCTT...CCACCGACCTTGTGCTGCATTGGAGATCACATCCTTTCCCTGTGTTGCCCCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp CCCTCTGCTTGGCATGTGCAAATCCTCTCGATGCTCACAGAGGCTCACCTCTGGTTTCACCCTTGCTGCTaGCGGAGTCAAGGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: PSAWHVQILSMLTEAHLWFHPCC*RSQGLH
Trigger: GTGAAGCCCTTGACTCCGCCAGCAGCAAGGGTGAAA...CCAGAGGTGAGCCTCTGTGAGCATCGAGAGGATTTGCACATGCCAAGCAGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp ACTTCAACTGTGAGCCAATCACGTCTGCCCCATGAGGAAGACGTAGCTCAGTGGCGTTGGCTCCTTGTCTaGGAAGGTGGCTCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: TSTVSQSRLPHEEDVAQWRWLLV*EGGSGL
Trigger: CAGGCCAGAGCCACCTTCCCAGACAAGGAGCCAACG...CCACTGAGCTACGTCTTCCTCATGGGGCAGACGTGATTGGCTCACAGTTGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp ATGGGGGCAACACAGGGAAAGGATGTGATCTCCAATGCAGCACAAGGTCGGTGGAACGGGAGGTGGCGTTaGCTCCTTGTCTGGGAAGGT +
Preference number: 4 (lower is better)
Translates to: MGATQGKDVISNAAQGRWNGRWR*LLVWEG
Trigger: ACCTTCCCAGACAAGGAGCCAACGCCACCTCCCGTT...CCACCGACCTTGTGCTGCATTGGAGATCACATCCTTTCCCTGTGTTGCCCCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp ATGGGGGCAACACAGGGAAAGGATGTGATCTCCAATGCAGCACAAGGTCGGTGGAGAGGTAACGGGAGGTaGCGTTGGCTCCTTGTCTGG +
Preference number: 4 (lower is better)
Translates to: MGATQGKDVISNAAQGRWRGNGR*RWLLVW
Trigger: CCAGACAAGGAGCCAACGCCACCTCCCGTTACCTCT...CCACCGACCTTGTGCTGCATTGGAGATCACATCCTTTCCCTGTGTTGCCCCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp GCACTGAAGCCACATCCTTTCCGATTTAACAGCCCATCAACAGCATCCCCACCTTTGGAAGCTTGGGGCTaGCCAGCAGGCCTGAGCACC +
Preference number: 4 (lower is better)
Translates to: ALKPHPFRFNSPSTASPPLEAWG*PAGLST
Trigger: GGTGCTCAGGCCTGCTGGCCAGCCCCAAGCTTCCAA...AGGTGGGGATGCTGTTGATGGGCTGTTAAATCGGAAAGGATGTGGCTTCAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR TCA 90 bp GCTCTCAGCCAAATCAAGTCACATCTGCATGGTGCCACATTAAGGGAGGCGCCGCTACTGTCAGGCCAGTaGTGGCCTCAGTTCCATCAC +
Preference number: 4 (lower is better)
Translates to: ALSQIKSHLHGATLREAPLLSGQ*WPQFHH
Trigger: GTGATGGAACTGAGGCCATCACTGGCCTGACAGTAG...CGGCGCCTCCCTTAATGTGGCACCATGCAGATGTGACTTGATTTGGCTGAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR TCA 90 bp GCACTGAAGCCACATCCTTTCCGATTTAACAGCCCATCAACAGCATCCCCACCTGCAGACTGGCCCTCCTaGGGAGTAAGAATGGGGCTG +
Preference number: 4 (lower is better)
Translates to: ALKPHPFRFNSPSTASPPADWPS*GVRMGL
Trigger: CAGCCCCATTCTTACTCCTCAGGAGGGCCAGTCTGC...AGGTGGGGATGCTGTTGATGGGCTGTTAAATCGGAAAGGATGTGGCTTCAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR TCA 90 bp TTCCCCCAAATCTCACTGCCAAGAGAGCCACCCTCTGCTTGGCATGTGCAAATCGGCCACTGGCTCTCCTaGATGTCCACGACTGTGCTA +
Preference number: 4 (lower is better)
Translates to: FPQISLPREPPSAWHVQIGHWLS*MSTTVL
Trigger: TAGCACAGTCGTGGACATTCAGGAGAGCCAGTGGCC...GATTTGCACATGCCAAGCAGAGGGTGGCTCTCTTGGCAGTGAGATTTGGGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR TCA 90 bp CTGGCAGAACACAGGTTAAAAATGGACAGGATGCCTGAGAGTCTACATGGCCAGCCGGGAACCCTCTCCTaGAGGCTGGTTCTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: LAEHRLKMDRMPESLHGQPGTLS*RLVLPL
Trigger: GAGGGGAAGAACCAGCCTTCAGGAGAGGGTTCCCGG...CTGGCCATGTAGACTCTCAGGCATCCTGTCCATTTTTAACCTGTGTTCTGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR TCA 90 bp CCCTCTGCTTGGCATGTGCAAATCCTCTCGATGCTCACAGAGGCTCACCTCTGGTTACCTCCTGTGGAATaGAAGAGGGACGGAGCATCG +
Preference number: 4 (lower is better)
Translates to: PSAWHVQILSMLTEAHLWLPPVE*KRDGAS
Trigger: CGATGCTCCGTCCCTCTTTCATTCCACAGGAGGTAA...CCAGAGGTGAGCCTCTGTGAGCATCGAGAGGATTTGCACATGCCAAGCAGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR GCA 90 bp CACAGCAGCACAGAGCAAACAAAGCCCATAGTGTTAAGACCAAATGGAACCCTACAGTCCGCCCAGGGCTaGAGGAGGACCAACCCTGGC +
Preference number: 4 (lower is better)
Translates to: HSSTEQTKPIVLRPNGTLQSAQG*RRTNPG
Trigger: GCCAGGGTTGGTCCTCCTGCAGCCCTGGGCGGACTG...TAGGGTTCCATTTGGTCTTAACACTATGGGCTTTGTTTGCTCTGTGCTGCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp ATGGGGGCAACACAGGGAAAGGATGTGATCTCCAATGCAGCACAAGGTCGGTGGTCCCCATATCCTCGCTaGTCACAGGGAGGTCTCGTT +
Preference number: 4 (lower is better)
Translates to: MGATQGKDVISNAAQGRWSPYPR*SQGGLV
Trigger: AACGAGACCTCCCTGTGACCAGCGAGGATATGGGGA...CCACCGACCTTGTGCTGCATTGGAGATCACATCCTTTCCCTGTGTTGCCCCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp GCTCTCAGCCAAATCAAGTCACATCTGCATGGTGCCACATTAAGGGAGGCGCCGGTGGAAGGTGAGTGGTaGCAAGGTTGGCAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: ALSQIKSHLHGATLREAPVEGEW*QGWQKE
Trigger: CTCCTTCTGCCAACCTTGCCACCACTCACCTTCCAC...CGGCGCCTCCCTTAATGTGGCACCATGCAGATGTGACTTGATTTGGCTGAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp ACTTCAACTGTGAGCCAATCACGTCTGCCCCATGAGGAAGACGTAGCTCAGTGGAGAGGTAACGGGAGGTaGCGTTGGCTCCTTGTCTGG +
Preference number: 4 (lower is better)
Translates to: TSTVSQSRLPHEEDVAQWRGNGR*RWLLVW
Trigger: CCAGACAAGGAGCCAACGCCACCTCCCGTTACCTCT...CCACTGAGCTACGTCTTCCTCATGGGGCAGACGTGATTGGCTCACAGTTGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp CCCTCTGCTTGGCATGTGCAAATCCTCTCGATGCTCACAGAGGCTCACCTCTGGCTTCGCACAAAATCCTaGGTCTGGAGGTCCTCTACC +
Preference number: 4 (lower is better)
Translates to: PSAWHVQILSMLTEAHLWLRTKS*VWRSST
Trigger: GGTAGAGGACCTCCAGACCCAGGATTTTGTGCGAAG...CCAGAGGTGAGCCTCTGTGAGCATCGAGAGGATTTGCACATGCCAAGCAGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp TTCCCCCAAATCTCACTGCCAAGAGAGCCACCCTCTGCTTGGCATGTGCAAATCCCCACCTGTAGCCGATaGCAGGGCAGAGAGAAGAGT +
Preference number: 4 (lower is better)
Translates to: FPQISLPREPPSAWHVQIPTCSR*QGREKS
Trigger: ACTCTTCTCTCTGCCCTGCCATCGGCTACAGGTGGG...GATTTGCACATGCCAAGCAGAGGGTGGCTCTCTTGGCAGTGAGATTTGGGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp CAAAAACTAGAGGTCTTAGTGGACAAAGGCAGTGCAGCTACACATGAGGCCCAGTTGGAAGCTTGGGGCTaGCCAGCAGGCCTGAGCACC +
Preference number: 4 (lower is better)
Translates to: QKLEVLVDKGSAATHEAQLEAWG*PAGLST
Trigger: GGTGCTCAGGCCTGCTGGCCAGCCCCAAGCTTCCAA...CTGGGCCTCATGTGTAGCTGCACTGCCTTTGTCCACTAAGACCTCTAGTTTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp CCCTCTGCTTGGCATGTGCAAATCCTCTCGATGCTCACAGAGGCTCACCTCTGGTGCATGCTGAATCTTTaGAAGCTTGGGGCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: PSAWHVQILSMLTEAHLWCMLNL*KLGAGQ
Trigger: CTGGCCAGCCCCAAGCTTCCAAAGATTCAGCATGCA...CCAGAGGTGAGCCTCTGTGAGCATCGAGAGGATTTGCACATGCCAAGCAGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR CAA 72 bp GAGGGTGCCATGGGGTCACGAGCAACACACCCTGCTTaGGGAGGCTGTCTTAATGTCTGTTTCCCCCAAATC +
Preference number: 4 (lower is better)
Translates to: EGAMGSRATHPA*GGCLNVCFPQI
Trigger: GATTTGGGGGAAACAGACATTAAGACAGCCTCCCAAAGCAGGGTGTGTTGCTCGTGACCCCATGGCACCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR TCA 90 bp ATGGGGGCAACACAGGGAAAGGATGTGATCTCCAATGCAGCACAAGGTCGGTGGACAAAGTGTGGAAGGTaGGTGGTGGCAAGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: MGATQGKDVISNAAQGRWTKCGR*VVARLA
Trigger: TGCCAACCTTGCCACCACTCACCTTCCACACTTTGT...CCACCGACCTTGTGCTGCATTGGAGATCACATCCTTTCCCTGTGTTGCCCCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR TCA 90 bp GCTCTCAGCCAAATCAAGTCACATCTGCATGGTGCCACATTAAGGGAGGCGCCGGACTTGTTAAATGACTaGGCTGGGGATGCGGCCTGT +
Preference number: 4 (lower is better)
Translates to: ALSQIKSHLHGATLREAPDLLND*AGDAAC
Trigger: ACAGGCCGCATCCCCAGCTCAGTCATTTAACAAGTC...CGGCGCCTCCCTTAATGTGGCACCATGCAGATGTGACTTGATTTGGCTGAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR TCA 90 bp TTCCCCCAAATCTCACTGCCAAGAGAGCCACCCTCTGCTTGGCATGTGCAAATCCCTCCCCTTGCATGCTaGATCTTTGGAAGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: FPQISLPREPPSAWHVQIPPLAC*IFGSLG
Trigger: CCCCAAGCTTCCAAAGATTCAGCATGCAAGGGGAGG...GATTTGCACATGCCAAGCAGAGGGTGGCTCTCTTGGCAGTGAGATTTGGGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR GCA 90 bp GTAAAGGCACATGGGCTACCGCCACACACACTGCAGGCAGGAACCCAGTCTGGGCCACCTTGTACAGCATaGCATACTGATCTACTGTCA +
Preference number: 4 (lower is better)
Translates to: VKAHGLPPHTLQAGTQSGPPCTA*HTDLLS
Trigger: TGACAGTAGATCAGTATGGCATGCTGTACAAGGTGG...CCCAGACTGGGTTCCTGCCTGCAGTGTGTGTGGCGGTAGCCCATGTGCCTTTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR GCA 90 bp GCTCTCAGCCAAATCAAGTCACATCTGCATGGTGCCACATTAAGGGAGGCGCCGGGAGACCCAATAAACTaGAGTGAGGTGGATGGGAGC +
Preference number: 4 (lower is better)
Translates to: ALSQIKSHLHGATLREAPGDPIN*SEVDGS
Trigger: GCTCCCATCCACCTCACTGCAGTTTATTGGGTCTCC...CGGCGCCTCCCTTAATGTGGCACCATGCAGATGTGACTTGATTTGGCTGAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR GCA 90 bp ATGGGGGCAACACAGGGAAAGGATGTGATCTCCAATGCAGCACAAGGTCGGTGGGGGAGTAGCTTCTTCTaGGAGGAGAGAGGCATATGG +
Preference number: 4 (lower is better)
Translates to: MGATQGKDVISNAAQGRWGSSFF*EERGIW
Trigger: CCATATGCCTCTCTCCTCGCAGAAGAAGCTACTCCC...CCACCGACCTTGTGCTGCATTGGAGATCACATCCTTTCCCTGTGTTGCCCCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR GCA 90 bp GCACTGAAGCCACATCCTTTCCGATTTAACAGCCCATCAACAGCATCCCCACCTCTTGGCTTTCACCCTTaGTGCTGGCGGAGTCAAGGG +
Preference number: 4 (lower is better)
Translates to: ALKPHPFRFNSPSTASPPLGFHP*CWRSQG
Trigger: CCCTTGACTCCGCCAGCAGCAAGGGTGAAAGCCAAG...AGGTGGGGATGCTGTTGATGGGCTGTTAAATCGGAAAGGATGTGGCTTCAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR GCA 90 bp CCCTCTGCTTGGCATGTGCAAATCCTCTCGATGCTCACAGAGGCTCACCTCTGGATCTTTCCTCTGAGCTaGCACCACACGATAGTCCTG +
Preference number: 4 (lower is better)
Translates to: PSAWHVQILSMLTEAHLWIFPLS*HHTIVL
Trigger: CAGGACTATCGTGTGGTGGCAGCTCAGAGGAAAGAT...CCAGAGGTGAGCCTCTGTGAGCATCGAGAGGATTTGCACATGCCAAGCAGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR GCA 90 bp ATGGGGGCAACACAGGGAAAGGATGTGATCTCCAATGCAGCACAAGGTCGGTGGCAGTGGGCACCAGGTTaGCATTGGCTACAACCATTG +
Preference number: 4 (lower is better)
Translates to: MGATQGKDVISNAAQGRWQWAPG*HWLQPL
Trigger: CAATGGTTGTAGCCAATGGCAACCTGGTGCCCACTG...CCACCGACCTTGTGCTGCATTGGAGATCACATCCTTTCCCTGTGTTGCCCCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR GCA 90 bp AAAAGTGCATTTATTACTATTATTCCTGCCGAGAAGGCTCAGCAGGGCAAGCCACAGTCCGCCCAGGGCTaGAGGAGGACCAACCCTGGC +
Preference number: 4 (lower is better)
Translates to: KSAFITIIPAEKAQQGKPQSAQG*RRTNPG
Trigger: GCCAGGGTTGGTCCTCCTGCAGCCCTGGGCGGACTG...TGGCTTGCCCTGCTGAGCCTTCTCGGCAGGAATAATAGTAATAAATGCACTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp ACTTCAACTGTGAGCCAATCACGTCTGCCCCATGAGGAAGACGTAGCTCAGTGGTCCCCATATCCTCGCTaGTCACAGGGAGGTCTCGTT +
Preference number: 4 (lower is better)
Translates to: TSTVSQSRLPHEEDVAQWSPYPR*SQGGLV
Trigger: AACGAGACCTCCCTGTGACCAGCGAGGATATGGGGA...CCACTGAGCTACGTCTTCCTCATGGGGCAGACGTGATTGGCTCACAGTTGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp GCACTGAAGCCACATCCTTTCCGATTTAACAGCCCATCAACAGCATCCCCACCTACCGGCACCAGTCCTTaGCTTTCACCCTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: ALKPHPFRFNSPSTASPPTGTSP*LSPLLL
Trigger: CAGCAGCAAGGGTGAAAGCCAAGGACTGGTGCCGGT...AGGTGGGGATGCTGTTGATGGGCTGTTAAATCGGAAAGGATGTGGCTTCAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp CCCTCTGCTTGGCATGTGCAAATCCTCTCGATGCTCACAGAGGCTCACCTCTGGAGGTCTGTGTTTTACTaGTTCCTGATGGGACTGCGG +
Preference number: 4 (lower is better)
Translates to: PSAWHVQILSMLTEAHLWRSVFY*FLMGLR
Trigger: CCGCAGTCCCATCAGGAACCAGTAAAACACAGACCT...CCAGAGGTGAGCCTCTGTGAGCATCGAGAGGATTTGCACATGCCAAGCAGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp GCTCTCAGCCAAATCAAGTCACATCTGCATGGTGCCACATTAAGGGAGGCGCCGTGGAACGCCCTTCGATaGACAGCTTTACCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: ALSQIKSHLHGATLREAPWNALR*TALPPV
Trigger: CACAGGAGGTAAAGCTGTCCATCGAAGGGCGTTCCA...CGGCGCCTCCCTTAATGTGGCACCATGCAGATGTGACTTGATTTGGCTGAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR TCA 90 bp TTCCCCCAAATCTCACTGCCAAGAGAGCCACCCTCTGCTTGGCATGTGCAAATCACAAAGTGTGGAAGGTaGGTGGTGGCAAGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: FPQISLPREPPSAWHVQITKCGR*VVARLA
Trigger: TGCCAACCTTGCCACCACTCACCTTCCACACTTTGT...GATTTGCACATGCCAAGCAGAGGGTGGCTCTCTTGGCAGTGAGATTTGGGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR TCA 90 bp CAAAAACTAGAGGTCTTAGTGGACAAAGGCAGTGCAGCTACACATGAGGCCCAGGGCCACTGGCTCTCCTaGATGTCCACGACTGTGCTA +
Preference number: 4 (lower is better)
Translates to: QKLEVLVDKGSAATHEAQGHWLS*MSTTVL
Trigger: TAGCACAGTCGTGGACATTCAGGAGAGCCAGTGGCC...CTGGGCCTCATGTGTAGCTGCACTGCCTTTGTCCACTAAGACCTCTAGTTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR TCA 90 bp ATGGGGGCAACACAGGGAAAGGATGTGATCTCCAATGCAGCACAAGGTCGGTGGGCTGGCCTGAGATACTaGGTTACTGTTCAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: MGATQGKDVISNAAQGRWAGLRY*VTVQAL
Trigger: CAGAGCTTGAACAGTAACTCAGTATCTCAGGCCAGC...CCACCGACCTTGTGCTGCATTGGAGATCACATCCTTTCCCTGTGTTGCCCCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR TCA 90 bp ACTTCAACTGTGAGCCAATCACGTCTGCCCCATGAGGAAGACGTAGCTCAGTGGTTACCTCCTGTGGAATaGAAGAGGGACGGAGCATCG +
Preference number: 4 (lower is better)
Translates to: TSTVSQSRLPHEEDVAQWLPPVE*KRDGAS
Trigger: CGATGCTCCGTCCCTCTTTCATTCCACAGGAGGTAA...CCACTGAGCTACGTCTTCCTCATGGGGCAGACGTGATTGGCTCACAGTTGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR GCA 90 bp ACTTCAACTGTGAGCCAATCACGTCTGCCCCATGAGGAAGACGTAGCTCAGTGGCAGGGGGCACCTCAATaGTCACTTTGCTCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: TSTVSQSRLPHEEDVAQWQGAPQ*SLCSAV
Trigger: AACAGCAGAGCAAAGTGAGCATTGAGGTGCCCCCTG...CCACTGAGCTACGTCTTCCTCATGGGGCAGACGTGATTGGCTCACAGTTGAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp GTAAAGGCACATGGGCTACCGCCACACACACTGCAGGCAGGAACCCAGTCTGGGACATTTGATAATAAATaGGCATCCGGCCTGGAGCAA +
Preference number: 4 (lower is better)
Translates to: VKAHGLPPHTLQAGTQSGTFDNK*ASGLEQ
Trigger: TTGCTCCAGGCCGGATGCCCATTTATTATCAAATGT...CCCAGACTGGGTTCCTGCCTGCAGTGTGTGTGGCGGTAGCCCATGTGCCTTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp GCACTGAAGCCACATCCTTTCCGATTTAACAGCCCATCAACAGCATCCCCACCTTTTCACCCTTGCTGCTaGCGGAGTCAAGGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: ALKPHPFRFNSPSTASPPFHPCC*RSQGLH
Trigger: GTGAAGCCCTTGACTCCGCCAGCAGCAAGGGTGAAA...AGGTGGGGATGCTGTTGATGGGCTGTTAAATCGGAAAGGATGTGGCTTCAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp GGGTTCCTGAGGGCACTGAAGCCACATCCTTTCCGATTTAACAGCCCATCAACACTGGGGGAGCACAGCTaGCCTGAGATACTGAGTTAC +
Preference number: 4 (lower is better)
Translates to: GFLRALKPHPFRFNSPSTLGEHS*PEILSY
Trigger: GTAACTCAGTATCTCAGGCCAGCTGTGCTCCCCCAG...TGTTGATGGGCTGTTAAATCGGAAAGGATGTGGCTTCAGTGCCCTCAGGAACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp AAAAGTGCATTTATTACTATTATTCCTGCCGAGAAGGCTCAGCAGGGCAAGCCATGTACCCAGCTGCCCTaGGGGAGCACAGCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: KSAFITIIPAEKAQQGKPCTQLP*GSTAGL
Trigger: CAGGCCAGCTGTGCTCCCCCAGGGCAGCTGGGTACA...TGGCTTGCCCTGCTGAGCCTTCTCGGCAGGAATAATAGTAATAAATGCACTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR GCA 90 bp GATCTCCAATGCAGCACAAGGTCGGTGGTTGATTCTGACAGAAAGCAGAGACTTACTGTCCATCCGCCATaGATTCCACCACCGGCACCA +
Preference number: 4 (lower is better)
Translates to: DLQCSTRSVVDSDRKQRLTVHPP*IPPPAP
Trigger: TGGTGCCGGTGGTGGAATGCATGGCGGATGGACAGT...AAGTCTCTGCTTTCTGTCAGAATCAACCACCGACCTTGTGCTGCATTGGAGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR GCA 90 bp GGGTTCCTGAGGGCACTGAAGCCACATCCTTTCCGATTTAACAGCCCATCAACACAGTGGGCACCAGGTTaGCATTGGCTACAACCATTG +
Preference number: 4 (lower is better)
Translates to: GFLRALKPHPFRFNSPSTQWAPG*HWLQPL
Trigger: CAATGGTTGTAGCCAATGGCAACCTGGTGCCCACTG...TGTTGATGGGCTGTTAAATCGGAAAGGATGTGGCTTCAGTGCCCTCAGGAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR GCA 90 bp GGGTTCCTGAGGGCACTGAAGCCACATCCTTTCCGATTTAACAGCCCATCAACACAGGGGGCACCTCAATaGTCACTTTGCTCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: GFLRALKPHPFRFNSPSTQGAPQ*SLCSAV
Trigger: AACAGCAGAGCAAAGTGAGCATTGAGGTGCCCCCTG...TGTTGATGGGCTGTTAAATCGGAAAGGATGTGGCTTCAGTGCCCTCAGGAACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp GGGTTCCTGAGGGCACTGAAGCCACATCCTTTCCGATTTAACAGCCCATCAACAAGTGTGGAAGGTGAGTaGTGGCAAGGTTGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: GFLRALKPHPFRFNSPSTSVEGE*WQGWQK
Trigger: CTTCTGCCAACCTTGCCACCACTCACCTTCCACACT...TGTTGATGGGCTGTTAAATCGGAAAGGATGTGGCTTCAGTGCCCTCAGGAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp GCTCTCAGCCAAATCAAGTCACATCTGCATGGTGCCACATTAAGGGAGGCGCCGATATGGCACAAAGTGTaGAAGGTGAGTGGTGGCAAG +
Preference number: 4 (lower is better)
Translates to: ALSQIKSHLHGATLREAPIWHKV*KVSGGK
Trigger: CTTGCCACCACTCACCTTCCACACTTTGTGCCATAT...CGGCGCCTCCCTTAATGTGGCACCATGCAGATGTGACTTGATTTGGCTGAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp TTCCCCCAAATCTCACTGCCAAGAGAGCCACCCTCTGCTTGGCATGTGCAAATCGCACCAGGTTGCCATTaGCTACAACCATTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: FPQISLPREPPSAWHVQIAPGCH*LQPLLW
Trigger: CCAAAGCAATGGTTGTAGCCAATGGCAACCTGGTGC...GATTTGCACATGCCAAGCAGAGGGTGGCTCTCTTGGCAGTGAGATTTGGGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp CACAGCAGCACAGAGCAAACAAAGCCCATAGTGTTAAGACCAAATGGAACCCTACTGGGAAGGTGGCTCTaGCCTGCAGGTCCAGACTTG +
Preference number: 4 (lower is better)
Translates to: HSSTEQTKPIVLRPNGTLLGRWL*PAGPDL
Trigger: CAAGTCTGGACCTGCAGGCCAGAGCCACCTTCCCAG...TAGGGTTCCATTTGGTCTTAACACTATGGGCTTTGTTTGCTCTGTGCTGCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp CAAAAACTAGAGGTCTTAGTGGACAAAGGCAGTGCAGCTACACATGAGGCCCAGGCGCCTTTCATGAAATaGGAGGGCAGGTGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: QKLEVLVDKGSAATHEAQAPFMK*EGRWEE
Trigger: CTCTTCCCACCTGCCCTCCCATTTCATGAAAGGCGC...CTGGGCCTCATGTGTAGCTGCACTGCCTTTGTCCACTAAGACCTCTAGTTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp AACTCTTCAATGTTCCTGCTCAGTGCAGGGTTAAATTATGCTACCATTCTGTTCGCACCAGGCTCAGGCTaGGAGGGTTCTCCCACCCGG +
Preference number: 4 (lower is better)
Translates to: NSSMFLLSAGLNYATILFAPGSG*EGSPTR
Trigger: CCGGGTGGGAGAACCCTCCCAGCCTGAGCCTGGTGC...GAACAGAATGGTAGCATAATTTAACCCTGCACTGAGCAGGAACATTGAAGAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR TCA 90 bp ACTTCAACTGTGAGCCAATCACGTCTGCCCCATGAGGAAGACGTAGCTCAGTGGGCTGGCACCTGCTGTTaGAGTTTCATGCAAGGTATA +
Preference number: 4 (lower is better)
Translates to: TSTVSQSRLPHEEDVAQWAGTCC*SFMQGI
Trigger: TATACCTTGCATGAAACTTCAACAGCAGGTGCCAGC...CCACTGAGCTACGTCTTCCTCATGGGGCAGACGTGATTGGCTCACAGTTGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR TCA 90 bp GATCTCCAATGCAGCACAAGGTCGGTGGTTGATTCTGACAGAAAGCAGAGACTTTCCCCTGTAGCCAGCTaGATGATGGCGCCTTTCATG +
Preference number: 4 (lower is better)
Translates to: DLQCSTRSVVDSDRKQRLSPVAS*MMAPFM
Trigger: CATGAAAGGCGCCATCATTCAGCTGGCTACAGGGGA...AAGTCTCTGCTTTCTGTCAGAATCAACCACCGACCTTGTGCTGCATTGGAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR TCA 90 bp CAAAAACTAGAGGTCTTAGTGGACAAAGGCAGTGCAGCTACACATGAGGCCCAGGGAGCACAGCTGGCCTaGGATACTGAGTTACTGTTC +
Preference number: 4 (lower is better)
Translates to: QKLEVLVDKGSAATHEAQGAQLA*DTELLF
Trigger: GAACAGTAACTCAGTATCTCAGGCCAGCTGTGCTCC...CTGGGCCTCATGTGTAGCTGCACTGCCTTTGTCCACTAAGACCTCTAGTTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR GCA 90 bp CAAAAACTAGAGGTCTTAGTGGACAAAGGCAGTGCAGCTACACATGAGGCCCAGGGGAGTAGCTTCTTCTaGGAGGAGAGAGGCATATGG +
Preference number: 4 (lower is better)
Translates to: QKLEVLVDKGSAATHEAQGSSFF*EERGIW
Trigger: CCATATGCCTCTCTCCTCGCAGAAGAAGCTACTCCC...CTGGGCCTCATGTGTAGCTGCACTGCCTTTGTCCACTAAGACCTCTAGTTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR GCA 90 bp GCTCTCAGCCAAATCAAGTCACATCTGCATGGTGCCACATTAAGGGAGGCGCCGTCACCAACCACGAAATaGAGCATAACAAATCCAGGC +
Preference number: 4 (lower is better)
Translates to: ALSQIKSHLHGATLREAPSPTTK*SITNPG
Trigger: GCCTGGATTTGTTATGCTGCATTTCGTGGTTGGTGA...CGGCGCCTCCCTTAATGTGGCACCATGCAGATGTGACTTGATTTGGCTGAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp GATCTCCAATGCAGCACAAGGTCGGTGGTTGATTCTGACAGAAAGCAGAGACTTCTGAGCATAGTGGACTaGGGGATAGTGGATTCCCGG +
Preference number: 4 (lower is better)
Translates to: DLQCSTRSVVDSDRKQRLLSIVD*GIVDSR
Trigger: CCGGGAATCCACTATCCCCCAGTCCACTATGCTCAG...AAGTCTCTGCTTTCTGTCAGAATCAACCACCGACCTTGTGCTGCATTGGAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp CAAAAACTAGAGGTCTTAGTGGACAAAGGCAGTGCAGCTACACATGAGGCCCAGAGTGTGGAAGGTGAGTaGTGGCAAGGTTGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: QKLEVLVDKGSAATHEAQSVEGE*WQGWQK
Trigger: CTTCTGCCAACCTTGCCACCACTCACCTTCCACACT...CTGGGCCTCATGTGTAGCTGCACTGCCTTTGTCCACTAAGACCTCTAGTTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp GATCTCCAATGCAGCACAAGGTCGGTGGTTGATTCTGACAGAAAGCAGAGACTTAATGGGCATCCGGCCTaGAGCAAGATCCAGTGGTTG +
Preference number: 4 (lower is better)
Translates to: DLQCSTRSVVDSDRKQRLNGHPA*SKIQWL
Trigger: CAACCACTGGATCTTGCTCCAGGCCGGATGCCCATT...AAGTCTCTGCTTTCTGTCAGAATCAACCACCGACCTTGTGCTGCATTGGAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp GATCTCCAATGCAGCACAAGGTCGGTGGTTGATTCTGACAGAAAGCAGAGACTTAAATGGGAGGGCAGGTaGGAAGAGGTAACGGGAGGT +
Preference number: 4 (lower is better)
Translates to: DLQCSTRSVVDSDRKQRLKWEGR*EEVTGG
Trigger: ACCTCCCGTTACCTCTTCCCACCTGCCCTCCCATTT...AAGTCTCTGCTTTCTGTCAGAATCAACCACCGACCTTGTGCTGCATTGGAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp GGGTTCCTGAGGGCACTGAAGCCACATCCTTTCCGATTTAACAGCCCATCAACACAGCTTTACCTCCTGTaGAATGAAAGAGGGACGGAG +
Preference number: 4 (lower is better)
Translates to: GFLRALKPHPFRFNSPSTQLYLL*NERGTE
Trigger: CTCCGTCCCTCTTTCATTCCACAGGAGGTAAAGCTG...TGTTGATGGGCTGTTAAATCGGAAAGGATGTGGCTTCAGTGCCCTCAGGAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR CAA 72 bp GAATGTGTCTTATCCTATGTGCACTCCTACCCTTTCTaGCTCCAAGCCTGCAAGTCCCCATCTCAGCACCCT +
Preference number: 4 (lower is better)
Translates to: ECVLSYVHSYPF*LQACKSPSQHP
Trigger: AGGGTGCTGAGATGGGGACTTGCAGGCTTGGAGCAAGAAAGGGTAGGAGTGCACATAGGATAAGACACATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR CAA 72 bp TCCAAGGATTCCGCTACAAGCAGCCCAAGCAGTGATTaGACTTCAACTGTGAGCCAATCACGTCTGCCCCAT +
Preference number: 4 (lower is better)
Translates to: SKDSATSSPSSD*TSTVSQSRLPH
Trigger: ATGGGGCAGACGTGATTGGCTCACAGTTGAAGTCAAATCACTGCTTGGGCTGCTTGTAGCGGAATCCTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR TCA 90 bp GGGTTCCTGAGGGCACTGAAGCCACATCCTTTCCGATTTAACAGCCCATCAACAGCTGGCACCTGCTGTTaGAGTTTCATGCAAGGTATA +
Preference number: 4 (lower is better)
Translates to: GFLRALKPHPFRFNSPSTAGTCC*SFMQGI
Trigger: TATACCTTGCATGAAACTTCAACAGCAGGTGCCAGC...TGTTGATGGGCTGTTAAATCGGAAAGGATGTGGCTTCAGTGCCCTCAGGAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR TCA 90 bp GCACTGAAGCCACATCCTTTCCGATTTAACAGCCCATCAACAGCATCCCCACCTTCCACTCTCGGAGTCTaGGAACCTGAAAACAACTGT +
Preference number: 4 (lower is better)
Translates to: ALKPHPFRFNSPSTASPPSTLGV*EPENNC
Trigger: ACAGTTGTTTTCAGGTTCTCAGACTCCGAGAGTGGA...AGGTGGGGATGCTGTTGATGGGCTGTTAAATCGGAAAGGATGTGGCTTCAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR TCA 90 bp GATCTCCAATGCAGCACAAGGTCGGTGGTTGATTCTGACAGAAAGCAGAGACTTGGAGCACAGCTGGCCTaGGATACTGAGTTACTGTTC +
Preference number: 4 (lower is better)
Translates to: DLQCSTRSVVDSDRKQRLGAQLA*DTELLF
Trigger: GAACAGTAACTCAGTATCTCAGGCCAGCTGTGCTCC...AAGTCTCTGCTTTCTGTCAGAATCAACCACCGACCTTGTGCTGCATTGGAGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR GCA 90 bp TTCCCCCAAATCTCACTGCCAAGAGAGCCACCCTCTGCTTGGCATGTGCAAATCCCACCTTGTACAGCATaGCATACTGATCTACTGTCA +
Preference number: 4 (lower is better)
Translates to: FPQISLPREPPSAWHVQIPPCTA*HTDLLS
Trigger: TGACAGTAGATCAGTATGGCATGCTGTACAAGGTGG...GATTTGCACATGCCAAGCAGAGGGTGGCTCTCTTGGCAGTGAGATTTGGGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR GCA 90 bp ATGGGGGCAACACAGGGAAAGGATGTGATCTCCAATGCAGCACAAGGTCGGTGGGCTGTTGAAGTTTCATaGAAGGTATATCCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: MGATQGKDVISNAAQGRWAVEVS*KVYPAG
Trigger: ACCTGCTGGATATACCTTGCATGAAACTTCAACAGC...CCACCGACCTTGTGCTGCATTGGAGATCACATCCTTTCCCTGTGTTGCCCCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR GCA 90 bp GATCTCCAATGCAGCACAAGGTCGGTGGTTGATTCTGACAGAAAGCAGAGACTTCGTGCCTCCTCCCCTTaGATGCTGAATCTTTGGAAG +
Preference number: 4 (lower is better)
Translates to: DLQCSTRSVVDSDRKQRLRASSP*MLNLWK
Trigger: CTTCCAAAGATTCAGCATGCAAGGGGAGGAGGCACG...AAGTCTCTGCTTTCTGTCAGAATCAACCACCGACCTTGTGCTGCATTGGAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp CAAAAACTAGAGGTCTTAGTGGACAAAGGCAGTGCAGCTACACATGAGGCCCAGGAGGAGAGAGGCATATaGCACAAAGTGTGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: QKLEVLVDKGSAATHEAQEERGI*HKVWKV
Trigger: CACCTTCCACACTTTGTGCCATATGCCTCTCTCCTC...CTGGGCCTCATGTGTAGCTGCACTGCCTTTGTCCACTAAGACCTCTAGTTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp CACAGCAGCACAGAGCAAACAAAGCCCATAGTGTTAAGACCAAATGGAACCCTAAATGGGCATCCGGCCTaGAGCAAGATCCAGTGGTTG +
Preference number: 4 (lower is better)
Translates to: HSSTEQTKPIVLRPNGTLNGHPA*SKIQWL
Trigger: CAACCACTGGATCTTGCTCCAGGCCGGATGCCCATT...TAGGGTTCCATTTGGTCTTAACACTATGGGCTTTGTTTGCTCTGTGCTGCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp CTGGCAGAACACAGGTTAAAAATGGACAGGATGCCTGAGAGTCTACATGGCCAGGCACCAGGTTGCCATTaGCTACAACCATTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: LAEHRLKMDRMPESLHGQAPGCH*LQPLLW
Trigger: CCAAAGCAATGGTTGTAGCCAATGGCAACCTGGTGC...CTGGCCATGTAGACTCTCAGGCATCCTGTCCATTTTTAACCTGTGTTCTGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp AAAAGTGCATTTATTACTATTATTCCTGCCGAGAAGGCTCAGCAGGGCAAGCCAGAATCTTTGGAAGCTTaGGGCTGGCCAGCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: KSAFITIIPAEKAQQGKPESLEA*GWPAGL
Trigger: CAGGCCTGCTGGCCAGCCCCAAGCTTCCAAAGATTC...TGGCTTGCCCTGCTGAGCCTTCTCGGCAGGAATAATAGTAATAAATGCACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp CAAAAACTAGAGGTCTTAGTGGACAAAGGCAGTGCAGCTACACATGAGGCCCAGCAGCTTTACCTCCTGTaGAATGAAAGAGGGACGGAG +
Preference number: 4 (lower is better)
Translates to: QKLEVLVDKGSAATHEAQQLYLL*NERGTE
Trigger: CTCCGTCCCTCTTTCATTCCACAGGAGGTAAAGCTG...CTGGGCCTCATGTGTAGCTGCACTGCCTTTGTCCACTAAGACCTCTAGTTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR TCA 90 bp AAAAGTGCATTTATTACTATTATTCCTGCCGAGAAGGCTCAGCAGGGCAAGCCACTACTGTCAGGCCAGTaGTGGCCTCAGTTCCATCAC +
Preference number: 4 (lower is better)
Translates to: KSAFITIIPAEKAQQGKPLLSGQ*WPQFHH
Trigger: GTGATGGAACTGAGGCCATCACTGGCCTGACAGTAG...TGGCTTGCCCTGCTGAGCCTTCTCGGCAGGAATAATAGTAATAAATGCACTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR TCA 90 bp AAAAGTGCATTTATTACTATTATTCCTGCCGAGAAGGCTCAGCAGGGCAAGCCACCCAATAAACTGCAGTaGGGTGGATGGGAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: KSAFITIIPAEKAQQGKPPNKLQ*GGWELS
Trigger: GCTCAGCTCCCATCCACCTCACTGCAGTTTATTGGG...TGGCTTGCCCTGCTGAGCCTTCTCGGCAGGAATAATAGTAATAAATGCACTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR TCA 90 bp ACCATAAAGGAGAGAGAAAAGACCTGTTTGTTGTTCTCTCAAAGGCAGGCAAATGCAGACTGGCCCTCCTaGGGAGTAAGAATGGGGCTG +
Preference number: 4 (lower is better)
Translates to: TIKEREKTCLLFSQRQANADWPS*GVRMGL
Trigger: CAGCCCCATTCTTACTCCTCAGGAGGGCCAGTCTGC...ATTTGCCTGCCTTTGAGAGAACAACAAACAGGTCTTTTCTCTCTCCTTTATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR GCA 90 bp GCACTGAAGCCACATCCTTTCCGATTTAACAGCCCATCAACAGCATCCCCACCTTCACCAACCACGAAATaGAGCATAACAAATCCAGGC +
Preference number: 4 (lower is better)
Translates to: ALKPHPFRFNSPSTASPPSPTTK*SITNPG
Trigger: GCCTGGATTTGTTATGCTGCATTTCGTGGTTGGTGA...AGGTGGGGATGCTGTTGATGGGCTGTTAAATCGGAAAGGATGTGGCTTCAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp ACCATAAAGGAGAGAGAAAAGACCTGTTTGTTGTTCTCTCAAAGGCAGGCAAATCTGGGAAGGTGGCTCTaGCCTGCAGGTCCAGACTTG +
Preference number: 4 (lower is better)
Translates to: TIKEREKTCLLFSQRQANLGRWL*PAGPDL
Trigger: CAAGTCTGGACCTGCAGGCCAGAGCCACCTTCCCAG...ATTTGCCTGCCTTTGAGAGAACAACAAACAGGTCTTTTCTCTCTCCTTTATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp CACAGCAGCACAGAGCAAACAAAGCCCATAGTGTTAAGACCAAATGGAACCCTAACAAAATCCTGGGTCTaGAGGTCCTCTACCCGCTTC +
Preference number: 4 (lower is better)
Translates to: HSSTEQTKPIVLRPNGTLTKSWV*RSSTRF
Trigger: GAAGCGGGTAGAGGACCTCCAGACCCAGGATTTTGT...TAGGGTTCCATTTGGTCTTAACACTATGGGCTTTGTTTGCTCTGTGCTGCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp AAAAGTGCATTTATTACTATTATTCCTGCCGAGAAGGCTCAGCAGGGCAAGCCACTGGGGGAGCACAGCTaGCCTGAGATACTGAGTTAC +
Preference number: 4 (lower is better)
Translates to: KSAFITIIPAEKAQQGKPLGEHS*PEILSY
Trigger: GTAACTCAGTATCTCAGGCCAGCTGTGCTCCCCCAG...TGGCTTGCCCTGCTGAGCCTTCTCGGCAGGAATAATAGTAATAAATGCACTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR GCA 90 bp AGACTGTTGAGTTTGCAATCTACTAGGGAAAGATCTAGGCTTAACAGGAGAACAGGCTTTCACCCTTGCTaGTGGCGGAGTCAAGGGCTT +
Preference number: 4 (lower is better)
Translates to: RLLSLQSTRERSRLNRRTGFHPC*WRSQGL
Trigger: AAGCCCTTGACTCCGCCAGCAGCAAGGGTGAAAGCC...TGTTCTCCTGTTAAGCCTAGATCTTTCCCTAGTAGATTGCAAACTCAACAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR GCA 90 bp AGACTGTTGAGTTTGCAATCTACTAGGGAAAGATCTAGGCTTAACAGGAGAACAAAGGTGGCTCTGGCCTaGAGGTCCAGACTTGATGCC +
Preference number: 4 (lower is better)
Translates to: RLLSLQSTRERSRLNRRTKVALA*RSRLDA
Trigger: GGCATCAAGTCTGGACCTGCAGGCCAGAGCCACCTT...TGTTCTCCTGTTAAGCCTAGATCTTTCCCTAGTAGATTGCAAACTCAACAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp CACAGCAGCACAGAGCAAACAAAGCCCATAGTGTTAAGACCAAATGGAACCCTAGAGGAGAGAGGCATATaGCACAAAGTGTGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: HSSTEQTKPIVLRPNGTLEERGI*HKVWKV
Trigger: CACCTTCCACACTTTGTGCCATATGCCTCTCTCCTC...TAGGGTTCCATTTGGTCTTAACACTATGGGCTTTGTTTGCTCTGTGCTGCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp ACCATAAAGGAGAGAGAAAAGACCTGTTTGTTGTTCTCTCAAAGGCAGGCAAATACCGGCACCAGTCCTTaGCTTTCACCCTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TIKEREKTCLLFSQRQANTGTSP*LSPLLL
Trigger: CAGCAGCAAGGGTGAAAGCCAAGGACTGGTGCCGGT...ATTTGCCTGCCTTTGAGAGAACAACAAACAGGTCTTTTCTCTCTCCTTTATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp GCTCTCAGCCAAATCAAGTCACATCTGCATGGTGCCACATTAAGGGAGGCGCCGCTACAACCATTGCTTTaGGTAAAGGTCTGTGTTTTA +
Preference number: 4 (lower is better)
Translates to: ALSQIKSHLHGATLREAPLQPLL*VKVCVL
Trigger: TAAAACACAGACCTTTACCCAAAGCAATGGTTGTAG...CGGCGCCTCCCTTAATGTGGCACCATGCAGATGTGACTTGATTTGGCTGAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp AACTCTTCAATGTTCCTGCTCAGTGCAGGGTTAAATTATGCTACCATTCTGTTCCCCACCTGTAGCCGATaGCAGGGCAGAGAGAAGAGT +
Preference number: 4 (lower is better)
Translates to: NSSMFLLSAGLNYATILFPTCSR*QGREKS
Trigger: ACTCTTCTCTCTGCCCTGCCATCGGCTACAGGTGGG...GAACAGAATGGTAGCATAATTTAACCCTGCACTGAGCAGGAACATTGAAGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp AGACTGTTGAGTTTGCAATCTACTAGGGAAAGATCTAGGCTTAACAGGAGAACAGAATCTTTGGAAGCTTaGGGCTGGCCAGCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: RLLSLQSTRERSRLNRRTESLEA*GWPAGL
Trigger: CAGGCCTGCTGGCCAGCCCCAAGCTTCCAAAGATTC...TGTTCTCCTGTTAAGCCTAGATCTTTCCCTAGTAGATTGCAAACTCAACAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp AAAAGTGCATTTATTACTATTATTCCTGCCGAGAAGGCTCAGCAGGGCAAGCCATGCATGCTGAATCTTTaGAAGCTTGGGGCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: KSAFITIIPAEKAQQGKPCMLNL*KLGAGQ
Trigger: CTGGCCAGCCCCAAGCTTCCAAAGATTCAGCATGCA...TGGCTTGCCCTGCTGAGCCTTCTCGGCAGGAATAATAGTAATAAATGCACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR TCA 90 bp CACAGCAGCACAGAGCAAACAAAGCCCATAGTGTTAAGACCAAATGGAACCCTATGGATTCCCGGATGTTaGATCAGTGAAGACGCTACA +
Preference number: 4 (lower is better)
Translates to: HSSTEQTKPIVLRPNGTLWIPGC*ISEDAT
Trigger: TGTAGCGTCTTCACTGATTCAACATCCGGGAATCCA...TAGGGTTCCATTTGGTCTTAACACTATGGGCTTTGTTTGCTCTGTGCTGCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR TCA 90 bp ACCATAAAGGAGAGAGAAAAGACCTGTTTGTTGTTCTCTCAAAGGCAGGCAAATCCCAATAAACTGCAGTaGGGTGGATGGGAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: TIKEREKTCLLFSQRQANPNKLQ*GGWELS
Trigger: GCTCAGCTCCCATCCACCTCACTGCAGTTTATTGGG...ATTTGCCTGCCTTTGAGAGAACAACAAACAGGTCTTTTCTCTCTCCTTTATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp AACTCTTCAATGTTCCTGCTCAGTGCAGGGTTAAATTATGCTACCATTCTGTTCCTGAGCATAGTGGACTaGGGGATAGTGGATTCCCGG +
Preference number: 4 (lower is better)
Translates to: NSSMFLLSAGLNYATILFLSIVD*GIVDSR
Trigger: CCGGGAATCCACTATCCCCCAGTCCACTATGCTCAG...GAACAGAATGGTAGCATAATTTAACCCTGCACTGAGCAGGAACATTGAAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp AACTCTTCAATGTTCCTGCTCAGTGCAGGGTTAAATTATGCTACCATTCTGTTCGTGGAAGGTGAGTGGTaGCAAGGTTGGCAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: NSSMFLLSAGLNYATILFVEGEW*QGWQKE
Trigger: CTCCTTCTGCCAACCTTGCCACCACTCACCTTCCAC...GAACAGAATGGTAGCATAATTTAACCCTGCACTGAGCAGGAACATTGAAGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp AACTCTTCAATGTTCCTGCTCAGTGCAGGGTTAAATTATGCTACCATTCTGTTCAAATGGGAGGGCAGGTaGGAAGAGGTAACGGGAGGT +
Preference number: 4 (lower is better)
Translates to: NSSMFLLSAGLNYATILFKWEGR*EEVTGG
Trigger: ACCTCCCGTTACCTCTTCCCACCTGCCCTCCCATTT...GAACAGAATGGTAGCATAATTTAACCCTGCACTGAGCAGGAACATTGAAGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR CAA 72 bp AAGGATGTGATCTCCAATGCAGCACAAGGTCGGTGGTaGATTCTGACAGAAAGCAGAGACTTCAGTACTTGC +
Preference number: 4 (lower is better)
Translates to: KDVISNAAQGRW*ILTESRDFSTC
Trigger: GCAAGTACTGAAGTCTCTGCTTTCTGTCAGAATCAACCACCGACCTTGTGCTGCATTGGAGATCACATCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR CAA 72 bp CACTTCCAAGACTATGGCCTAAGCTCCCATGGCCAATaGGATCAATCTGGTTATCTTTACCCCAATGGCTTG +
Preference number: 4 (lower is better)
Translates to: HFQDYGLSSHGQ*DQSGYLYPNGL
Trigger: CAAGCCATTGGGGTAAAGATAACCAGATTGATCCAATTGGCCATGGGAGCTTAGGCCATAGTCTTGGAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR TCA 90 bp CTGGCAGAACACAGGTTAAAAATGGACAGGATGCCTGAGAGTCTACATGGCCAGCGGATGTTGAATCAGTaGAGACGCTACATTAAATGT +
Preference number: 4 (lower is better)
Translates to: LAEHRLKMDRMPESLHGQRMLNQ*RRYIKC
Trigger: ACATTTAATGTAGCGTCTTCACTGATTCAACATCCG...CTGGCCATGTAGACTCTCAGGCATCCTGTCCATTTTTAACCTGTGTTCTGCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR TCA 90 bp ACCATAAAGGAGAGAGAAAAGACCTGTTTGTTGTTCTCTCAAAGGCAGGCAAATGACTTGTTAAATGACTaGGCTGGGGATGCGGCCTGT +
Preference number: 4 (lower is better)
Translates to: TIKEREKTCLLFSQRQANDLLND*AGDAAC
Trigger: ACAGGCCGCATCCCCAGCTCAGTCATTTAACAAGTC...ATTTGCCTGCCTTTGAGAGAACAACAAACAGGTCTTTTCTCTCTCCTTTATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR GCA 90 bp GATCTCCAATGCAGCACAAGGTCGGTGGTTGATTCTGACAGAAAGCAGAGACTTGCTGTTGAAGTTTCATaGAAGGTATATCCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: DLQCSTRSVVDSDRKQRLAVEVS*KVYPAG
Trigger: ACCTGCTGGATATACCTTGCATGAAACTTCAACAGC...AAGTCTCTGCTTTCTGTCAGAATCAACCACCGACCTTGTGCTGCATTGGAGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR GCA 90 bp CACAGCAGCACAGAGCAAACAAAGCCCATAGTGTTAAGACCAAATGGAACCCTAATGCTCACTTTGCTCTaGTGTTCACCAACCACGAAA +
Preference number: 4 (lower is better)
Translates to: HSSTEQTKPIVLRPNGTLMLTLL*CSPTTK
Trigger: TTTCGTGGTTGGTGAACAGCAGAGCAAAGTGAGCAT...TAGGGTTCCATTTGGTCTTAACACTATGGGCTTTGTTTGCTCTGTGCTGCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR GCA 90 bp AGACTGTTGAGTTTGCAATCTACTAGGGAAAGATCTAGGCTTAACAGGAGAACACGTGCCTCCTCCCCTTaGATGCTGAATCTTTGGAAG +
Preference number: 4 (lower is better)
Translates to: RLLSLQSTRERSRLNRRTRASSP*MLNLWK
Trigger: CTTCCAAAGATTCAGCATGCAAGGGGAGGAGGCACG...TGTTCTCCTGTTAAGCCTAGATCTTTCCCTAGTAGATTGCAAACTCAACAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp GATCTCCAATGCAGCACAAGGTCGGTGGTTGATTCTGACAGAAAGCAGAGACTTATAAGGAAGGCTGTATaGAGACCCAATAAACTGCAG +
Preference number: 4 (lower is better)
Translates to: DLQCSTRSVVDSDRKQRLIRKAV*RPNKLQ
Trigger: CTGCAGTTTATTGGGTCTCCATACAGCCTTCCTTAT...AAGTCTCTGCTTTCTGTCAGAATCAACCACCGACCTTGTGCTGCATTGGAGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp ACCATAAAGGAGAGAGAAAAGACCTGTTTGTTGTTCTCTCAAAGGCAGGCAAATACAAAATCCTGGGTCTaGAGGTCCTCTACCCGCTTC +
Preference number: 4 (lower is better)
Translates to: TIKEREKTCLLFSQRQANTKSWV*RSSTRF
Trigger: GAAGCGGGTAGAGGACCTCCAGACCCAGGATTTTGT...ATTTGCCTGCCTTTGAGAGAACAACAAACAGGTCTTTTCTCTCTCCTTTATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp ACCATAAAGGAGAGAGAAAAGACCTGTTTGTTGTTCTCTCAAAGGCAGGCAAATCTTCGCACAAAATCCTaGGTCTGGAGGTCCTCTACC +
Preference number: 4 (lower is better)
Translates to: TIKEREKTCLLFSQRQANLRTKS*VWRSST
Trigger: GGTAGAGGACCTCCAGACCCAGGATTTTGTGCGAAG...ATTTGCCTGCCTTTGAGAGAACAACAAACAGGTCTTTTCTCTCTCCTTTATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp AGACTGTTGAGTTTGCAATCTACTAGGGAAAGATCTAGGCTTAACAGGAGAACATGGAACGCCCTTCGATaGACAGCTTTACCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: RLLSLQSTRERSRLNRRTWNALR*TALPPV
Trigger: CACAGGAGGTAAAGCTGTCCATCGAAGGGCGTTCCA...TGTTCTCCTGTTAAGCCTAGATCTTTCCCTAGTAGATTGCAAACTCAACAGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR CAA 72 bp CCTAGGGCTCAGTTTCTTTCTGGTTTCTCCACTATATaGCTGCCGGTGGAAGAGGACATGATTTTGAGTTTC +
Preference number: 4 (lower is better)
Translates to: PRAQFLSGFSTI*LPVEEDMILSF
Trigger: GAAACTCAAAATCATGTCCTCTTCCACCGGCAGCAATATAGTGGAGAAACCAGAAAGAAACTGAGCCCTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR TCA 90 bp AACTCTTCAATGTTCCTGCTCAGTGCAGGGTTAAATTATGCTACCATTCTGTTCGCTGGCCTGAGATACTaGGTTACTGTTCAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: NSSMFLLSAGLNYATILFAGLRY*VTVQAL
Trigger: CAGAGCTTGAACAGTAACTCAGTATCTCAGGCCAGC...GAACAGAATGGTAGCATAATTTAACCCTGCACTGAGCAGGAACATTGAAGAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp ACCATAAAGGAGAGAGAAAAGACCTGTTTGTTGTTCTCTCAAAGGCAGGCAAATAGGTCTGTGTTTTACTaGTTCCTGATGGGACTGCGG +
Preference number: 4 (lower is better)
Translates to: TIKEREKTCLLFSQRQANRSVFY*FLMGLR
Trigger: CCGCAGTCCCATCAGGAACCAGTAAAACACAGACCT...ATTTGCCTGCCTTTGAGAGAACAACAAACAGGTCTTTTCTCTCTCCTTTATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp CAAAAACTAGAGGTCTTAGTGGACAAAGGCAGTGCAGCTACACATGAGGCCCAGCTACAACCATTGCTTTaGGTAAAGGTCTGTGTTTTA +
Preference number: 4 (lower is better)
Translates to: QKLEVLVDKGSAATHEAQLQPLL*VKVCVL
Trigger: TAAAACACAGACCTTTACCCAAAGCAATGGTTGTAG...CTGGGCCTCATGTGTAGCTGCACTGCCTTTGTCCACTAAGACCTCTAGTTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR CAA 72 bp AGAAACCCACACATGCAAATAACACCTAGGAATGAGTaGTTCATGAAACAGTCAGGAGATGAGGCCATCTCC +
Preference number: 4 (lower is better)
Translates to: RNPHMQITPRNE*FMKQSGDEAIS
Trigger: GGAGATGGCCTCATCTCCTGACTGTTTCATGAACAACTCATTCCTAGGTGTTATTTGCATGTGTGGGTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR CAA 72 bp CAATTGGATCAATCTGGTTATCTTTACCCCAATGGCTaGAGTCTTTCCCATCTTCAGCTAACACCAGTGCGA +
Preference number: 4 (lower is better)
Translates to: QLDQSGYLYPNG*SLSHLQLTPVR
Trigger: TCGCACTGGTGTTAGCTGAAGATGGGAAAGACTCAAGCCATTGGGGTAAAGATAACCAGATTGATCCAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR CAA 72 bp GTCCTAGGAAGTTATCACATCTCTAAAACATGGTCTTaGTCCTGCTCACTTCCAAGACTATGGCCTAAGCTC +
Preference number: 4 (lower is better)
Translates to: VLGSYHISKTWS*SCSLPRLWPKL
Trigger: GAGCTTAGGCCATAGTCTTGGAAGTGAGCAGGACAAAGACCATGTTTTAGAGATGTGATAACTTCCTAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR CAA 72 bp AGTGGAATGGCTTTGGGATCACACAGACTGTTGAGTTaGCAATCTACTAGGGAAAGATCTAGGCTTAACAGG +
Preference number: 4 (lower is better)
Translates to: SGMALGSHRLLS*QSTRERSRLNR
Trigger: CCTGTTAAGCCTAGATCTTTCCCTAGTAGATTGCAAACTCAACAGTCTGTGTGATCCCAAAGCCATTCCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR CAA 72 bp CCATCTTTACTGCCAGGCATTTACAGTGGAATGGCTTaGGGATCACACAGACTGTTGAGTTTGCAATCTACT +
Preference number: 4 (lower is better)
Translates to: PSLLPGIYSGMA*GSHRLLSLQST
Trigger: AGTAGATTGCAAACTCAACAGTCTGTGTGATCCCAAAGCCATTCCACTGTAAATGCCTGGCAGTAAAGATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR TCA 90 bp ACCATAAAGGAGAGAGAAAAGACCTGTTTGTTGTTCTCTCAAAGGCAGGCAAATTCCACTCTCGGAGTCTaGGAACCTGAAAACAACTGT +
Preference number: 4 (lower is better)
Translates to: TIKEREKTCLLFSQRQANSTLGV*EPENNC
Trigger: ACAGTTGTTTTCAGGTTCTCAGACTCCGAGAGTGGA...ATTTGCCTGCCTTTGAGAGAACAACAAACAGGTCTTTTCTCTCTCCTTTATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CCA 90 bp ACCATAAAGGAGAGAGAAAAGACCTGTTTGTTGTTCTCTCAAAGGCAGGCAAATATATGGCACAAAGTGTaGAAGGTGAGTGGTGGCAAG +
Preference number: 4 (lower is better)
Translates to: TIKEREKTCLLFSQRQANIWHKV*KVSGGK
Trigger: CTTGCCACCACTCACCTTCCACACTTTGTGCCATAT...ATTTGCCTGCCTTTGAGAGAACAACAAACAGGTCTTTTCTCTCTCCTTTATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
3UTR CAA 72 bp CTGAGAAGTACCATAAAGGAGAGAGAAAAGACCTGTTaGTTGTTCTCTCAAAGGCAGGCAAATTTTTGGAGC +
Preference number: 4 (lower is better)
Translates to: LRSTIKEREKTC*LFSQRQANFWS
Trigger: GCTCCAAAAATTTGCCTGCCTTTGAGAGAACAACAAACAGGTCTTTTCTCTCTCCTTTATGGTACTTCTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR TCA 90 bp AACTCTTCAATGTTCCTGCTCAGTGCAGGGTTAAATTATGCTACCATTCTGTTCCGGATGTTGAATCAGTaGAGACGCTACATTAAATGT +
Preference number: 4 (lower is better)
Translates to: NSSMFLLSAGLNYATILFRMLNQ*RRYIKC
Trigger: ACATTTAATGTAGCGTCTTCACTGATTCAACATCCG...GAACAGAATGGTAGCATAATTTAACCCTGCACTGAGCAGGAACATTGAAGAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS TCA 90 bp AAGAGGGACGGAGCATCGCAGCCCGTGCCTCCTCCCCTTGCATGCTaGATCTTTGGAAGCTTGGGGCTGGCCAGCAGGCCTGAGCACCAG +
Preference number: 5 (lower is better)
Translates to: KRDGASQPVPPPLAC*IFGSLGLASRPEHQ
Trigger: CTGGTGCTCAGGCCTGCTGGCCAGCCCCAAGCTTCCAAAGATTCAGCATGCAAGGGGAGGAGGCACGGGCTGCGATGCTCCGTCCCTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS GCA 90 bp ACGGGAGGTGGCGTTGGCTCCTTGTCTGGGAAGGTGGCTCTGGCCTaGAGGTCCAGACTTGATGCCACCAGGATCTCTGAGCCCACAGGC +
Preference number: 5 (lower is better)
Translates to: TGGGVGSLSGKVALA*RSRLDATRISEPTG
Trigger: GCCTGTGGGCTCAGAGATCCTGGTGGCATCAAGTCTGGACCTGCAGGCCAGAGCCACCTTCCCAGACAAGGAGCCAACGCCACCTCCCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS CCA 90 bp TCAGGCTGGGAGGGTTCTCCCACCCGGGAACCCTCTCCTGAAGGCTaGTTCTTCCCCTCGCTGTCACATAGGTCTCTGGGCCCCAAGACT +
Preference number: 5 (lower is better)
Translates to: SGWEGSPTREPSPEG*FFPSLSHRSLGPKT
Trigger: AGTCTTGGGGCCCAGAGACCTATGTGACAGCGAGGGGAAGAACCAGCCTTCAGGAGAGGGTTCCCGGGTGGGAGAACCCTCCCAGCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CAA 90 bp GTAAAGGCACATGGGCTACCGCCACACACACTGCAGGCAGGAACCCAGTCTGGGGGTGGCGTTGGCTCCTaGTCTGGGAAGGTGGCTCTG +
Preference number: 5 (lower is better)
Translates to: VKAHGLPPHTLQAGTQSGGGVGS*SGKVAL
Trigger: CAGAGCCACCTTCCCAGACAAGGAGCCAACGCCACC...CCCAGACTGGGTTCCTGCCTGCAGTGTGTGTGGCGGTAGCCCATGTGCCTTTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CAA 90 bp GTAAAGGCACATGGGCTACCGCCACACACACTGCAGGCAGGAACCCAGTCTGGGGGGCAGAGAGAAGAGTaGTGCAGTCCGCCCAGGGCT +
Preference number: 5 (lower is better)
Translates to: VKAHGLPPHTLQAGTQSGGQREE*CSPPRA
Trigger: AGCCCTGGGCGGACTGCACAACTCTTCTCTCTGCCC...CCCAGACTGGGTTCCTGCCTGCAGTGTGTGTGGCGGTAGCCCATGTGCCTTTAC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS TCA 90 bp GGGGTCCCTCGATGTGCTGGCGCCGCCACCTCCACTCTCGGAGTCTaGGAACCTGAAAACAACTGTCCATCCGCCATGCATTCCACCACC +
Preference number: 5 (lower is better)
Translates to: GVPRCAGAATSTLGV*EPENNCPSAMHSTT
Trigger: GGTGGTGGAATGCATGGCGGATGGACAGTTGTTTTCAGGTTCTCAGACTCCGAGAGTGGAGGTGGCGGCGCCAGCACATCGAGGGACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS TCA 90 bp TCGATGTGCTGGCGCCGCCACCTCCACTCTCGGAGTCTGAGAACCTaGAAACAACTGTCCATCCGCCATGCATTCCACCACCGGCACCAG +
Preference number: 5 (lower is better)
Translates to: SMCWRRHLHSRSLRT*KQLSIRHAFHHRHQ
Trigger: CTGGTGCCGGTGGTGGAATGCATGGCGGATGGACAGTTGTTTTCAGGTTCTCAGACTCCGAGAGTGGAGGTGGCGGCGCCAGCACATCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS TCA 90 bp CTGCATTGGAACGCCCTTCGATGGACAGCTTTACCTCCTGTGGAATaGAAGAGGGACGGAGCATCGCAGCCCGTGCCTCCTCCCCTTGCA +
Preference number: 5 (lower is better)
Translates to: LHWNALRWTALPPVE*KRDGASQPVPPPLA
Trigger: TGCAAGGGGAGGAGGCACGGGCTGCGATGCTCCGTCCCTCTTTCATTCCACAGGAGGTAAAGCTGTCCATCGAAGGGCGTTCCAATGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CAA 90 bp GTAAAGGCACATGGGCTACCGCCACACACACTGCAGGCAGGAACCCAGTCTGGGCCAGTGGGCACCAGGTaGCCATTGGCTACAACCATT +
Preference number: 5 (lower is better)
Translates to: VKAHGLPPHTLQAGTQSGPVGTR*PLATTI
Trigger: AATGGTTGTAGCCAATGGCAACCTGGTGCCCACTGG...CCCAGACTGGGTTCCTGCCTGCAGTGTGTGTGGCGGTAGCCCATGTGCCTTTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS GCA 90 bp CCGCCATGCATTCCACCACCGGCACCAGTCCTTGGCTTTCACCCTTaGTGCTGGCGGAGTCAAGGGCTTCACTTTCGCGTCTTACATTTC +
Preference number: 5 (lower is better)
Translates to: PPCIPPPAPVLGFHP*CWRSQGLHFRVLHF
Trigger: GAAATGTAAGACGCGAAAGTGAAGCCCTTGACTCCGCCAGCAGCAAGGGTGAAAGCCAAGGACTGGTGCCGGTGGTGGAATGCATGGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS GCA 90 bp CTTTACCTCCTGTGGAATGAAAGAGGGACGGAGCATCGCAGCCCGTaGCTCCTCCCCTTGCATGCTGAATCTTTGGAAGCTTGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: LYLLWNERGTEHRSP*LLPLHAESLEAWGW
Trigger: CCAGCCCCAAGCTTCCAAAGATTCAGCATGCAAGGGGAGGAGGCACGGGCTGCGATGCTCCGTCCCTCTTTCATTCCACAGGAGGTAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS CCA 90 bp AACAACTGTCCATCCGCCATGCATTCCACCACCGGCACCAGTCCTTaGCTTTCACCCTTGCTGCTGGCGGAGTCAAGGGCTTCACTTTCG +
Preference number: 5 (lower is better)
Translates to: NNCPSAMHSTTGTSP*LSPLLLAESRASLS
Trigger: CGAAAGTGAAGCCCTTGACTCCGCCAGCAGCAAGGGTGAAAGCCAAGGACTGGTGCCGGTGGTGGAATGCATGGCGGATGGACAGTTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS GCA 90 bp CCATGCATTCCACCACCGGCACCAGTCCTTGGCTTTCACCCTTGCTaGTGGCGGAGTCAAGGGCTTCACTTTCGCGTCTTACATTTCGCT +
Preference number: 5 (lower is better)
Translates to: PCIPPPAPVLGFHPC*WRSQGLHFRVLHFA
Trigger: AGCGAAATGTAAGACGCGAAAGTGAAGCCCTTGACTCCGCCAGCAGCAAGGGTGAAAGCCAAGGACTGGTGCCGGTGGTGGAATGCATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS GCA 90 bp CCACTCTCGGAGTCTGAGAACCTGAAAACAACTGTCCATCCGCCATaGATTCCACCACCGGCACCAGTCCTTGGCTTTCACCCTTGCTGC +
Preference number: 5 (lower is better)
Translates to: PLSESENLKTTVHPP*IPPPAPVLGFHPCC
Trigger: GCAGCAAGGGTGAAAGCCAAGGACTGGTGCCGGTGGTGGAATGCATGGCGGATGGACAGTTGTTTTCAGGTTCTCAGACTCCGAGAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS CCA 90 bp TGCATTCCACCACCGGCACCAGTCCTTGGCTTTCACCCTTGCTGCTaGCGGAGTCAAGGGCTTCACTTTCGCGTCTTACATTTCGCTCTC +
Preference number: 5 (lower is better)
Translates to: CIPPPAPVLGFHPCC*RSQGLHFRVLHFAL
Trigger: GAGAGCGAAATGTAAGACGCGAAAGTGAAGCCCTTGACTCCGCCAGCAGCAAGGGTGAAAGCCAAGGACTGGTGCCGGTGGTGGAATGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS CCA 90 bp CTCTGTAAACTGATAGAGATGCAGACATCTCCCACCTGTAGCCGATaGCAGGGCAGAGAGAAGAGTTGTGCAGTCCGCCCAGGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: LCKLIEMQTSPTCSR*QGREKSCAVRPGLQ
Trigger: CTGCAGCCCTGGGCGGACTGCACAACTCTTCTCTCTGCCCTGCCATCGGCTACAGGTGGGAGATGTCTGCATCTCTATCAGTTTACAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CAA 90 bp GCACTGAAGCCACATCCTTTCCGATTTAACAGCCCATCAACAGCATCCCCACCTGGGCAGAGAGAAGAGTaGTGCAGTCCGCCCAGGGCT +
Preference number: 5 (lower is better)
Translates to: ALKPHPFRFNSPSTASPPGQREE*CSPPRA
Trigger: AGCCCTGGGCGGACTGCACAACTCTTCTCTCTGCCC...AGGTGGGGATGCTGTTGATGGGCTGTTAAATCGGAAAGGATGTGGCTTCAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CAA 90 bp CCCTCTGCTTGGCATGTGCAAATCCTCTCGATGCTCACAGAGGCTCACCTCTGGCCGTGCCTCCTCCCCTaGCATGCTGAATCTTTGGAA +
Preference number: 5 (lower is better)
Translates to: PSAWHVQILSMLTEAHLWPCLLP*HAESLE
Trigger: TTCCAAAGATTCAGCATGCAAGGGGAGGAGGCACGG...CCAGAGGTGAGCCTCTGTGAGCATCGAGAGGATTTGCACATGCCAAGCAGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CAA 90 bp GGGTTCCTGAGGGCACTGAAGCCACATCCTTTCCGATTTAACAGCCCATCAACACACCGGCACCAGTCCTaGGCTTTCACCCTTGCTGCT +
Preference number: 5 (lower is better)
Translates to: GFLRALKPHPFRFNSPSTHRHQS*AFTLAA
Trigger: AGCAGCAAGGGTGAAAGCCAAGGACTGGTGCCGGTG...TGTTGATGGGCTGTTAAATCGGAAAGGATGTGGCTTCAGTGCCCTCAGGAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CAA 90 bp ACTTCAACTGTGAGCCAATCACGTCTGCCCCATGAGGAAGACGTAGCTCAGTGGCCTGCAGGTCCAGACTaGATGCCACCAGGATCTCTG +
Preference number: 5 (lower is better)
Translates to: TSTVSQSRLPHEEDVAQWPAGPD*MPPGSL
Trigger: CAGAGATCCTGGTGGCATCAAGTCTGGACCTGCAGG...CCACTGAGCTACGTCTTCCTCATGGGGCAGACGTGATTGGCTCACAGTTGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CAA 90 bp ATGGGGGCAACACAGGGAAAGGATGTGATCTCCAATGCAGCACAAGGTCGGTGGCCGTGCCTCCTCCCCTaGCATGCTGAATCTTTGGAA +
Preference number: 5 (lower is better)
Translates to: MGATQGKDVISNAAQGRWPCLLP*HAESLE
Trigger: TTCCAAAGATTCAGCATGCAAGGGGAGGAGGCACGG...CCACCGACCTTGTGCTGCATTGGAGATCACATCCTTTCCCTGTGTTGCCCCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CAA 90 bp ATGGGGGCAACACAGGGAAAGGATGTGATCTCCAATGCAGCACAAGGTCGGTGGGGCACCAGGTTGCCATaGGCTACAACCATTGCTTTG +
Preference number: 5 (lower is better)
Translates to: MGATQGKDVISNAAQGRWGTRLP*ATTIAL
Trigger: CAAAGCAATGGTTGTAGCCAATGGCAACCTGGTGCC...CCACCGACCTTGTGCTGCATTGGAGATCACATCCTTTCCCTGTGTTGCCCCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CAA 90 bp GGGTTCCTGAGGGCACTGAAGCCACATCCTTTCCGATTTAACAGCCCATCAACACCTGCAGGTCCAGACTaGATGCCACCAGGATCTCTG +
Preference number: 5 (lower is better)
Translates to: GFLRALKPHPFRFNSPSTPAGPD*MPPGSL
Trigger: CAGAGATCCTGGTGGCATCAAGTCTGGACCTGCAGG...TGTTGATGGGCTGTTAAATCGGAAAGGATGTGGCTTCAGTGCCCTCAGGAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CAA 90 bp GATCTCCAATGCAGCACAAGGTCGGTGGTTGATTCTGACAGAAAGCAGAGACTTGGTGGCGTTGGCTCCTaGTCTGGGAAGGTGGCTCTG +
Preference number: 5 (lower is better)
Translates to: DLQCSTRSVVDSDRKQRLGGVGS*SGKVAL
Trigger: CAGAGCCACCTTCCCAGACAAGGAGCCAACGCCACC...AAGTCTCTGCTTTCTGTCAGAATCAACCACCGACCTTGTGCTGCATTGGAGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS TCA 90 bp CTTTCTCGGGGTGTACCCAGCTGCCCTGGGGGAGCACAGCTGGCCTaGGATACTGAGTTACTGTTCAAGCTCTGTAAACTGATAGAGATG +
Preference number: 5 (lower is better)
Translates to: LSRGVPSCPGGAQLA*DTELLFKLCKLIEM
Trigger: CATCTCTATCAGTTTACAGAGCTTGAACAGTAACTCAGTATCTCAGGCCAGCTGTGCTCCCCCAGGGCAGCTGGGTACACCCCGAGAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS CCA 90 bp AGACATTTGATAATAAATGGGCATCCGGCCTGGAGCAAGATCCAGTaGTTGAGTATTCGAGTGATGTGGCAACTGGCCGGGCGGGGAGGT +
Preference number: 5 (lower is better)
Translates to: RHLIINGHPAWSKIQ*LSIRVMWQLAGRGG
Trigger: ACCTCCCCGCCCGGCCAGTTGCCACATCACTCGAATACTCAACCACTGGATCTTGCTCCAGGCCGGATGCCCATTTATTATCAAATGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CAA 90 bp GCTCTCAGCCAAATCAAGTCACATCTGCATGGTGCCACATTAAGGGAGGCGCCGTACATTTCGCTCTCGTaGTCTCTGTCCATTGGCAGC +
Preference number: 5 (lower is better)
Translates to: ALSQIKSHLHGATLREAPYISLS*SLSIGS
Trigger: GCTGCCAATGGACAGAGACAACGAGAGCGAAATGTA...CGGCGCCTCCCTTAATGTGGCACCATGCAGATGTGACTTGATTTGGCTGAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CAA 90 bp ACTTCAACTGTGAGCCAATCACGTCTGCCCCATGAGGAAGACGTAGCTCAGTGGTTGCATGCTGAATCTTaGGAAGCTTGGGGCTGGCCA +
Preference number: 5 (lower is better)
Translates to: TSTVSQSRLPHEEDVAQWLHAES*EAWGWP
Trigger: TGGCCAGCCCCAAGCTTCCAAAGATTCAGCATGCAA...CCACTGAGCTACGTCTTCCTCATGGGGCAGACGTGATTGGCTCACAGTTGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS TCA 90 bp TGGCACAGCATAAGGAAGGCTGTATGGAGACCCAATAAACTGCAGTaGGGTGGATGGGAGCTGAGCATAGTGGACTGGGGGATAGTGGAT +
Preference number: 5 (lower is better)
Translates to: WHSIRKAVWRPNKLQ*GGWELSIVDWGIVD
Trigger: ATCCACTATCCCCCAGTCCACTATGCTCAGCTCCCATCCACCTCACTGCAGTTTATTGGGTCTCCATACAGCCTTCCTTATGCTGTGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS CCA 90 bp CAGTTCCAGTGGGCACCAGGTTGCCATTGGCTACAACCATTGCTTTaGGTAAAGGTCTGTGTTTTACTGGTTCCTGATGGGACTGCGGGT +
Preference number: 5 (lower is better)
Translates to: QFQWAPGCHWLQPLL*VKVCVLLVPDGTAG
Trigger: ACCCGCAGTCCCATCAGGAACCAGTAAAACACAGACCTTTACCCAAAGCAATGGTTGTAGCCAATGGCAACCTGGTGCCCACTGGAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CAA 90 bp GCACTGAAGCCACATCCTTTCCGATTTAACAGCCCATCAACAGCATCCCCACCTGGCTGGCACCTGCTGTaGAAGTTTCATGCAAGGTAT +
Preference number: 5 (lower is better)
Translates to: ALKPHPFRFNSPSTASPPGWHLL*KFHARY
Trigger: ATACCTTGCATGAAACTTCAACAGCAGGTGCCAGCC...AGGTGGGGATGCTGTTGATGGGCTGTTAAATCGGAAAGGATGTGGCTTCAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CAA 90 bp ATGGGGGCAACACAGGGAAAGGATGTGATCTCCAATGCAGCACAAGGTCGGTGGCATTGGCTACAACCATaGCTTTGGGTAAAGGTCTGT +
Preference number: 5 (lower is better)
Translates to: MGATQGKDVISNAAQGRWHWLQP*LWVKVC
Trigger: ACAGACCTTTACCCAAAGCAATGGTTGTAGCCAATG...CCACCGACCTTGTGCTGCATTGGAGATCACATCCTTTCCCTGTGTTGCCCCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CAA 90 bp CAAAAACTAGAGGTCTTAGTGGACAAAGGCAGTGCAGCTACACATGAGGCCCAGTTGCATGCTGAATCTTaGGAAGCTTGGGGCTGGCCA +
Preference number: 5 (lower is better)
Translates to: QKLEVLVDKGSAATHEAQLHAES*EAWGWP
Trigger: TGGCCAGCCCCAAGCTTCCAAAGATTCAGCATGCAA...CTGGGCCTCATGTGTAGCTGCACTGCCTTTGTCCACTAAGACCTCTAGTTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CAA 90 bp CTGGCAGAACACAGGTTAAAAATGGACAGGATGCCTGAGAGTCTACATGGCCAGGGCTGGCACCTGCTGTaGAAGTTTCATGCAAGGTAT +
Preference number: 5 (lower is better)
Translates to: LAEHRLKMDRMPESLHGQGWHLL*KFHARY
Trigger: ATACCTTGCATGAAACTTCAACAGCAGGTGCCAGCC...CTGGCCATGTAGACTCTCAGGCATCCTGTCCATTTTTAACCTGTGTTCTGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CAA 90 bp CAAAAACTAGAGGTCTTAGTGGACAAAGGCAGTGCAGCTACACATGAGGCCCAGTACATTTCGCTCTCGTaGTCTCTGTCCATTGGCAGC +
Preference number: 5 (lower is better)
Translates to: QKLEVLVDKGSAATHEAQYISLS*SLSIGS
Trigger: GCTGCCAATGGACAGAGACAACGAGAGCGAAATGTA...CTGGGCCTCATGTGTAGCTGCACTGCCTTTGTCCACTAAGACCTCTAGTTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CAA 90 bp GATCTCCAATGCAGCACAAGGTCGGTGGTTGATTCTGACAGAAAGCAGAGACTTGGCACCAGGTTGCCATaGGCTACAACCATTGCTTTG +
Preference number: 5 (lower is better)
Translates to: DLQCSTRSVVDSDRKQRLGTRLP*ATTIAL
Trigger: CAAAGCAATGGTTGTAGCCAATGGCAACCTGGTGCC...AAGTCTCTGCTTTCTGTCAGAATCAACCACCGACCTTGTGCTGCATTGGAGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CAA 90 bp CACAGCAGCACAGAGCAAACAAAGCCCATAGTGTTAAGACCAAATGGAACCCTACCAGTGGGCACCAGGTaGCCATTGGCTACAACCATT +
Preference number: 5 (lower is better)
Translates to: HSSTEQTKPIVLRPNGTLPVGTR*PLATTI
Trigger: AATGGTTGTAGCCAATGGCAACCTGGTGCCCACTGG...TAGGGTTCCATTTGGTCTTAACACTATGGGCTTTGTTTGCTCTGTGCTGCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CAA 90 bp GCACTGAAGCCACATCCTTTCCGATTTAACAGCCCATCAACAGCATCCCCACCTCATTGGCTACAACCATaGCTTTGGGTAAAGGTCTGT +
Preference number: 5 (lower is better)
Translates to: ALKPHPFRFNSPSTASPPHWLQP*LWVKVC
Trigger: ACAGACCTTTACCCAAAGCAATGGTTGTAGCCAATG...AGGTGGGGATGCTGTTGATGGGCTGTTAAATCGGAAAGGATGTGGCTTCAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CAA 90 bp GGGTTCCTGAGGGCACTGAAGCCACATCCTTTCCGATTTAACAGCCCATCAACAGCTACAACCATTGCTTaGGGTAAAGGTCTGTGTTTT +
Preference number: 5 (lower is better)
Translates to: GFLRALKPHPFRFNSPSTATTIA*GKGLCF
Trigger: AAAACACAGACCTTTACCCAAAGCAATGGTTGTAGC...TGTTGATGGGCTGTTAAATCGGAAAGGATGTGGCTTCAGTGCCCTCAGGAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS-3UTR CAA 90 bp CACAGCAGCACAGAGCAAACAAAGCCCATAGTGTTAAGACCAAATGGAACCCTAGCTACAACCATTGCTTaGGGTAAAGGTCTGTGTTTT +
Preference number: 5 (lower is better)
Translates to: HSSTEQTKPIVLRPNGTLATTIA*GKGLCF
Trigger: AAAACACAGACCTTTACCCAAAGCAATGGTTGTAGC...TAGGGTTCCATTTGGTCTTAACACTATGGGCTTTGTTTGCTCTGTGCTGCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS CCA 72 bp GGAGGGCAGGTGGGAAGAGGTAACGGGAGGTGGCGTTaGCTCCTTGTCTGGGAAGGTGGCTCTGGCCTGCAG +
Preference number: 6 (lower is better)
Translates to: GGQVGRGNGRWR*LLVWEGGSGLQ
Trigger: CTGCAGGCCAGAGCCACCTTCCCAGACAAGGAGCCAACGCCACCTCCCGTTACCTCTTCCCACCTGCCCTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS CAA 90 bp TGGGAGGGCAGGTGGGAAGAGGTAACGGGAGGTGGCGTTGGCTCCTaGTCTGGGAAGGTGGCTCTGGCCTGCAGGTCCAGACTTGATGCC +
Preference number: 6 (lower is better)
Translates to: WEGRWEEVTGGGVGS*SGKVALACRSRLDA
Trigger: GGCATCAAGTCTGGACCTGCAGGCCAGAGCCACCTTCCCAGACAAGGAGCCAACGCCACCTCCCGTTACCTCTTCCCACCTGCCCTCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS CCA 72 bp CCATCCGCCATGCATTCCACCACCGGCACCAGTCCTTaGCTTTCACCCTTGCTGCTGGCGGAGTCAAGGGCT +
Preference number: 6 (lower is better)
Translates to: PSAMHSTTGTSP*LSPLLLAESRA
Trigger: AGCCCTTGACTCCGCCAGCAGCAAGGGTGAAAGCCAAGGACTGGTGCCGGTGGTGGAATGCATGGCGGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS CCA 72 bp GAGGGTTCTCCCACCCGGGAACCCTCTCCTGAAGGCTaGTTCTTCCCCTCGCTGTCACATAGGTCTCTGGGC +
Preference number: 6 (lower is better)
Translates to: EGSPTREPSPEG*FFPSLSHRSLG
Trigger: GCCCAGAGACCTATGTGACAGCGAGGGGAAGAACCAGCCTTCAGGAGAGGGTTCCCGGGTGGGAGAACCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS CAA 72 bp TCCATCCGCCATGCATTCCACCACCGGCACCAGTCCTaGGCTTTCACCCTTGCTGCTGGCGGAGTCAAGGGC +
Preference number: 6 (lower is better)
Translates to: SIRHAFHHRHQS*AFTLAAGGVKG
Trigger: GCCCTTGACTCCGCCAGCAGCAAGGGTGAAAGCCAAGGACTGGTGCCGGTGGTGGAATGCATGGCGGATGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS CAA 72 bp AGGTGGGAAGAGGTAACGGGAGGTGGCGTTGGCTCCTaGTCTGGGAAGGTGGCTCTGGCCTGCAGGTCCAGA +
Preference number: 6 (lower is better)
Translates to: RWEEVTGGGVGS*SGKVALACRSR
Trigger: TCTGGACCTGCAGGCCAGAGCCACCTTCCCAGACAAGGAGCCAACGCCACCTCCCGTTACCTCTTCCCACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS CAA 90 bp TGGAATGAAAGAGGGACGGAGCATCGCAGCCCGTGCCTCCTCCCCTaGCATGCTGAATCTTTGGAAGCTTGGGGCTGGCCAGCAGGCCTG +
Preference number: 6 (lower is better)
Translates to: WNERGTEHRSPCLLP*HAESLEAWGWPAGL
Trigger: CAGGCCTGCTGGCCAGCCCCAAGCTTCCAAAGATTCAGCATGCAAGGGGAGGAGGCACGGGCTGCGATGCTCCGTCCCTCTTTCATTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS GCA 72 bp GGCGTTGGCTCCTTGTCTGGGAAGGTGGCTCTGGCCTaGAGGTCCAGACTTGATGCCACCAGGATCTCTGAG +
Preference number: 6 (lower is better)
Translates to: GVGSLSGKVALA*RSRLDATRISE
Trigger: CTCAGAGATCCTGGTGGCATCAAGTCTGGACCTGCAGGCCAGAGCCACCTTCCCAGACAAGGAGCCAACGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS CAA 72 bp TGTCTGGGAAGGTGGCTCTGGCCTGCAGGTCCAGACTaGATGCCACCAGGATCTCTGAGCCCACAGGCAGCA +
Preference number: 6 (lower is better)
Translates to: CLGRWLWPAGPD*MPPGSLSPQAA
Trigger: TGCTGCCTGTGGGCTCAGAGATCCTGGTGGCATCAAGTCTGGACCTGCAGGCCAGAGCCACCTTCCCAGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS GCA 72 bp CCACCACCGGCACCAGTCCTTGGCTTTCACCCTTGCTaGTGGCGGAGTCAAGGGCTTCACTTTCGCGTCTTA +
Preference number: 6 (lower is better)
Translates to: PPPAPVLGFHPC*WRSQGLHFRVL
Trigger: TAAGACGCGAAAGTGAAGCCCTTGACTCCGCCAGCAGCAAGGGTGAAAGCCAAGGACTGGTGCCGGTGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS GCA 72 bp ATTCCACCACCGGCACCAGTCCTTGGCTTTCACCCTTaGTGCTGGCGGAGTCAAGGGCTTCACTTTCGCGTC +
Preference number: 6 (lower is better)
Translates to: IPPPAPVLGFHP*CWRSQGLHFRV
Trigger: GACGCGAAAGTGAAGCCCTTGACTCCGCCAGCAGCAAGGGTGAAAGCCAAGGACTGGTGCCGGTGGTGGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS CCA 72 bp CCACTCACTTCCGCACTTCGCACAAAATCCTGGGTCTaGAGGTCCTCTACCCGCTTCAGCTCCCCTGTAGCC +
Preference number: 6 (lower is better)
Translates to: PLTSALRTKSWV*RSSTRFSSPVA
Trigger: GGCTACAGGGGAGCTGAAGCGGGTAGAGGACCTCCAGACCCAGGATTTTGTGCGAAGTGCGGAAGTGAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS CAA 72 bp CATTCCACCACCGGCACCAGTCCTTGGCTTTCACCCTaGCTGCTGGCGGAGTCAAGGGCTTCACTTTCGCGT +
Preference number: 6 (lower is better)
Translates to: HSTTGTSPWLSP*LLAESRASLSR
Trigger: ACGCGAAAGTGAAGCCCTTGACTCCGCCAGCAGCAAGGGTGAAAGCCAAGGACTGGTGCCGGTGGTGGAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS TCA 72 bp TGGCGCCGCCACCTCCACTCTCGGAGTCTGAGAACCTaGAAACAACTGTCCATCCGCCATGCATTCCACCAC +
Preference number: 6 (lower is better)
Translates to: WRRHLHSRSLRT*KQLSIRHAFHH
Trigger: GTGGTGGAATGCATGGCGGATGGACAGTTGTTTTCAGGTTCTCAGACTCCGAGAGTGGAGGTGGCGGCGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS TCA 72 bp CGATGTGCTGGCGCCGCCACCTCCACTCTCGGAGTCTaGGAACCTGAAAACAACTGTCCATCCGCCATGCAT +
Preference number: 6 (lower is better)
Translates to: RCAGAATSTLGV*EPENNCPSAMH
Trigger: ATGCATGGCGGATGGACAGTTGTTTTCAGGTTCTCAGACTCCGAGAGTGGAGGTGGCGGCGCCAGCACATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS TCA 72 bp AACGCCCTTCGATGGACAGCTTTACCTCCTGTGGAATaGAAGAGGGACGGAGCATCGCAGCCCGTGCCTCCT +
Preference number: 6 (lower is better)
Translates to: NALRWTALPPVE*KRDGASQPVPP
Trigger: AGGAGGCACGGGCTGCGATGCTCCGTCCCTCTTTCATTCCACAGGAGGTAAAGCTGTCCATCGAAGGGCGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS CCA 72 bp CCACCGGCACCAGTCCTTGGCTTTCACCCTTGCTGCTaGCGGAGTCAAGGGCTTCACTTTCGCGTCTTACAT +
Preference number: 6 (lower is better)
Translates to: PPAPVLGFHPCC*RSQGLHFRVLH
Trigger: ATGTAAGACGCGAAAGTGAAGCCCTTGACTCCGCCAGCAGCAAGGGTGAAAGCCAAGGACTGGTGCCGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS CAA 90 bp GGCGGAGTCAAGGGCTTCACTTTCGCGTCTTACATTTCGCTCTCGTaGTCTCTGTCCATTGGCAGCAGCTGCTTCCAGAGCAGACTGGCC +
Preference number: 6 (lower is better)
Translates to: GGVKGFTFASYISLS*SLSIGSSCFQSRLA
Trigger: GGCCAGTCTGCTCTGGAAGCAGCTGCTGCCAATGGACAGAGACAACGAGAGCGAAATGTAAGACGCGAAAGTGAAGCCCTTGACTCCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS CAA 90 bp TCCGCCATGCATTCCACCACCGGCACCAGTCCTTGGCTTTCACCCTaGCTGCTGGCGGAGTCAAGGGCTTCACTTTCGCGTCTTACATTT +
Preference number: 6 (lower is better)
Translates to: SAMHSTTGTSPWLSP*LLAESRASLSRLTF
Trigger: AAATGTAAGACGCGAAAGTGAAGCCCTTGACTCCGCCAGCAGCAAGGGTGAAAGCCAAGGACTGGTGCCGGTGGTGGAATGCATGGCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS CAA 90 bp AAACAACTGTCCATCCGCCATGCATTCCACCACCGGCACCAGTCCTaGGCTTTCACCCTTGCTGCTGGCGGAGTCAAGGGCTTCACTTTC +
Preference number: 6 (lower is better)
Translates to: KQLSIRHAFHHRHQS*AFTLAAGGVKGFTF
Trigger: GAAAGTGAAGCCCTTGACTCCGCCAGCAGCAAGGGTGAAAGCCAAGGACTGGTGCCGGTGGTGGAATGCATGGCGGATGGACAGTTGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS CAA 72 bp ATAAATGGGCATCCGGCCTGGAGCAAGATCCAGTGGTaGAGTATTCGAGTGATGTGGCAACTGGCCGGGCGG +
Preference number: 6 (lower is better)
Translates to: INGHPAWSKIQW*SIRVMWQLAGR
Trigger: CCGCCCGGCCAGTTGCCACATCACTCGAATACTCAACCACTGGATCTTGCTCCAGGCCGGATGCCCATTTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS CAA 90 bp CATTTGATAATAAATGGGCATCCGGCCTGGAGCAAGATCCAGTGGTaGAGTATTCGAGTGATGTGGCAACTGGCCGGGCGGGGAGGTGGC +
Preference number: 6 (lower is better)
Translates to: HLIINGHPAWSKIQW*SIRVMWQLAGRGGG
Trigger: GCCACCTCCCCGCCCGGCCAGTTGCCACATCACTCGAATACTCAACCACTGGATCTTGCTCCAGGCCGGATGCCCATTTATTATCAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS CAA 72 bp GGCAGCAGGCTAGGGTCAGTTCCAGTGGGCACCAGGTaGCCATTGGCTACAACCATTGCTTTGGGTAAAGGT +
Preference number: 6 (lower is better)
Translates to: GSRLGSVPVGTR*PLATTIALGKG
Trigger: ACCTTTACCCAAAGCAATGGTTGTAGCCAATGGCAACCTGGTGCCCACTGGAACTGACCCTAGCCTGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS CAA 90 bp GAGCCCACAGGCAGCAGGCTAGGGTCAGTTCCAGTGGGCACCAGGTaGCCATTGGCTACAACCATTGCTTTGGGTAAAGGTCTGTGTTTT +
Preference number: 6 (lower is better)
Translates to: EPTGSRLGSVPVGTR*PLATTIALGKGLCF
Trigger: AAAACACAGACCTTTACCCAAAGCAATGGTTGTAGCCAATGGCAACCTGGTGCCCACTGGAACTGACCCTAGCCTGCTGCCTGTGGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS GCA 72 bp GAGTCTGAGAACCTGAAAACAACTGTCCATCCGCCATaGATTCCACCACCGGCACCAGTCCTTGGCTTTCAC +
Preference number: 6 (lower is better)
Translates to: ESENLKTTVHPP*IPPPAPVLGFH
Trigger: GTGAAAGCCAAGGACTGGTGCCGGTGGTGGAATGCATGGCGGATGGACAGTTGTTTTCAGGTTCTCAGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS TCA 72 bp ATAAGGAAGGCTGTATGGAGACCCAATAAACTGCAGTaGGGTGGATGGGAGCTGAGCATAGTGGACTGGGGG +
Preference number: 6 (lower is better)
Translates to: IRKAVWRPNKLQ*GGWELSIVDWG
Trigger: CCCCCAGTCCACTATGCTCAGCTCCCATCCACCTCACTGCAGTTTATTGGGTCTCCATACAGCCTTCCTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS CCA 72 bp TTCTTCTGCGAGGAGAGAGGCATATGGCACAAAGTGTaGAAGGTGAGTGGTGGCAAGGTTGGCAGAAGGAGA +
Preference number: 6 (lower is better)
Translates to: FFCEERGIWHKV*KVSGGKVGRRR
Trigger: TCTCCTTCTGCCAACCTTGCCACCACTCACCTTCCACACTTTGTGCCATATGCCTCTCTCCTCGCAGAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS CCA 72 bp ATAATAAATGGGCATCCGGCCTGGAGCAAGATCCAGTaGTTGAGTATTCGAGTGATGTGGCAACTGGCCGGG +
Preference number: 6 (lower is better)
Translates to: IINGHPAWSKIQ*LSIRVMWQLAG
Trigger: CCCGGCCAGTTGCCACATCACTCGAATACTCAACCACTGGATCTTGCTCCAGGCCGGATGCCCATTTATTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS CAA 72 bp AGGCTAGGGTCAGTTCCAGTGGGCACCAGGTTGCCATaGGCTACAACCATTGCTTTGGGTAAAGGTCTGTGT +
Preference number: 6 (lower is better)
Translates to: RLGSVPVGTRLP*ATTIALGKGLC
Trigger: ACACAGACCTTTACCCAAAGCAATGGTTGTAGCCAATGGCAACCTGGTGCCCACTGGAACTGACCCTAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS CAA 90 bp ACAGGCAGCAGGCTAGGGTCAGTTCCAGTGGGCACCAGGTTGCCATaGGCTACAACCATTGCTTTGGGTAAAGGTCTGTGTTTTACTGGT +
Preference number: 6 (lower is better)
Translates to: TGSRLGSVPVGTRLP*ATTIALGKGLCFTG
Trigger: ACCAGTAAAACACAGACCTTTACCCAAAGCAATGGTTGTAGCCAATGGCAACCTGGTGCCCACTGGAACTGACCCTAGCCTGCTGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS CAA 72 bp TTCCAGTGGGCACCAGGTTGCCATTGGCTACAACCATaGCTTTGGGTAAAGGTCTGTGTTTTACTGGTTCCT +
Preference number: 6 (lower is better)
Translates to: FQWAPGCHWLQP*LWVKVCVLLVP
Trigger: AGGAACCAGTAAAACACAGACCTTTACCCAAAGCAATGGTTGTAGCCAATGGCAACCTGGTGCCCACTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2
CDS TCA 72 bp AAATGCAGCATAACAAATCCAGGCCACTGGCTCTCCTaGATGTCCACGACTGTGCTAGAGTCAATTTTCAGC +
Preference number: 6 (lower is better)
Translates to: KCSITNPGHWLS*MSTTVLESIFS
Trigger: GCTGAAAATTGACTCTAGCACAGTCGTGGACATTCAGGAGAGCCAGTGGCCTGGATTTGTTATGCTGCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093162.4
ENSMUST00000212605.2