RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATXN1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000046876

Ensembl transcript IDs: ENSMUST00000091628.11, ENSMUST00000167708.4, ENSMUST00000180110.9

Found 530 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AACCAGTGTGGGTGCTCCCTCCGTCCCTCCCGCCCCACTGCTACCTaGCTGACCAGGAGTGACCTGAGCAAGGACTTTCCCTGCCCACCA +
Preference number: 1 (lower is better)
Translates to: NQCGCSLRPSRPTAT*LTRSDLSKDFPCPP
Trigger: TGGTGGGCAGGGAAAGTCCTTGCTCAGGTCACTCCTGGTCAGGCAGGTAGCAGTGGGGCGGGAGGGACGGAGGGAGCACCCACACTGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR TCA 90 bp CTCCCTCCGTCCCTCCCGCCCCACTGCTACCTGCCTGACCAGGAGTaGCCTGAGCAAGGACTTTCCCTGCCCACCATGACGACTGATGAT +
Preference number: 1 (lower is better)
Translates to: LPPSLPPHCYLPDQE*PEQGLSLPTMTTDD
Trigger: ATCATCAGTCGTCATGGTGGGCAGGGAAAGTCCTTGCTCAGGTCACTCCTGGTCAGGCAGGTAGCAGTGGGGCGGGAGGGACGGAGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR TCA 90 bp GACCCGGAGACTGGAGGCCCTGTATTCCCCTGGAGTCAAAGGGGGTaGCTGGGAAATGAGGAGCGAAGGGCTCTCGAGAGAGAGAGCAGA +
Preference number: 1 (lower is better)
Translates to: DPETGGPVFPWSQRG*LGNEERRALERESR
Trigger: TCTGCTCTCTCTCTCGAGAGCCCTTCGCTCCTCATTTCCCAGTCACCCCCTTTGACTCCAGGGGAATACAGGGCCTCCAGTCTCCGGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR CCA 90 bp CGGAGACTGGAGGCCCTGTATTCCCCTGGAGTCAAAGGGGGTGACTaGGAAATGAGGAGCGAAGGGCTCTCGAGAGAGAGAGCAGACCAG +
Preference number: 1 (lower is better)
Translates to: RRLEALYSPGVKGGD*EMRSEGLSRERADQ
Trigger: CTGGTCTGCTCTCTCTCTCGAGAGCCCTTCGCTCCTCATTTCCCAGTCACCCCCTTTGACTCCAGGGGAATACAGGGCCTCCAGTCTCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR GCA 90 bp ACAGAGCGAGGGGCCTTTGCAGAGTGTGGTGACGGACCTTCAAAGTaGTTCCCTCAGGTCTCCTTGGCTGGCTCTCACTGTGTCCTGGTG +
Preference number: 1 (lower is better)
Translates to: TERGAFAECGDGPSK*FPQVSLAGSHCVLV
Trigger: CACCAGGACACAGTGAGAGCCAGCCAAGGAGACCTGAGGGAAGCACTTTGAAGGTCCGTCACCACACTCTGCAAAGGCCCCTCGCTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR CCA 90 bp GGGGAGGGGGCAGTAGTCACAGAATGGGACTGTGGTGGGTTGCCATaGTTACGCCTCATCATGGACTCAACAGTGCATCCCACCCTTGGA +
Preference number: 1 (lower is better)
Translates to: GEGAVVTEWDCGGLP*LRLIMDSTVHPTLG
Trigger: TCCAAGGGTGGGATGCACTGTTGAGTCCATGATGAGGCGTAACCATGGCAACCCACCACAGTCCCATTCTGTGACTACTGCCCCCTCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR CCA 90 bp CTGCAGGGTTCCTTGCAAGGGAGAAAGGACGCTGCCACTTCCTTATaGGGTAAGGGGGTGGGGAGGAACCCAACAAGCTCACCTAACAGA +
Preference number: 1 (lower is better)
Translates to: LQGSLQGRKDAATSL*GKGVGRNPTSSPNR
Trigger: TCTGTTAGGTGAGCTTGTTGGGTTCCTCCCCACCCCCTTACCCCATAAGGAAGTGGCAGCGTCCTTTCTCCCTTGCAAGGAACCCTGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR CCA 90 bp AGTGTGGGTTGGGGAGGGGGCAGTAGTCACAGAATGGGACTGTGGTaGGTTGCCATGGTTACGCCTCATCATGGACTCAACAGTGCATCC +
Preference number: 1 (lower is better)
Translates to: SVGWGGGSSHRMGLW*VAMVTPHHGLNSAS
Trigger: GGATGCACTGTTGAGTCCATGATGAGGCGTAACCATGGCAACCCACCACAGTCCCATTCTGTGACTACTGCCCCCTCCCCAACCCACACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR CCA 90 bp AGCAGTGTGGGTTGGGGAGGGGGCAGTAGTCACAGAATGGGACTGTaGTGGGTTGCCATGGTTACGCCTCATCATGGACTCAACAGTGCA +
Preference number: 1 (lower is better)
Translates to: SSVGWGGGSSHRMGL*WVAMVTPHHGLNSA
Trigger: TGCACTGTTGAGTCCATGATGAGGCGTAACCATGGCAACCCACCACAGTCCCATTCTGTGACTACTGCCCCCTCCCCAACCCACACTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR TCA 90 bp TGCAAAGAGGACAGGTACAGAGGCGCGTGGCTGATCCTTGTCCGATaGGGGCACTGCTATTACCGTGCTCCCTACACAGTTGACCAAAGG +
Preference number: 1 (lower is better)
Translates to: CKEDRYRGAWLILVR*GHCYYRAPYTVDQR
Trigger: CCTTTGGTCAACTGTGTAGGGAGCACGGTAATAGCAGTGCCCTCATCGGACAAGGATCAGCCACGCGCCTCTGTACCTGTCCTCTTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR GCA 90 bp CATGGTTCTGACCATCCTCCACCCACCAGCTCCTCAACAGACCCTTaGAGACAATGCAAACGCACCAGTCTCCTGCGACACACCTGTTTG +
Preference number: 1 (lower is better)
Translates to: HGSDHPPPTSSSTDP*RQCKRTSLLRHTCL
Trigger: CAAACAGGTGTGTCGCAGGAGACTGGTGCGTTTGCATTGTCTGCAAGGGTCTGTTGAGGAGCTGGTGGGTGGAGGATGGTCAGAACCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
3UTR GCA 90 bp CTGTGTTTGTTCTTGAAACCAGTGGGAACTGATGCCCCTCGACTCTaGACACTGCCGGAGAAGGCAGGGGCTGATGAAGCCACATTCAGG +
Preference number: 1 (lower is better)
Translates to: LCLFLKPVGTDAPRL*TLPEKAGADEATFR
Trigger: CCTGAATGTGGCTTCATCAGCCCCTGCCTTCTCCGGCAGTGTGCAGAGTCGAGGGGCATCAGTTCCCACTGGTTTCAAGAACAAACACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
3UTR GCA 90 bp TCCTGTTTGAAGAGAAAGCTGTCCCAAGGGAATGGTGACTGTGGTTaGCAGGTTGCCCTCCAAAGCCACTGGTGGGCATGCTCAGAACAC +
Preference number: 1 (lower is better)
Translates to: SCLKRKLSQGNGDCG*QVALQSHWWACSEH
Trigger: GTGTTCTGAGCATGCCCACCAGTGGCTTTGGAGGGCAACCTGGCAACCACAGTCACCATTCCCTTGGGACAGCTTTCTCTTCAAACAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR GCA 90 bp ACACACACACCAGCCCCATCCCTGAGTAAGAGGTGTGGAAGGTTCTaGAGGGTTCCTTGCAAGGGAGAAAGGACGCTGCCACTTCCTTAT +
Preference number: 1 (lower is better)
Translates to: THTPAPSLSKRCGRF*RVPCKGERTLPLPY
Trigger: ATAAGGAAGTGGCAGCGTCCTTTCTCCCTTGCAAGGAACCCTGCAGAACCTTCCACACCTCTTACTCAGGGATGGGGCTGGTGTGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR GCA 90 bp GAGCCTGGAGGACCCCACCAATGTCTGCAAATAAGAGGTGGCTCCTaGCTCTGTGTGTTCTTCCTGTTTGAAGAGAAAGCTGTCCCAAGG +
Preference number: 1 (lower is better)
Translates to: EPGGPHQCLQIRGGS*LCVFFLFEEKAVPR
Trigger: CCTTGGGACAGCTTTCTCTTCAAACAGGAAGAACACACAGAGGCAGGAGCCACCTCTTATTTGCAGACATTGGTGGGGTCCTCCAGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR TCA 90 bp CTGTTGGTAAATATTGCAAAGAGGACAGGTACAGAGGCGCGTGGCTaGTCCTTGTCCGATGAGGGCACTGCTATTACCGTGCTCCCTACA +
Preference number: 1 (lower is better)
Translates to: LLVNIAKRTGTEARG*SLSDEGTAITVLPT
Trigger: TGTAGGGAGCACGGTAATAGCAGTGCCCTCATCGGACAAGGATCAGCCACGCGCCTCTGTACCTGTCCTCTTTGCAATATTTACCAACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR CCA 90 bp TGTGGCTCAGGAAACAGTTGCCATGCCAACTCAACTTACAAAGTCTaGCTTTCTATCCCAAGAGCTCTGCCTCCTCACCCGTGTCTGAAA +
Preference number: 1 (lower is better)
Translates to: CGSGNSCHANSTYKV*LSIPRALPPHPCLK
Trigger: TTTCAGACACGGGTGAGGAGGCAGAGCTCTTGGGATAGAAAGCCAGACTTTGTAAGTTGAGTTGGCATGGCAACTGTTTCCTGAGCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR GCA 90 bp CAGACCAGTTGGTTGAGGGTCTTGTGGCTCAGGAAACAGTTGCCATaGCAACTCAACTTACAAAGTCTGGCTTTCTATCCCAAGAGCTCT +
Preference number: 1 (lower is better)
Translates to: QTSWLRVLWLRKQLP*QLNLQSLAFYPKSS
Trigger: AGAGCTCTTGGGATAGAAAGCCAGACTTTGTAAGTTGAGTTGGCATGGCAACTGTTTCCTGAGCCACAAGACCCTCAACCAACTGGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR CCA 90 bp TGGGGAGGAACCCAACAAGCTCACCTAACAGAAAACATACAAGGTTaGGGTTCAGAGTTAAGGACGTTCTGTTGCCACCACCACAAACAT +
Preference number: 1 (lower is better)
Translates to: WGGTQQAHLTENIQG*GSELRTFCCHHHKH
Trigger: ATGTTTGTGGTGGTGGCAACAGAACGTCCTTAACTCTGAACCCCAACCTTGTATGTTTTCTGTTAGGTGAGCTTGTTGGGTTCCTCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR TCA 90 bp CCTGTAAGAACTGGAGAAAACCTGTGCACCAACCTTCTTAGTAACTaGTCTTTCACTCCAACAGTTCTAAGCCAGTGTCACCTCAGCTCG +
Preference number: 1 (lower is better)
Translates to: PVRTGENLCTNLLSN*SFTPTVLSQCHLSS
Trigger: CGAGCTGAGGTGACACTGGCTTAGAACTGTTGGAGTGAAAGATCAGTTACTAAGAAGGTTGGTGCACAGGTTTTCTCCAGTTCTTACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR TCA 90 bp TGTAGACGGTATCTATTGGCCAAACACACTTCATCTGAATACAGGTaGAGTTCCTGTATGCACGTGTCAGGATGTGAAAAGCTGACCCGA +
Preference number: 1 (lower is better)
Translates to: CRRYLLAKHTSSEYR*SSCMHVSGCEKLTR
Trigger: TCGGGTCAGCTTTTCACATCCTGACACGTGCATACAGGAACTTCACCTGTATTCAGATGAAGTGTGTTTGGCCAATAGATACCGTCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR GCA 90 bp GCATATGCCTTTAACTCTTTCTCCAACATCAAAGTGACAAGTGCCTaGCGTCAGGTAGTACTCGGTAGTCATATATTGTCACGGGCTAGT +
Preference number: 1 (lower is better)
Translates to: AYAFNSFSNIKVTSA*RQVVLGSHILSRAS
Trigger: ACTAGCCCGTGACAATATATGACTACCGAGTACTACCTGACGGCAGGCACTTGTCACTTTGATGTTGGAGAAAGAGTTAAAGGCATATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR GCA 90 bp CATTATATTGCAATCTGTGCAGTAGCTAAGGAGCAATCCACACTGTaGGGGGAGATCCAAACATTCCTTGAAATTGTACAACCCTACTCC +
Preference number: 1 (lower is better)
Translates to: HYIAICAVAKEQSTL*GEIQTFLEIVQPYS
Trigger: GGAGTAGGGTTGTACAATTTCAAGGAATGTTTGGATCTCCCCGCACAGTGTGGATTGCTCCTTAGCTACTGCACAGATTGCAATATAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR GCA 90 bp AAGAAATCCCAGCTCCAGAGTAGAGGTGTGCAAACTGTTTCGAGTTaGCTTAGGAACAGAAATACAACACTGTTCATGGACAGGGAGAAA +
Preference number: 1 (lower is better)
Translates to: KKSQLQSRGVQTVSS*LRNRNTTLFMDREK
Trigger: TTTCTCCCTGTCCATGAACAGTGTTGTATTTCTGTTCCTAAGGCAACTCGAAACAGTTTGCACACCTCTACTCTGGAGCTGGGATTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR GCA 90 bp AGCGAGGTCATCTATGAAAGAAATCCCAGCTCCAGAGTAGAGGTGTaGAAACTGTTTCGAGTTGCCTTAGGAACAGAAATACAACACTGT +
Preference number: 1 (lower is better)
Translates to: SEVIYERNPSSRVEV*KLFRVALGTEIQHC
Trigger: ACAGTGTTGTATTTCTGTTCCTAAGGCAACTCGAAACAGTTTGCACACCTCTACTCTGGAGCTGGGATTTCTTTCATAGATGACCTCGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR CCA 90 bp AAACTGTTTCGAGTTGCCTTAGGAACAGAAATACAACACTGTTCATaGACAGGGAGAAAACCAACCCAACTCAACAGGTCATACGCATGT +
Preference number: 1 (lower is better)
Translates to: KLFRVALGTEIQHCS*TGRKPTQLNRSYAC
Trigger: ACATGCGTATGACCTGTTGAGTTGGGTTGGTTTTCTCCCTGTCCATGAACAGTGTTGTATTTCTGTTCCTAAGGCAACTCGAAACAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR CCA 90 bp CTTAACTCCTTTCAGTTAAAAAGTGTTAGGGAAGTTCTTAGAGACTaGTATCATGTAGACGGTATCTATTGGCCAAACACACTTCATCTG +
Preference number: 1 (lower is better)
Translates to: LNSFQLKSVREVLRD*YHVDGIYWPNTLHL
Trigger: CAGATGAAGTGTGTTTGGCCAATAGATACCGTCTACATGATACCAGTCTCTAAGAACTTCCCTAACACTTTTTAACTGAAAGGAGTTAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR TCA 90 bp GACGGATGCTTCGGAAGAATCAATGATTTGTATAATTCCTATACCTaGAATAGAACCACAAGTTATGATATTCCTATTGCTCTGAGCCAT +
Preference number: 1 (lower is better)
Translates to: DGCFGRINDLYNSYT*NRTTSYDIPIALSH
Trigger: ATGGCTCAGAGCAATAGGAATATCATAACTTGTGGTTCTATTTCAGGTATAGGAATTATACAAATCATTGATTCTTCCGAAGCATCCGTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR CCA 90 bp AAATACAACATTTTACACTGGAATTACAGAGAGTATGCACGCATATaGAAACGTTCTCCTGTCACGATAAAAGCTCTTAACTATGTATGC +
Preference number: 1 (lower is better)
Translates to: KYNILHWNYREYARI*KRSPVTIKALNYVC
Trigger: GCATACATAGTTAAGAGCTTTTATCGTGACAGGAGAACGTTTCCATATGCGTGCATACTCTCTGTAATTCCAGTGTAAAATGTTGTATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR-3UTR TCA 90 bp TACCGTGCTCCCTACACAGTTGACCAAAGGTGCTCCGGGAGCCTGGAGGACCCCAAGGGAGCCAGAGAATaGGATGGGACGGATGCTTCG +
Preference number: 2 (lower is better)
Translates to: YRAPYTVDQRCSGSLEDPKGARE*DGTDAS
Trigger: CGAAGCATCCGTCCCATCTCATTCTCTGGCTCCCTT...GGGGTCCTCCAGGCTCCCGGAGCACCTTTGGTCAACTGTGTAGGGAGCACGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR-3UTR GCA 90 bp CACTCCTTCACAAGGGACACGCACCCAGACACTCCCTTGCAGGATACTTCCCACCTCGACTCTGCACACTaGCGGAGAAGGCAGGGGCTG +
Preference number: 2 (lower is better)
Translates to: HSFTRDTHPDTPLQDTSHLDSAH*RRRQGL
Trigger: CAGCCCCTGCCTTCTCCGGCAGTGTGCAGAGTCGAG...GTGGGAAGTATCCTGCAAGGGAGTGTCTGGGTGCGTGTCCCTTGTGAAGGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
3UTR-3UTR TCA 90 bp CCATCTGCCTGTCTGATGTCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGATGCCCCCAACCCCACACTaGGAGGGAGCAAGTGAGGGA +
Preference number: 2 (lower is better)
Translates to: PSACLMSPYNAWKLGSLMPPTPH*EGASEG
Trigger: TCCCTCACTTGCTCCCTCTCAGTGTGGGGTTGGGGG...CATCAGGGAACCCAGCTTCCAGGCATTGTAGGGAGACATCAGACAGGCAGATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
3UTR CAA 90 bp GCAGAGTGTGGTGACGGACCTTCAAAGTGCTTCCCTCAGGTCTCCTaGGCTGGCTCTCACTGTGTCCTGGTGACAGACACACACAGGCTC +
Preference number: 2 (lower is better)
Translates to: AECGDGPSKCFPQVS*AGSHCVLVTDTHRL
Trigger: GAGCCTGTGTGTGTCTGTCACCAGGACACAGTGAGAGCCAGCCAAGGAGACCTGAGGGAAGCACTTTGAAGGTCCGTCACCACACTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR CAA 90 bp TGGGTTGGGGAGGGGGCAGTAGTCACAGAATGGGACTGTGGTGGGTaGCCATGGTTACGCCTCATCATGGACTCAACAGTGCATCCCACC +
Preference number: 2 (lower is better)
Translates to: WVGEGAVVTEWDCGG*PWLRLIMDSTVHPT
Trigger: GGTGGGATGCACTGTTGAGTCCATGATGAGGCGTAACCATGGCAACCCACCACAGTCCCATTCTGTGACTACTGCCCCCTCCCCAACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR-3UTR TCA 90 bp GTTGGGGAGGGGGCAGTAGTCACAGAATGGGACTGTGGTGGGTTGCCATGGTTACTCACTGTGTCCTGGTaGCAGACACACACAGGCTCC +
Preference number: 2 (lower is better)
Translates to: VGEGAVVTEWDCGGLPWLLTVSW*QTHTGS
Trigger: GGAGCCTGTGTGTGTCTGTCACCAGGACACAGTGAG...TAACCATGGCAACCCACCACAGTCCCATTCTGTGACTACTGCCCCCTCCCCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR-3UTR GCA 90 bp GTTGGGGAGGGGGCAGTAGTCACAGAATGGGACTGTGGTGGGTTGCCATGGTTACTGTGGTTGCCAGGTTaGCCTCCAAAGCCACTGGTG +
Preference number: 2 (lower is better)
Translates to: VGEGAVVTEWDCGGLPWLLWLPG*PPKPLV
Trigger: CACCAGTGGCTTTGGAGGGCAACCTGGCAACCACAG...TAACCATGGCAACCCACCACAGTCCCATTCTGTGACTACTGCCCCCTCCCCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR-3UTR GCA 90 bp CTCGTCTTGAACGTGCAGCATTATATTGCAATCTGTGCAGTAGCTAAGGAGCAAGGGCTCACCCAGCTCTaGCAGCGGGCGGAGAGGGCG +
Preference number: 2 (lower is better)
Translates to: LVLNVQHYIAICAVAKEQGLTQL*QRAERA
Trigger: CGCCCTCTCCGCCCGCTGGCAGAGCTGGGTGAGCCC...TTGCTCCTTAGCTACTGCACAGATTGCAATATAATGCTGCACGTTCAAGACGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR-3UTR CCA 90 bp CCTCCAGCCTTTCTCTGGCCAGCGAGGGGAAGAAAGGTCAGCCCACCGAACAAGAGCCAGAGAATGAGATaGGACGGATGCTTCGGAAGA +
Preference number: 2 (lower is better)
Translates to: PPAFLWPARGRKVSPPNKSQRMR*DGCFGR
Trigger: TCTTCCGAAGCATCCGTCCCATCTCATTCTCTGGCT...CTTGTTCGGTGGGCTGACCTTTCTTCCCCTCGCTGGCCAGAGAAAGGCTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR-3UTR GCA 90 bp GTTGGGGAGGGGGCAGTAGTCACAGAATGGGACTGTGGTGGGTTGCCATGGTTAGATGTCTCCCTACAATaGCTGGAAGCTGGGTTCCCT +
Preference number: 2 (lower is better)
Translates to: VGEGAVVTEWDCGGLPWLDVSLQ*LEAGFP
Trigger: AGGGAACCCAGCTTCCAGGCATTGTAGGGAGACATC...TAACCATGGCAACCCACCACAGTCCCATTCTGTGACTACTGCCCCCTCCCCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR CAA 90 bp TGGGAAATGAGGAGCGAAGGGCTCTCGAGAGAGAGAGCAGACCAGTaGGTTGAGGGTCTTGTGGCTCAGGAAACAGTTGCCATGCCAACT +
Preference number: 2 (lower is better)
Translates to: WEMRSEGLSRERADQ*VEGLVAQETVAMPT
Trigger: AGTTGGCATGGCAACTGTTTCCTGAGCCACAAGACCCTCAACCAACTGGTCTGCTCTCTCTCTCGAGAGCCCTTCGCTCCTCATTTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR-3UTR TCA 90 bp GCCTGGAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGAAACCCAGGTCCCCCACACTGTGTTTGTTCTTaGAACCAGTGGGAACTGATG +
Preference number: 2 (lower is better)
Translates to: AWKLGSLMTLQVGNPGPPHCVCS*NQWELM
Trigger: CATCAGTTCCCACTGGTTTCAAGAACAAACACAGTG...TGGGGGACCTGGGTTTCCCACCTGCAAAGTCATCAGGGAACCCAGCTTCCAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
3UTR-3UTR TCA 90 bp CCTCCAGCCTTTCTCTGGCCAGCGAGGGGAAGAAAGGTCAGCCCACCGAACAAGCCAACGCAAGTAACCTaGTTGCTTTTCCTAACACTG +
Preference number: 2 (lower is better)
Translates to: PPAFLWPARGRKVSPPNKPTQVT*LLFLTL
Trigger: CAGTGTTAGGAAAAGCAATCAGGTTACTTGCGTTGG...CTTGTTCGGTGGGCTGACCTTTCTTCCCCTCGCTGGCCAGAGAAAGGCTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR-3UTR TCA 90 bp GTTGGGGAGGGGGCAGTAGTCACAGAATGGGACTGTGGTGGGTTGCCATGGTTAGCTTGTGAGCAGAGCTaGAGTGTAGTTACAGTGTTG +
Preference number: 2 (lower is better)
Translates to: VGEGAVVTEWDCGGLPWLACEQS*SVVTVL
Trigger: CAACACTGTAACTACACTTCAGCTCTGCTCACAAGC...TAACCATGGCAACCCACCACAGTCCCATTCTGTGACTACTGCCCCCTCCCCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR-3UTR GCA 90 bp ATGTCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGAACCCAGACACTCCCTTaGAGGATACTTCCCACTGTG +
Preference number: 2 (lower is better)
Translates to: MSPYNAWKLGSLMTLQVGTQTLP*RILPTV
Trigger: CACAGTGGGAAGTATCCTGCAAGGGAGTGTCTGGGT...TCCCACCTGCAAAGTCATCAGGGAACCCAGCTTCCAGGCATTGTAGGGAGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
3UTR CAA 90 bp CCACATGGTAGTACCCTTAGCCCAAGTTTTGGTGTCTGTTTCCGCTaGGCCTGTGGGGAGGCAATGAATGGAAATTGGAGGGTCTGGGAA +
Preference number: 2 (lower is better)
Translates to: PHGSTLSPSFGVCFR*ACGEAMNGNWRVWE
Trigger: TTCCCAGACCCTCCAATTTCCATTCATTGCCTCCCCACAGGCCAAGCGGAAACAGACACCAAAACTTGGGCTAAGGGTACTACCATGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR-3UTR CCA 90 bp GAGGTGTGGAAGGTTCTGCAGGGTTCCTTGCAAGGGAGAAAGGACGCTGCCACTACTGTGAATGGAGACTaGATAGCCAACATGTATGTG +
Preference number: 2 (lower is better)
Translates to: EVWKVLQGSLQGRKDAATTVNGD*IANMYV
Trigger: CACATACATGTTGGCTATCCAGTCTCCATTCACAGT...AGTGGCAGCGTCCTTTCTCCCTTGCAAGGAACCCTGCAGAACCTTCCACACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR-3UTR CCA 90 bp CTCGTCTTGAACGTGCAGCATTATATTGCAATCTGTGCAGTAGCTAAGGAGCAAGGTAAGTGGTATCCCTaGCCTTCCCCCACCCCAGTC +
Preference number: 2 (lower is better)
Translates to: LVLNVQHYIAICAVAKEQGKWYP*PSPTPV
Trigger: GACTGGGGTGGGGGAAGGCCAGGGATACCACTTACC...TTGCTCCTTAGCTACTGCACAGATTGCAATATAATGCTGCACGTTCAAGACGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR CAA 90 bp TCCTTGAAATTGTACAACCCTACTCCAGAGCAGTCCAAAGTGCTGTaGCTGAACACATCTGTGTTCCACACACACACACCAGCCCCATCC +
Preference number: 2 (lower is better)
Translates to: SLKLYNPTPEQSKVL*LNTSVFHTHTPAPS
Trigger: GGATGGGGCTGGTGTGTGTGTGTGGAACACAGATGTGTTCAGCAACAGCACTTTGGACTGCTCTGGAGTAGGGTTGTACAATTTCAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR-3UTR TCA 90 bp ATGTCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGACACTGTGTTTGTTCTTaGAACCAGTGGGAACTGATG +
Preference number: 2 (lower is better)
Translates to: MSPYNAWKLGSLMTLQVGHCVCS*NQWELM
Trigger: CATCAGTTCCCACTGGTTTCAAGAACAAACACAGTG...TCCCACCTGCAAAGTCATCAGGGAACCCAGCTTCCAGGCATTGTAGGGAGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
3UTR CAA 90 bp AGGAGCAATCCACACTGTGCGGGGAGATCCAAACATTCCTTGAAATaGTACAACCCTACTCCAGAGCAGTCCAAAGTGCTGTTGCTGAAC +
Preference number: 2 (lower is better)
Translates to: RSNPHCAGRSKHSLK*YNPTPEQSKVLLLN
Trigger: GTTCAGCAACAGCACTTTGGACTGCTCTGGAGTAGGGTTGTACAATTTCAAGGAATGTTTGGATCTCCCCGCACAGTGTGGATTGCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR CAA 90 bp AGAGAGCAGACCAGTTGGTTGAGGGTCTTGTGGCTCAGGAAACAGTaGCCATGCCAACTCAACTTACAAAGTCTGGCTTTCTATCCCAAG +
Preference number: 2 (lower is better)
Translates to: REQTSWLRVLWLRKQ*PCQLNLQSLAFYPK
Trigger: CTTGGGATAGAAAGCCAGACTTTGTAAGTTGAGTTGGCATGGCAACTGTTTCCTGAGCCACAAGACCCTCAACCAACTGGTCTGCTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR-3UTR TCA 90 bp TCCATAGTCATGAACAGTACTAGACCTAAAATACAGAAAAGATGCTGCCGGCACCCATGGACATGGTTCTaGCCATCCTCCACCCACCAG +
Preference number: 2 (lower is better)
Translates to: SIVMNSTRPKIQKRCCRHPWTWF*PSSTHQ
Trigger: CTGGTGGGTGGAGGATGGTCAGAACCATGTCCATGG...GTGCCGGCAGCATCTTTTCTGTATTTTAGGTCTAGTACTGTTCATGACTATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR-3UTR TCA 90 bp GAGGACATGCGTGGATGGAGTCTCCAAGTGATCTGTAGTGGAAGACTTAACTCCTGTGTTCTTCCTGTTTaGAGAGAAAGCTGTCCCAAG +
Preference number: 2 (lower is better)
Translates to: EDMRGWSLQVICSGRLNSCVLPV*RESCPK
Trigger: CTTGGGACAGCTTTCTCTTCAAACAGGAAGAACACA...GGAGTTAAGTCTTCCACTACAGATCACTTGGAGACTCCATCCACGCATGTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR-3UTR CCA 90 bp GACCATCCTCCACCCACCAGCTCCTCAACAGACCCTTGCAGACAATGCAAACGCTACAGTACAGTAATCTaGATACAGACAGTAAAAGGA +
Preference number: 2 (lower is better)
Translates to: DHPPPTSSSTDPCRQCKRYSTVI*IQTVKG
Trigger: TCCTTTTACTGTCTGTATCCAGATTACTGTACTGTA...GCGTTTGCATTGTCTGCAAGGGTCTGTTGAGGAGCTGGTGGGTGGAGGATGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
3UTR CAA 90 bp AACAGAAAACATACAAGGTTGGGGTTCAGAGTTAAGGACGTTCTGTaGCCACCACCACAAACATCAGGCCATCCCAAACTGAGTTGGATG +
Preference number: 2 (lower is better)
Translates to: NRKHTRLGFRVKDVL*PPPQTSGHPKLSWM
Trigger: CATCCAACTCAGTTTGGGATGGCCTGATGTTTGTGGTGGTGGCAACAGAACGTCCTTAACTCTGAACCCCAACCTTGTATGTTTTCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR-3UTR CCA 90 bp CTACAATGCCTGGAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGAAACCCAGGTACAGTACAGTAATCTaGATACAGACAGTAAAAGGA +
Preference number: 2 (lower is better)
Translates to: LQCLEAGFPDDFAGGKPRYSTVI*IQTVKG
Trigger: TCCTTTTACTGTCTGTATCCAGATTACTGTACTGTA...CCTGGGTTTCCCACCTGCAAAGTCATCAGGGAACCCAGCTTCCAGGCATTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
3UTR CAA 90 bp CCTTGCAGACAATGCAAACGCACCAGTCTCCTGCGACACACCTGTTaGACTCTAATGACAAGGTTAGAATACAAACCTAAAGAGGATGTA +
Preference number: 2 (lower is better)
Translates to: PCRQCKRTSLLRHTC*TLMTRLEYKPKEDV
Trigger: TACATCCTCTTTAGGTTTGTATTCTAACCTTGTCATTAGAGTCAAACAGGTGTGTCGCAGGAGACTGGTGCGTTTGCATTGTCTGCAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
3UTR CAA 90 bp AAAGTGACAAGTGCCTGCCGTCAGGTAGTACTCGGTAGTCATATATaGTCACGGGCTAGTTCGTACTTCACATTCATCCTTTTAAACCAG +
Preference number: 2 (lower is better)
Translates to: KVTSACRQVVLGSHI*SRASSYFTFILLNQ
Trigger: CTGGTTTAAAAGGATGAATGTGAAGTACGAACTAGCCCGTGACAATATATGACTACCGAGTACTACCTGACGGCAGGCACTTGTCACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR-3UTR CCA 90 bp ACTAGTTTCCCATCTGCCTGTCTGATGTCTCCCTACAATGCCTGGAAGCTGGGTTACAGTACAGTAATCTaGATACAGACAGTAAAAGGA +
Preference number: 2 (lower is better)
Translates to: TSFPSACLMSPYNAWKLGYSTVI*IQTVKG
Trigger: TCCTTTTACTGTCTGTATCCAGATTACTGTACTGTA...ACCCAGCTTCCAGGCATTGTAGGGAGACATCAGACAGGCAGATGGGAAACTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
3UTR CAA 90 bp GACCAAGATGCTTGGTTAAGAAGCCTGCACAGCATTTTTAGCTGTTaGCGAGATAAAGTAACAGAGGAGCATCTTCCAGATCTAACTCCT +
Preference number: 2 (lower is better)
Translates to: DQDAWLRSLHSIFSC*RDKVTEEHLPDLTP
Trigger: AGGAGTTAGATCTGGAAGATGCTCCTCTGTTACTTTATCTCGCAAACAGCTAAAAATGCTGTGCAGGCTTCTTAACCAAGCATCTTGGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR-3UTR CCA 90 bp AGAGTCGAAAGTGAGATACAGTACTTGTTGAATGACAGACCAAGATGCTTGGTTTTGCATTTTCCTTCTTaGAAGCCAACGCAAGTAACC +
Preference number: 2 (lower is better)
Translates to: RVESEIQYLLNDRPRCLVLHFPS*KPTQVT
Trigger: GGTTACTTGCGTTGGCTTCCAAGAAGGAAAATGCAA...AACCAAGCATCTTGGTCTGTCATTCAACAAGTACTGTATCTCACTTTCGACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR-3UTR CCA 90 bp AAACTGAGTTGGATGAATCGAGAAAAGCAAAATGTGACCAACATAGACGATTATACAGACCAAGATGCTTaGTTAAGAAGCCTGCACAGC +
Preference number: 2 (lower is better)
Translates to: KLSWMNREKQNVTNIDDYTDQDA*LRSLHS
Trigger: GCTGTGCAGGCTTCTTAACCAAGCATCTTGGTCTGT...ATAATCGTCTATGTTGGTCACATTTTGCTTTTCTCGATTCATCCAACTCAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR GCA 72 bp GGGTGCTCCCTCCGTCCCTCCCGCCCCACTGCTACCTaGCTGACCAGGAGTGACCTGAGCAAGGACTTTCCC +
Preference number: 3 (lower is better)
Translates to: GCSLRPSRPTAT*LTRSDLSKDFP
Trigger: GGGAAAGTCCTTGCTCAGGTCACTCCTGGTCAGGCAGGTAGCAGTGGGGCGGGAGGGACGGAGGGAGCACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR TCA 72 bp TCCCTCCCGCCCCACTGCTACCTGCCTGACCAGGAGTaGCCTGAGCAAGGACTTTCCCTGCCCACCATGACG +
Preference number: 3 (lower is better)
Translates to: SLPPHCYLPDQE*PEQGLSLPTMT
Trigger: CGTCATGGTGGGCAGGGAAAGTCCTTGCTCAGGTCACTCCTGGTCAGGCAGGTAGCAGTGGGGCGGGAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR TCA 72 bp GGCTCACCCAGCTCTGCCAGCGGGCGGAGAGGGCGATaGAGTTTAGGGAGAGGCCAGCTATTCCGGACCTAC +
Preference number: 3 (lower is better)
Translates to: GSPSSASGRRGR*SLGRGQLFRTY
Trigger: GTAGGTCCGGAATAGCTGGCCTCTCCCTAAACTTCATCGCCCTCTCCGCCCGCTGGCAGAGCTGGGTGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR TCA 72 bp ATGAGGGCACTGCTATTACCGTGCTCCCTACACAGTTaGCCAAAGGTGCTCCGGGAGCCTGGAGGACCCCAC +
Preference number: 3 (lower is better)
Translates to: MRALLLPCSLHS*PKVLREPGGPH
Trigger: GTGGGGTCCTCCAGGCTCCCGGAGCACCTTTGGTCAACTGTGTAGGGAGCACGGTAATAGCAGTGCCCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR GCA 72 bp TTGCTTTTCCTAACACTGCACAGAAACCAGTGTGGGTaGTCCCTCCGTCCCTCCCGCCCCACTGCTACCTGC +
Preference number: 3 (lower is better)
Translates to: LLFLTLHRNQCG*SLRPSRPTATC
Trigger: GCAGGTAGCAGTGGGGCGGGAGGGACGGAGGGAGCACCCACACTGGTTTCTGTGCAGTGTTAGGAAAAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR-3UTR CAA 90 bp GAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGAAACCCAGGTCCCCCAACCCCCTCCTCAACAGACCCTaGCAGACAATGCAAACGCAC +
Preference number: 3 (lower is better)
Translates to: EAGFPDDFAGGKPRSPNPLLNRP*QTMQTH
Trigger: GTGCGTTTGCATTGTCTGCAAGGGTCTGTTGAGGAG...GGGGTTGGGGGACCTGGGTTTCCCACCTGCAAAGTCATCAGGGAACCCAGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
3UTR TCA 72 bp ACTGGAGGCCCTGTATTCCCCTGGAGTCAAAGGGGGTaGCTGGGAAATGAGGAGCGAAGGGCTCTCGAGAGA +
Preference number: 3 (lower is better)
Translates to: TGGPVFPWSQRG*LGNEERRALER
Trigger: TCTCTCGAGAGCCCTTCGCTCCTCATTTCCCAGTCACCCCCTTTGACTCCAGGGGAATACAGGGCCTCCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR GCA 72 bp AACCAGTGGGAACTGATGCCCCTCGACTCTGCACACTaGCGGAGAAGGCAGGGGCTGATGAAGCCACATTCA +
Preference number: 3 (lower is better)
Translates to: NQWELMPLDSAH*RRRQGLMKPHS
Trigger: TGAATGTGGCTTCATCAGCCCCTGCCTTCTCCGGCAGTGTGCAGAGTCGAGGGGCATCAGTTCCCACTGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
3UTR GCA 72 bp TTCTTGAAACCAGTGGGAACTGATGCCCCTCGACTCTaGACACTGCCGGAGAAGGCAGGGGCTGATGAAGCC +
Preference number: 3 (lower is better)
Translates to: FLKPVGTDAPRL*TLPEKAGADEA
Trigger: GGCTTCATCAGCCCCTGCCTTCTCCGGCAGTGTGCAGAGTCGAGGGGCATCAGTTCCCACTGGTTTCAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
3UTR GCA 72 bp CCAGCCCCATCCCTGAGTAAGAGGTGTGGAAGGTTCTaGAGGGTTCCTTGCAAGGGAGAAAGGACGCTGCCA +
Preference number: 3 (lower is better)
Translates to: PAPSLSKRCGRF*RVPCKGERTLP
Trigger: TGGCAGCGTCCTTTCTCCCTTGCAAGGAACCCTGCAGAACCTTCCACACCTCTTACTCAGGGATGGGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR CCA 72 bp CTGATTGCTTTTCCTAACACTGCACAGAAACCAGTGTaGGTGCTCCCTCCGTCCCTCCCGCCCCACTGCTAC +
Preference number: 3 (lower is better)
Translates to: LIAFPNTAQKPV*VLPPSLPPHCY
Trigger: GTAGCAGTGGGGCGGGAGGGACGGAGGGAGCACCCACACTGGTTTCTGTGCAGTGTTAGGAAAAGCAATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR CCA 72 bp GAGGCCCTGTATTCCCCTGGAGTCAAAGGGGGTGACTaGGAAATGAGGAGCGAAGGGCTCTCGAGAGAGAGA +
Preference number: 3 (lower is better)
Translates to: EALYSPGVKGGD*EMRSEGLSRER
Trigger: TCTCTCTCTCGAGAGCCCTTCGCTCCTCATTTCCCAGTCACCCCCTTTGACTCCAGGGGAATACAGGGCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR CCA 72 bp GGTTGGGGAGGGGGCAGTAGTCACAGAATGGGACTGTaGTGGGTTGCCATGGTTACGCCTCATCATGGACTC +
Preference number: 3 (lower is better)
Translates to: GWGGGSSHRMGL*WVAMVTPHHGL
Trigger: GAGTCCATGATGAGGCGTAACCATGGCAACCCACCACAGTCCCATTCTGTGACTACTGCCCCCTCCCCAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR CCA 72 bp CTGACACTACCTGGGTCACACTTGAGCAGTGTGGGTTaGGGAGGGGGCAGTAGTCACAGAATGGGACTGTGG +
Preference number: 3 (lower is better)
Translates to: LTLPGSHLSSVG*GGGSSHRMGLW
Trigger: CCACAGTCCCATTCTGTGACTACTGCCCCCTCCCCAACCCACACTGCTCAAGTGTGACCCAGGTAGTGTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR TCA 72 bp GACAGGTACAGAGGCGCGTGGCTGATCCTTGTCCGATaGGGGCACTGCTATTACCGTGCTCCCTACACAGTT +
Preference number: 3 (lower is better)
Translates to: DRYRGAWLILVR*GHCYYRAPYTV
Trigger: AACTGTGTAGGGAGCACGGTAATAGCAGTGCCCTCATCGGACAAGGATCAGCCACGCGCCTCTGTACCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR GCA 72 bp AAGAGAAAGCTGTCCCAAGGGAATGGTGACTGTGGTTaGCAGGTTGCCCTCCAAAGCCACTGGTGGGCATGC +
Preference number: 3 (lower is better)
Translates to: KRKLSQGNGDCG*QVALQSHWWAC
Trigger: GCATGCCCACCAGTGGCTTTGGAGGGCAACCTGGCAACCACAGTCACCATTCCCTTGGGACAGCTTTCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR CCA 72 bp TCCTTGCAAGGGAGAAAGGACGCTGCCACTTCCTTATaGGGTAAGGGGGTGGGGAGGAACCCAACAAGCTCA +
Preference number: 3 (lower is better)
Translates to: SLQGRKDAATSL*GKGVGRNPTSS
Trigger: TGAGCTTGTTGGGTTCCTCCCCACCCCCTTACCCCATAAGGAAGTGGCAGCGTCCTTTCTCCCTTGCAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR CCA 72 bp GGGACTGTGGTGGGTTGCCATGGTTACGCCTCATCATaGACTCAACAGTGCATCCCACCCTTGGACTGGAGA +
Preference number: 3 (lower is better)
Translates to: GTVVGCHGYASS*TQQCIPPLDWR
Trigger: TCTCCAGTCCAAGGGTGGGATGCACTGTTGAGTCCATGATGAGGCGTAACCATGGCAACCCACCACAGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR CCA 72 bp TTAAAGGTAGGGTCTGTTTACTGCCCCCACGCTGTCTaGTTTGCACCACCCAGCGCAACTGCTGAGCTGGAA +
Preference number: 3 (lower is better)
Translates to: LKVGSVYCPHAV*FAPPSATAELE
Trigger: TTCCAGCTCAGCAGTTGCGCTGGGTGGTGCAAACCAGACAGCGTGGGGGCAGTAAACAGACCCTACCTTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR CCA 72 bp GGAGGGTCTGGGAACCTGATGTTAAAACCCTTCAACTaGTGCAGATCTCAGGTTCCGGAGGGCCAAGACTCC +
Preference number: 3 (lower is better)
Translates to: GGSGNLMLKPFN*CRSQVPEGQDS
Trigger: GGAGTCTTGGCCCTCCGGAACCTGAGATCTGCACCAGTTGAAGGGTTTTAACATCAGGTTCCCAGACCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR-3UTR CAA 90 bp AGAGAAAGAGACACCCTCACTCGCACTCCTTCACAAGGGACACGCACCCAGACACTCCTCAACAGACCCTaGCAGACAATGCAAACGCAC +
Preference number: 3 (lower is better)
Translates to: RERDTLTRTPSQGTRTQTLLNRP*QTMQTH
Trigger: GTGCGTTTGCATTGTCTGCAAGGGTCTGTTGAGGAG...TGTCTGGGTGCGTGTCCCTTGTGAAGGAGTGCGAGTGAGGGTGTCTCTTTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
3UTR-3UTR CAA 90 bp GCCTGGAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGAAACCCAGGTCCCCCACCACTGTGTTTGTTCTaGAAACCAGTGGGAACTGAT +
Preference number: 3 (lower is better)
Translates to: AWKLGSLMTLQVGNPGPPPLCLF*KPVGTD
Trigger: ATCAGTTCCCACTGGTTTCAAGAACAAACACAGTGG...TGGGGGACCTGGGTTTCCCACCTGCAAAGTCATCAGGGAACCCAGCTTCCAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
3UTR-3UTR CAA 90 bp GTTGGGGAGGGGGCAGTAGTCACAGAATGGGACTGTGGTGGGTTGCCATGGTTACAACATGTATGTGGGTaGCCAGGGGAGGGTCTTTTT +
Preference number: 3 (lower is better)
Translates to: VGEGAVVTEWDCGGLPWLQHVCG*PGEGLF
Trigger: AAAAAGACCCTCCCCTGGCAACCCACATACATGTTG...TAACCATGGCAACCCACCACAGTCCCATTCTGTGACTACTGCCCCCTCCCCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR TCA 72 bp CATCTGTGTTCCACACACACACACCAGCCCCATCCCTaGGTAAGAGGTGTGGAAGGTTCTGCAGGGTTCCTT +
Preference number: 3 (lower is better)
Translates to: HLCSTHTHQPHP*VRGVEGSAGFL
Trigger: AAGGAACCCTGCAGAACCTTCCACACCTCTTACTCAGGGATGGGGCTGGTGTGTGTGTGTGGAACACAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR CCA 72 bp GCAGTAGTCACAGAATGGGACTGTGGTGGGTTGCCATaGTTACGCCTCATCATGGACTCAACAGTGCATCCC +
Preference number: 3 (lower is better)
Translates to: AVVTEWDCGGLP*LRLIMDSTVHP
Trigger: GGGATGCACTGTTGAGTCCATGATGAGGCGTAACCATGGCAACCCACCACAGTCCCATTCTGTGACTACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR-3UTR CAA 90 bp GAGGTGTGGAAGGTTCTGCAGGGTTCCTTGCAAGGGAGAAAGGACGCTGCCACTTTGGCACACAAAGTATaGCACATGCTAAGGGAGCCA +
Preference number: 3 (lower is better)
Translates to: EVWKVLQGSLQGRKDAATLAHKV*HMLREP
Trigger: TGGCTCCCTTAGCATGTGCAATACTTTGTGTGCCAA...AGTGGCAGCGTCCTTTCTCCCTTGCAAGGAACCCTGCAGAACCTTCCACACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR-3UTR CAA 90 bp GTTGGGGAGGGGGCAGTAGTCACAGAATGGGACTGTGGTGGGTTGCCATGGTTATGGCTCAGGAAACAGTaGCCATGCCAACTCAACTTA +
Preference number: 3 (lower is better)
Translates to: VGEGAVVTEWDCGGLPWLWLRKQ*PCQLNL
Trigger: TAAGTTGAGTTGGCATGGCAACTGTTTCCTGAGCCA...TAACCATGGCAACCCACCACAGTCCCATTCTGTGACTACTGCCCCCTCCCCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR TCA 72 bp AATATTGCAAAGAGGACAGGTACAGAGGCGCGTGGCTaGTCCTTGTCCGATGAGGGCACTGCTATTACCGTG +
Preference number: 3 (lower is better)
Translates to: NIAKRTGTEARG*SLSDEGTAITV
Trigger: CACGGTAATAGCAGTGCCCTCATCGGACAAGGATCAGCCACGCGCCTCTGTACCTGTCCTCTTTGCAATATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR TCA 72 bp ACAACCCTACTCCAGAGCAGTCCAAAGTGCTGTTGCTaGACACATCTGTGTTCCACACACACACACCAGCCC +
Preference number: 3 (lower is better)
Translates to: TTLLQSSPKCCC*THLCSTHTHQP
Trigger: GGGCTGGTGTGTGTGTGTGGAACACAGATGTGTTCAGCAACAGCACTTTGGACTGCTCTGGAGTAGGGTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR-3UTR CAA 90 bp CCTCCAGCCTTTCTCTGGCCAGCGAGGGGAAGAAAGGTCAGCCCACCGAACAAGACCATTTCTGGAGTTTaGTACCAAACATTAGATCCT +
Preference number: 3 (lower is better)
Translates to: PPAFLWPARGRKVSPPNKTISGV*YQTLDP
Trigger: AGGATCTAATGTTTGGTACAAAACTCCAGAAATGGT...CTTGTTCGGTGGGCTGACCTTTCTTCCCCTCGCTGGCCAGAGAAAGGCTGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR TCA 72 bp CCACGTTCTTTGAAACTAGTTTCCCATCTGCCTGTCTaGTGTCTCCCTACAATGCCTGGAAGCTGGGTTCCC +
Preference number: 3 (lower is better)
Translates to: PRSLKLVSHLPV*CLPTMPGSWVP
Trigger: GGGAACCCAGCTTCCAGGCATTGTAGGGAGACATCAGACAGGCAGATGGGAAACTAGTTTCAAAGAACGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
3UTR GCA 72 bp ATGAACAGTACTAGACCTAAAATACAGAAAAGATGCTaGCGGCACAGCTGGGAGAAGCTGGCTCTCGCGGGA +
Preference number: 3 (lower is better)
Translates to: MNSTRPKIQKRC*RHSWEKLALAG
Trigger: TCCCGCGAGAGCCAGCTTCTCCCAGCTGTGCCGGCAGCATCTTTTCTGTATTTTAGGTCTAGTACTGTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR CCA 72 bp GGAAACAGTTGCCATGCCAACTCAACTTACAAAGTCTaGCTTTCTATCCCAAGAGCTCTGCCTCCTCACCCG +
Preference number: 3 (lower is better)
Translates to: GNSCHANSTYKV*LSIPRALPPHP
Trigger: CGGGTGAGGAGGCAGAGCTCTTGGGATAGAAAGCCAGACTTTGTAAGTTGAGTTGGCATGGCAACTGTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR CCA 72 bp CGAGAGAGAGAGCAGACCAGTTGGTTGAGGGTCTTGTaGCTCAGGAAACAGTTGCCATGCCAACTCAACTTA +
Preference number: 3 (lower is better)
Translates to: REREQTSWLRVL*LRKQLPCQLNL
Trigger: TAAGTTGAGTTGGCATGGCAACTGTTTCCTGAGCCACAAGACCCTCAACCAACTGGTCTGCTCTCTCTCTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR CCA 72 bp GCCTGTGGGGAGGCAATGAATGGAAATTGGAGGGTCTaGGAACCTGATGTTAAAACCCTTCAACTGGTGCAG +
Preference number: 3 (lower is better)
Translates to: ACGEAMNGNWRV*EPDVKTLQLVQ
Trigger: CTGCACCAGTTGAAGGGTTTTAACATCAGGTTCCCAGACCCTCCAATTTCCATTCATTGCCTCCCCACAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR-3UTR CAA 90 bp CTTGCAGGATACTTCCCACTGTGTTTGTTCTTGAAACCAGTGGGAACTGATGCCCTCCTCAACAGACCCTaGCAGACAATGCAAACGCAC +
Preference number: 3 (lower is better)
Translates to: LAGYFPLCLFLKPVGTDALLNRP*QTMQTH
Trigger: GTGCGTTTGCATTGTCTGCAAGGGTCTGTTGAGGAG...GGCATCAGTTCCCACTGGTTTCAAGAACAAACACAGTGGGAAGTATCCTGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
3UTR TCA 72 bp GAAGTTCCTGTATGCACGTGTCAGGATGTGAAAAGCTaGCCCGATGTCTCGCTTCTGCCTTTGTCAAGGTCA +
Preference number: 3 (lower is better)
Translates to: EVPVCTCQDVKS*PDVSLLPLSRS
Trigger: TGACCTTGACAAAGGCAGAAGCGAGACATCGGGTCAGCTTTTCACATCCTGACACGTGCATACAGGAACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR CCA 72 bp TCATTAGTCCCAACAAAAGCCACTGTGAATGGAGACTaGATAGCCAACATGTATGTGGGTTGCCAGGGGAGG +
Preference number: 3 (lower is better)
Translates to: SLVPTKATVNGD*IANMYVGCQGR
Trigger: CCTCCCCTGGCAACCCACATACATGTTGGCTATCCAGTCTCCATTCACAGTGGCTTTTGTTGGGACTAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR CCA 72 bp TTCCGCTTGGCCTGTGGGGAGGCAATGAATGGAAATTaGAGGGTCTGGGAACCTGATGTTAAAACCCTTCAA +
Preference number: 3 (lower is better)
Translates to: FRLACGEAMNGN*RVWEPDVKTLQ
Trigger: TTGAAGGGTTTTAACATCAGGTTCCCAGACCCTCCAATTTCCATTCATTGCCTCCCCACAGGCCAAGCGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR-3UTR CAA 90 bp TGCCTGTCTGATGTCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGATGACTTTTACTTCCCACTGTGTTaGTTCTTGAAACCAGTGGGA +
Preference number: 3 (lower is better)
Translates to: CLSDVSLQCLEAGFPDDFYFPLC*FLKPVG
Trigger: TCCCACTGGTTTCAAGAACAAACACAGTGGGAAGTA...AAAGTCATCAGGGAACCCAGCTTCCAGGCATTGTAGGGAGACATCAGACAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
3UTR-3UTR CAA 90 bp GTTGGGGAGGGGGCAGTAGTCACAGAATGGGACTGTGGTGGGTTGCCATGGTTAGGACAGTATATTATCTaGGTAAGGGTTACTGTAAAC +
Preference number: 3 (lower is better)
Translates to: VGEGAVVTEWDCGGLPWLGQYII*VRVTVN
Trigger: GTTTACAGTAACCCTTACCAAGATAATATACTGTCC...TAACCATGGCAACCCACCACAGTCCCATTCTGTGACTACTGCCCCCTCCCCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR TCA 72 bp GCAATCCACACTGTGCGGGGAGATCCAAACATTCCTTaGAATTGTACAACCCTACTCCAGAGCAGTCCAAAG +
Preference number: 3 (lower is better)
Translates to: AIHTVRGDPNIP*NCTTLLQSSPK
Trigger: CTTTGGACTGCTCTGGAGTAGGGTTGTACAATTTCAAGGAATGTTTGGATCTCCCCGCACAGTGTGGATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR TCA 72 bp ATACAGGTGAAGTTCCTGTATGCACGTGTCAGGATGTaGAAAGCTGACCCGATGTCTCGCTTCTGCCTTTGT +
Preference number: 3 (lower is better)
Translates to: IQVKFLYARVRM*KADPMSRFCLC
Trigger: ACAAAGGCAGAAGCGAGACATCGGGTCAGCTTTTCACATCCTGACACGTGCATACAGGAACTTCACCTGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR CCA 72 bp ACCCAACAAGCTCACCTAACAGAAAACATACAAGGTTaGGGTTCAGAGTTAAGGACGTTCTGTTGCCACCAC +
Preference number: 3 (lower is better)
Translates to: TQQAHLTENIQG*GSELRTFCCHH
Trigger: GTGGTGGCAACAGAACGTCCTTAACTCTGAACCCCAACCTTGTATGTTTTCTGTTAGGTGAGCTTGTTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR-3UTR CAA 90 bp GAGGACATGCGTGGATGGAGTCTCCAAGTGATCTGTAGTGGAAGACTTAACTCCCTAGTCCTCTCACCATaGGAGGTTAAAACAAAACAA +
Preference number: 3 (lower is better)
Translates to: EDMRGWSLQVICSGRLNSLVLSP*EVKTKQ
Trigger: TTGTTTTGTTTTAACCTCCAATGGTGAGAGGACTAG...GGAGTTAAGTCTTCCACTACAGATCACTTGGAGACTCCATCCACGCATGTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR-3UTR CAA 90 bp GAGGACATGCGTGGATGGAGTCTCCAAGTGATCTGTAGTGGAAGACTTAACTCCCAAAATATGATTCTCTaGCCGTTCATCTCAACCACT +
Preference number: 3 (lower is better)
Translates to: EDMRGWSLQVICSGRLNSQNMIL*PFISTT
Trigger: AGTGGTTGAGATGAACGGCAAGAGAATCATATTTTG...GGAGTTAAGTCTTCCACTACAGATCACTTGGAGACTCCATCCACGCATGTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR TCA 72 bp CTGAGAAACCGTTCTGCATTTCGTCTGGCCTCTACTTaGGAAACATCAAAACAAAAGCCAGGCATTCAAGCC +
Preference number: 3 (lower is better)
Translates to: LRNRSAFRLAST*ETSKQKPGIQA
Trigger: GGCTTGAATGCCTGGCTTTTGTTTTGATGTTTCTCAAGTAGAGGCCAGACGAAATGCAGAACGGTTTCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR GCA 72 bp AAAGCCACTGGTGGGCATGCTCAGAACACACACATATaGAATAAGTTGCTTGTGTCAAAGGCAGGGATCAAA +
Preference number: 3 (lower is better)
Translates to: KATGGHAQNTHI*NKLLVSKAGIK
Trigger: TTTGATCCCTGCCTTTGACACAAGCAACTTATTGCATATGTGTGTGTTCTGAGCATGCCCACCAGTGGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR GCA 72 bp GCAATCTGTGCAGTAGCTAAGGAGCAATCCACACTGTaGGGGGAGATCCAAACATTCCTTGAAATTGTACAA +
Preference number: 3 (lower is better)
Translates to: AICAVAKEQSTL*GEIQTFLEIVQ
Trigger: TTGTACAATTTCAAGGAATGTTTGGATCTCCCCGCACAGTGTGGATTGCTCCTTAGCTACTGCACAGATTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR GCA 72 bp CAGCTCCAGAGTAGAGGTGTGCAAACTGTTTCGAGTTaGCTTAGGAACAGAAATACAACACTGTTCATGGAC +
Preference number: 3 (lower is better)
Translates to: QLQSRGVQTVSS*LRNRNTTLFMD
Trigger: GTCCATGAACAGTGTTGTATTTCTGTTCCTAAGGCAACTCGAAACAGTTTGCACACCTCTACTCTGGAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR CCA 72 bp GAGAGGCCAGCTATTCCGGACCTACTCAAAGGTGTTTaGTACATCCCAGAAAATGGTCTGGAAAAAGATCAT +
Preference number: 3 (lower is better)
Translates to: ERPAIPDLLKGV*YIPENGLEKDH
Trigger: ATGATCTTTTTCCAGACCATTTTCTGGGATGTACCAAACACCTTTGAGTAGGTCCGGAATAGCTGGCCTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR CCA 72 bp CGAGTTGCCTTAGGAACAGAAATACAACACTGTTCATaGACAGGGAGAAAACCAACCCAACTCAACAGGTCA +
Preference number: 3 (lower is better)
Translates to: RVALGTEIQHCS*TGRKPTQLNRS
Trigger: TGACCTGTTGAGTTGGGTTGGTTTTCTCCCTGTCCATGAACAGTGTTGTATTTCTGTTCCTAAGGCAACTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR CCA 72 bp CCACCACCACAAACATCAGGCCATCCCAAACTGAGTTaGATGAATCGAGAAAAGCAAAATGTGACCAACATA +
Preference number: 3 (lower is better)
Translates to: PPPQTSGHPKLS*MNREKQNVTNI
Trigger: TATGTTGGTCACATTTTGCTTTTCTCGATTCATCCAACTCAGTTTGGGATGGCCTGATGTTTGTGGTGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR-3UTR CAA 90 bp TCCATAGTCATGAACAGTACTAGACCTAAAATACAGAAAAGATGCTGCCGGCACCCACTGTGTTTGTTCTaGAAACCAGTGGGAACTGAT +
Preference number: 3 (lower is better)
Translates to: SIVMNSTRPKIQKRCCRHPLCLF*KPVGTD
Trigger: ATCAGTTCCCACTGGTTTCAAGAACAAACACAGTGG...GTGCCGGCAGCATCTTTTCTGTATTTTAGGTCTAGTACTGTTCATGACTATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR CCA 72 bp AAAAAGATCATTAGTCCCAACAAAAGCCACTGTGAATaGAGACTGGATAGCCAACATGTATGTGGGTTGCCA +
Preference number: 3 (lower is better)
Translates to: KKIISPNKSHCE*RLDSQHVCGLP
Trigger: TGGCAACCCACATACATGTTGGCTATCCAGTCTCCATTCACAGTGGCTTTTGTTGGGACTAATGATCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR TCA 72 bp TATCTATTGGCCAAACACACTTCATCTGAATACAGGTaGAGTTCCTGTATGCACGTGTCAGGATGTGAAAAG +
Preference number: 3 (lower is better)
Translates to: YLLAKHTSSEYR*SSCMHVSGCEK
Trigger: CTTTTCACATCCTGACACGTGCATACAGGAACTTCACCTGTATTCAGATGAAGTGTGTTTGGCCAATAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR GCA 72 bp ATCTATGAAAGAAATCCCAGCTCCAGAGTAGAGGTGTaGAAACTGTTTCGAGTTGCCTTAGGAACAGAAATA +
Preference number: 3 (lower is better)
Translates to: IYERNPSSRVEV*KLFRVALGTEI
Trigger: TATTTCTGTTCCTAAGGCAACTCGAAACAGTTTGCACACCTCTACTCTGGAGCTGGGATTTCTTTCATAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR-3UTR CAA 90 bp AAATCGCAAAGTTCTTTAGAAGTTCGTCCTAAAAACACTGGACACAACCGAGTGGAGATACAGTACTTGTaGAATGACAGACCAAGATGC +
Preference number: 3 (lower is better)
Translates to: KSQSSLEVRPKNTGHNRVEIQYL*NDRPRC
Trigger: GCATCTTGGTCTGTCATTCAACAAGTACTGTATCTC...CACTCGGTTGTGTCCAGTGTTTTTAGGACGAACTTCTAAAGAACTTTGCGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR-3UTR CAA 90 bp AAACTGAGTTGGATGAATCGAGAAAAGCAAAATGTGACCAACATAGACGATTATCTAGATAGCACACTATaGGCACACAAAGTATTGCAC +
Preference number: 3 (lower is better)
Translates to: KLSWMNREKQNVTNIDDYLDSTL*AHKVLH
Trigger: GTGCAATACTTTGTGTGCCAATAGTGTGCTATCTAG...ATAATCGTCTATGTTGGTCACATTTTGCTTTTCTCGATTCATCCAACTCAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR GCA 72 bp CAAATACAACATTTTACACTGGAATTACAGAGAGTATaGACGCATATGGAAACGTTCTCCTGTCACGATAAA +
Preference number: 3 (lower is better)
Translates to: QIQHFTLELQRV*THMETFSCHDK
Trigger: TTTATCGTGACAGGAGAACGTTTCCATATGCGTGCATACTCTCTGTAATTCCAGTGTAAAATGTTGTATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
CDS-3UTR GCA 90 bp GATGCCCGGGAGCTCCATGGACATGGTTCTGACCATCCTCCACCCACCAGCTCCGTCCCTGCTGACCCGTaGCGCCCACCCCCATGGCCG +
Preference number: 4 (lower is better)
Translates to: DARELHGHGSDHPPPTSSVPADP*RPPPWP
Trigger: CGGCCATGGGGGTGGGCGGCACGGGTCAGCAGGGAC...GGAGCTGGTGGGTGGAGGATGGTCAGAACCATGTCCATGGAGCTCCCGGGCATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR GCA 90 bp GACCATTCCGCTCCAGAGTTCGTCCTAGGAGCCACTCCGCCTCCTGGCTCCATTCGCGGATGCCAGGGGTaGTGGGGAGCCAGGCCACAC +
Preference number: 4 (lower is better)
Translates to: DHSAPEFVLGATPPPGSIRGCQG*WGARPH
Trigger: GTGTGGCCTGGCTCCCCAGCACCCCTGGCATCCGCG...AATGGAGCCAGGAGGCGGAGTGGCTCCTAGGACGAACTCTGGAGCGGAATGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
CDS-3UTR GCA 90 bp TACCGTGCTCCCTACACAGTTGACCAAAGGTGCTCCGGGAGCCTGGAGGACCCCGGGGACGCCACGGACTaGACCACCGGCAGGTGGATC +
Preference number: 4 (lower is better)
Translates to: YRAPYTVDQRCSGSLEDPGDATD*TTGRWI
Trigger: GATCCACCTGCCGGTGGTGCAGTCCGTGGCGTCCCC...GGGGTCCTCCAGGCTCCCGGAGCACCTTTGGTCAACTGTGTAGGGAGCACGGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
CDS-3UTR CCA 90 bp GATGCCCGGGAGCTCCATGGACATGGTTCTGACCATCCTCCACCCACCAGCTCCGGATGCCAGGGGTGCTaGGGAGCCAGGCCACACCCT +
Preference number: 4 (lower is better)
Translates to: DARELHGHGSDHPPPTSSGCQGC*GARPHP
Trigger: AGGGTGTGGCCTGGCTCCCCAGCACCCCTGGCATCC...GGAGCTGGTGGGTGGAGGATGGTCAGAACCATGTCCATGGAGCTCCCGGGCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR TCA 90 bp GACCATTCCGCTCCAGAGTTCGTCCTAGGAGCCACTCCGCCTCCTGGCTCCATTGGCTGCCCACCGGGATaGGCAGGGGCTGGTTACCTG +
Preference number: 4 (lower is better)
Translates to: DHSAPEFVLGATPPPGSIGCPPG*AGAGYL
Trigger: CAGGTAACCAGCCCCTGCTCATCCCGGTGGGCAGCC...AATGGAGCCAGGAGGCGGAGTGGCTCCTAGGACGAACTCTGGAGCGGAATGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
CDS-3UTR GCA 90 bp GACCATCCTCCACCCACCAGCTCCTCAACAGACCCTTGCAGACAATGCAAACGCGTCCCTGCTGACCCGTaGCGCCCACCCCCATGGCCG +
Preference number: 4 (lower is better)
Translates to: DHPPPTSSSTDPCRQCKRVPADP*RPPPWP
Trigger: CGGCCATGGGGGTGGGCGGCACGGGTCAGCAGGGAC...GCGTTTGCATTGTCTGCAAGGGTCTGTTGAGGAGCTGGTGGGTGGAGGATGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR GCA 90 bp AAGGCAGGGGCTGATGAAGCCACATTCAGGGCCACTAAGGATGCCCGGGAGCTCGGGGACGCCACGGACTaGACCACCGGCAGGTGGATC +
Preference number: 4 (lower is better)
Translates to: KAGADEATFRATKDARELGDATD*TTGRWI
Trigger: GATCCACCTGCCGGTGGTGCAGTCCGTGGCGTCCCC...GAGCTCCCGGGCATCCTTAGTGGCCCTGAATGTGGCTTCATCAGCCCCTGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp AATCTGGATACAGACAGTAAAAGGAGGCCCCGGGCCTCCGCTGCCCGCAAGGTCCGCTGGGCAGAGCAGTaGCCTTCTCCTCCGAGGGCC +
Preference number: 4 (lower is better)
Translates to: NLDTDSKRRPRASAARKVRWAEQ*PSPPRA
Trigger: GGCCCTCGGAGGAGAAGGCCACTGCTCTGCCCAGCG...GACCTTGCGGGCAGCGGAGGCCCGGGGCCTCCTTTTACTGTCTGTATCCAGATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp GAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGAAACCCAGGTCCCCCAACCCCGGATGCCAGGGGTGCTaGGGAGCCAGGCCACACCCT +
Preference number: 4 (lower is better)
Translates to: EAGFPDDFAGGKPRSPNPGCQGC*GARPHP
Trigger: AGGGTGTGGCCTGGCTCCCCAGCACCCCTGGCATCC...GGGGTTGGGGGACCTGGGTTTCCCACCTGCAAAGTCATCAGGGAACCCAGCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp AAGGCAGGGGCTGATGAAGCCACATTCAGGGCCACTAAGGATGCCCGGGAGCTCGGATGCCAGGGGTGCTaGGGAGCCAGGCCACACCCT +
Preference number: 4 (lower is better)
Translates to: KAGADEATFRATKDARELGCQGC*GARPHP
Trigger: AGGGTGTGGCCTGGCTCCCCAGCACCCCTGGCATCC...GAGCTCCCGGGCATCCTTAGTGGCCCTGAATGTGGCTTCATCAGCCCCTGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp GATGCCCGGGAGCTCCATGGACATGGTTCTGACCATCCTCCACCCACCAGCTCCGGCCTGCACCATGGCTaGGTAGGCAGCCTGGGTGAC +
Preference number: 4 (lower is better)
Translates to: DARELHGHGSDHPPPTSSGLHHG*VGSLGD
Trigger: GTCACCCAGGCTGCCTACCCAGCCATGGTGCAGGCC...GGAGCTGGTGGGTGGAGGATGGTCAGAACCATGTCCATGGAGCTCCCGGGCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp GATGCCCGGGAGCTCCATGGACATGGTTCTGACCATCCTCCACCCACCAGCTCCACCGGCAGGTGGATCTaGGCCTGCACCATGGCTGGG +
Preference number: 4 (lower is better)
Translates to: DARELHGHGSDHPPPTSSTGRWI*ACTMAG
Trigger: CCCAGCCATGGTGCAGGCCCAGATCCACCTGCCGGT...GGAGCTGGTGGGTGGAGGATGGTCAGAACCATGTCCATGGAGCTCCCGGGCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR TCA 90 bp AAGGCAGGGGCTGATGAAGCCACATTCAGGGCCACTAAGGATGCCCGGGAGCTCACCGGGGTCCCTGACTaGGGAGGAGGGTACACGGTG +
Preference number: 4 (lower is better)
Translates to: KAGADEATFRATKDARELTGVPD*GGGYTV
Trigger: CACCGTGTACCCTCCTCCTCAGTCAGGGACCCCGGT...GAGCTCCCGGGCATCCTTAGTGGCCCTGAATGTGGCTTCATCAGCCCCTGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp GAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGAAACCCAGGTCCCCCAACCCCCGGTGGGCAGCGTGTTaGCTGTGGGGACTGACCTGG +
Preference number: 4 (lower is better)
Translates to: EAGFPDDFAGGKPRSPNPRWAAC*LWGLTW
Trigger: CCAGGTCAGTCCCCACAGCCAACACGCTGCCCACCG...GGGGTTGGGGGACCTGGGTTTCCCACCTGCAAAGTCATCAGGGAACCCAGCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp GCCTGGAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGAAACCCAGGTCCCCCATCTGGGCCTGCACCATaGCTGGGTAGGCAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: AWKLGSLMTLQVGNPGPPSGPAP*LGRQPG
Trigger: CCCAGGCTGCCTACCCAGCCATGGTGCAGGCCCAGA...TGGGGGACCTGGGTTTCCCACCTGCAAAGTCATCAGGGAACCCAGCTTCCAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp GACCATTCCGCTCCAGAGTTCGTCCTAGGAGCCACTCCGCCTCCTGGCTCCATTACCGGCAGGTGGATCTaGGCCTGCACCATGGCTGGG +
Preference number: 4 (lower is better)
Translates to: DHSAPEFVLGATPPPGSITGRWI*ACTMAG
Trigger: CCCAGCCATGGTGCAGGCCCAGATCCACCTGCCGGT...AATGGAGCCAGGAGGCGGAGTGGCTCCTAGGACGAACTCTGGAGCGGAATGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
CDS-3UTR CCA 90 bp AAGGCAGGGGCTGATGAAGCCACATTCAGGGCCACTAAGGATGCCCGGGAGCTCACCGGCAGGTGGATCTaGGCCTGCACCATGGCTGGG +
Preference number: 4 (lower is better)
Translates to: KAGADEATFRATKDARELTGRWI*ACTMAG
Trigger: CCCAGCCATGGTGCAGGCCCAGATCCACCTGCCGGT...GAGCTCCCGGGCATCCTTAGTGGCCCTGAATGTGGCTTCATCAGCCCCTGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp CGACTCTGCACACTGCCGGAGAAGGCAGGGGCTGATGAAGCCACATTCAGGGCCTGCACCACCGGCAGGTaGATCTGGGCCTGCACCATG +
Preference number: 4 (lower is better)
Translates to: RLCTLPEKAGADEATFRACTTGR*IWACTM
Trigger: CATGGTGCAGGCCCAGATCCACCTGCCGGTGGTGCA...GGCCCTGAATGTGGCTTCATCAGCCCCTGCCTTCTCCGGCAGTGTGCAGAGTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR TCA 90 bp GATGCCCGGGAGCTCCATGGACATGGTTCTGACCATCCTCCACCCACCAGCTCCCACAACCACCTGGGATaGAGGCCCCAGGGTGAGTGT +
Preference number: 4 (lower is better)
Translates to: DARELHGHGSDHPPPTSSHNHLG*RPQGEC
Trigger: ACACTCACCCTGGGGCCTTCATCCCAGGTGGTTGTG...GGAGCTGGTGGGTGGAGGATGGTCAGAACCATGTCCATGGAGCTCCCGGGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR TCA 90 bp GATGCCCGGGAGCTCCATGGACATGGTTCTGACCATCCTCCACCCACCAGCTCCCGCTCAGGTAGCCGATaGCAGGAGGTTGAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: DARELHGHGSDHPPPTSSRSGSR*QEVECQ
Trigger: CTGGCACTCAACCTCCTGTCATCGGCTACCTGAGCG...GGAGCTGGTGGGTGGAGGATGGTCAGAACCATGTCCATGGAGCTCCCGGGCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp TCCTCCACCCACCAGCTCCTCAACAGACCCTTGCAGACAATGCAAACGCACCAGCCTCCGAGGGCCGGCTaGTGGCGGGGATCTCACGTT +
Preference number: 4 (lower is better)
Translates to: SSTHQLLNRPLQTMQTHQPPRAG*WRGSHV
Trigger: AACGTGAGATCCCCGCCACCAGCCGGCCCTCGGAGG...CTGGTGCGTTTGCATTGTCTGCAAGGGTCTGTTGAGGAGCTGGTGGGTGGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp CACTGCCGGAGAAGGCAGGGGCTGATGAAGCCACATTCAGGGCCACTAAGGATGCCTGGGGGCACTGGGTaGGGAGTAATCCAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: HCRRRQGLMKPHSGPLRMPGGTG*GVIQPC
Trigger: GCAGGGCTGGATTACTCCCCACCCAGTGCCCCCAGG...CATCCTTAGTGGCCCTGAATGTGGCTTCATCAGCCCCTGCCTTCTCCGGCAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp CGCACTCCTTCACAAGGGACACGCACCCAGACACTCCCTTGCAGGATACTTCCCCGGTGGGCAGCGTGTTaGCTGTGGGGACTGACCTGG +
Preference number: 4 (lower is better)
Translates to: RTPSQGTRTQTLPCRILPRWAAC*LWGLTW
Trigger: CCAGGTCAGTCCCCACAGCCAACACGCTGCCCACCG...GGGAAGTATCCTGCAAGGGAGTGTCTGGGTGCGTGTCCCTTGTGAAGGAGTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp GATGTCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGGTGGACCGGGATGGGTaGGGGAGATGTCGCCCGCCC +
Preference number: 4 (lower is better)
Translates to: DVSLQCLEAGFPDDFAGGVDRDG*GRCRPP
Trigger: GGGCGGGCGACATCTCCCCCACCCATCCCGGTCCAC...CCCACCTGCAAAGTCATCAGGGAACCCAGCTTCCAGGCATTGTAGGGAGACATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp TCCTCCACCCACCAGCTCCTCAACAGACCCTTGCAGACAATGCAAACGCACCAGGGAGGTGGACCGGGATaGGTGGGGGAGATGTCGCCC +
Preference number: 4 (lower is better)
Translates to: SSTHQLLNRPLQTMQTHQGGGPG*VGEMSP
Trigger: GGGCGACATCTCCCCCACCCATCCCGGTCCACCTCC...CTGGTGCGTTTGCATTGTCTGCAAGGGTCTGTTGAGGAGCTGGTGGGTGGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp GATGCCCGGGAGCTCCATGGACATGGTTCTGACCATCCTCCACCCACCAGCTCCGGGATGAGCAGGGGCTaGTTACCTGGGATCACCAGG +
Preference number: 4 (lower is better)
Translates to: DARELHGHGSDHPPPTSSGMSRG*LPGITR
Trigger: CCTGGTGATCCCAGGTAACCAGCCCCTGCTCATCCC...GGAGCTGGTGGGTGGAGGATGGTCAGAACCATGTCCATGGAGCTCCCGGGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp CACTGCCGGAGAAGGCAGGGGCTGATGAAGCCACATTCAGGGCCACTAAGGATGTCTGGGCCTGCACCATaGCTGGGTAGGCAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: HCRRRQGLMKPHSGPLRMSGPAP*LGRQPG
Trigger: CCCAGGCTGCCTACCCAGCCATGGTGCAGGCCCAGA...CATCCTTAGTGGCCCTGAATGTGGCTTCATCAGCCCCTGCCTTCTCCGGCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR TCA 90 bp CGCACTCCTTCACAAGGGACACGCACCCAGACACTCCCTTGCAGGATACTTCCCAGACACCGGGGTCCCTaGCTGAGGAGGAGGGTACAC +
Preference number: 4 (lower is better)
Translates to: RTPSQGTRTQTLPCRILPRHRGP*LRRRVH
Trigger: GTGTACCCTCCTCCTCAGTCAGGGACCCCGGTGTCT...GGGAAGTATCCTGCAAGGGAGTGTCTGGGTGCGTGTCCCTTGTGAAGGAGTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR TCA 90 bp CTCAACAGACCCTTGCAGACAATGCAAACGCACCAGTCTCCTGCGACACACCTGCAGCTGGGAGCGCTGTaGTGGAGTGGTGGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: LNRPLQTMQTHQSPATHLQLGAL*WSGGPC
Trigger: GCAGGGGCCACCACTCCATCACAGCGCTCCCAGCTG...CAGGTGTGTCGCAGGAGACTGGTGCGTTTGCATTGTCTGCAAGGGTCTGTTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR TCA 90 bp GATGTCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGCAGCTGGGAGCGCTGTaGTGGAGTGGTGGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: DVSLQCLEAGFPDDFAGGQLGAL*WSGGPC
Trigger: GCAGGGGCCACCACTCCATCACAGCGCTCCCAGCTG...CCCACCTGCAAAGTCATCAGGGAACCCAGCTTCCAGGCATTGTAGGGAGACATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR TCA 90 bp GAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGAAACCCAGGTCCCCCAACCCCTGCGGGATCATCGTCTaGTGGGGATGGAGGTGGACC +
Preference number: 4 (lower is better)
Translates to: EAGFPDDFAGGKPRSPNPCGIIV*WGWRWT
Trigger: GGTCCACCTCCATCCCCATCAGACGATGATCCCGCA...GGGGTTGGGGGACCTGGGTTTCCCACCTGCAAAGTCATCAGGGAACCCAGCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR TCA 90 bp CCATCTGCCTGTCTGATGTCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGATGGGCTGCCCACCGGGATaGGCAGGGGCTGGTTACCTG +
Preference number: 4 (lower is better)
Translates to: PSACLMSPYNAWKLGSLMGCPPG*AGAGYL
Trigger: CAGGTAACCAGCCCCTGCTCATCCCGGTGGGCAGCC...CATCAGGGAACCCAGCTTCCAGGCATTGTAGGGAGACATCAGACAGGCAGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR TCA 90 bp AAGGCAGGGGCTGATGAAGCCACATTCAGGGCCACTAAGGATGCCCGGGAGCTCGGGCGCTTCCCTGGTTaGTTCCGTTTTCCTGCTCCG +
Preference number: 4 (lower is better)
Translates to: KAGADEATFRATKDARELGRFPG*FRFPAP
Trigger: CGGAGCAGGAAAACGGAATCAACCAGGGAAGCGCCC...GAGCTCCCGGGCATCCTTAGTGGCCCTGAATGTGGCTTCATCAGCCCCTGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR GCA 90 bp ACTAGTTTCCCATCTGCCTGTCTGATGTCTCCCTACAATGCCTGGAAGCTGGGTGTCCCTGCTGACCCGTaGCGCCCACCCCCATGGCCG +
Preference number: 4 (lower is better)
Translates to: TSFPSACLMSPYNAWKLGVPADP*RPPPWP
Trigger: CGGCCATGGGGGTGGGCGGCACGGGTCAGCAGGGAC...ACCCAGCTTCCAGGCATTGTAGGGAGACATCAGACAGGCAGATGGGAAACTAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR GCA 90 bp AAGGCAGGGGCTGATGAAGCCACATTCAGGGCCACTAAGGATGCCCGGGAGCTCGAAAGGTGGGCGTACTaGACAGGAGACACCGGGGTC +
Preference number: 4 (lower is better)
Translates to: KAGADEATFRATKDARELERWAY*TGDTGV
Trigger: GACCCCGGTGTCTCCTGTGCAGTACGCCCACCTTTC...GAGCTCCCGGGCATCCTTAGTGGCCCTGAATGTGGCTTCATCAGCCCCTGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR GCA 90 bp ACCATCCTCCACCCACCAGCTCCTCAACAGACCCTTGCAGACAATGCAAACGCAGGGGACGCCACGGACTaGACCACCGGCAGGTGGATC +
Preference number: 4 (lower is better)
Translates to: TILHPPAPQQTLADNANAGDATD*TTGRWI
Trigger: GATCCACCTGCCGGTGGTGCAGTCCGTGGCGTCCCC...TGCGTTTGCATTGTCTGCAAGGGTCTGTTGAGGAGCTGGTGGGTGGAGGATGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp CACTCCTTCACAAGGGACACGCACCCAGACACTCCCTTGCAGGATACTTCCCACCCGAGGGCCGGCTGGTaGCGGGGATCTCACGTTTCT +
Preference number: 4 (lower is better)
Translates to: HSFTRDTHPDTPLQDTSHPRAGW*RGSHVS
Trigger: AGAAACGTGAGATCCCCGCCACCAGCCGGCCCTCGG...GTGGGAAGTATCCTGCAAGGGAGTGTCTGGGTGCGTGTCCCTTGTGAAGGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp ACCATCCTCCACCCACCAGCTCCTCAACAGACCCTTGCAGACAATGCAAACGCACCTCCGAGGGCCGGCTaGTGGCGGGGATCTCACGTT +
Preference number: 4 (lower is better)
Translates to: TILHPPAPQQTLADNANAPPRAG*WRGSHV
Trigger: AACGTGAGATCCCCGCCACCAGCCGGCCCTCGGAGG...TGCGTTTGCATTGTCTGCAAGGGTCTGTTGAGGAGCTGGTGGGTGGAGGATGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp TTCCCATCTGCCTGTCTGATGTCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGCCTCCGAGGGCCGGCTaGTGGCGGGGATCTCACGTT +
Preference number: 4 (lower is better)
Translates to: FPSACLMSPYNAWKLGSLPPRAG*WRGSHV
Trigger: AACGTGAGATCCCCGCCACCAGCCGGCCCTCGGAGG...CAGGGAACCCAGCTTCCAGGCATTGTAGGGAGACATCAGACAGGCAGATGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp GCCTGGAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGAAACCCAGGTCCCCCACGCAGTGGTTGTCGCTaGGCAGAGCAGTGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: AWKLGSLMTLQVGNPGPPRSGCR*AEQWPS
Trigger: AGAAGGCCACTGCTCTGCCCAGCGACAACCACTGCG...TGGGGGACCTGGGTTTCCCACCTGCAAAGTCATCAGGGAACCCAGCTTCCAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp GAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGAAACCCAGGTCCCCCAACCCCACACCCTCCACGCAGTaGTTGTCGCTGGGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: EAGFPDDFAGGKPRSPNPTPSTQ*LSLGRA
Trigger: TGCTCTGCCCAGCGACAACCACTGCGTGGAGGGTGT...GGGGTTGGGGGACCTGGGTTTCCCACCTGCAAAGTCATCAGGGAACCCAGCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp CGACTCTGCACACTGCCGGAGAAGGCAGGGGCTGATGAAGCCACATTCAGGGCCGATGGGGAGATCAGCTaGGAAGGGATAAAGCCCGCG +
Preference number: 4 (lower is better)
Translates to: RLCTLPEKAGADEATFRADGEIS*EGIKPA
Trigger: CGCGGGCTTTATCCCTTCCCAGCTGATCTCCCCATC...GGCCCTGAATGTGGCTTCATCAGCCCCTGCCTTCTCCGGCAGTGTGCAGAGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp GACCATTCCGCTCCAGAGTTCGTCCTAGGAGCCACTCCGCCTCCTGGCTCCATTGCTGTGATGGAGTGGTaGCCCCTGCAGCTGAGGCTA +
Preference number: 4 (lower is better)
Translates to: DHSAPEFVLGATPPPGSIAVMEW*PLQLRL
Trigger: TAGCCTCAGCTGCAGGGGCCACCACTCCATCACAGC...AATGGAGCCAGGAGGCGGAGTGGCTCCTAGGACGAACTCTGGAGCGGAATGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
CDS-3UTR CCA 90 bp ATGTCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGAGTGGACCGGGATGGGTaGGGGAGATGTCGCCCGCCC +
Preference number: 4 (lower is better)
Translates to: MSPYNAWKLGSLMTLQVGVDRDG*GRCRPP
Trigger: GGGCGGGCGACATCTCCCCCACCCATCCCGGTCCAC...TCCCACCTGCAAAGTCATCAGGGAACCCAGCTTCCAGGCATTGTAGGGAGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR TCA 90 bp ACCATCCTCCACCCACCAGCTCCTCAACAGACCCTTGCAGACAATGCAAACGCAACCGGGGTCCCTGACTaGGGAGGAGGGTACACGGTG +
Preference number: 4 (lower is better)
Translates to: TILHPPAPQQTLADNANATGVPD*GGGYTV
Trigger: CACCGTGTACCCTCCTCCTCAGTCAGGGACCCCGGT...TGCGTTTGCATTGTCTGCAAGGGTCTGTTGAGGAGCTGGTGGGTGGAGGATGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR TCA 90 bp TCCTCCACCCACCAGCTCCTCAACAGACCCTTGCAGACAATGCAAACGCACCAGAGACACCGGGGTCCCTaGCTGAGGAGGAGGGTACAC +
Preference number: 4 (lower is better)
Translates to: SSTHQLLNRPLQTMQTHQRHRGP*LRRRVH
Trigger: GTGTACCCTCCTCCTCAGTCAGGGACCCCGGTGTCT...CTGGTGCGTTTGCATTGTCTGCAAGGGTCTGTTGAGGAGCTGGTGGGTGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR TCA 90 bp CTACAGTACAGTAATCTGGATACAGACAGTAAAAGGAGGCCCCGGGCCTCCGCTCAGCTGGGAGCGCTGTaGTGGAGTGGTGGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: LQYSNLDTDSKRRPRASAQLGAL*WSGGPC
Trigger: GCAGGGGCCACCACTCCATCACAGCGCTCCCAGCTG...AGCGGAGGCCCGGGGCCTCCTTTTACTGTCTGTATCCAGATTACTGTACTGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR TCA 90 bp CGCACTCCTTCACAAGGGACACGCACCCAGACACTCCCTTGCAGGATACTTCCCTGCGGGATCATCGTCTaGTGGGGATGGAGGTGGACC +
Preference number: 4 (lower is better)
Translates to: RTPSQGTRTQTLPCRILPCGIIV*WGWRWT
Trigger: GGTCCACCTCCATCCCCATCAGACGATGATCCCGCA...GGGAAGTATCCTGCAAGGGAGTGTCTGGGTGCGTGTCCCTTGTGAAGGAGTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR TCA 90 bp CGCACTCCTTCACAAGGGACACGCACCCAGACACTCCCTTGCAGGATACTTCCCCGCTCAGGTAGCCGATaGCAGGAGGTTGAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: RTPSQGTRTQTLPCRILPRSGSR*QEVECQ
Trigger: CTGGCACTCAACCTCCTGTCATCGGCTACCTGAGCG...GGGAAGTATCCTGCAAGGGAGTGTCTGGGTGCGTGTCCCTTGTGAAGGAGTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR TCA 90 bp CGCACTCCTTCACAAGGGACACGCACCCAGACACTCCCTTGCAGGATACTTCCCTGGGCAGGGCGGTGGTaGCAAACGTGTGAGGTACTG +
Preference number: 4 (lower is better)
Translates to: RTPSQGTRTQTLPCRILPWAGRW*QTCEVL
Trigger: CAGTACCTCACACGTTTGTCACCACCGCCCTGCCCA...GGGAAGTATCCTGCAAGGGAGTGTCTGGGTGCGTGTCCCTTGTGAAGGAGTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR TCA 90 bp GAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGAAACCCAGGTCCCCCAACCCCCCAGAGCCTCTGGGTTaGAGTTCTCGCTCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: EAGFPDDFAGGKPRSPNPPEPLG*SSRSWA
Trigger: TGCCCAAGAGCGAGAACTTCAACCCAGAGGCTCTGG...GGGGTTGGGGGACCTGGGTTTCCCACCTGCAAAGTCATCAGGGAACCCAGCTTC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR GCA 90 bp CCTTGCAGACAATGCAAACGCACCAGTCTCCTGCGACACACCTGTTTGACTCTACGCGGATGCCAGGGGTaGTGGGGAGCCAGGCCACAC +
Preference number: 4 (lower is better)
Translates to: PCRQCKRTSLLRHTCLTLRGCQG*WGARPH
Trigger: GTGTGGCCTGGCTCCCCAGCACCCCTGGCATCCGCG...TAGAGTCAAACAGGTGTGTCGCAGGAGACTGGTGCGTTTGCATTGTCTGCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR GCA 90 bp AAGGCAGGGGCTGATGAAGCCACATTCAGGGCCACTAAGGATGCCCGGGAGCTCACGACTGCTGTAGTCTaGTGGGCTTGGGTGGACCAC +
Preference number: 4 (lower is better)
Translates to: KAGADEATFRATKDARELTTAVV*WAWVDH
Trigger: GTGGTCCACCCAAGCCCAGCAGACTACAGCAGTCGT...GAGCTCCCGGGCATCCTTAGTGGCCCTGAATGTGGCTTCATCAGCCCCTGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR GCA 90 bp GCCTGGAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGAAACCCAGGTCCCCCACTGTCGGTCTTTGCCTaGTTCAGCAGGACGCTGGCA +
Preference number: 4 (lower is better)
Translates to: AWKLGSLMTLQVGNPGPPLSVFA*FSRTLA
Trigger: TGCCAGCGTCCTGCTGAAGCAGGCAAAGACCGACAG...TGGGGGACCTGGGTTTCCCACCTGCAAAGTCATCAGGGAACCCAGCTTCCAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR GCA 90 bp CCTCCAGCCTTTCTCTGGCCAGCGAGGGGAAGAAAGGTCAGCCCACCGAACAAGCGTATCTGTGTCTGCTaGCAGCCAGGCTGTCGGTCT +
Preference number: 4 (lower is better)
Translates to: PPAFLWPARGRKVSPPNKRICVC*QPGCRS
Trigger: AGACCGACAGCCTGGCTGGCAGCAGACACAGATACG...CTTGTTCGGTGGGCTGACCTTTCTTCCCCTCGCTGGCCAGAGAAAGGCTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
CDS-3UTR CCA 90 bp CTACAGTACAGTAATCTGGATACAGACAGTAAAAGGAGGCCCCGGGCCTCCGCTCGCTGGGCAGAGCAGTaGCCTTCTCCTCCGAGGGCC +
Preference number: 4 (lower is better)
Translates to: LQYSNLDTDSKRRPRASARWAEQ*PSPPRA
Trigger: GGCCCTCGGAGGAGAAGGCCACTGCTCTGCCCAGCG...AGCGGAGGCCCGGGGCCTCCTTTTACTGTCTGTATCCAGATTACTGTACTGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp CACTGCCGGAGAAGGCAGGGGCTGATGAAGCCACATTCAGGGCCACTAAGGATGACACCCTCCACGCAGTaGTTGTCGCTGGGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: HCRRRQGLMKPHSGPLRMTPSTQ*LSLGRA
Trigger: TGCTCTGCCCAGCGACAACCACTGCGTGGAGGGTGT...CATCCTTAGTGGCCCTGAATGTGGCTTCATCAGCCCCTGCCTTCTCCGGCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp GATGTCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGGCAGCGTGTTGGCTGTaGGGACTGACCTGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: DVSLQCLEAGFPDDFAGGAACWL*GLTWGH
Trigger: GTGCCCCCAGGTCAGTCCCCACAGCCAACACGCTGC...CCCACCTGCAAAGTCATCAGGGAACCCAGCTTCCAGGCATTGTAGGGAGACATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp AGAGAAAGAGACACCCTCACTCGCACTCCTTCACAAGGGACACGCACCCAGACAGCAGCGTGTTGGCTGTaGGGACTGACCTGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: RERDTLTRTPSQGTRTQTAACWL*GLTWGH
Trigger: GTGCCCCCAGGTCAGTCCCCACAGCCAACACGCTGC...TGTCTGGGTGCGTGTCCCTTGTGAAGGAGTGCGAGTGAGGGTGTCTCTTTCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp AATCTGGATACAGACAGTAAAAGGAGGCCCCGGGCCTCCGCTGCCCGCAAGGTCGATGGGGAGATCAGCTaGGAAGGGATAAAGCCCGCG +
Preference number: 4 (lower is better)
Translates to: NLDTDSKRRPRASAARKVDGEIS*EGIKPA
Trigger: CGCGGGCTTTATCCCTTCCCAGCTGATCTCCCCATC...GACCTTGCGGGCAGCGGAGGCCCGGGGCCTCCTTTTACTGTCTGTATCCAGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp ACCATCCTCCACCCACCAGCTCCTCAACAGACCCTTGCAGACAATGCAAACGCAACTGGTTCTGCTGGGTaGGTGGAGGAGGGGACCCCG +
Preference number: 4 (lower is better)
Translates to: TILHPPAPQQTLADNANATGSAG*VEEGTP
Trigger: CGGGGTCCCCTCCTCCACCCACCCAGCAGAACCAGT...TGCGTTTGCATTGTCTGCAAGGGTCTGTTGAGGAGCTGGTGGGTGGAGGATGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp TGCCTGTCTGATGTCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGATGACTTTGTGGACCGGGATGGGTaGGGGAGATGTCGCCCGCCC +
Preference number: 4 (lower is better)
Translates to: CLSDVSLQCLEAGFPDDFVDRDG*GRCRPP
Trigger: GGGCGGGCGACATCTCCCCCACCCATCCCGGTCCAC...AAAGTCATCAGGGAACCCAGCTTCCAGGCATTGTAGGGAGACATCAGACAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp GATGTCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGCAGCGTAGAAGGCCGTaGCTGGTAGGCCCACCGGGA +
Preference number: 4 (lower is better)
Translates to: DVSLQCLEAGFPDDFAGGQRRRP*LVGPPG
Trigger: TCCCGGTGGGCCTACCAGCCACGGCCTTCTACGCTG...CCCACCTGCAAAGTCATCAGGGAACCCAGCTTCCAGGCATTGTAGGGAGACATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp GATGTCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGTCTGGGCCTGCACCATaGCTGGGTAGGCAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: DVSLQCLEAGFPDDFAGGSGPAP*LGRQPG
Trigger: CCCAGGCTGCCTACCCAGCCATGGTGCAGGCCCAGA...CCCACCTGCAAAGTCATCAGGGAACCCAGCTTCCAGGCATTGTAGGGAGACATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp TACCGTGCTCCCTACACAGTTGACCAAAGGTGCTCCGGGAGCCTGGAGGACCCCGCAGGGTCCACAGGCTaGCCCTTTTTAACAGAGCCA +
Preference number: 4 (lower is better)
Translates to: YRAPYTVDQRCSGSLEDPAGSTG*PFLTEP
Trigger: TGGCTCTGTTAAAAAGGGCCAGCCTGTGGACCCTGC...GGGGTCCTCCAGGCTCCCGGAGCACCTTTGGTCAACTGTGTAGGGAGCACGGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR CAA 72 bp GATGAGGGCACTGCTATTACCGTGCTCCCTACACAGTaGACCAAAGGTGCTCCGGGAGCCTGGAGGACCCCA +
Preference number: 4 (lower is better)
Translates to: DEGTAITVLPTQ*TKGAPGAWRTP
Trigger: TGGGGTCCTCCAGGCTCCCGGAGCACCTTTGGTCAACTGTGTAGGGAGCACGGTAATAGCAGTGCCCTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
CDS-3UTR TCA 90 bp CTACAGTACAGTAATCTGGATACAGACAGTAAAAGGAGGCCCCGGGCCTCCGCTACCGGGGTCCCTGACTaGGGAGGAGGGTACACGGTG +
Preference number: 4 (lower is better)
Translates to: LQYSNLDTDSKRRPRASATGVPD*GGGYTV
Trigger: CACCGTGTACCCTCCTCCTCAGTCAGGGACCCCGGT...AGCGGAGGCCCGGGGCCTCCTTTTACTGTCTGTATCCAGATTACTGTACTGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR TCA 90 bp TCCTCCACCCACCAGCTCCTCAACAGACCCTTGCAGACAATGCAAACGCACCAGATGAAGGCCCCAGGGTaGGTGTGTGCGGGATCATCG +
Preference number: 4 (lower is better)
Translates to: SSTHQLLNRPLQTMQTHQMKAPG*VCAGSS
Trigger: CGATGATCCCGCACACACTCACCCTGGGGCCTTCAT...CTGGTGCGTTTGCATTGTCTGCAAGGGTCTGTTGAGGAGCTGGTGGGTGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR TCA 90 bp TCCTCCACCCACCAGCTCCTCAACAGACCCTTGCAGACAATGCAAACGCACCAGCACAACCACCTGGGATaGAGGCCCCAGGGTGAGTGT +
Preference number: 4 (lower is better)
Translates to: SSTHQLLNRPLQTMQTHQHNHLG*RPQGEC
Trigger: ACACTCACCCTGGGGCCTTCATCCCAGGTGGTTGTG...CTGGTGCGTTTGCATTGTCTGCAAGGGTCTGTTGAGGAGCTGGTGGGTGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR TCA 90 bp TGCCTGTCTGATGTCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGATGACTTTGGCTGCCCACCGGGATaGGCAGGGGCTGGTTACCTG +
Preference number: 4 (lower is better)
Translates to: CLSDVSLQCLEAGFPDDFGCPPG*AGAGYL
Trigger: CAGGTAACCAGCCCCTGCTCATCCCGGTGGGCAGCC...AAAGTCATCAGGGAACCCAGCTTCCAGGCATTGTAGGGAGACATCAGACAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR GCA 90 bp TCCTCCACCCACCAGCTCCTCAACAGACCCTTGCAGACAATGCAAACGCACCAGGAAAGGTGGGCGTACTaGACAGGAGACACCGGGGTC +
Preference number: 4 (lower is better)
Translates to: SSTHQLLNRPLQTMQTHQERWAY*TGDTGV
Trigger: GACCCCGGTGTCTCCTGTGCAGTACGCCCACCTTTC...CTGGTGCGTTTGCATTGTCTGCAAGGGTCTGTTGAGGAGCTGGTGGGTGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR GCA 90 bp GCCTGGAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGAAACCCAGGTCCCCCATTGGCTTGCATAGCCTaGTGCAACCTGCTGCTCTCG +
Preference number: 4 (lower is better)
Translates to: AWKLGSLMTLQVGNPGPPLACIA*CNLLLS
Trigger: CGAGAGCAGCAGGTTGCAGCAGGCTATGCAAGCCAA...TGGGGGACCTGGGTTTCCCACCTGCAAAGTCATCAGGGAACCCAGCTTCCAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR GCA 90 bp AATCTGGATACAGACAGTAAAAGGAGGCCCCGGGCCTCCGCTGCCCGCAAGGTCTTGGCTTGCATAGCCTaGTGCAACCTGCTGCTCTCG +
Preference number: 4 (lower is better)
Translates to: NLDTDSKRRPRASAARKVLACIA*CNLLLS
Trigger: CGAGAGCAGCAGGTTGCAGCAGGCTATGCAAGCCAA...GACCTTGCGGGCAGCGGAGGCCCGGGGCCTCCTTTTACTGTCTGTATCCAGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp TCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGAAACCCGAGGGCCGGCTGGTaGCGGGGATCTCACGTTTCT +
Preference number: 4 (lower is better)
Translates to: SPYNAWKLGSLMTLQVGNPRAGW*RGSHVS
Trigger: AGAAACGTGAGATCCCCGCCACCAGCCGGCCCTCGG...GTTTCCCACCTGCAAAGTCATCAGGGAACCCAGCTTCCAGGCATTGTAGGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp TCCTCCACCCACCAGCTCCTCAACAGACCCTTGCAGACAATGCAAACGCACCAGGCTGTGATGGAGTGGTaGCCCCTGCAGCTGAGGCTA +
Preference number: 4 (lower is better)
Translates to: SSTHQLLNRPLQTMQTHQAVMEW*PLQLRL
Trigger: TAGCCTCAGCTGCAGGGGCCACCACTCCATCACAGC...CTGGTGCGTTTGCATTGTCTGCAAGGGTCTGTTGAGGAGCTGGTGGGTGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp CTACAATGCCTGGAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGAAACCCAGGTGCACCACCGGCAGGTaGATCTGGGCCTGCACCATG +
Preference number: 4 (lower is better)
Translates to: LQCLEAGFPDDFAGGKPRCTTGR*IWACTM
Trigger: CATGGTGCAGGCCCAGATCCACCTGCCGGTGGTGCA...CCTGGGTTTCCCACCTGCAAAGTCATCAGGGAACCCAGCTTCCAGGCATTGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp GCCTGGAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGAAACCCAGGTCCCCCAGCAGGGTCCACAGGCTaGCCCTTTTTAACAGAGCCA +
Preference number: 4 (lower is better)
Translates to: AWKLGSLMTLQVGNPGPPAGSTG*PFLTEP
Trigger: TGGCTCTGTTAAAAAGGGCCAGCCTGTGGACCCTGC...TGGGGGACCTGGGTTTCCCACCTGCAAAGTCATCAGGGAACCCAGCTTCCAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp CTACAGTACAGTAATCTGGATACAGACAGTAAAAGGAGGCCCCGGGCCTCCGCTGCTTCAGCAGGACGCTaGCAGGGTCCACAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LQYSNLDTDSKRRPRASAASAGR*QGPQAG
Trigger: GCCAGCCTGTGGACCCTGCCAGCGTCCTGCTGAAGC...AGCGGAGGCCCGGGGCCTCCTTTTACTGTCTGTATCCAGATTACTGTACTGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp TCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGAAACGCTTCAGCAGGACGCTaGCAGGGTCCACAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SPYNAWKLGSLMTLQVGNASAGR*QGPQAG
Trigger: GCCAGCCTGTGGACCCTGCCAGCGTCCTGCTGAAGC...GTTTCCCACCTGCAAAGTCATCAGGGAACCCAGCTTCCAGGCATTGTAGGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR TCA 90 bp CTACAATGCCTGGAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGAAACCCAGGTGCGGGATCATCGTCTaGTGGGGATGGAGGTGGACC +
Preference number: 4 (lower is better)
Translates to: LQCLEAGFPDDFAGGKPRCGIIV*WGWRWT
Trigger: GGTCCACCTCCATCCCCATCAGACGATGATCCCGCA...CCTGGGTTTCCCACCTGCAAAGTCATCAGGGAACCCAGCTTCCAGGCATTGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR TCA 90 bp CTACAATGCCTGGAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGAAACCCAGGCACCGGGAGAGGCTCTaGTGCACTGTGTGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: LQCLEAGFPDDFAGGKPRHRERL*CTVCGL
Trigger: CAGACCACACACAGTGCATCAGAGCCTCTCCCGGTG...CCTGGGTTTCCCACCTGCAAAGTCATCAGGGAACCCAGCTTCCAGGCATTGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR TCA 90 bp GATGTCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGCACCGGGAGAGGCTCTaGTGCACTGTGTGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: DVSLQCLEAGFPDDFAGGHRERL*CTVCGL
Trigger: CAGACCACACACAGTGCATCAGAGCCTCTCCCGGTG...CCCACCTGCAAAGTCATCAGGGAACCCAGCTTCCAGGCATTGTAGGGAGACATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR TCA 90 bp CTCAACAGACCCTTGCAGACAATGCAAACGCACCAGTCTCCTGCGACACACCTGGACCACCAGCATAGGTaGTTGCTTGCTGCTGGCCGC +
Preference number: 4 (lower is better)
Translates to: LNRPLQTMQTHQSPATHLDHQHR*LLAAGR
Trigger: GCGGCCAGCAGCAAGCAATCACCTATGCTGGTGGTC...CAGGTGTGTCGCAGGAGACTGGTGCGTTTGCATTGTCTGCAAGGGTCTGTTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR TCA 90 bp AATCTGGATACAGACAGTAAAAGGAGGCCCCGGGCCTCCGCTGCCCGCAAGGTCGTGGTGACAAACGTGTaGGGTACTGCAGCAAACTGG +
Preference number: 4 (lower is better)
Translates to: NLDTDSKRRPRASAARKVVVTNV*GTAANW
Trigger: CCAGTTTGCTGCAGTACCTCACACGTTTGTCACCAC...GACCTTGCGGGCAGCGGAGGCCCGGGGCCTCCTTTTACTGTCTGTATCCAGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR TCA 90 bp GATGTCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGTGGGCAGGGCGGTGGTaGCAAACGTGTGAGGTACTG +
Preference number: 4 (lower is better)
Translates to: DVSLQCLEAGFPDDFAGGWAGRW*QTCEVL
Trigger: CAGTACCTCACACGTTTGTCACCACCGCCCTGCCCA...CCCACCTGCAAAGTCATCAGGGAACCCAGCTTCCAGGCATTGTAGGGAGACATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR TCA 90 bp CTCAACAGACCCTTGCAGACAATGCAAACGCACCAGTCTCCTGCGACACACCTGGGGCGCTTCCCTGGTTaGTTCCGTTTTCCTGCTCCG +
Preference number: 4 (lower is better)
Translates to: LNRPLQTMQTHQSPATHLGRFPG*FRFPAP
Trigger: CGGAGCAGGAAAACGGAATCAACCAGGGAAGCGCCC...CAGGTGTGTCGCAGGAGACTGGTGCGTTTGCATTGTCTGCAAGGGTCTGTTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR TCA 90 bp AATCTGGATACAGACAGTAAAAGGAGGCCCCGGGCCTCCGCTGCCCGCAAGGTCTCGGTTCTATTTTGCTaGGGAAGGGTGCTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: NLDTDSKRRPRASAARKVSVLFC*GRVLQA
Trigger: TGCCTGCAGCACCCTTCCTCAGCAAAATAGAACCGA...GACCTTGCGGGCAGCGGAGGCCCGGGGCCTCCTTTTACTGTCTGTATCCAGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR GCA 90 bp AAGGCAGGGGCTGATGAAGCCACATTCAGGGCCACTAAGGATGCCCGGGAGCTCGAGGCAGGCATTCGTTaGTCCGCTCTTGGTTGGATT +
Preference number: 4 (lower is better)
Translates to: KAGADEATFRATKDARELEAGIR*SALGWI
Trigger: AATCCAACCAAGAGCGGAGCAACGAATGCCTGCCTC...GAGCTCCCGGGCATCCTTAGTGGCCCTGAATGTGGCTTCATCAGCCCCTGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR GCA 90 bp TTCCCATCTGCCTGTCTGATGTCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGGAAAGGTGGGCGTACTaGACAGGAGACACCGGGGTC +
Preference number: 4 (lower is better)
Translates to: FPSACLMSPYNAWKLGSLERWAY*TGDTGV
Trigger: GACCCCGGTGTCTCCTGTGCAGTACGCCCACCTTTC...CAGGGAACCCAGCTTCCAGGCATTGTAGGGAGACATCAGACAGGCAGATGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR GCA 90 bp CGACTCTGCACACTGCCGGAGAAGGCAGGGGCTGATGAAGCCACATTCAGGGCCATGAACTGGAAGGTATaGGAAAGGTGGGCGTACTGC +
Preference number: 4 (lower is better)
Translates to: RLCTLPEKAGADEATFRAMNWKV*ERWAYC
Trigger: GCAGTACGCCCACCTTTCGCATACCTTCCAGTTCAT...GGCCCTGAATGTGGCTTCATCAGCCCCTGCCTTCTCCGGCAGTGTGCAGAGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR GCA 90 bp CACTCCTTCACAAGGGACACGCACCCAGACACTCCCTTGCAGGATACTTCCCACTGGATGTACTGGTTCTaGTGGGTGGGTGGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: HSFTRDTHPDTPLQDTSHWMYWF*WVGGGG
Trigger: CCCTCCTCCACCCACCCAGCAGAACCAGTACATCCA...GTGGGAAGTATCCTGCAAGGGAGTGTCTGGGTGCGTGTCCCTTGTGAAGGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR GCA 90 bp GAGGTGTGGAAGGTTCTGCAGGGTTCCTTGCAAGGGAGAAAGGACGCTGCCACTGCTTGCATAGCCTGCTaGAACCTGCTGCTCTCGGCT +
Preference number: 4 (lower is better)
Translates to: EVWKVLQGSLQGRKDAATACIAC*NLLLSA
Trigger: AGCCGAGAGCAGCAGGTTGCAGCAGGCTATGCAAGC...AGTGGCAGCGTCCTTTCTCCCTTGCAAGGAACCCTGCAGAACCTTCCACACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
CDS-3UTR GCA 90 bp TCCTCCACCCACCAGCTCCTCAACAGACCCTTGCAGACAATGCAAACGCACCAGCAGGCTGTCGGTCTTTaGCTGCTTCAGCAGGACGCT +
Preference number: 4 (lower is better)
Translates to: SSTHQLLNRPLQTMQTHQQAVGL*LLQQDA
Trigger: AGCGTCCTGCTGAAGCAGGCAAAGACCGACAGCCTG...CTGGTGCGTTTGCATTGTCTGCAAGGGTCTGTTGAGGAGCTGGTGGGTGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR GCA 90 bp GACCATCCTCCACCCACCAGCTCCTCAACAGACCCTTGCAGACAATGCAAACGCCGTATCTGTGTCTGCTaGCAGCCAGGCTGTCGGTCT +
Preference number: 4 (lower is better)
Translates to: DHPPPTSSSTDPCRQCKRRICVC*QPGCRS
Trigger: AGACCGACAGCCTGGCTGGCAGCAGACACAGATACG...GCGTTTGCATTGTCTGCAAGGGTCTGTTGAGGAGCTGGTGGGTGGAGGATGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp ACTAGTTTCCCATCTGCCTGTCTGATGTCTCCCTACAATGCCTGGAAGCTGGGTCGGTGGGCAGCGTGTTaGCTGTGGGGACTGACCTGG +
Preference number: 4 (lower is better)
Translates to: TSFPSACLMSPYNAWKLGRWAAC*LWGLTW
Trigger: CCAGGTCAGTCCCCACAGCCAACACGCTGCCCACCG...ACCCAGCTTCCAGGCATTGTAGGGAGACATCAGACAGGCAGATGGGAAACTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp TCCTCCACCCACCAGCTCCTCAACAGACCCTTGCAGACAATGCAAACGCACCAGGATGGGGAGATCAGCTaGGAAGGGATAAAGCCCGCG +
Preference number: 4 (lower is better)
Translates to: SSTHQLLNRPLQTMQTHQDGEIS*EGIKPA
Trigger: CGCGGGCTTTATCCCTTCCCAGCTGATCTCCCCATC...CTGGTGCGTTTGCATTGTCTGCAAGGGTCTGTTGAGGAGCTGGTGGGTGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp CTACAATGCCTGGAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGAAACCCAGGGCTGTGATGGAGTGGTaGCCCCTGCAGCTGAGGCTA +
Preference number: 4 (lower is better)
Translates to: LQCLEAGFPDDFAGGKPRAVMEW*PLQLRL
Trigger: TAGCCTCAGCTGCAGGGGCCACCACTCCATCACAGC...CCTGGGTTTCCCACCTGCAAAGTCATCAGGGAACCCAGCTTCCAGGCATTGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp CCTTGCAGACAATGCAAACGCACCAGTCTCCTGCGACACACCTGTTTGACTCTAACTGGTTCTGCTGGGTaGGTGGAGGAGGGGACCCCG +
Preference number: 4 (lower is better)
Translates to: PCRQCKRTSLLRHTCLTLTGSAG*VEEGTP
Trigger: CGGGGTCCCCTCCTCCACCCACCCAGCAGAACCAGT...TAGAGTCAAACAGGTGTGTCGCAGGAGACTGGTGCGTTTGCATTGTCTGCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp CGCACTCCTTCACAAGGGACACGCACCCAGACACTCCCTTGCAGGATACTTCCCCCGCCCGGAGCTCTGTaGAGAGCTGGAAATATGGAT +
Preference number: 4 (lower is better)
Translates to: RTPSQGTRTQTLPCRILPPPGAL*RAGNMD
Trigger: ATCCATATTTCCAGCTCTCCACAGAGCTCCGGGCGG...GGGAAGTATCCTGCAAGGGAGTGTCTGGGTGCGTGTCCCTTGTGAAGGAGTGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp CCATCTGCCTGTCTGATGTCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGATGGGGATGAGCAGGGGCTaGTTACCTGGGATCACCAGG +
Preference number: 4 (lower is better)
Translates to: PSACLMSPYNAWKLGSLMGMSRG*LPGITR
Trigger: CCTGGTGATCCCAGGTAACCAGCCCCTGCTCATCCC...CATCAGGGAACCCAGCTTCCAGGCATTGTAGGGAGACATCAGACAGGCAGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp GACCATTCCGCTCCAGAGTTCGTCCTAGGAGCCACTCCGCCTCCTGGCTCCATTGGTACTGCAGCAAACTaGGGTGATGACGTCACGATG +
Preference number: 4 (lower is better)
Translates to: DHSAPEFVLGATPPPGSIGTAAN*GDDVTM
Trigger: CATCGTGACGTCATCACCCCAGTTTGCTGCAGTACC...AATGGAGCCAGGAGGCGGAGTGGCTCCTAGGACGAACTCTGGAGCGGAATGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
CDS-3UTR CCA 90 bp CCTTGCAGACAATGCAAACGCACCAGTCTCCTGCGACACACCTGTTTGACTCTAGGCCTGCACCATGGCTaGGTAGGCAGCCTGGGTGAC +
Preference number: 4 (lower is better)
Translates to: PCRQCKRTSLLRHTCLTLGLHHG*VGSLGD
Trigger: GTCACCCAGGCTGCCTACCCAGCCATGGTGCAGGCC...TAGAGTCAAACAGGTGTGTCGCAGGAGACTGGTGCGTTTGCATTGTCTGCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp CTACAGTACAGTAATCTGGATACAGACAGTAAAAGGAGGCCCCGGGCCTCCGCTTGCACCACCGGCAGGTaGATCTGGGCCTGCACCATG +
Preference number: 4 (lower is better)
Translates to: LQYSNLDTDSKRRPRASACTTGR*IWACTM
Trigger: CATGGTGCAGGCCCAGATCCACCTGCCGGTGGTGCA...AGCGGAGGCCCGGGGCCTCCTTTTACTGTCTGTATCCAGATTACTGTACTGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp TCCTCCACCCACCAGCTCCTCAACAGACCCTTGCAGACAATGCAAACGCACCAGGATCAAAGAGCTGGCTaGTCCGCTCAGGACAGCAGG +
Preference number: 4 (lower is better)
Translates to: SSTHQLLNRPLQTMQTHQDQRAG*SAQDSR
Trigger: CCTGCTGTCCTGAGCGGACCAGCCAGCTCTTTGATC...CTGGTGCGTTTGCATTGTCTGCAAGGGTCTGTTGAGGAGCTGGTGGGTGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp TCCTCCACCCACCAGCTCCTCAACAGACCCTTGCAGACAATGCAAACGCACCAGGGCAGATCAAAGAGCTaGCTGGTCCGCTCAGGACAG +
Preference number: 4 (lower is better)
Translates to: SSTHQLLNRPLQTMQTHQGRSKS*LVRSGQ
Trigger: CTGTCCTGAGCGGACCAGCCAGCTCTTTGATCTGCC...CTGGTGCGTTTGCATTGTCTGCAAGGGTCTGTTGAGGAGCTGGTGGGTGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp CACTGCCGGAGAAGGCAGGGGCTGATGAAGCCACATTCAGGGCCACTAAGGATGGCAGGGTCCACAGGCTaGCCCTTTTTAACAGAGCCA +
Preference number: 4 (lower is better)
Translates to: HCRRRQGLMKPHSGPLRMAGSTG*PFLTEP
Trigger: TGGCTCTGTTAAAAAGGGCCAGCCTGTGGACCCTGC...CATCCTTAGTGGCCCTGAATGTGGCTTCATCAGCCCCTGCCTTCTCCGGCAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp CCTTGCAGACAATGCAAACGCACCAGTCTCCTGCGACACACCTGTTTGACTCTAGCTTCAGCAGGACGCTaGCAGGGTCCACAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: PCRQCKRTSLLRHTCLTLASAGR*QGPQAG
Trigger: GCCAGCCTGTGGACCCTGCCAGCGTCCTGCTGAAGC...TAGAGTCAAACAGGTGTGTCGCAGGAGACTGGTGCGTTTGCATTGTCTGCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp GCCTGGAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGAAACCCAGGTCCCCCATTCTCAGAGAGCACCTaGGCGCTTCCCTGGTTGATT +
Preference number: 4 (lower is better)
Translates to: AWKLGSLMTLQVGNPGPPFSEST*ALPWLI
Trigger: AATCAACCAGGGAAGCGCCCAGGTGCTCTCTGAGAA...TGGGGGACCTGGGTTTCCCACCTGCAAAGTCATCAGGGAACCCAGCTTCCAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR TCA 90 bp CTACAGTACAGTAATCTGGATACAGACAGTAAAAGGAGGCCCCGGGCCTCCGCTGACCACCAGCATAGGTaGTTGCTTGCTGCTGGCCGC +
Preference number: 4 (lower is better)
Translates to: LQYSNLDTDSKRRPRASADHQHR*LLAAGR
Trigger: GCGGCCAGCAGCAAGCAATCACCTATGCTGGTGGTC...AGCGGAGGCCCGGGGCCTCCTTTTACTGTCTGTATCCAGATTACTGTACTGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR GCA 90 bp CACTGCCGGAGAAGGCAGGGGCTGATGAAGCCACATTCAGGGCCACTAAGGATGGAGGCAGGCATTCGTTaGTCCGCTCTTGGTTGGATT +
Preference number: 4 (lower is better)
Translates to: HCRRRQGLMKPHSGPLRMEAGIR*SALGWI
Trigger: AATCCAACCAAGAGCGGAGCAACGAATGCCTGCCTC...CATCCTTAGTGGCCCTGAATGTGGCTTCATCAGCCCCTGCCTTCTCCGGCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR GCA 90 bp AATCTGGATACAGACAGTAAAAGGAGGCCCCGGGCCTCCGCTGCCCGCAAGGTCATGAACTGGAAGGTATaGGAAAGGTGGGCGTACTGC +
Preference number: 4 (lower is better)
Translates to: NLDTDSKRRPRASAARKVMNWKV*ERWAYC
Trigger: GCAGTACGCCCACCTTTCGCATACCTTCCAGTTCAT...GACCTTGCGGGCAGCGGAGGCCCGGGGCCTCCTTTTACTGTCTGTATCCAGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR GCA 90 bp GATGTCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGTGGATGTACTGGTTCTaGTGGGTGGGTGGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: DVSLQCLEAGFPDDFAGGWMYWF*WVGGGG
Trigger: CCCTCCTCCACCCACCCAGCAGAACCAGTACATCCA...CCCACCTGCAAAGTCATCAGGGAACCCAGCTTCCAGGCATTGTAGGGAGACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR GCA 90 bp ACCATCCTCCACCCACCAGCTCCTCAACAGACCCTTGCAGACAATGCAAACGCATGGATGTACTGGTTCTaGTGGGTGGGTGGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: TILHPPAPQQTLADNANAWMYWF*WVGGGG
Trigger: CCCTCCTCCACCCACCCAGCAGAACCAGTACATCCA...TGCGTTTGCATTGTCTGCAAGGGTCTGTTGAGGAGCTGGTGGGTGGAGGATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR GCA 90 bp ACCATCCTCCACCCACCAGCTCCTCAACAGACCCTTGCAGACAATGCAAACGCAGCTTGCATAGCCTGCTaGAACCTGCTGCTCTCGGCT +
Preference number: 4 (lower is better)
Translates to: TILHPPAPQQTLADNANAACIAC*NLLLSA
Trigger: AGCCGAGAGCAGCAGGTTGCAGCAGGCTATGCAAGC...TGCGTTTGCATTGTCTGCAAGGGTCTGTTGAGGAGCTGGTGGGTGGAGGATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR GCA 90 bp CGCACTCCTTCACAAGGGACACGCACCCAGACACTCCCTTGCAGGATACTTCCCAGGACTTCCTTGGCTTaGATAGCCTGCTGCAACCTG +
Preference number: 4 (lower is better)
Translates to: RTPSQGTRTQTLPCRILPRTSLA*IACCNL
Trigger: CAGGTTGCAGCAGGCTATGCAAGCCAAGGAAGTCCT...GGGAAGTATCCTGCAAGGGAGTGTCTGGGTGCGTGTCCCTTGTGAAGGAGTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR GCA 90 bp TTCCCATCTGCCTGTCTGATGTCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGACGACTGCTGTAGTCTaGTGGGCTTGGGTGGACCAC +
Preference number: 4 (lower is better)
Translates to: FPSACLMSPYNAWKLGSLTTAVV*WAWVDH
Trigger: GTGGTCCACCCAAGCCCAGCAGACTACAGCAGTCGT...CAGGGAACCCAGCTTCCAGGCATTGTAGGGAGACATCAGACAGGCAGATGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR GCA 90 bp CTACAATGCCTGGAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGAAACCCAGGCTGTCGGTCTTTGCCTaGTTCAGCAGGACGCTGGCA +
Preference number: 4 (lower is better)
Translates to: LQCLEAGFPDDFAGGKPRLSVFA*FSRTLA
Trigger: TGCCAGCGTCCTGCTGAAGCAGGCAAAGACCGACAG...CCTGGGTTTCCCACCTGCAAAGTCATCAGGGAACCCAGCTTCCAGGCATTGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp CGCACTCCTTCACAAGGGACACGCACCCAGACACTCCCTTGCAGGATACTTCCCGGATCTCACGTTTCTTaGGAGGCAGGCATTCGTTGC +
Preference number: 4 (lower is better)
Translates to: RTPSQGTRTQTLPCRILPGSHVS*EAGIRC
Trigger: GCAACGAATGCCTGCCTCCCAAGAAACGTGAGATCC...GGGAAGTATCCTGCAAGGGAGTGTCTGGGTGCGTGTCCCTTGTGAAGGAGTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp CTACAGTACAGTAATCTGGATACAGACAGTAAAAGGAGGCCCCGGGCCTCCGCTCGCAGTGGTTGTCGCTaGGCAGAGCAGTGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: LQYSNLDTDSKRRPRASARSGCR*AEQWPS
Trigger: AGAAGGCCACTGCTCTGCCCAGCGACAACCACTGCG...AGCGGAGGCCCGGGGCCTCCTTTTACTGTCTGTATCCAGATTACTGTACTGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp TTCCCATCTGCCTGTCTGATGTCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGTGTTGGCCAGCAGGGTaGAATAAGCCTCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: FPSACLMSPYNAWKLGSLCWPAG*NKPPAG
Trigger: CCCAGCTGGAGGCTTATTCCACCCTGCTGGCCAACA...CAGGGAACCCAGCTTCCAGGCATTGTAGGGAGACATCAGACAGGCAGATGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp GATGTCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGTGTTGGCCAGCAGGGTaGAATAAGCCTCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: DVSLQCLEAGFPDDFAGGCWPAG*NKPPAG
Trigger: CCCAGCTGGAGGCTTATTCCACCCTGCTGGCCAACA...CCCACCTGCAAAGTCATCAGGGAACCCAGCTTCCAGGCATTGTAGGGAGACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp CCATCTGCCTGTCTGATGTCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGATGATGTACTGGTTCTGCTaGGTGGGTGGAGGAGGGGAC +
Preference number: 4 (lower is better)
Translates to: PSACLMSPYNAWKLGSLMMYWFC*VGGGGD
Trigger: GTCCCCTCCTCCACCCACCCAGCAGAACCAGTACAT...CATCAGGGAACCCAGCTTCCAGGCATTGTAGGGAGACATCAGACAGGCAGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp GACCATCCTCCACCCACCAGCTCCTCAACAGACCCTTGCAGACAATGCAAACGCCCGCCCGGAGCTCTGTaGAGAGCTGGAAATATGGAT +
Preference number: 4 (lower is better)
Translates to: DHPPPTSSSTDPCRQCKRPPGAL*RAGNMD
Trigger: ATCCATATTTCCAGCTCTCCACAGAGCTCCGGGCGG...GCGTTTGCATTGTCTGCAAGGGTCTGTTGAGGAGCTGGTGGGTGGAGGATGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp CTTGCAGGATACTTCCCACTGTGTTTGTTCTTGAAACCAGTGGGAACTGATGCCGGAGGTGGACCGGGATaGGTGGGGGAGATGTCGCCC +
Preference number: 4 (lower is better)
Translates to: LAGYFPLCLFLKPVGTDAGGGPG*VGEMSP
Trigger: GGGCGACATCTCCCCCACCCATCCCGGTCCACCTCC...GGCATCAGTTCCCACTGGTTTCAAGAACAAACACAGTGGGAAGTATCCTGCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp TACTTAGCCTACAGTACAGTAATCTGGATACAGACAGTAAAAGGAGGCCCCGGGGGAGGTGGACCGGGATaGGTGGGGGAGATGTCGCCC +
Preference number: 4 (lower is better)
Translates to: YLAYSTVIWIQTVKGGPGGGGPG*VGEMSP
Trigger: GGGCGACATCTCCCCCACCCATCCCGGTCCACCTCC...CCCGGGGCCTCCTTTTACTGTCTGTATCCAGATTACTGTACTGTAGGCTAAGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp CTACAATGCCTGGAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGAAACCCAGGGTAGTCTGCTGGGCTTaGGTGGACCACCACATGCCT +
Preference number: 4 (lower is better)
Translates to: LQCLEAGFPDDFAGGKPRVVCWA*VDHHMP
Trigger: AGGCATGTGGTGGTCCACCCAAGCCCAGCAGACTAC...CCTGGGTTTCCCACCTGCAAAGTCATCAGGGAACCCAGCTTCCAGGCATTGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp ACCATCCTCCACCCACCAGCTCCTCAACAGACCCTTGCAGACAATGCAAACGCAGTAGTCTGCTGGGCTTaGGTGGACCACCACATGCCT +
Preference number: 4 (lower is better)
Translates to: TILHPPAPQQTLADNANAVVCWA*VDHHMP
Trigger: AGGCATGTGGTGGTCCACCCAAGCCCAGCAGACTAC...TGCGTTTGCATTGTCTGCAAGGGTCTGTTGAGGAGCTGGTGGGTGGAGGATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp TCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGAAACGGGATGAGCAGGGGCTaGTTACCTGGGATCACCAGG +
Preference number: 4 (lower is better)
Translates to: SPYNAWKLGSLMTLQVGNGMSRG*LPGITR
Trigger: CCTGGTGATCCCAGGTAACCAGCCCCTGCTCATCCC...GTTTCCCACCTGCAAAGTCATCAGGGAACCCAGCTTCCAGGCATTGTAGGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp CTACAATGCCTGGAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGAAACCCAGGGATCAAAGAGCTGGCTaGTCCGCTCAGGACAGCAGG +
Preference number: 4 (lower is better)
Translates to: LQCLEAGFPDDFAGGKPRDQRAG*SAQDSR
Trigger: CCTGCTGTCCTGAGCGGACCAGCCAGCTCTTTGATC...CCTGGGTTTCCCACCTGCAAAGTCATCAGGGAACCCAGCTTCCAGGCATTGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp TTCCCATCTGCCTGTCTGATGTCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGGGCAGATCAAAGAGCTaGCTGGTCCGCTCAGGACAG +
Preference number: 4 (lower is better)
Translates to: FPSACLMSPYNAWKLGSLGRSKS*LVRSGQ
Trigger: CTGTCCTGAGCGGACCAGCCAGCTCTTTGATCTGCC...CAGGGAACCCAGCTTCCAGGCATTGTAGGGAGACATCAGACAGGCAGATGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp GACCATCCTCCACCCACCAGCTCCTCAACAGACCCTTGCAGACAATGCAAACGCGGGAAGAGTCAAAGGTaGCTCGTCCTCCGACTTCTC +
Preference number: 4 (lower is better)
Translates to: DHPPPTSSSTDPCRQCKRGKSQR*LVLRLL
Trigger: GAGAAGTCGGAGGACGAGCCACCTTTGACTCTTCCC...GCGTTTGCATTGTCTGCAAGGGTCTGTTGAGGAGCTGGTGGGTGGAGGATGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
3UTR CAA 72 bp GGTGACGGACCTTCAAAGTGCTTCCCTCAGGTCTCCTaGGCTGGCTCTCACTGTGTCCTGGTGACAGACACA +
Preference number: 4 (lower is better)
Translates to: GDGPSKCFPQVS*AGSHCVLVTDT
Trigger: TGTGTCTGTCACCAGGACACAGTGAGAGCCAGCCAAGGAGACCTGAGGGAAGCACTTTGAAGGTCCGTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
CDS-3UTR TCA 90 bp CTACAGTACAGTAATCTGGATACAGACAGTAAAAGGAGGCCCCGGGCCTCCGCTCCAGAGCCTCTGGGTTaGAGTTCTCGCTCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: LQYSNLDTDSKRRPRASAPEPLG*SSRSWA
Trigger: TGCCCAAGAGCGAGAACTTCAACCCAGAGGCTCTGG...AGCGGAGGCCCGGGGCCTCCTTTTACTGTCTGTATCCAGATTACTGTACTGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR TCA 90 bp GACCATCCTCCACCCACCAGCTCCTCAACAGACCCTTGCAGACAATGCAAACGCTCGGTTCTATTTTGCTaGGGAAGGGTGCTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: DHPPPTSSSTDPCRQCKRSVLFC*GRVLQA
Trigger: TGCCTGCAGCACCCTTCCTCAGCAAAATAGAACCGA...GCGTTTGCATTGTCTGCAAGGGTCTGTTGAGGAGCTGGTGGGTGGAGGATGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR GCA 90 bp TCCTCCACCCACCAGCTCCTCAACAGACCCTTGCAGACAATGCAAACGCACCAGGAGGCAGGCATTCGTTaGTCCGCTCTTGGTTGGATT +
Preference number: 4 (lower is better)
Translates to: SSTHQLLNRPLQTMQTHQEAGIR*SALGWI
Trigger: AATCCAACCAAGAGCGGAGCAACGAATGCCTGCCTC...CTGGTGCGTTTGCATTGTCTGCAAGGGTCTGTTGAGGAGCTGGTGGGTGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR GCA 90 bp CTCAACAGACCCTTGCAGACAATGCAAACGCACCAGTCTCCTGCGACACACCTGTTGGCTTGCATAGCCTaGTGCAACCTGCTGCTCTCG +
Preference number: 4 (lower is better)
Translates to: LNRPLQTMQTHQSPATHLLACIA*CNLLLS
Trigger: CGAGAGCAGCAGGTTGCAGCAGGCTATGCAAGCCAA...CAGGTGTGTCGCAGGAGACTGGTGCGTTTGCATTGTCTGCAAGGGTCTGTTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR GCA 90 bp CACTCCTTCACAAGGGACACGCACCCAGACACTCCCTTGCAGGATACTTCCCACAGGACTTCCTTGGCTTaGATAGCCTGCTGCAACCTG +
Preference number: 4 (lower is better)
Translates to: HSFTRDTHPDTPLQDTSHRTSLA*IACCNL
Trigger: CAGGTTGCAGCAGGCTATGCAAGCCAAGGAAGTCCT...GTGGGAAGTATCCTGCAAGGGAGTGTCTGGGTGCGTGTCCCTTGTGAAGGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR GCA 90 bp TCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGAAACCAGGCTGTCGGTCTTTaGCTGCTTCAGCAGGACGCT +
Preference number: 4 (lower is better)
Translates to: SPYNAWKLGSLMTLQVGNQAVGL*LLQQDA
Trigger: AGCGTCCTGCTGAAGCAGGCAAAGACCGACAGCCTG...GTTTCCCACCTGCAAAGTCATCAGGGAACCCAGCTTCCAGGCATTGTAGGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR GCA 90 bp CTACAGTACAGTAATCTGGATACAGACAGTAAAAGGAGGCCCCGGGCCTCCGCTCAGGCTGTCGGTCTTTaGCTGCTTCAGCAGGACGCT +
Preference number: 4 (lower is better)
Translates to: LQYSNLDTDSKRRPRASAQAVGL*LLQQDA
Trigger: AGCGTCCTGCTGAAGCAGGCAAAGACCGACAGCCTG...AGCGGAGGCCCGGGGCCTCCTTTTACTGTCTGTATCCAGATTACTGTACTGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR GCA 90 bp ATGTCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGACGTATCTGTGTCTGCTaGCAGCCAGGCTGTCGGTCT +
Preference number: 4 (lower is better)
Translates to: MSPYNAWKLGSLMTLQVGRICVC*QPGCRS
Trigger: AGACCGACAGCCTGGCTGGCAGCAGACACAGATACG...TCCCACCTGCAAAGTCATCAGGGAACCCAGCTTCCAGGCATTGTAGGGAGACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp CTTGCAGGATACTTCCCACTGTGTTTGTTCTTGAAACCAGTGGGAACTGATGCCCCTGGGGGCACTGGGTaGGGAGTAATCCAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: LAGYFPLCLFLKPVGTDAPGGTG*GVIQPC
Trigger: GCAGGGCTGGATTACTCCCCACCCAGTGCCCCCAGG...GGCATCAGTTCCCACTGGTTTCAAGAACAAACACAGTGGGAAGTATCCTGCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp TCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGAAACTGTTGGCCAGCAGGGTaGAATAAGCCTCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: SPYNAWKLGSLMTLQVGNCWPAG*NKPPAG
Trigger: CCCAGCTGGAGGCTTATTCCACCCTGCTGGCCAACA...GTTTCCCACCTGCAAAGTCATCAGGGAACCCAGCTTCCAGGCATTGTAGGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp TTCCCATCTGCCTGTCTGATGTCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGCCGCCCGGAGCTCTGTaGAGAGCTGGAAATATGGAT +
Preference number: 4 (lower is better)
Translates to: FPSACLMSPYNAWKLGSLPPGAL*RAGNMD
Trigger: ATCCATATTTCCAGCTCTCCACAGAGCTCCGGGCGG...CAGGGAACCCAGCTTCCAGGCATTGTAGGGAGACATCAGACAGGCAGATGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp GCCTGGAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGAAACCCAGGTCCCCCATCTCGAGGAACAAAGTaGCCTCCGGCATCACTATAT +
Preference number: 4 (lower is better)
Translates to: AWKLGSLMTLQVGNPGPPSRGTK*PPASLY
Trigger: ATATAGTGATGCCGGAGGCCACTTTGTTCCTCGAGA...TGGGGGACCTGGGTTTCCCACCTGCAAAGTCATCAGGGAACCCAGCTTCCAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp AAGGCAGGGGCTGATGAAGCCACATTCAGGGCCACTAAGGATGCCCGGGAGCTCTCTCGAGGAACAAAGTaGCCTCCGGCATCACTATAT +
Preference number: 4 (lower is better)
Translates to: KAGADEATFRATKDARELSRGTK*PPASLY
Trigger: ATATAGTGATGCCGGAGGCCACTTTGTTCCTCGAGA...GAGCTCCCGGGCATCCTTAGTGGCCCTGAATGTGGCTTCATCAGCCCCTGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp ATGTCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGAACTGCTGTAGTCTGCTaGGCTTGGGTGGACCACCAC +
Preference number: 4 (lower is better)
Translates to: MSPYNAWKLGSLMTLQVGTAVVC*AWVDHH
Trigger: GTGGTGGTCCACCCAAGCCCAGCAGACTACAGCAGT...TCCCACCTGCAAAGTCATCAGGGAACCCAGCTTCCAGGCATTGTAGGGAGACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp CTACAGTACAGTAATCTGGATACAGACAGTAAAAGGAGGCCCCGGGCCTCCGCTACTGCTGTAGTCTGCTaGGCTTGGGTGGACCACCAC +
Preference number: 4 (lower is better)
Translates to: LQYSNLDTDSKRRPRASATAVVC*AWVDHH
Trigger: GTGGTGGTCCACCCAAGCCCAGCAGACTACAGCAGT...AGCGGAGGCCCGGGGCCTCCTTTTACTGTCTGTATCCAGATTACTGTACTGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp TACTTAGCCTACAGTACAGTAATCTGGATACAGACAGTAAAAGGAGGCCCCGGGCAGCGTAGAAGGCCGTaGCTGGTAGGCCCACCGGGA +
Preference number: 4 (lower is better)
Translates to: YLAYSTVIWIQTVKGGPGQRRRP*LVGPPG
Trigger: TCCCGGTGGGCCTACCAGCCACGGCCTTCTACGCTG...CCCGGGGCCTCCTTTTACTGTCTGTATCCAGATTACTGTACTGTAGGCTAAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp CTTGCAGGATACTTCCCACTGTGTTTGTTCTTGAAACCAGTGGGAACTGATGCCCAGCGTAGAAGGCCGTaGCTGGTAGGCCCACCGGGA +
Preference number: 4 (lower is better)
Translates to: LAGYFPLCLFLKPVGTDAQRRRP*LVGPPG
Trigger: TCCCGGTGGGCCTACCAGCCACGGCCTTCTACGCTG...GGCATCAGTTCCCACTGGTTTCAAGAACAAACACAGTGGGAAGTATCCTGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp CACTCCTTCACAAGGGACACGCACCCAGACACTCCCTTGCAGGATACTTCCCACGGTACTGCAGCAAACTaGGGTGATGACGTCACGATG +
Preference number: 4 (lower is better)
Translates to: HSFTRDTHPDTPLQDTSHGTAAN*GDDVTM
Trigger: CATCGTGACGTCATCACCCCAGTTTGCTGCAGTACC...GTGGGAAGTATCCTGCAAGGGAGTGTCTGGGTGCGTGTCCCTTGTGAAGGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp CCATCTGCCTGTCTGATGTCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGATGACCTGGGCGCTTCCCTaGTTGATTCCGTTTTCCTGC +
Preference number: 4 (lower is better)
Translates to: PSACLMSPYNAWKLGSLMTWALP*LIPFSC
Trigger: GCAGGAAAACGGAATCAACCAGGGAAGCGCCCAGGT...CATCAGGGAACCCAGCTTCCAGGCATTGTAGGGAGACATCAGACAGGCAGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp TTCCCATCTGCCTGTCTGATGTCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGACCTGGGCGCTTCCCTaGTTGATTCCGTTTTCCTGC +
Preference number: 4 (lower is better)
Translates to: FPSACLMSPYNAWKLGSLTWALP*LIPFSC
Trigger: GCAGGAAAACGGAATCAACCAGGGAAGCGCCCAGGT...CAGGGAACCCAGCTTCCAGGCATTGTAGGGAGACATCAGACAGGCAGATGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp GACCATCCTCCACCCACCAGCTCCTCAACAGACCCTTGCAGACAATGCAAACGCTTCTCAGAGAGCACCTaGGCGCTTCCCTGGTTGATT +
Preference number: 4 (lower is better)
Translates to: DHPPPTSSSTDPCRQCKRFSEST*ALPWLI
Trigger: AATCAACCAGGGAAGCGCCCAGGTGCTCTCTGAGAA...GCGTTTGCATTGTCTGCAAGGGTCTGTTGAGGAGCTGGTGGGTGGAGGATGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR TCA 90 bp CCATCTGCCTGTCTGATGTCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGATGGTGGTGACAAACGTGTaGGGTACTGCAGCAAACTGG +
Preference number: 4 (lower is better)
Translates to: PSACLMSPYNAWKLGSLMVVTNV*GTAANW
Trigger: CCAGTTTGCTGCAGTACCTCACACGTTTGTCACCAC...CATCAGGGAACCCAGCTTCCAGGCATTGTAGGGAGACATCAGACAGGCAGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR TCA 90 bp CTACAATGCCTGGAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGAAACCCAGGTCGGTTCTATTTTGCTaGGGAAGGGTGCTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: LQCLEAGFPDDFAGGKPRSVLFC*GRVLQA
Trigger: TGCCTGCAGCACCCTTCCTCAGCAAAATAGAACCGA...CCTGGGTTTCCCACCTGCAAAGTCATCAGGGAACCCAGCTTCCAGGCATTGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR TCA 90 bp CACTCCTTCACAAGGGACACGCACCCAGACACTCCCTTGCAGGATACTTCCCACCAGATCTTAACCTCCTaGGGAATGAGCGAAGGCTTG +
Preference number: 4 (lower is better)
Translates to: HSFTRDTHPDTPLQDTSHQILTS*GMSEGL
Trigger: CAAGCCTTCGCTCATTCCTCAGGAGGTTAAGATCTG...GTGGGAAGTATCCTGCAAGGGAGTGTCTGGGTGCGTGTCCCTTGTGAAGGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR GCA 90 bp GACCATCCTCCACCCACCAGCTCCTCAACAGACCCTTGCAGACAATGCAAACGCATGAACTGGAAGGTATaGGAAAGGTGGGCGTACTGC +
Preference number: 4 (lower is better)
Translates to: DHPPPTSSSTDPCRQCKRMNWKV*ERWAYC
Trigger: GCAGTACGCCCACCTTTCGCATACCTTCCAGTTCAT...GCGTTTGCATTGTCTGCAAGGGTCTGTTGAGGAGCTGGTGGGTGGAGGATGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR GCA 90 bp ACCATCCTCCACCCACCAGCTCCTCAACAGACCCTTGCAGACAATGCAAACGCAAACCTTATGTCCTGGTaGCTGGCTCAGACTGCCCAT +
Preference number: 4 (lower is better)
Translates to: TILHPPAPQQTLADNANANLMSW*LAQTAH
Trigger: ATGGGCAGTCTGAGCCAGGCACCAGGACATAAGGTT...TGCGTTTGCATTGTCTGCAAGGGTCTGTTGAGGAGCTGGTGGGTGGAGGATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR GCA 90 bp TGCCTGTCTGATGTCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGATGACTTTACGACTGCTGTAGTCTaGTGGGCTTGGGTGGACCAC +
Preference number: 4 (lower is better)
Translates to: CLSDVSLQCLEAGFPDDFTTAVV*WAWVDH
Trigger: GTGGTCCACCCAAGCCCAGCAGACTACAGCAGTCGT...AAAGTCATCAGGGAACCCAGCTTCCAGGCATTGTAGGGAGACATCAGACAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp CCATCTGCCTGTCTGATGTCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGATGGGATCTCACGTTTCTTaGGAGGCAGGCATTCGTTGC +
Preference number: 4 (lower is better)
Translates to: PSACLMSPYNAWKLGSLMGSHVS*EAGIRC
Trigger: GCAACGAATGCCTGCCTCCCAAGAAACGTGAGATCC...CATCAGGGAACCCAGCTTCCAGGCATTGTAGGGAGACATCAGACAGGCAGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp ACCATCCTCCACCCACCAGCTCCTCAACAGACCCTTGCAGACAATGCAAACGCAGGATCTCACGTTTCTTaGGAGGCAGGCATTCGTTGC +
Preference number: 4 (lower is better)
Translates to: TILHPPAPQQTLADNANAGSHVS*EAGIRC
Trigger: GCAACGAATGCCTGCCTCCCAAGAAACGTGAGATCC...TGCGTTTGCATTGTCTGCAAGGGTCTGTTGAGGAGCTGGTGGGTGGAGGATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp CTCAACAGACCCTTGCAGACAATGCAAACGCACCAGTCTCCTGCGACACACCTGTCAGACTGCCCATGTTaGCCAGCAGGGTGGAATAAG +
Preference number: 4 (lower is better)
Translates to: LNRPLQTMQTHQSPATHLSDCPC*PAGWNK
Trigger: CTTATTCCACCCTGCTGGCCAACATGGGCAGTCTGA...CAGGTGTGTCGCAGGAGACTGGTGCGTTTGCATTGTCTGCAAGGGTCTGTTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp GATGTCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGTCAGACTGCCCATGTTaGCCAGCAGGGTGGAATAAG +
Preference number: 4 (lower is better)
Translates to: DVSLQCLEAGFPDDFAGGSDCPC*PAGWNK
Trigger: CTTATTCCACCCTGCTGGCCAACATGGGCAGTCTGA...CCCACCTGCAAAGTCATCAGGGAACCCAGCTTCCAGGCATTGTAGGGAGACATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp AATCTGGATACAGACAGTAAAAGGAGGCCCCGGGCCTCCGCTGCCCGCAAGGTCAGCTCTGTGGAGAGCTaGAAATATGGATGTACTGGT +
Preference number: 4 (lower is better)
Translates to: NLDTDSKRRPRASAARKVSSVES*KYGCTG
Trigger: ACCAGTACATCCATATTTCCAGCTCTCCACAGAGCT...GACCTTGCGGGCAGCGGAGGCCCGGGGCCTCCTTTTACTGTCTGTATCCAGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp CACTGCCGGAGAAGGCAGGGGCTGATGAAGCCACATTCAGGGCCACTAAGGATGTCTCGAGGAACAAAGTaGCCTCCGGCATCACTATAT +
Preference number: 4 (lower is better)
Translates to: HCRRRQGLMKPHSGPLRMSRGTK*PPASLY
Trigger: ATATAGTGATGCCGGAGGCCACTTTGTTCCTCGAGA...CATCCTTAGTGGCCCTGAATGTGGCTTCATCAGCCCCTGCCTTCTCCGGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp CTACAATGCCTGGAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGAAACCCAGGGGTGACCAGAGCCTCTaGGTTGAAGTTCTCGCTCTT +
Preference number: 4 (lower is better)
Translates to: LQCLEAGFPDDFAGGKPRGDQSL*VEVLAL
Trigger: AAGAGCGAGAACTTCAACCCAGAGGCTCTGGTCACC...CCTGGGTTTCCCACCTGCAAAGTCATCAGGGAACCCAGCTTCCAGGCATTGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR TCA 90 bp CTTGCAGGATACTTCCCACTGTGTTTGTTCTTGAAACCAGTGGGAACTGATGCCATGAAGGCCCCAGGGTaGGTGTGTGCGGGATCATCG +
Preference number: 4 (lower is better)
Translates to: LAGYFPLCLFLKPVGTDAMKAPG*VCAGSS
Trigger: CGATGATCCCGCACACACTCACCCTGGGGCCTTCAT...GGCATCAGTTCCCACTGGTTTCAAGAACAAACACAGTGGGAAGTATCCTGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR TCA 90 bp CTTGCAGGATACTTCCCACTGTGTTTGTTCTTGAAACCAGTGGGAACTGATGCCCACAACCACCTGGGATaGAGGCCCCAGGGTGAGTGT +
Preference number: 4 (lower is better)
Translates to: LAGYFPLCLFLKPVGTDAHNHLG*RPQGEC
Trigger: ACACTCACCCTGGGGCCTTCATCCCAGGTGGTTGTG...GGCATCAGTTCCCACTGGTTTCAAGAACAAACACAGTGGGAAGTATCCTGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR TCA 90 bp TCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGAAACGTGGTGACAAACGTGTaGGGTACTGCAGCAAACTGG +
Preference number: 4 (lower is better)
Translates to: SPYNAWKLGSLMTLQVGNVVTNV*GTAANW
Trigger: CCAGTTTGCTGCAGTACCTCACACGTTTGTCACCAC...GTTTCCCACCTGCAAAGTCATCAGGGAACCCAGCTTCCAGGCATTGTAGGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR TCA 90 bp GAGGACATGCGTGGATGGAGTCTCCAAGTGATCTGTAGTGGAAGACTTAACTCCCCAGAGCCTCTGGGTTaGAGTTCTCGCTCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: EDMRGWSLQVICSGRLNSPEPLG*SSRSWA
Trigger: TGCCCAAGAGCGAGAACTTCAACCCAGAGGCTCTGG...GGAGTTAAGTCTTCCACTACAGATCACTTGGAGACTCCATCCACGCATGTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
CDS-3UTR TCA 90 bp ACCATCCTCCACCCACCAGCTCCTCAACAGACCCTTGCAGACAATGCAAACGCACAGATCTTAACCTCCTaGGGAATGAGCGAAGGCTTG +
Preference number: 4 (lower is better)
Translates to: TILHPPAPQQTLADNANAQILTS*GMSEGL
Trigger: CAAGCCTTCGCTCATTCCTCAGGAGGTTAAGATCTG...TGCGTTTGCATTGTCTGCAAGGGTCTGTTGAGGAGCTGGTGGGTGGAGGATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR GCA 90 bp CTACAGTACAGTAATCTGGATACAGACAGTAAAAGGAGGCCCCGGGCCTCCGCTAACCTTATGTCCTGGTaGCTGGCTCAGACTGCCCAT +
Preference number: 4 (lower is better)
Translates to: LQYSNLDTDSKRRPRASANLMSW*LAQTAH
Trigger: ATGGGCAGTCTGAGCCAGGCACCAGGACATAAGGTT...AGCGGAGGCCCGGGGCCTCCTTTTACTGTCTGTATCCAGATTACTGTACTGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR GCA 90 bp CTACAGTACAGTAATCTGGATACAGACAGTAAAAGGAGGCCCCGGGCCTCCGCTAGGACTTCCTTGGCTTaGATAGCCTGCTGCAACCTG +
Preference number: 4 (lower is better)
Translates to: LQYSNLDTDSKRRPRASARTSLA*IACCNL
Trigger: CAGGTTGCAGCAGGCTATGCAAGCCAAGGAAGTCCT...AGCGGAGGCCCGGGGCCTCCTTTTACTGTCTGTATCCAGATTACTGTACTGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR GCA 90 bp GAGGTGTGGAAGGTTCTGCAGGGTTCCTTGCAAGGGAGAAAGGACGCTGCCACTTTGATTCCGTTTTCCTaGTCCGCGTATCTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: EVWKVLQGSLQGRKDAATLIPFS*SAYLCL
Trigger: CAGACACAGATACGCGGAGCAGGAAAACGGAATCAA...AGTGGCAGCGTCCTTTCTCCCTTGCAAGGAACCCTGCAGAACCTTCCACACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
CDS-3UTR CCA 90 bp CTTGCAGGATACTTCCCACTGTGTTTGTTCTTGAAACCAGTGGGAACTGATGCCACACCCTCCACGCAGTaGTTGTCGCTGGGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: LAGYFPLCLFLKPVGTDATPSTQ*LSLGRA
Trigger: TGCTCTGCCCAGCGACAACCACTGCGTGGAGGGTGT...GGCATCAGTTCCCACTGGTTTCAAGAACAAACACAGTGGGAAGTATCCTGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp GATGTCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGGAGGACCCAATGAACTaGAAGGTATGCGAAAGGTGG +
Preference number: 4 (lower is better)
Translates to: DVSLQCLEAGFPDDFAGGEDPMN*KVCERW
Trigger: CCACCTTTCGCATACCTTCCAGTTCATTGGGTCCTC...CCCACCTGCAAAGTCATCAGGGAACCCAGCTTCCAGGCATTGTAGGGAGACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp CTACAGTACAGTAATCTGGATACAGACAGTAAAAGGAGGCCCCGGGCCTCCGCTGGTACTGCAGCAAACTaGGGTGATGACGTCACGATG +
Preference number: 4 (lower is better)
Translates to: LQYSNLDTDSKRRPRASAGTAAN*GDDVTM
Trigger: CATCGTGACGTCATCACCCCAGTTTGCTGCAGTACC...AGCGGAGGCCCGGGGCCTCCTTTTACTGTCTGTATCCAGATTACTGTACTGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
3UTR CAA 72 bp CACTCCCTTGCAGGATACTTCCCACTGTGTTTGTTCTaGAAACCAGTGGGAACTGATGCCCCTCGACTCTGC +
Preference number: 4 (lower is better)
Translates to: HSLAGYFPLCLF*KPVGTDAPRLC
Trigger: GCAGAGTCGAGGGGCATCAGTTCCCACTGGTTTCAAGAACAAACACAGTGGGAAGTATCCTGCAAGGGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
3UTR CAA 72 bp CCCAGACACTCCCTTGCAGGATACTTCCCACTGTGTTaGTTCTTGAAACCAGTGGGAACTGATGCCCCTCGA +
Preference number: 4 (lower is better)
Translates to: PRHSLAGYFPLC*FLKPVGTDAPR
Trigger: TCGAGGGGCATCAGTTCCCACTGGTTTCAAGAACAAACACAGTGGGAAGTATCCTGCAAGGGAGTGTCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
3UTR CAA 72 bp TCTCGAGAGAGAGAGCAGACCAGTTGGTTGAGGGTCTaGTGGCTCAGGAAACAGTTGCCATGCCAACTCAAC +
Preference number: 4 (lower is better)
Translates to: SREREQTSWLRV*WLRKQLPCQLN
Trigger: GTTGAGTTGGCATGGCAACTGTTTCCTGAGCCACAAGACCCTCAACCAACTGGTCTGCTCTCTCTCTCGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
CDS-3UTR TCA 90 bp TCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGAAACCAGATCTTAACCTCCTaGGGAATGAGCGAAGGCTTG +
Preference number: 4 (lower is better)
Translates to: SPYNAWKLGSLMTLQVGNQILTS*GMSEGL
Trigger: CAAGCCTTCGCTCATTCCTCAGGAGGTTAAGATCTG...GTTTCCCACCTGCAAAGTCATCAGGGAACCCAGCTTCCAGGCATTGTAGGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR GCA 90 bp TGCCTGTCTGATGTCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGATGACTTTAACCTTATGTCCTGGTaGCTGGCTCAGACTGCCCAT +
Preference number: 4 (lower is better)
Translates to: CLSDVSLQCLEAGFPDDFNLMSW*LAQTAH
Trigger: ATGGGCAGTCTGAGCCAGGCACCAGGACATAAGGTT...AAAGTCATCAGGGAACCCAGCTTCCAGGCATTGTAGGGAGACATCAGACAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR GCA 90 bp GTTGGGGAGGGGGCAGTAGTCACAGAATGGGACTGTGGTGGGTTGCCATGGTTATTTGCTGAGGAAGGGTaGTGCAGGCAATCCTATTTT +
Preference number: 4 (lower is better)
Translates to: VGEGAVVTEWDCGGLPWLFAEEG*CRQSYF
Trigger: AAAATAGGATTGCCTGCAGCACCCTTCCTCAGCAAA...TAACCATGGCAACCCACCACAGTCCCATTCTGTGACTACTGCCCCCTCCCCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
CDS-3UTR CCA 90 bp AAATCGCAAAGTTCTTTAGAAGTTCGTCCTAAAAACACTGGACACAACCGAGTGCGCTGGGCAGAGCAGTaGCCTTCTCCTCCGAGGGCC +
Preference number: 4 (lower is better)
Translates to: KSQSSLEVRPKNTGHNRVRWAEQ*PSPPRA
Trigger: GGCCCTCGGAGGAGAAGGCCACTGCTCTGCCCAGCG...CACTCGGTTGTGTCCAGTGTTTTTAGGACGAACTTCTAAAGAACTTTGCGATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
CDS-3UTR CCA 90 bp CTTGCAGGATACTTCCCACTGTGTTTGTTCTTGAAACCAGTGGGAACTGATGCCATGTACTGGTTCTGCTaGGTGGGTGGAGGAGGGGAC +
Preference number: 4 (lower is better)
Translates to: LAGYFPLCLFLKPVGTDAMYWFC*VGGGGD
Trigger: GTCCCCTCCTCCACCCACCCAGCAGAACCAGTACAT...GGCATCAGTTCCCACTGGTTTCAAGAACAAACACAGTGGGAAGTATCCTGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp ACCATCCTCCACCCACCAGCTCCTCAACAGACCCTTGCAGACAATGCAAACGCAGGAGAGCTGGAAATATaGATGTACTGGTTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: TILHPPAPQQTLADNANAGELEI*MYWFCW
Trigger: CCAGCAGAACCAGTACATCCATATTTCCAGCTCTCC...TGCGTTTGCATTGTCTGCAAGGGTCTGTTGAGGAGCTGGTGGGTGGAGGATGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp CTTGCAGGATACTTCCCACTGTGTTTGTTCTTGAAACCAGTGGGAACTGATGCCGTAGTCTGCTGGGCTTaGGTGGACCACCACATGCCT +
Preference number: 4 (lower is better)
Translates to: LAGYFPLCLFLKPVGTDAVVCWA*VDHHMP
Trigger: AGGCATGTGGTGGTCCACCCAAGCCCAGCAGACTAC...GGCATCAGTTCCCACTGGTTTCAAGAACAAACACAGTGGGAAGTATCCTGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp CTTGCAGGATACTTCCCACTGTGTTTGTTCTTGAAACCAGTGGGAACTGATGCCACTGCTGTAGTCTGCTaGGCTTGGGTGGACCACCAC +
Preference number: 4 (lower is better)
Translates to: LAGYFPLCLFLKPVGTDATAVVC*AWVDHH
Trigger: GTGGTGGTCCACCCAAGCCCAGCAGACTACAGCAGT...GGCATCAGTTCCCACTGGTTTCAAGAACAAACACAGTGGGAAGTATCCTGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp ACTAGTTTCCCATCTGCCTGTCTGATGTCTCCCTACAATGCCTGGAAGCTGGGTGGTGACCAGAGCCTCTaGGTTGAAGTTCTCGCTCTT +
Preference number: 4 (lower is better)
Translates to: TSFPSACLMSPYNAWKLGGDQSL*VEVLAL
Trigger: AAGAGCGAGAACTTCAACCCAGAGGCTCTGGTCACC...ACCCAGCTTCCAGGCATTGTAGGGAGACATCAGACAGGCAGATGGGAAACTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp TGCCTGTCTGATGTCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGATGACTTTGGTGACCAGAGCCTCTaGGTTGAAGTTCTCGCTCTT +
Preference number: 4 (lower is better)
Translates to: CLSDVSLQCLEAGFPDDFGDQSL*VEVLAL
Trigger: AAGAGCGAGAACTTCAACCCAGAGGCTCTGGTCACC...AAAGTCATCAGGGAACCCAGCTTCCAGGCATTGTAGGGAGACATCAGACAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp CACTCCTTCACAAGGGACACGCACCCAGACACTCCCTTGCAGGATACTTCCCACCTAATCTCTGCACTCTaGATGAAATCCTCCGTCTTC +
Preference number: 4 (lower is better)
Translates to: HSFTRDTHPDTPLQDTSHLISAL*MKSSVF
Trigger: GAAGACGGAGGATTTCATCCAGAGTGCAGAGATTAG...GTGGGAAGTATCCTGCAAGGGAGTGTCTGGGTGCGTGTCCCTTGTGAAGGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR TCA 90 bp ATGTCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGAATTGGGAGGACCCAATaGACTGGAAGGTATGCGAAA +
Preference number: 4 (lower is better)
Translates to: MSPYNAWKLGSLMTLQVGIGRTQ*TGRYAK
Trigger: TTTCGCATACCTTCCAGTTCATTGGGTCCTCCCAAT...TCCCACCTGCAAAGTCATCAGGGAACCCAGCTTCCAGGCATTGTAGGGAGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR TCA 90 bp CTACAGTACAGTAATCTGGATACAGACAGTAAAAGGAGGCCCCGGGCCTCCGCTATTGGGAGGACCCAATaGACTGGAAGGTATGCGAAA +
Preference number: 4 (lower is better)
Translates to: LQYSNLDTDSKRRPRASAIGRTQ*TGRYAK
Trigger: TTTCGCATACCTTCCAGTTCATTGGGTCCTCCCAAT...AGCGGAGGCCCGGGGCCTCCTTTTACTGTCTGTATCCAGATTACTGTACTGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR TCA 90 bp CAGTCTCCTGCGACACACCTGTTTGACTCTAATGACAAGGTTAGAATACAAACCATGAAGGCCCCAGGGTaGGTGTGTGCGGGATCATCG +
Preference number: 4 (lower is better)
Translates to: QSPATHLFDSNDKVRIQTMKAPG*VCAGSS
Trigger: CGATGATCCCGCACACACTCACCCTGGGGCCTTCAT...GGTTTGTATTCTAACCTTGTCATTAGAGTCAAACAGGTGTGTCGCAGGAGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR TCA 90 bp CAGTCTCCTGCGACACACCTGTTTGACTCTAATGACAAGGTTAGAATACAAACCGGGCGCTTCCCTGGTTaGTTCCGTTTTCCTGCTCCG +
Preference number: 4 (lower is better)
Translates to: QSPATHLFDSNDKVRIQTGRFPG*FRFPAP
Trigger: CGGAGCAGGAAAACGGAATCAACCAGGGAAGCGCCC...GGTTTGTATTCTAACCTTGTCATTAGAGTCAAACAGGTGTGTCGCAGGAGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR GCA 90 bp TCCTCCACCCACCAGCTCCTCAACAGACCCTTGCAGACAATGCAAACGCACCAGGTCATTGCTAATCTCTaGACTCTGGATGAAATCCTC +
Preference number: 4 (lower is better)
Translates to: SSTHQLLNRPLQTMQTHQVIANL*TLDEIL
Trigger: GAGGATTTCATCCAGAGTGCAGAGATTAGCAATGAC...CTGGTGCGTTTGCATTGTCTGCAAGGGTCTGTTGAGGAGCTGGTGGGTGGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR GCA 90 bp CTACAGTACAGTAATCTGGATACAGACAGTAAAAGGAGGCCCCGGGCCTCCGCTTTGATTCCGTTTTCCTaGTCCGCGTATCTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: LQYSNLDTDSKRRPRASALIPFS*SAYLCL
Trigger: CAGACACAGATACGCGGAGCAGGAAAACGGAATCAA...AGCGGAGGCCCGGGGCCTCCTTTTACTGTCTGTATCCAGATTACTGTACTGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR GCA 90 bp TTCCCATCTGCCTGTCTGATGTCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGTTTGCTGAGGAAGGGTaGTGCAGGCAATCCTATTTT +
Preference number: 4 (lower is better)
Translates to: FPSACLMSPYNAWKLGSLFAEEG*CRQSYF
Trigger: AAAATAGGATTGCCTGCAGCACCCTTCCTCAGCAAA...CAGGGAACCCAGCTTCCAGGCATTGTAGGGAGACATCAGACAGGCAGATGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp CAGTCTCCTGCGACACACCTGTTTGACTCTAATGACAAGGTTAGAATACAAACCCGCAGTGGTTGTCGCTaGGCAGAGCAGTGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: QSPATHLFDSNDKVRIQTRSGCR*AEQWPS
Trigger: AGAAGGCCACTGCTCTGCCCAGCGACAACCACTGCG...GGTTTGTATTCTAACCTTGTCATTAGAGTCAAACAGGTGTGTCGCAGGAGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp ACTAGTTTCCCATCTGCCTGTCTGATGTCTCCCTACAATGCCTGGAAGCTGGGTGAGGACCCAATGAACTaGAAGGTATGCGAAAGGTGG +
Preference number: 4 (lower is better)
Translates to: TSFPSACLMSPYNAWKLGEDPMN*KVCERW
Trigger: CCACCTTTCGCATACCTTCCAGTTCATTGGGTCCTC...ACCCAGCTTCCAGGCATTGTAGGGAGACATCAGACAGGCAGATGGGAAACTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp TCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGAAACGGAGAGCTGGAAATATaGATGTACTGGTTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SPYNAWKLGSLMTLQVGNGELEI*MYWFCW
Trigger: CCAGCAGAACCAGTACATCCATATTTCCAGCTCTCC...GTTTCCCACCTGCAAAGTCATCAGGGAACCCAGCTTCCAGGCATTGTAGGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp CTTGCAGGATACTTCCCACTGTGTTTGTTCTTGAAACCAGTGGGAACTGATGCCACCTGGGCGCTTCCCTaGTTGATTCCGTTTTCCTGC +
Preference number: 4 (lower is better)
Translates to: LAGYFPLCLFLKPVGTDATWALP*LIPFSC
Trigger: GCAGGAAAACGGAATCAACCAGGGAAGCGCCCAGGT...GGCATCAGTTCCCACTGGTTTCAAGAACAAACACAGTGGGAAGTATCCTGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp TACTTAGCCTACAGTACAGTAATCTGGATACAGACAGTAAAAGGAGGCCCCGGGGGGAAGAGTCAAAGGTaGCTCGTCCTCCGACTTCTC +
Preference number: 4 (lower is better)
Translates to: YLAYSTVIWIQTVKGGPGGKSQR*LVLRLL
Trigger: GAGAAGTCGGAGGACGAGCCACCTTTGACTCTTCCC...CCCGGGGCCTCCTTTTACTGTCTGTATCCAGATTACTGTACTGTAGGCTAAGTA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR GCA 90 bp GATGTCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGGTCATTGCTAATCTCTaGACTCTGGATGAAATCCTC +
Preference number: 4 (lower is better)
Translates to: DVSLQCLEAGFPDDFAGGVIANL*TLDEIL
Trigger: GAGGATTTCATCCAGAGTGCAGAGATTAGCAATGAC...CCCACCTGCAAAGTCATCAGGGAACCCAGCTTCCAGGCATTGTAGGGAGACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR GCA 90 bp CCTTGCAGACAATGCAAACGCACCAGTCTCCTGCGACACACCTGTTTGACTCTATTGATTCCGTTTTCCTaGTCCGCGTATCTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: PCRQCKRTSLLRHTCLTLLIPFS*SAYLCL
Trigger: CAGACACAGATACGCGGAGCAGGAAAACGGAATCAA...TAGAGTCAAACAGGTGTGTCGCAGGAGACTGGTGCGTTTGCATTGTCTGCAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp ATGTCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGAAGCTCTGTGGAGAGCTaGAAATATGGATGTACTGGT +
Preference number: 4 (lower is better)
Translates to: MSPYNAWKLGSLMTLQVGSSVES*KYGCTG
Trigger: ACCAGTACATCCATATTTCCAGCTCTCCACAGAGCT...TCCCACCTGCAAAGTCATCAGGGAACCCAGCTTCCAGGCATTGTAGGGAGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp TACTTAGCCTACAGTACAGTAATCTGGATACAGACAGTAAAAGGAGGCCCCGGGTTCTCAGAGAGCACCTaGGCGCTTCCCTGGTTGATT +
Preference number: 4 (lower is better)
Translates to: YLAYSTVIWIQTVKGGPGFSEST*ALPWLI
Trigger: AATCAACCAGGGAAGCGCCCAGGTGCTCTCTGAGAA...CCCGGGGCCTCCTTTTACTGTCTGTATCCAGATTACTGTACTGTAGGCTAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
3UTR CAA 72 bp CACTCCTCGGAGTTAGCCAGAGAGCAGAGTGTGTGTTaGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTC +
Preference number: 4 (lower is better)
Translates to: HSSELAREQSVC*CVCVCVCVCVF
Trigger: GAAAACACACACACACACACACACACACACACACAAACACACACTCTGCTCTCTGGCTAACTCCGAGGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR CAA 72 bp CATACAAGGTTGGGGTTCAGAGTTAAGGACGTTCTGTaGCCACCACCACAAACATCAGGCCATCCCAAACTG +
Preference number: 4 (lower is better)
Translates to: HTRLGFRVKDVL*PPPQTSGHPKL
Trigger: CAGTTTGGGATGGCCTGATGTTTGTGGTGGTGGCAACAGAACGTCCTTAACTCTGAACCCCAACCTTGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR CAA 72 bp CCACACTGTGCGGGGAGATCCAAACATTCCTTGAAATaGTACAACCCTACTCCAGAGCAGTCCAAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: PHCAGRSKHSLK*YNPTPEQSKVL
Trigger: CAGCACTTTGGACTGCTCTGGAGTAGGGTTGTACAATTTCAAGGAATGTTTGGATCTCCCCGCACAGTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
CDS-3UTR CCA 90 bp ACTAGTTTCCCATCTGCCTGTCTGATGTCTCCCTACAATGCCTGGAAGCTGGGTCTAATCTCTGCACTCTaGATGAAATCCTCCGTCTTC +
Preference number: 4 (lower is better)
Translates to: TSFPSACLMSPYNAWKLGLISAL*MKSSVF
Trigger: GAAGACGGAGGATTTCATCCAGAGTGCAGAGATTAG...ACCCAGCTTCCAGGCATTGTAGGGAGACATCAGACAGGCAGATGGGAAACTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
3UTR CAA 72 bp ACACTGGACACAACCGAGTGTCTTTTCCTCTGTGTCTaGTCTCGGTTTCTCTGCCAACTCTGCATATGCCTT +
Preference number: 4 (lower is better)
Translates to: TLDTTECLFLCV*SRFLCQLCICL
Trigger: AAGGCATATGCAGAGTTGGCAGAGAAACCGAGACAAGACACAGAGGAAAAGACACTCGGTTGTGTCCAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR CAA 72 bp TTGTACAACCCTACTCCAGAGCAGTCCAAAGTGCTGTaGCTGAACACATCTGTGTTCCACACACACACACCA +
Preference number: 4 (lower is better)
Translates to: LYNPTPEQSKVL*LNTSVFHTHTP
Trigger: TGGTGTGTGTGTGTGGAACACAGATGTGTTCAGCAACAGCACTTTGGACTGCTCTGGAGTAGGGTTGTACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR CAA 72 bp ACCAGTTGGTTGAGGGTCTTGTGGCTCAGGAAACAGTaGCCATGCCAACTCAACTTACAAAGTCTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: TSWLRVLWLRKQ*PCQLNLQSLAF
Trigger: GAAAGCCAGACTTTGTAAGTTGAGTTGGCATGGCAACTGTTTCCTGAGCCACAAGACCCTCAACCAACTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
CDS-3UTR GCA 90 bp CCTTGCAGACAATGCAAACGCACCAGTCTCCTGCGACACACCTGTTTGACTCTAGTCATTGCTAATCTCTaGACTCTGGATGAAATCCTC +
Preference number: 4 (lower is better)
Translates to: PCRQCKRTSLLRHTCLTLVIANL*TLDEIL
Trigger: GAGGATTTCATCCAGAGTGCAGAGATTAGCAATGAC...TAGAGTCAAACAGGTGTGTCGCAGGAGACTGGTGCGTTTGCATTGTCTGCAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp AAACTGAGTTGGATGAATCGAGAAAAGCAAAATGTGACCAACATAGACGATTATCCTGGGGGCACTGGGTaGGGAGTAATCCAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: KLSWMNREKQNVTNIDDYPGGTG*GVIQPC
Trigger: GCAGGGCTGGATTACTCCCCACCCAGTGCCCCCAGG...ATAATCGTCTATGTTGGTCACATTTTGCTTTTCTCGATTCATCCAACTCAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
CDS-3UTR CCA 90 bp AAACTGAGTTGGATGAATCGAGAAAAGCAAAATGTGACCAACATAGACGATTATACTGGTTCTGCTGGGTaGGTGGAGGAGGGGACCCCG +
Preference number: 4 (lower is better)
Translates to: KLSWMNREKQNVTNIDDYTGSAG*VEEGTP
Trigger: CGGGGTCCCCTCCTCCACCCACCCAGCAGAACCAGT...ATAATCGTCTATGTTGGTCACATTTTGCTTTTCTCGATTCATCCAACTCAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
CDS-3UTR CCA 90 bp AGAGTCGAAAGTGAGATACAGTACTTGTTGAATGACAGACCAAGATGCTTGGTTATGTACTGGTTCTGCTaGGTGGGTGGAGGAGGGGAC +
Preference number: 4 (lower is better)
Translates to: RVESEIQYLLNDRPRCLVMYWFC*VGGGGD
Trigger: GTCCCCTCCTCCACCCACCCAGCAGAACCAGTACAT...AACCAAGCATCTTGGTCTGTCATTCAACAAGTACTGTATCTCACTTTCGACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
CDS-3UTR CCA 90 bp TACTTAGCCTACAGTACAGTAATCTGGATACAGACAGTAAAAGGAGGCCCCGGGGAAATATGGATGTACTaGTTCTGCTGGGTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: YLAYSTVIWIQTVKGGPGEIWMY*FCWVGG
Trigger: TCCACCCACCCAGCAGAACCAGTACATCCATATTTC...CCCGGGGCCTCCTTTTACTGTCTGTATCCAGATTACTGTACTGTAGGCTAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp TACTTAGCCTACAGTACAGTAATCTGGATACAGACAGTAAAAGGAGGCCCCGGGGGAGAGCTGGAAATATaGATGTACTGGTTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: YLAYSTVIWIQTVKGGPGGELEI*MYWFCW
Trigger: CCAGCAGAACCAGTACATCCATATTTCCAGCTCTCC...CCCGGGGCCTCCTTTTACTGTCTGTATCCAGATTACTGTACTGTAGGCTAAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR GCA 90 bp CTTGCAGGATACTTCCCACTGTGTTTGTTCTTGAAACCAGTGGGAACTGATGCCTTTGCTGAGGAAGGGTaGTGCAGGCAATCCTATTTT +
Preference number: 4 (lower is better)
Translates to: LAGYFPLCLFLKPVGTDAFAEEG*CRQSYF
Trigger: AAAATAGGATTGCCTGCAGCACCCTTCCTCAGCAAA...GGCATCAGTTCCCACTGGTTTCAAGAACAAACACAGTGGGAAGTATCCTGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp TCCATAGTCATGAACAGTACTAGACCTAAAATACAGAAAAGATGCTGCCGGCACTCAGACTGCCCATGTTaGCCAGCAGGGTGGAATAAG +
Preference number: 4 (lower is better)
Translates to: SIVMNSTRPKIQKRCCRHSDCPC*PAGWNK
Trigger: CTTATTCCACCCTGCTGGCCAACATGGGCAGTCTGA...GTGCCGGCAGCATCTTTTCTGTATTTTAGGTCTAGTACTGTTCATGACTATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
CDS-3UTR CCA 90 bp AAATCGCAAAGTTCTTTAGAAGTTCGTCCTAAAAACACTGGACACAACCGAGTGGGGAAGAGTCAAAGGTaGCTCGTCCTCCGACTTCTC +
Preference number: 4 (lower is better)
Translates to: KSQSSLEVRPKNTGHNRVGKSQR*LVLRLL
Trigger: GAGAAGTCGGAGGACGAGCCACCTTTGACTCTTCCC...CACTCGGTTGTGTCCAGTGTTTTTAGGACGAACTTCTAAAGAACTTTGCGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR CAA 72 bp AGTGCCTGCCGTCAGGTAGTACTCGGTAGTCATATATaGTCACGGGCTAGTTCGTACTTCACATTCATCCTT +
Preference number: 4 (lower is better)
Translates to: SACRQVVLGSHI*SRASSYFTFIL
Trigger: AAGGATGAATGTGAAGTACGAACTAGCCCGTGACAATATATGACTACCGAGTACTACCTGACGGCAGGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR CAA 72 bp GGTGGGCATGCTCAGAACACACACATATGCAATAAGTaGCTTGTGTCAAAGGCAGGGATCAAAGTCTCAAGG +
Preference number: 4 (lower is better)
Translates to: GGHAQNTHICNK*LVSKAGIKVSR
Trigger: CCTTGAGACTTTGATCCCTGCCTTTGACACAAGCAACTTATTGCATATGTGTGTGTTCTGAGCATGCCCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
CDS-3UTR TCA 90 bp CAGTCTCCTGCGACACACCTGTTTGACTCTAATGACAAGGTTAGAATACAAACCATTGGGAGGACCCAATaGACTGGAAGGTATGCGAAA +
Preference number: 4 (lower is better)
Translates to: QSPATHLFDSNDKVRIQTIGRTQ*TGRYAK
Trigger: TTTCGCATACCTTCCAGTTCATTGGGTCCTCCCAAT...GGTTTGTATTCTAACCTTGTCATTAGAGTCAAACAGGTGTGTCGCAGGAGACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp CAGTCTCCTGCGACACACCTGTTTGACTCTAATGACAAGGTTAGAATACAAACCGAAATATGGATGTACTaGTTCTGCTGGGTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: QSPATHLFDSNDKVRIQTEIWMY*FCWVGG
Trigger: TCCACCCACCCAGCAGAACCAGTACATCCATATTTC...GGTTTGTATTCTAACCTTGTCATTAGAGTCAAACAGGTGTGTCGCAGGAGACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CCA 90 bp AAACTGAGTTGGATGAATCGAGAAAAGCAAAATGTGACCAACATAGACGATTATGATCAAAGAGCTGGCTaGTCCGCTCAGGACAGCAGG +
Preference number: 4 (lower is better)
Translates to: KLSWMNREKQNVTNIDDYDQRAG*SAQDSR
Trigger: CCTGCTGTCCTGAGCGGACCAGCCAGCTCTTTGATC...ATAATCGTCTATGTTGGTCACATTTTGCTTTTCTCGATTCATCCAACTCAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
CDS-3UTR CCA 90 bp AAACTGAGTTGGATGAATCGAGAAAAGCAAAATGTGACCAACATAGACGATTATGGCAGATCAAAGAGCTaGCTGGTCCGCTCAGGACAG +
Preference number: 4 (lower is better)
Translates to: KLSWMNREKQNVTNIDDYGRSKS*LVRSGQ
Trigger: CTGTCCTGAGCGGACCAGCCAGCTCTTTGATCTGCC...ATAATCGTCTATGTTGGTCACATTTTGCTTTTCTCGATTCATCCAACTCAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR CAA 72 bp TCTGAGAAACCGTTCTGCATTTCGTCTGGCCTCTACTaGAGAAACATCAAAACAAAAGCCAGGCATTCAAGC +
Preference number: 4 (lower is better)
Translates to: SEKPFCISSGLY*RNIKTKARHSS
Trigger: GCTTGAATGCCTGGCTTTTGTTTTGATGTTTCTCAAGTAGAGGCCAGACGAAATGCAGAACGGTTTCTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
CDS-3UTR CCA 90 bp AAATCGCAAAGTTCTTTAGAAGTTCGTCCTAAAAACACTGGACACAACCGAGTGGAAATATGGATGTACTaGTTCTGCTGGGTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: KSQSSLEVRPKNTGHNRVEIWMY*FCWVGG
Trigger: TCCACCCACCCAGCAGAACCAGTACATCCATATTTC...CACTCGGTTGTGTCCAGTGTTTTTAGGACGAACTTCTAAAGAACTTTGCGATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
CDS-3UTR CCA 90 bp AAATCGCAAAGTTCTTTAGAAGTTCGTCCTAAAAACACTGGACACAACCGAGTGCTAATCTCTGCACTCTaGATGAAATCCTCCGTCTTC +
Preference number: 4 (lower is better)
Translates to: KSQSSLEVRPKNTGHNRVLISAL*MKSSVF
Trigger: GAAGACGGAGGATTTCATCCAGAGTGCAGAGATTAG...CACTCGGTTGTGTCCAGTGTTTTTAGGACGAACTTCTAAAGAACTTTGCGATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR CAA 72 bp TTCCCAAAAAGAGTCGAAAGTGAGATACAGTACTTGTaGAATGACAGACCAAGATGCTTGGTTAAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: FPKRVESEIQYL*NDRPRCLVKKP
Trigger: AGGCTTCTTAACCAAGCATCTTGGTCTGTCATTCAACAAGTACTGTATCTCACTTTCGACTCTTTTTGGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
CDS-3UTR CCA 90 bp AAACTGAGTTGGATGAATCGAGAAAAGCAAAATGTGACCAACATAGACGATTATAGCTCTGTGGAGAGCTaGAAATATGGATGTACTGGT +
Preference number: 4 (lower is better)
Translates to: KLSWMNREKQNVTNIDDYSSVES*KYGCTG
Trigger: ACCAGTACATCCATATTTCCAGCTCTCCACAGAGCT...ATAATCGTCTATGTTGGTCACATTTTGCTTTTCTCGATTCATCCAACTCAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
3UTR CAA 72 bp CTTTTCCCAAAAAGAGTCGAAAGTGAGATACAGTACTaGTTGAATGACAGACCAAGATGCTTGGTTAAGAAG +
Preference number: 4 (lower is better)
Translates to: LFPKRVESEIQY*LNDRPRCLVKK
Trigger: CTTCTTAACCAAGCATCTTGGTCTGTCATTCAACAAGTACTGTATCTCACTTTCGACTCTTTTTGGGAAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
CDS CCA 90 bp CGGATGCCAGGGGTGCTGGGGAGCCAGGCCACACCCTCCACGCAGTaGTTGTCGCTGGGCAGAGCAGTGGCCTTCTCCTCCGAGGGCCGG +
Preference number: 5 (lower is better)
Translates to: RMPGVLGSQATPSTQ*LSLGRAVAFSSEGR
Trigger: CCGGCCCTCGGAGGAGAAGGCCACTGCTCTGCCCAGCGACAACCACTGCGTGGAGGGTGTGGCCTGGCTCCCCAGCACCCCTGGCATCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS TCA 90 bp CCGAGGCTGCCCCAGGCGTGTCCATGTCAGGGCTGCCCACCGGGATaGGCAGGGGCTGGTTACCTGGGATCACCAGGTGCTGCGGCAGAC +
Preference number: 5 (lower is better)
Translates to: PRLPQACPCQGCPPG*AGAGYLGSPGAAAD
Trigger: GTCTGCCGCAGCACCTGGTGATCCCAGGTAACCAGCCCCTGCTCATCCCGGTGGGCAGCCCTGACATGGACACGCCTGGGGCAGCCTCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CCA 90 bp GCCAGGCCACACCCTCCACGCAGTGGTTGTCGCTGGGCAGAGCAGTaGCCTTCTCCTCCGAGGGCCGGCTGGTGGCGGGGATCTCACGTT +
Preference number: 5 (lower is better)
Translates to: ARPHPPRSGCRWAEQ*PSPPRAGWWRGSHV
Trigger: AACGTGAGATCCCCGCCACCAGCCGGCCCTCGGAGGAGAAGGCCACTGCTCTGCCCAGCGACAACCACTGCGTGGAGGGTGTGGCCTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CCA 90 bp TGTCGCTGGGCAGAGCAGTGGCCTTCTCCTCCGAGGGCCGGCTGGTaGCGGGGATCTCACGTTTCTTGGGAGGCAGGCATTCGTTGCTCC +
Preference number: 5 (lower is better)
Translates to: CRWAEQWPSPPRAGW*RGSHVSWEAGIRCS
Trigger: GGAGCAACGAATGCCTGCCTCCCAAGAAACGTGAGATCCCCGCCACCAGCCGGCCCTCGGAGGAGAAGGCCACTGCTCTGCCCAGCGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CCA 90 bp GGTTGTCGCTGGGCAGAGCAGTGGCCTTCTCCTCCGAGGGCCGGCTaGTGGCGGGGATCTCACGTTTCTTGGGAGGCAGGCATTCGTTGC +
Preference number: 5 (lower is better)
Translates to: GCRWAEQWPSPPRAG*WRGSHVSWEAGIRC
Trigger: GCAACGAATGCCTGCCTCCCAAGAAACGTGAGATCCCCGCCACCAGCCGGCCCTCGGAGGAGAAGGCCACTGCTCTGCCCAGCGACAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS TCA 90 bp TGCGAAAGGTGGGCGTACTGCACAGGAGACACCGGGGTCCCTGACTaGGGAGGAGGGTACACGGTGGGCAGCGTGTTGGCTGTGGGGACT +
Preference number: 5 (lower is better)
Translates to: CERWAYCTGDTGVPD*GGGYTVGSVLAVGT
Trigger: AGTCCCCACAGCCAACACGCTGCCCACCGTGTACCCTCCTCCTCAGTCAGGGACCCCGGTGTCTCCTGTGCAGTACGCCCACCTTTCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS TCA 90 bp GGTATGCGAAAGGTGGGCGTACTGCACAGGAGACACCGGGGTCCCTaGCTGAGGAGGAGGGTACACGGTGGGCAGCGTGTTGGCTGTGGG +
Preference number: 5 (lower is better)
Translates to: GMRKVGVLHRRHRGP*LRRRVHGGQRVGCG
Trigger: CCCACAGCCAACACGCTGCCCACCGTGTACCCTCCTCCTCAGTCAGGGACCCCGGTGTCTCCTGTGCAGTACGCCCACCTTTCGCATACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS GCA 90 bp TGCAGGCCGCTCTTGTCATTGAGGGTGGATGGGGAGGCCTCTCGATaGGTGGTCTGCTGGGCCTCCAGGTCGGCTGAGGGTGTGCTGCTA +
Preference number: 5 (lower is better)
Translates to: CRPLLSLRVDGEASR*VVCWASRSAEGVLL
Trigger: TAGCAGCACACCCTCAGCCGACCTGGAGGCCCAGCAGACCACGCATCGAGAGGCCTCCCCATCCACCCTCAATGACAAGAGCGGCCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CCA 90 bp GTGCGGGATCATCGTCTGATGGGGATGGAGGTGGACCGGGATGGGTaGGGGAGATGTCGCCCGCCCGGAGCTCTGTGGAGAGCTGGAAAT +
Preference number: 5 (lower is better)
Translates to: VRDHRLMGMEVDRDG*GRCRPPGALWRAGN
Trigger: ATTTCCAGCTCTCCACAGAGCTCCGGGCGGGCGACATCTCCCCCACCCATCCCGGTCCACCTCCATCCCCATCAGACGATGATCCCGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CCA 90 bp CACGGACTGCACCACCGGCAGGTGGATCTGGGCCTGCACCATGGCTaGGTAGGCAGCCTGGGTGACCAGAGCCTCTGGGTTGAAGTTCTC +
Preference number: 5 (lower is better)
Translates to: HGLHHRQVDLGLHHG*VGSLGDQSLWVEVL
Trigger: GAGAACTTCAACCCAGAGGCTCTGGTCACCCAGGCTGCCTACCCAGCCATGGTGCAGGCCCAGATCCACCTGCCGGTGGTGCAGTCCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CCA 90 bp GGATGGGTGGGGGAGATGTCGCCCGCCCGGAGCTCTGTGGAGAGCTaGAAATATGGATGTACTGGTTCTGCTGGGTGGGTGGAGGAGGGG +
Preference number: 5 (lower is better)
Translates to: GWVGEMSPARSSVES*KYGCTGSAGWVEEG
Trigger: CCCCTCCTCCACCCACCCAGCAGAACCAGTACATCCATATTTCCAGCTCTCCACAGAGCTCCGGGCGGGCGACATCTCCCCCACCCATCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CCA 90 bp GTGGACCGGGATGGGTGGGGGAGATGTCGCCCGCCCGGAGCTCTGTaGAGAGCTGGAAATATGGATGTACTGGTTCTGCTGGGTGGGTGG +
Preference number: 5 (lower is better)
Translates to: VDRDGWGRCRPPGAL*RAGNMDVLVLLGGW
Trigger: CCACCCACCCAGCAGAACCAGTACATCCATATTTCCAGCTCTCCACAGAGCTCCGGGCGGGCGACATCTCCCCCACCCATCCCGGTCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CCA 90 bp GTCCATGTCAGGGCTGCCCACCGGGATGAGCAGGGGCTGGTTACCTaGGATCACCAGGTGCTGCGGCAGACCACCAGCATAGGTGATTGC +
Preference number: 5 (lower is better)
Translates to: VHVRAAHRDEQGLVT*DHQVLRQTTSIGDC
Trigger: GCAATCACCTATGCTGGTGGTCTGCCGCAGCACCTGGTGATCCCAGGTAACCAGCCCCTGCTCATCCCGGTGGGCAGCCCTGACATGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CCA 90 bp GGCCTGCACCATGGCTGGGTAGGCAGCCTGGGTGACCAGAGCCTCTaGGTTGAAGTTCTCGCTCTTGGGCAGGGCGGTGGTGACAAACGT +
Preference number: 5 (lower is better)
Translates to: GLHHGWVGSLGDQSL*VEVLALGQGGGDKR
Trigger: ACGTTTGTCACCACCGCCCTGCCCAAGAGCGAGAACTTCAACCCAGAGGCTCTGGTCACCCAGGCTGCCTACCCAGCCATGGTGCAGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CAA 90 bp GATGCCCGGGAGCTCCATGGACATGGTTCTGACCATCCTCCACCCACCAGCTCCGCACTGGTGACCGGGTaGCCTGATGGGGAGATCAGC +
Preference number: 5 (lower is better)
Translates to: DARELHGHGSDHPPPTSSALVTG*PDGEIS
Trigger: GCTGATCTCCCCATCAGGCAACCCGGTCACCAGTGC...GGAGCTGGTGGGTGGAGGATGGTCAGAACCATGTCCATGGAGCTCCCGGGCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CAA 90 bp CACTGCCGGAGAAGGCAGGGGCTGATGAAGCCACATTCAGGGCCACTAAGGATGCCCTCCACGCAGTGGTaGTCGCTGGGCAGAGCAGTG +
Preference number: 5 (lower is better)
Translates to: HCRRRQGLMKPHSGPLRMPSTQW*SLGRAV
Trigger: CACTGCTCTGCCCAGCGACAACCACTGCGTGGAGGG...CATCCTTAGTGGCCCTGAATGTGGCTTCATCAGCCCCTGCCTTCTCCGGCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CCA 90 bp GGGGCTCAACCTTATGTCCTGGTGCCTGGCTCAGACTGCCCATGTTaGCCAGCAGGGTGGAATAAGCCTCCAGCTGGGAGCGCTGTGATG +
Preference number: 5 (lower is better)
Translates to: GAQPYVLVPGSDCPC*PAGWNKPPAGSAVM
Trigger: CATCACAGCGCTCCCAGCTGGAGGCTTATTCCACCCTGCTGGCCAACATGGGCAGTCTGAGCCAGGCACCAGGACATAAGGTTGAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CCA 90 bp GTCGCCCGCCCGGAGCTCTGTGGAGAGCTGGAAATATGGATGTACTaGTTCTGCTGGGTGGGTGGAGGAGGGGACCCCGGGTTGACTAAT +
Preference number: 5 (lower is better)
Translates to: VARPELCGELEIWMY*FCWVGGGGDPGLTN
Trigger: ATTAGTCAACCCGGGGTCCCCTCCTCCACCCACCCAGCAGAACCAGTACATCCATATTTCCAGCTCTCCACAGAGCTCCGGGCGGGCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CAA 90 bp GACCATCCTCCACCCACCAGCTCCTCAACAGACCCTTGCAGACAATGCAAACGCCCCTCCACGCAGTGGTaGTCGCTGGGCAGAGCAGTG +
Preference number: 5 (lower is better)
Translates to: DHPPPTSSSTDPCRQCKRPSTQW*SLGRAV
Trigger: CACTGCTCTGCCCAGCGACAACCACTGCGTGGAGGG...GCGTTTGCATTGTCTGCAAGGGTCTGTTGAGGAGCTGGTGGGTGGAGGATGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CAA 90 bp CACTGCCGGAGAAGGCAGGGGCTGATGAAGCCACATTCAGGGCCACTAAGGATGGCACTGGTGACCGGGTaGCCTGATGGGGAGATCAGC +
Preference number: 5 (lower is better)
Translates to: HCRRRQGLMKPHSGPLRMALVTG*PDGEIS
Trigger: GCTGATCTCCCCATCAGGCAACCCGGTCACCAGTGC...CATCCTTAGTGGCCCTGAATGTGGCTTCATCAGCCCCTGCCTTCTCCGGCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CAA 90 bp CGACTCTGCACACTGCCGGAGAAGGCAGGGGCTGATGAAGCCACATTCAGGGCCTTGAAGTTCTCGCTCTaGGGCAGGGCGGTGGTGACA +
Preference number: 5 (lower is better)
Translates to: RLCTLPEKAGADEATFRALKFSL*GRAVVT
Trigger: TGTCACCACCGCCCTGCCCAAGAGCGAGAACTTCAA...GGCCCTGAATGTGGCTTCATCAGCCCCTGCCTTCTCCGGCAGTGTGCAGAGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS GCA 90 bp CGCCCGGAGCTCTGTGGAGAGCTGGAAATATGGATGTACTGGTTCTaGTGGGTGGGTGGAGGAGGGGACCCCGGGTTGACTAATCCTGCA +
Preference number: 5 (lower is better)
Translates to: RPELCGELEIWMYWF*WVGGGGDPGLTNPA
Trigger: TGCAGGATTAGTCAACCCGGGGTCCCCTCCTCCACCCACCCAGCAGAACCAGTACATCCATATTTCCAGCTCTCCACAGAGCTCCGGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS GCA 90 bp ACCTGGGATCACCAGGTGCTGCGGCAGACCACCAGCATAGGTGATTaGTTGCTGCTGGCCGCTCAGGTAGCCGATGACAGGAGGTTGAGT +
Preference number: 5 (lower is better)
Translates to: TWDHQVLRQTTSIGD*LLLAAQVADDRRLS
Trigger: ACTCAACCTCCTGTCATCGGCTACCTGAGCGGCCAGCAGCAAGCAATCACCTATGCTGGTGGTCTGCCGCAGCACCTGGTGATCCCAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CCA 90 bp CCGGAGCTCTGTGGAGAGCTGGAAATATGGATGTACTGGTTCTGCTaGGTGGGTGGAGGAGGGGACCCCGGGTTGACTAATCCTGCAGCC +
Preference number: 5 (lower is better)
Translates to: PELCGELEIWMYWFC*VGGGGDPGLTNPAA
Trigger: GGCTGCAGGATTAGTCAACCCGGGGTCCCCTCCTCCACCCACCCAGCAGAACCAGTACATCCATATTTCCAGCTCTCCACAGAGCTCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CCA 90 bp CACAGATCCACGGACCCCGGAGGTATCACGACTGCTGTAGTCTGCTaGGCTTGGGTGGACCACCACATGCCTGGACTCATAGGGATGAGG +
Preference number: 5 (lower is better)
Translates to: HRSTDPGGITTAVVC*AWVDHHMPGLIGMR
Trigger: CCTCATCCCTATGAGTCCAGGCATGTGGTGGTCCACCCAAGCCCAGCAGACTACAGCAGTCGTGATACCTCCGGGGTCCGTGGATCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CAA 90 bp GATGTCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGACGGTGGGCAGCGTGTaGGCTGTGGGGACTGACCTG +
Preference number: 5 (lower is better)
Translates to: DVSLQCLEAGFPDDFAGGTVGSV*AVGTDL
Trigger: CAGGTCAGTCCCCACAGCCAACACGCTGCCCACCGT...CCCACCTGCAAAGTCATCAGGGAACCCAGCTTCCAGGCATTGTAGGGAGACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CAA 90 bp CGCACTCCTTCACAAGGGACACGCACCCAGACACTCCCTTGCAGGATACTTCCCTGTAGTCTGCTGGGCTaGGGTGGACCACCACATGCC +
Preference number: 5 (lower is better)
Translates to: RTPSQGTRTQTLPCRILPCSLLG*GGPPHA
Trigger: GGCATGTGGTGGTCCACCCAAGCCCAGCAGACTACA...GGGAAGTATCCTGCAAGGGAGTGTCTGGGTGCGTGTCCCTTGTGAAGGAGTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CAA 90 bp GAGGTGTGGAAGGTTCTGCAGGGTTCCTTGCAAGGGAGAAAGGACGCTGCCACTCCAGGCTGTCGGTCTTaGCCTGCTTCAGCAGGACGC +
Preference number: 5 (lower is better)
Translates to: EVWKVLQGSLQGRKDAATPGCRS*PASAGR
Trigger: GCGTCCTGCTGAAGCAGGCAAAGACCGACAGCCTGG...AGTGGCAGCGTCCTTTCTCCCTTGCAAGGAACCCTGCAGAACCTTCCACACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
CDS-3UTR CAA 90 bp TACCGTGCTCCCTACACAGTTGACCAAAGGTGCTCCGGGAGCCTGGAGGACCCCGGAATGAGCGAAGGCTaGGGAAGAGTCAAAGGTGGC +
Preference number: 5 (lower is better)
Translates to: YRAPYTVDQRCSGSLEDPGMSEG*GRVKGG
Trigger: GCCACCTTTGACTCTTCCCAAGCCTTCGCTCATTCC...GGGGTCCTCCAGGCTCCCGGAGCACCTTTGGTCAACTGTGTAGGGAGCACGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
CDS TCA 90 bp CGGCATCACTATATTGCACAACCACCTGGGATGAAGGCCCCAGGGTaGGTGTGTGCGGGATCATCGTCTGATGGGGATGGAGGTGGACCG +
Preference number: 5 (lower is better)
Translates to: RHHYIAQPPGMKAPG*VCAGSSSDGDGGGP
Trigger: CGGTCCACCTCCATCCCCATCAGACGATGATCCCGCACACACTCACCCTGGGGCCTTCATCCCAGGTGGTTGTGCAATATAGTGATGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS TCA 90 bp GGGTTGAAGTTCTCGCTCTTGGGCAGGGCGGTGGTGACAAACGTGTaGGGTACTGCAGCAAACTGGGGTGATGACGTCACGATGGCCGAG +
Preference number: 5 (lower is better)
Translates to: GLKFSLLGRAVVTNV*GTAANWGDDVTMAE
Trigger: CTCGGCCATCGTGACGTCATCACCCCAGTTTGCTGCAGTACCTCACACGTTTGTCACCACCGCCCTGCCCAAGAGCGAGAACTTCAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS GCA 90 bp CATCACAGATCCACGGACCCCGGAGGTATCACGACTGCTGTAGTCTaGTGGGCTTGGGTGGACCACCACATGCCTGGACTCATAGGGATG +
Preference number: 5 (lower is better)
Translates to: HHRSTDPGGITTAVV*WAWVDHHMPGLIGM
Trigger: CATCCCTATGAGTCCAGGCATGTGGTGGTCCACCCAAGCCCAGCAGACTACAGCAGTCGTGATACCTCCGGGGTCCGTGGATCTGTGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CAA 90 bp AAGGCAGGGGCTGATGAAGCCACATTCAGGGCCACTAAGGATGCCCGGGAGCTCGGGATCTCACGTTTCTaGGGAGGCAGGCATTCGTTG +
Preference number: 5 (lower is better)
Translates to: KAGADEATFRATKDARELGISRF*GGRHSL
Trigger: CAACGAATGCCTGCCTCCCAAGAAACGTGAGATCCC...GAGCTCCCGGGCATCCTTAGTGGCCCTGAATGTGGCTTCATCAGCCCCTGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CAA 90 bp CCATCTGCCTGTCTGATGTCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGATGGCACTGGTGACCGGGTaGCCTGATGGGGAGATCAGC +
Preference number: 5 (lower is better)
Translates to: PSACLMSPYNAWKLGSLMALVTG*PDGEIS
Trigger: GCTGATCTCCCCATCAGGCAACCCGGTCACCAGTGC...CATCAGGGAACCCAGCTTCCAGGCATTGTAGGGAGACATCAGACAGGCAGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CAA 90 bp GACCATTCCGCTCCAGAGTTCGTCCTAGGAGCCACTCCGCCTCCTGGCTCCATTGCACTGACTTACTGCTaGCCTTGCCTAGGCTCAGCT +
Preference number: 5 (lower is better)
Translates to: DHSAPEFVLGATPPPGSIALTYC*PCLGSA
Trigger: AGCTGAGCCTAGGCAAGGCAAGCAGTAAGTCAGTGC...AATGGAGCCAGGAGGCGGAGTGGCTCCTAGGACGAACTCTGGAGCGGAATGGTC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
CDS-3UTR CAA 90 bp CCTCCAGCCTTTCTCTGGCCAGCGAGGGGAAGAAAGGTCAGCCCACCGAACAAGAGCATAGGTGATTGCTaGCTGCTGGCCGCTCAGGTA +
Preference number: 5 (lower is better)
Translates to: PPAFLWPARGRKVSPPNKSIGDC*LLAAQV
Trigger: TACCTGAGCGGCCAGCAGCAAGCAATCACCTATGCT...CTTGTTCGGTGGGCTGACCTTTCTTCCCCTCGCTGGCCAGAGAAAGGCTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
CDS-3UTR CAA 90 bp CGCACTCCTTCACAAGGGACACGCACCCAGACACTCCCTTGCAGGATACTTCCCTTGAAGTTCTCGCTCTaGGGCAGGGCGGTGGTGACA +
Preference number: 5 (lower is better)
Translates to: RTPSQGTRTQTLPCRILPLKFSL*GRAVVT
Trigger: TGTCACCACCGCCCTGCCCAAGAGCGAGAACTTCAA...GGGAAGTATCCTGCAAGGGAGTGTCTGGGTGCGTGTCCCTTGTGAAGGAGTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CAA 90 bp CACTGCCGGAGAAGGCAGGGGCTGATGAAGCCACATTCAGGGCCACTAAGGATGTTGAAGTTCTCGCTCTaGGGCAGGGCGGTGGTGACA +
Preference number: 5 (lower is better)
Translates to: HCRRRQGLMKPHSGPLRMLKFSL*GRAVVT
Trigger: TGTCACCACCGCCCTGCCCAAGAGCGAGAACTTCAA...CATCCTTAGTGGCCCTGAATGTGGCTTCATCAGCCCCTGCCTTCTCCGGCAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CAA 90 bp CCATCTGCCTGTCTGATGTCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGATGCCAGGCTGTCGGTCTTaGCCTGCTTCAGCAGGACGC +
Preference number: 5 (lower is better)
Translates to: PSACLMSPYNAWKLGSLMPGCRS*PASAGR
Trigger: GCGTCCTGCTGAAGCAGGCAAAGACCGACAGCCTGG...CATCAGGGAACCCAGCTTCCAGGCATTGTAGGGAGACATCAGACAGGCAGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CAA 90 bp GAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGAAACCCAGGTCCCCCAACCCCGGAATGAGCGAAGGCTaGGGAAGAGTCAAAGGTGGC +
Preference number: 5 (lower is better)
Translates to: EAGFPDDFAGGKPRSPNPGMSEG*GRVKGG
Trigger: GCCACCTTTGACTCTTCCCAAGCCTTCGCTCATTCC...GGGGTTGGGGGACCTGGGTTTCCCACCTGCAAAGTCATCAGGGAACCCAGCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS GCA 90 bp TTGGTGGACTCTCGAGGAACAAAGTGGCCTCCGGCATCACTATATTaGACAACCACCTGGGATGAAGGCCCCAGGGTGAGTGTGTGCGGG +
Preference number: 5 (lower is better)
Translates to: LVDSRGTKWPPASLY*TTTWDEGPRVSVCG
Trigger: CCCGCACACACTCACCCTGGGGCCTTCATCCCAGGTGGTTGTGCAATATAGTGATGCCGGAGGCCACTTTGTTCCTCGAGAGTCCACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS GCA 90 bp TTCTCAGAGAGCACCTGGGCGCTTCCCTGGTTGATTCCGTTTTCCTaGTCCGCGTATCTGTGTCTGCTGCCAGCCAGGCTGTCGGTCTTT +
Preference number: 5 (lower is better)
Translates to: FSESTWALPWLIPFS*SAYLCLLPARLSVF
Trigger: AAAGACCGACAGCCTGGCTGGCAGCAGACACAGATACGCGGAGCAGGAAAACGGAATCAACCAGGGAAGCGCCCAGGTGCTCTCTGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CCA 90 bp CGGTGTTCACCAACAGCAAACTGTATCACGGCCACCCCGGGGCTGTaGCTCTCCTCGATTCTCTCCACAGTACTGGAGTCGATCTTGAGG +
Preference number: 5 (lower is better)
Translates to: RCSPTANCITATPGL*LSSILSTVLESILR
Trigger: CCTCAAGATCGACTCCAGTACTGTGGAGAGAATCGAGGAGAGCCACAGCCCCGGGGTGGCCGTGATACAGTTTGCTGTTGGTGAACACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CCA 90 bp CTTAACCTCCTGAGGAATGAGCGAAGGCTTGGGAAGAGTCAAAGGTaGCTCGTCCTCCGACTTCTCCAGTTTACGGGTCTCCGGCGCCGA +
Preference number: 5 (lower is better)
Translates to: LNLLRNERRLGKSQR*LVLRLLQFTGLRRR
Trigger: TCGGCGCCGGAGACCCGTAAACTGGAGAAGTCGGAGGACGAGCCACCTTTGACTCTTCCCAAGCCTTCGCTCATTCCTCAGGAGGTTAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CAA 90 bp ACTAGTTTCCCATCTGCCTGTCTGATGTCTCCCTACAATGCCTGGAAGCTGGGTCCCTCCACGCAGTGGTaGTCGCTGGGCAGAGCAGTG +
Preference number: 5 (lower is better)
Translates to: TSFPSACLMSPYNAWKLGPSTQW*SLGRAV
Trigger: CACTGCTCTGCCCAGCGACAACCACTGCGTGGAGGG...ACCCAGCTTCCAGGCATTGTAGGGAGACATCAGACAGGCAGATGGGAAACTAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CAA 90 bp ACCATCCTCCACCCACCAGCTCCTCAACAGACCCTTGCAGACAATGCAAACGCATGTAGTCTGCTGGGCTaGGGTGGACCACCACATGCC +
Preference number: 5 (lower is better)
Translates to: TILHPPAPQQTLADNANACSLLG*GGPPHA
Trigger: GGCATGTGGTGGTCCACCCAAGCCCAGCAGACTACA...TGCGTTTGCATTGTCTGCAAGGGTCTGTTGAGGAGCTGGTGGGTGGAGGATGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CAA 90 bp CCATCTGCCTGTCTGATGTCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGATGTGTAGTCTGCTGGGCTaGGGTGGACCACCACATGCC +
Preference number: 5 (lower is better)
Translates to: PSACLMSPYNAWKLGSLMCSLLG*GGPPHA
Trigger: GGCATGTGGTGGTCCACCCAAGCCCAGCAGACTACA...CATCAGGGAACCCAGCTTCCAGGCATTGTAGGGAGACATCAGACAGGCAGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CAA 90 bp CTACAATGCCTGGAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGAAACCCAGGGCCGATGACAGGAGGTaGAGTGCCAGCGTAGAAGGC +
Preference number: 5 (lower is better)
Translates to: LQCLEAGFPDDFAGGKPRADDRR*SASVEG
Trigger: GCCTTCTACGCTGGCACTCAACCTCCTGTCATCGGC...CCTGGGTTTCCCACCTGCAAAGTCATCAGGGAACCCAGCTTCCAGGCATTGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CAA 90 bp TTCCCATCTGCCTGTCTGATGTCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGGCCGATGACAGGAGGTaGAGTGCCAGCGTAGAAGGC +
Preference number: 5 (lower is better)
Translates to: FPSACLMSPYNAWKLGSLADDRR*SASVEG
Trigger: GCCTTCTACGCTGGCACTCAACCTCCTGTCATCGGC...CAGGGAACCCAGCTTCCAGGCATTGTAGGGAGACATCAGACAGGCAGATGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CAA 90 bp TCCTCCACCCACCAGCTCCTCAACAGACCCTTGCAGACAATGCAAACGCACCAGACCAGAGCCTCTGGGTaGAAGTTCTCGCTCTTGGGC +
Preference number: 5 (lower is better)
Translates to: SSTHQLLNRPLQTMQTHQTRASG*KFSLLG
Trigger: GCCCAAGAGCGAGAACTTCAACCCAGAGGCTCTGGT...CTGGTGCGTTTGCATTGTCTGCAAGGGTCTGTTGAGGAGCTGGTGGGTGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CAA 90 bp CACTCCTTCACAAGGGACACGCACCCAGACACTCCCTTGCAGGATACTTCCCACACCAGAGCCTCTGGGTaGAAGTTCTCGCTCTTGGGC +
Preference number: 5 (lower is better)
Translates to: HSFTRDTHPDTPLQDTSHTRASG*KFSLLG
Trigger: GCCCAAGAGCGAGAACTTCAACCCAGAGGCTCTGGT...GTGGGAAGTATCCTGCAAGGGAGTGTCTGGGTGCGTGTCCCTTGTGAAGGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CAA 90 bp CGACTCTGCACACTGCCGGAGAAGGCAGGGGCTGATGAAGCCACATTCAGGGCCTCCCCAACAGAGAGTTaGGAACACGGCAGATCAAAG +
Preference number: 5 (lower is better)
Translates to: RLCTLPEKAGADEATFRASPTES*EHGRSK
Trigger: CTTTGATCTGCCGTGTTCCAAACTCTCTGTTGGGGA...GGCCCTGAATGTGGCTTCATCAGCCCCTGCCTTCTCCGGCAGTGTGCAGAGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CAA 90 bp CCTCCAGCCTTTCTCTGGCCAGCGAGGGGAAGAAAGGTCAGCCCACCGAACAAGCCATTCTTCAGGTTCTaGAGGGTGAGCGAGATGCAG +
Preference number: 5 (lower is better)
Translates to: PPAFLWPARGRKVSPPNKPFFRF*RVSEMQ
Trigger: CTGCATCTCGCTCACCCTCAAGAACCTGAAGAATGG...CTTGTTCGGTGGGCTGACCTTTCTTCCCCTCGCTGGCCAGAGAAAGGCTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
CDS-3UTR CAA 90 bp CTACAGTACAGTAATCTGGATACAGACAGTAAAAGGAGGCCCCGGGCCTCCGCTCCAGGCTGTCGGTCTTaGCCTGCTTCAGCAGGACGC +
Preference number: 5 (lower is better)
Translates to: LQYSNLDTDSKRRPRASAPGCRS*PASAGR
Trigger: GCGTCCTGCTGAAGCAGGCAAAGACCGACAGCCTGG...AGCGGAGGCCCGGGGCCTCCTTTTACTGTCTGTATCCAGATTACTGTACTGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CAA 90 bp AATCTGGATACAGACAGTAAAAGGAGGCCCCGGGCCTCCGCTGCCCGCAAGGTCCTCGTGGCTGTGGGTTaGCTCGGTTCTATTTTGCTG +
Preference number: 5 (lower is better)
Translates to: NLDTDSKRRPRASAARKVLVAVG*LGSILL
Trigger: CAGCAAAATAGAACCGAGCAAACCCACAGCCACGAG...GACCTTGCGGGCAGCGGAGGCCCGGGGCCTCCTTTTACTGTCTGTATCCAGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CAA 90 bp GAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGAAACCCAGGTCCCCCAACCCCCTCGTGGCTGTGGGTTaGCTCGGTTCTATTTTGCTG +
Preference number: 5 (lower is better)
Translates to: EAGFPDDFAGGKPRSPNPLVAVG*LGSILL
Trigger: CAGCAAAATAGAACCGAGCAAACCCACAGCCACGAG...GGGGTTGGGGGACCTGGGTTTCCCACCTGCAAAGTCATCAGGGAACCCAGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS TCA 90 bp ACTTCAGTTCGCCATTCTCAGAGAGCACCTGGGCGCTTCCCTGGTTaGTTCCGTTTTCCTGCTCCGCGTATCTGTGTCTGCTGCCAGCCA +
Preference number: 5 (lower is better)
Translates to: TSVRHSQRAPGRFPG*FRFPAPRICVCCQP
Trigger: TGGCTGGCAGCAGACACAGATACGCGGAGCAGGAAAACGGAATCAACCAGGGAAGCGCCCAGGTGCTCTCTGAGAATGGCGAACTGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS GCA 90 bp CATGCCTGGACTCATAGGGATGAGGCACTGACTTACTGCTTGCCTTaGCTAGGCTCAGCTCCACAGAAGATGATGCCCCATACCTCCGGC +
Preference number: 5 (lower is better)
Translates to: HAWTHRDEALTYCLP*LGSAPQKMMPHTSG
Trigger: GCCGGAGGTATGGGGCATCATCTTCTGTGGAGCTGAGCCTAGGCAAGGCAAGCAGTAAGTCAGTGCCTCATCCCTATGAGTCCAGGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CCA 90 bp CACGACTGCTGTAGTCTGCTGGGCTTGGGTGGACCACCACATGCCTaGACTCATAGGGATGAGGCACTGACTTACTGCTTGCCTTGCCTA +
Preference number: 5 (lower is better)
Translates to: HDCCSLLGLGGPPHA*THRDEALTYCLPCL
Trigger: TAGGCAAGGCAAGCAGTAAGTCAGTGCCTCATCCCTATGAGTCCAGGCATGTGGTGGTCCACCCAAGCCCAGCAGACTACAGCAGTCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CCA 90 bp CAGACGTCCCCAACAGAGAGTTTGGAACACGGCAGATCAAAGAGCTaGCTGGTCCGCTCAGGACAGCAGGATGACCAGCCCTGTCCAAAT +
Preference number: 5 (lower is better)
Translates to: QTSPTESLEHGRSKS*LVRSGQQDDQPCPN
Trigger: ATTTGGACAGGGCTGGTCATCCTGCTGTCCTGAGCGGACCAGCCAGCTCTTTGATCTGCCGTGTTCCAAACTCTCTGTTGGGGACGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CCA 90 bp TCGGTCTTTGCCTGCTTCAGCAGGACGCTGGCAGGGTCCACAGGCTaGCCCTTTTTAACAGAGCCATTCTTCAGGTTCTTGAGGGTGAGC +
Preference number: 5 (lower is better)
Translates to: SVFACFSRTLAGSTG*PFLTEPFFRFLRVS
Trigger: GCTCACCCTCAAGAACCTGAAGAATGGCTCTGTTAAAAAGGGCCAGCCTGTGGACCCTGCCAGCGTCCTGCTGAAGCAGGCAAAGACCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CCA 90 bp ACCAAGACTTCGACACTGACCTGTATGACCCTGGTGAGGGTTACCTaGGCTCGGTGTTCACCAACAGCAAACTGTATCACGGCCACCCCG +
Preference number: 5 (lower is better)
Translates to: TKTSTLTCMTLVRVT*ARCSPTANCITATP
Trigger: CGGGGTGGCCGTGATACAGTTTGCTGTTGGTGAACACCGAGCCCAGGTAACCCTCACCAGGGTCATACAGGTCAGTGTCGAAGTCTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000180110.9
CDS-3UTR CAA 90 bp TCCTCCACCCACCAGCTCCTCAACAGACCCTTGCAGACAATGCAAACGCACCAGCCATTCAGGACTTCCTaGGCTTGCATAGCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: SSTHQLLNRPLQTMQTHQPFRTS*ACIACC
Trigger: GCAGCAGGCTATGCAAGCCAAGGAAGTCCTGAATGG...CTGGTGCGTTTGCATTGTCTGCAAGGGTCTGTTGAGGAGCTGGTGGGTGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CAA 90 bp CACTCCTTCACAAGGGACACGCACCCAGACACTCCCTTGCAGGATACTTCCCACGACTTACTGCTTGCCTaGCCTAGGCTCAGCTCCACA +
Preference number: 5 (lower is better)
Translates to: HSFTRDTHPDTPLQDTSHDLLLA*PRLSST
Trigger: TGTGGAGCTGAGCCTAGGCAAGGCAAGCAGTAAGTC...GTGGGAAGTATCCTGCAAGGGAGTGTCTGGGTGCGTGTCCCTTGTGAAGGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CAA 90 bp CACTCCTTCACAAGGGACACGCACCCAGACACTCCCTTGCAGGATACTTCCCACAGCATAGGTGATTGCTaGCTGCTGGCCGCTCAGGTA +
Preference number: 5 (lower is better)
Translates to: HSFTRDTHPDTPLQDTSHSIGDC*LLAAQV
Trigger: TACCTGAGCGGCCAGCAGCAAGCAATCACCTATGCT...GTGGGAAGTATCCTGCAAGGGAGTGTCTGGGTGCGTGTCCCTTGTGAAGGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CAA 90 bp GATGTCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGACCAGAGCCTCTGGGTaGAAGTTCTCGCTCTTGGGC +
Preference number: 5 (lower is better)
Translates to: DVSLQCLEAGFPDDFAGGTRASG*KFSLLG
Trigger: GCCCAAGAGCGAGAACTTCAACCCAGAGGCTCTGGT...CCCACCTGCAAAGTCATCAGGGAACCCAGCTTCCAGGCATTGTAGGGAGACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CAA 90 bp AAGGCAGGGGCTGATGAAGCCACATTCAGGGCCACTAAGGATGCCCGGGAGCTCTCCCCAACAGAGAGTTaGGAACACGGCAGATCAAAG +
Preference number: 5 (lower is better)
Translates to: KAGADEATFRATKDARELSPTES*EHGRSK
Trigger: CTTTGATCTGCCGTGTTCCAAACTCTCTGTTGGGGA...GAGCTCCCGGGCATCCTTAGTGGCCCTGAATGTGGCTTCATCAGCCCCTGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CAA 90 bp AGAGAAAGAGACACCCTCACTCGCACTCCTTCACAAGGGACACGCACCCAGACATGGGCGCTTCCCTGGTaGATTCCGTTTTCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: RERDTLTRTPSQGTRTQTWALPW*IPFSCS
Trigger: GGAGCAGGAAAACGGAATCAACCAGGGAAGCGCCCA...TGTCTGGGTGCGTGTCCCTTGTGAAGGAGTGCGAGTGAGGGTGTCTCTTTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CAA 90 bp GACCATCCTCCACCCACCAGCTCCTCAACAGACCCTTGCAGACAATGCAAACGCGGAATGAGCGAAGGCTaGGGAAGAGTCAAAGGTGGC +
Preference number: 5 (lower is better)
Translates to: DHPPPTSSSTDPCRQCKRGMSEG*GRVKGG
Trigger: GCCACCTTTGACTCTTCCCAAGCCTTCGCTCATTCC...GCGTTTGCATTGTCTGCAAGGGTCTGTTGAGGAGCTGGTGGGTGGAGGATGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS GCA 90 bp GGACCACCACATGCCTGGACTCATAGGGATGAGGCACTGACTTACTaGTTGCCTTGCCTAGGCTCAGCTCCACAGAAGATGATGCCCCAT +
Preference number: 5 (lower is better)
Translates to: GPPHAWTHRDEALTY*LPCLGSAPQKMMPH
Trigger: ATGGGGCATCATCTTCTGTGGAGCTGAGCCTAGGCAAGGCAAGCAGTAAGTCAGTGCCTCATCCCTATGAGTCCAGGCATGTGGTGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CCA 90 bp CGTCCCCAACAGAGAGTTTGGAACACGGCAGATCAAAGAGCTGGCTaGTCCGCTCAGGACAGCAGGATGACCAGCCCTGTCCAAATACAA +
Preference number: 5 (lower is better)
Translates to: RPQQRVWNTADQRAG*SAQDSRMTSPVQIQ
Trigger: TTGTATTTGGACAGGGCTGGTCATCCTGCTGTCCTGAGCGGACCAGCCAGCTCTTTGATCTGCCGTGTTCCAAACTCTCTGTTGGGGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CCA 90 bp GGAAACTTCAGTTCGCCATTCTCAGAGAGCACCTGGGCGCTTCCCTaGTTGATTCCGTTTTCCTGCTCCGCGTATCTGTGTCTGCTGCCA +
Preference number: 5 (lower is better)
Translates to: GNFSSPFSESTWALP*LIPFSCSAYLCLLP
Trigger: TGGCAGCAGACACAGATACGCGGAGCAGGAAAACGGAATCAACCAGGGAAGCGCCCAGGTGCTCTCTGAGAATGGCGAACTGAAGTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CAA 90 bp ATGTCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGAGGAGGCAGGCATTCGTaGCTCCGCTCTTGGTTGGAT +
Preference number: 5 (lower is better)
Translates to: MSPYNAWKLGSLMTLQVGGGRHS*LRSWLD
Trigger: ATCCAACCAAGAGCGGAGCAACGAATGCCTGCCTCC...TCCCACCTGCAAAGTCATCAGGGAACCCAGCTTCCAGGCATTGTAGGGAGACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CAA 90 bp TCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGAAACGGAGGCAGGCATTCGTaGCTCCGCTCTTGGTTGGAT +
Preference number: 5 (lower is better)
Translates to: SPYNAWKLGSLMTLQVGNGGRHS*LRSWLD
Trigger: ATCCAACCAAGAGCGGAGCAACGAATGCCTGCCTCC...GTTTCCCACCTGCAAAGTCATCAGGGAACCCAGCTTCCAGGCATTGTAGGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CAA 90 bp CCATCTGCCTGTCTGATGTCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGATGGGGATCTCACGTTTCTaGGGAGGCAGGCATTCGTTG +
Preference number: 5 (lower is better)
Translates to: PSACLMSPYNAWKLGSLMGISRF*GGRHSL
Trigger: CAACGAATGCCTGCCTCCCAAGAAACGTGAGATCCC...CATCAGGGAACCCAGCTTCCAGGCATTGTAGGGAGACATCAGACAGGCAGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CAA 90 bp TACTTAGCCTACAGTACAGTAATCTGGATACAGACAGTAAAAGGAGGCCCCGGGACGGTGGGCAGCGTGTaGGCTGTGGGGACTGACCTG +
Preference number: 5 (lower is better)
Translates to: YLAYSTVIWIQTVKGGPGTVGSV*AVGTDL
Trigger: CAGGTCAGTCCCCACAGCCAACACGCTGCCCACCGT...CCCGGGGCCTCCTTTTACTGTCTGTATCCAGATTACTGTACTGTAGGCTAAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CAA 90 bp TCCTCCACCCACCAGCTCCTCAACAGACCCTTGCAGACAATGCAAACGCACCAGGTAAGGCCCACTGTATaGGGAGGACCCAATGAACTG +
Preference number: 5 (lower is better)
Translates to: SSTHQLLNRPLQTMQTHQVRPTV*GGPNEL
Trigger: CAGTTCATTGGGTCCTCCCAATACAGTGGGCCTTAC...CTGGTGCGTTTGCATTGTCTGCAAGGGTCTGTTGAGGAGCTGGTGGGTGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CAA 90 bp AGAGAAAGAGACACCCTCACTCGCACTCCTTCACAAGGGACACGCACCCAGACAGACTTACTGCTTGCCTaGCCTAGGCTCAGCTCCACA +
Preference number: 5 (lower is better)
Translates to: RERDTLTRTPSQGTRTQTDLLLA*PRLSST
Trigger: TGTGGAGCTGAGCCTAGGCAAGGCAAGCAGTAAGTC...TGTCTGGGTGCGTGTCCCTTGTGAAGGAGTGCGAGTGAGGGTGTCTCTTTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CAA 90 bp ACCATCCTCCACCCACCAGCTCCTCAACAGACCCTTGCAGACAATGCAAACGCAGCACTGACTTACTGCTaGCCTTGCCTAGGCTCAGCT +
Preference number: 5 (lower is better)
Translates to: TILHPPAPQQTLADNANAALTYC*PCLGSA
Trigger: AGCTGAGCCTAGGCAAGGCAAGCAGTAAGTCAGTGC...TGCGTTTGCATTGTCTGCAAGGGTCTGTTGAGGAGCTGGTGGGTGGAGGATGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CAA 90 bp TTCCCATCTGCCTGTCTGATGTCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGAGCATAGGTGATTGCTaGCTGCTGGCCGCTCAGGTA +
Preference number: 5 (lower is better)
Translates to: FPSACLMSPYNAWKLGSLSIGDC*LLAAQV
Trigger: TACCTGAGCGGCCAGCAGCAAGCAATCACCTATGCT...CAGGGAACCCAGCTTCCAGGCATTGTAGGGAGACATCAGACAGGCAGATGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CAA 90 bp TCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGAAACTGGGCGCTTCCCTGGTaGATTCCGTTTTCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: SPYNAWKLGSLMTLQVGNWALPW*IPFSCS
Trigger: GGAGCAGGAAAACGGAATCAACCAGGGAAGCGCCCA...GTTTCCCACCTGCAAAGTCATCAGGGAACCCAGCTTCCAGGCATTGTAGGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CAA 90 bp ACTAGTTTCCCATCTGCCTGTCTGATGTCTCCCTACAATGCCTGGAAGCTGGGTGGAGGCAGGCATTCGTaGCTCCGCTCTTGGTTGGAT +
Preference number: 5 (lower is better)
Translates to: TSFPSACLMSPYNAWKLGGGRHS*LRSWLD
Trigger: ATCCAACCAAGAGCGGAGCAACGAATGCCTGCCTCC...ACCCAGCTTCCAGGCATTGTAGGGAGACATCAGACAGGCAGATGGGAAACTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CAA 90 bp CTACAGTACAGTAATCTGGATACAGACAGTAAAAGGAGGCCCCGGGCCTCCGCTCCATTCAGGACTTCCTaGGCTTGCATAGCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: LQYSNLDTDSKRRPRASAPFRTS*ACIACC
Trigger: GCAGCAGGCTATGCAAGCCAAGGAAGTCCTGAATGG...AGCGGAGGCCCGGGGCCTCCTTTTACTGTCTGTATCCAGATTACTGTACTGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CAA 90 bp ATGTCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGACCATTCAGGACTTCCTaGGCTTGCATAGCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: MSPYNAWKLGSLMTLQVGPFRTS*ACIACC
Trigger: GCAGCAGGCTATGCAAGCCAAGGAAGTCCTGAATGG...TCCCACCTGCAAAGTCATCAGGGAACCCAGCTTCCAGGCATTGTAGGGAGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CAA 90 bp ATGTCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGAGACTTACTGCTTGCCTaGCCTAGGCTCAGCTCCACA +
Preference number: 5 (lower is better)
Translates to: MSPYNAWKLGSLMTLQVGDLLLA*PRLSST
Trigger: TGTGGAGCTGAGCCTAGGCAAGGCAAGCAGTAAGTC...TCCCACCTGCAAAGTCATCAGGGAACCCAGCTTCCAGGCATTGTAGGGAGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CAA 90 bp GATGTCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGCCATTCTTCAGGTTCTaGAGGGTGAGCGAGATGCAG +
Preference number: 5 (lower is better)
Translates to: DVSLQCLEAGFPDDFAGGPFFRF*RVSEMQ
Trigger: CTGCATCTCGCTCACCCTCAAGAACCTGAAGAATGG...CCCACCTGCAAAGTCATCAGGGAACCCAGCTTCCAGGCATTGTAGGGAGACATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CAA 90 bp CTCAACAGACCCTTGCAGACAATGCAAACGCACCAGTCTCCTGCGACACACCTGCCATTCTTCAGGTTCTaGAGGGTGAGCGAGATGCAG +
Preference number: 5 (lower is better)
Translates to: LNRPLQTMQTHQSPATHLPFFRF*RVSEMQ
Trigger: CTGCATCTCGCTCACCCTCAAGAACCTGAAGAATGG...CAGGTGTGTCGCAGGAGACTGGTGCGTTTGCATTGTCTGCAAGGGTCTGTTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS TCA 90 bp TACTTGCCCACGTTAGATCGGCCTTCGATGCAGATCTTAACCTCCTaGGGAATGAGCGAAGGCTTGGGAAGAGTCAAAGGTGGCTCGTCC +
Preference number: 5 (lower is better)
Translates to: YLPTLDRPSMQILTS*GMSEGLGRVKGGSS
Trigger: GGACGAGCCACCTTTGACTCTTCCCAAGCCTTCGCTCATTCCTCAGGAGGTTAAGATCTGCATCGAAGGCCGATCTAACGTGGGCAAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CAA 90 bp CGCACTCCTTCACAAGGGACACGCACCCAGACACTCCCTTGCAGGATACTTCCCGTACTGGAGTCGATCTaGAGGTCATTGCTAATCTCT +
Preference number: 5 (lower is better)
Translates to: RTPSQGTRTQTLPCRILPVLESI*RSLLIS
Trigger: AGAGATTAGCAATGACCTCAAGATCGACTCCAGTAC...GGGAAGTATCCTGCAAGGGAGTGTCTGGGTGCGTGTCCCTTGTGAAGGAGTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CAA 90 bp TGCCTGTCTGATGTCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGATGACTTTGTAAGGCCCACTGTATaGGGAGGACCCAATGAACTG +
Preference number: 5 (lower is better)
Translates to: CLSDVSLQCLEAGFPDDFVRPTV*GGPNEL
Trigger: CAGTTCATTGGGTCCTCCCAATACAGTGGGCCTTAC...AAAGTCATCAGGGAACCCAGCTTCCAGGCATTGTAGGGAGACATCAGACAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CAA 90 bp GATGTCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGTCGATCTTGAGGTCATaGCTAATCTCTGCACTCTGG +
Preference number: 5 (lower is better)
Translates to: DVSLQCLEAGFPDDFAGGSILRS*LISALW
Trigger: CCAGAGTGCAGAGATTAGCAATGACCTCAAGATCGA...CCCACCTGCAAAGTCATCAGGGAACCCAGCTTCCAGGCATTGTAGGGAGACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CAA 90 bp ATGTCTCCCTACAATGCCTGGAAGCTGGGTTCCCTGATGACTTTGCAGGTGGGATCCCCAACAGAGAGTTaGGAACACGGCAGATCAAAG +
Preference number: 5 (lower is better)
Translates to: MSPYNAWKLGSLMTLQVGSPTES*EHGRSK
Trigger: CTTTGATCTGCCGTGTTCCAAACTCTCTGTTGGGGA...TCCCACCTGCAAAGTCATCAGGGAACCCAGCTTCCAGGCATTGTAGGGAGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CAA 90 bp AGAGTCGAAAGTGAGATACAGTACTTGTTGAATGACAGACCAAGATGCTTGGTTACGGTGGGCAGCGTGTaGGCTGTGGGGACTGACCTG +
Preference number: 5 (lower is better)
Translates to: RVESEIQYLLNDRPRCLVTVGSV*AVGTDL
Trigger: CAGGTCAGTCCCCACAGCCAACACGCTGCCCACCGT...AACCAAGCATCTTGGTCTGTCATTCAACAAGTACTGTATCTCACTTTCGACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
CDS-3UTR CAA 90 bp CTTGCAGGATACTTCCCACTGTGTTTGTTCTTGAAACCAGTGGGAACTGATGCCGCACTGACTTACTGCTaGCCTTGCCTAGGCTCAGCT +
Preference number: 5 (lower is better)
Translates to: LAGYFPLCLFLKPVGTDAALTYC*PCLGSA
Trigger: AGCTGAGCCTAGGCAAGGCAAGCAGTAAGTCAGTGC...GGCATCAGTTCCCACTGGTTTCAAGAACAAACACAGTGGGAAGTATCCTGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CAA 90 bp CTCGTCTTGAACGTGCAGCATTATATTGCAATCTGTGCAGTAGCTAAGGAGCAAGCCGATGACAGGAGGTaGAGTGCCAGCGTAGAAGGC +
Preference number: 5 (lower is better)
Translates to: LVLNVQHYIAICAVAKEQADDRR*SASVEG
Trigger: GCCTTCTACGCTGGCACTCAACCTCCTGTCATCGGC...TTGCTCCTTAGCTACTGCACAGATTGCAATATAATGCTGCACGTTCAAGACGAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
CDS-3UTR CAA 90 bp CTACAGTACAGTAATCTGGATACAGACAGTAAAAGGAGGCCCCGGGCCTCCGCTTCGATCTTGAGGTCATaGCTAATCTCTGCACTCTGG +
Preference number: 5 (lower is better)
Translates to: LQYSNLDTDSKRRPRASASILRS*LISALW
Trigger: CCAGAGTGCAGAGATTAGCAATGACCTCAAGATCGA...AGCGGAGGCCCGGGGCCTCCTTTTACTGTCTGTATCCAGATTACTGTACTGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CAA 90 bp TACTTAGCCTACAGTACAGTAATCTGGATACAGACAGTAAAAGGAGGCCCCGGGCTCGTGGCTGTGGGTTaGCTCGGTTCTATTTTGCTG +
Preference number: 5 (lower is better)
Translates to: YLAYSTVIWIQTVKGGPGLVAVG*LGSILL
Trigger: CAGCAAAATAGAACCGAGCAAACCCACAGCCACGAG...CCCGGGGCCTCCTTTTACTGTCTGTATCCAGATTACTGTACTGTAGGCTAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CAA 90 bp CAGTCTCCTGCGACACACCTGTTTGACTCTAATGACAAGGTTAGAATACAAACCGTAAGGCCCACTGTATaGGGAGGACCCAATGAACTG +
Preference number: 5 (lower is better)
Translates to: QSPATHLFDSNDKVRIQTVRPTV*GGPNEL
Trigger: CAGTTCATTGGGTCCTCCCAATACAGTGGGCCTTAC...GGTTTGTATTCTAACCTTGTCATTAGAGTCAAACAGGTGTGTCGCAGGAGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CAA 90 bp TACTTAGCCTACAGTACAGTAATCTGGATACAGACAGTAAAAGGAGGCCCCGGGTCGATCTTGAGGTCATaGCTAATCTCTGCACTCTGG +
Preference number: 5 (lower is better)
Translates to: YLAYSTVIWIQTVKGGPGSILRS*LISALW
Trigger: CCAGAGTGCAGAGATTAGCAATGACCTCAAGATCGA...CCCGGGGCCTCCTTTTACTGTCTGTATCCAGATTACTGTACTGTAGGCTAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS-3UTR CAA 90 bp AAATCGCAAAGTTCTTTAGAAGTTCGTCCTAAAAACACTGGACACAACCGAGTGTGGGCGCTTCCCTGGTaGATTCCGTTTTCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: KSQSSLEVRPKNTGHNRVWALPW*IPFSCS
Trigger: GGAGCAGGAAAACGGAATCAACCAGGGAAGCGCCCA...CACTCGGTTGTGTCCAGTGTTTTTAGGACGAACTTCTAAAGAACTTTGCGATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
CDS-3UTR CAA 90 bp AAACTGAGTTGGATGAATCGAGAAAAGCAAAATGTGACCAACATAGACGATTATGTACTGGAGTCGATCTaGAGGTCATTGCTAATCTCT +
Preference number: 5 (lower is better)
Translates to: KLSWMNREKQNVTNIDDYVLESI*RSLLIS
Trigger: AGAGATTAGCAATGACCTCAAGATCGACTCCAGTAC...ATAATCGTCTATGTTGGTCACATTTTGCTTTTCTCGATTCATCCAACTCAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091628.11
CDS CCA 72 bp GCCGCCCACCCCCATGGCCGCGGATGCCAGGGGTGCTaGGGAGCCAGGCCACACCCTCCACGCAGTGGTTGT +
Preference number: 6 (lower is better)
Translates to: AAHPHGRGCQGC*GARPHPPRSGC
Trigger: ACAACCACTGCGTGGAGGGTGTGGCCTGGCTCCCCAGCACCCCTGGCATCCGCGGCCATGGGGGTGGGCGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS GCA 72 bp AGCGTGGGAGACGCCGTGGTGGGGGACGCCACGGACTaGACCACCGGCAGGTGGATCTGGGCCTGCACCATG +
Preference number: 6 (lower is better)
Translates to: SVGDAVVGDATD*TTGRWIWACTM
Trigger: CATGGTGCAGGCCCAGATCCACCTGCCGGTGGTGCAGTCCGTGGCGTCCCCCACCACGGCGTCTCCCACGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CCA 72 bp CACCCTCCACGCAGTGGTTGTCGCTGGGCAGAGCAGTaGCCTTCTCCTCCGAGGGCCGGCTGGTGGCGGGGA +
Preference number: 6 (lower is better)
Translates to: HPPRSGCRWAEQ*PSPPRAGWWRG
Trigger: TCCCCGCCACCAGCCGGCCCTCGGAGGAGAAGGCCACTGCTCTGCCCAGCGACAACCACTGCGTGGAGGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CCA 72 bp GGAGCCAGGCCACACCCTCCACGCAGTGGTTGTCGCTaGGCAGAGCAGTGGCCTTCTCCTCCGAGGGCCGGC +
Preference number: 6 (lower is better)
Translates to: GARPHPPRSGCR*AEQWPSPPRAG
Trigger: GCCGGCCCTCGGAGGAGAAGGCCACTGCTCTGCCCAGCGACAACCACTGCGTGGAGGGTGTGGCCTGGCTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CCA 72 bp GGGGTGCTGGGGAGCCAGGCCACACCCTCCACGCAGTaGTTGTCGCTGGGCAGAGCAGTGGCCTTCTCCTCC +
Preference number: 6 (lower is better)
Translates to: GVLGSQATPSTQ*LSLGRAVAFSS
Trigger: GGAGGAGAAGGCCACTGCTCTGCCCAGCGACAACCACTGCGTGGAGGGTGTGGCCTGGCTCCCCAGCACCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CCA 72 bp CTGACTGAGGAGGAGGGTACACGGTGGGCAGCGTGTTaGCTGTGGGGACTGACCTGGGGGCACTGGGTGGGG +
Preference number: 6 (lower is better)
Translates to: LTEEEGTRWAAC*LWGLTWGHWVG
Trigger: CCCCACCCAGTGCCCCCAGGTCAGTCCCCACAGCCAACACGCTGCCCACCGTGTACCCTCCTCCTCAGTCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CCA 72 bp ACACCGGGGTCCCTGACTGAGGAGGAGGGTACACGGTaGGCAGCGTGTTGGCTGTGGGGACTGACCTGGGGG +
Preference number: 6 (lower is better)
Translates to: TPGSLTEEEGTR*AACWLWGLTWG
Trigger: CCCCCAGGTCAGTCCCCACAGCCAACACGCTGCCCACCGTGTACCCTCCTCCTCAGTCAGGGACCCCGGTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CCA 72 bp CATCGTCTGATGGGGATGGAGGTGGACCGGGATGGGTaGGGGAGATGTCGCCCGCCCGGAGCTCTGTGGAGA +
Preference number: 6 (lower is better)
Translates to: HRLMGMEVDRDG*GRCRPPGALWR
Trigger: TCTCCACAGAGCTCCGGGCGGGCGACATCTCCCCCACCCATCCCGGTCCACCTCCATCCCCATCAGACGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CCA 72 bp GGATCATCGTCTGATGGGGATGGAGGTGGACCGGGATaGGTGGGGGAGATGTCGCCCGCCCGGAGCTCTGTG +
Preference number: 6 (lower is better)
Translates to: GSSSDGDGGGPG*VGEMSPARSSV
Trigger: CACAGAGCTCCGGGCGGGCGACATCTCCCCCACCCATCCCGGTCCACCTCCATCCCCATCAGACGATGATCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS TCA 72 bp TGGGCGTACTGCACAGGAGACACCGGGGTCCCTGACTaGGGAGGAGGGTACACGGTGGGCAGCGTGTTGGCT +
Preference number: 6 (lower is better)
Translates to: WAYCTGDTGVPD*GGGYTVGSVLA
Trigger: AGCCAACACGCTGCCCACCGTGTACCCTCCTCCTCAGTCAGGGACCCCGGTGTCTCCTGTGCAGTACGCCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS GCA 72 bp CTGTGTCTGCTGCCAGCCAGGCTGTCGGTCTTTGCCTaGTTCAGCAGGACGCTGGCAGGGTCCACAGGCTGG +
Preference number: 6 (lower is better)
Translates to: LCLLPARLSVFA*FSRTLAGSTGW
Trigger: CCAGCCTGTGGACCCTGCCAGCGTCCTGCTGAAGCAGGCAAAGACCGACAGCCTGGCTGGCAGCAGACACAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CCA 72 bp GCAGAGCAGTGGCCTTCTCCTCCGAGGGCCGGCTGGTaGCGGGGATCTCACGTTTCTTGGGAGGCAGGCATT +
Preference number: 6 (lower is better)
Translates to: AEQWPSPPRAGW*RGSHVSWEAGI
Trigger: AATGCCTGCCTCCCAAGAAACGTGAGATCCCCGCCACCAGCCGGCCCTCGGAGGAGAAGGCCACTGCTCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CCA 72 bp GAGGAGGAGGGTACACGGTGGGCAGCGTGTTGGCTGTaGGGACTGACCTGGGGGCACTGGGTGGGGAGTAAT +
Preference number: 6 (lower is better)
Translates to: EEEGTRWAACWL*GLTWGHWVGSN
Trigger: ATTACTCCCCACCCAGTGCCCCCAGGTCAGTCCCCACAGCCAACACGCTGCCCACCGTGTACCCTCCTCCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CCA 72 bp AGGGCTGCCCACCGGGATGAGCAGGGGCTGGTTACCTaGGATCACCAGGTGCTGCGGCAGACCACCAGCATA +
Preference number: 6 (lower is better)
Translates to: RAAHRDEQGLVT*DHQVLRQTTSI
Trigger: TATGCTGGTGGTCTGCCGCAGCACCTGGTGATCCCAGGTAACCAGCCCCTGCTCATCCCGGTGGGCAGCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CCA 72 bp TCCATGTCAGGGCTGCCCACCGGGATGAGCAGGGGCTaGTTACCTGGGATCACCAGGTGCTGCGGCAGACCA +
Preference number: 6 (lower is better)
Translates to: SMSGLPTGMSRG*LPGITRCCGRP
Trigger: TGGTCTGCCGCAGCACCTGGTGATCCCAGGTAACCAGCCCCTGCTCATCCCGGTGGGCAGCCCTGACATGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CAA 72 bp GACCTGTGGCCCGGCTTCCCTAGGTGCAGGCCGCTCTaGTCATTGAGGGTGGATGGGGAGGCCTCTCGATGC +
Preference number: 6 (lower is better)
Translates to: DLWPGFPRCRPL*SLRVDGEASRC
Trigger: GCATCGAGAGGCCTCCCCATCCACCCTCAATGACAAGAGCGGCCTGCACCTAGGGAAGCCGGGCCACAGGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS TCA 72 bp AAGGTGGGCGTACTGCACAGGAGACACCGGGGTCCCTaGCTGAGGAGGAGGGTACACGGTGGGCAGCGTGTT +
Preference number: 6 (lower is better)
Translates to: KVGVLHRRHRGP*LRRRVHGGQRV
Trigger: AACACGCTGCCCACCGTGTACCCTCCTCCTCAGTCAGGGACCCCGGTGTCTCCTGTGCAGTACGCCCACCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS TCA 72 bp GAGTGGTGGCCCCTGCAGCTGAGGCTACTGCACTGGTaGCCGGGTTGCCTGATGGGGAGATCAGCTGGGAAG +
Preference number: 6 (lower is better)
Translates to: EWWPLQLRLLHW*PGCLMGRSAGK
Trigger: CTTCCCAGCTGATCTCCCCATCAGGCAACCCGGTCACCAGTGCAGTAGCCTCAGCTGCAGGGGCCACCACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS GCA 72 bp GTGCTGCTGCGGAGGGGGCTCAACCTTATGTCCTGGTaGCTGGCTCAGACTGCCCATGTTGGCCAGCAGGGT +
Preference number: 6 (lower is better)
Translates to: VLLRRGLNLMSW*LAQTAHVGQQG
Trigger: ACCCTGCTGGCCAACATGGGCAGTCTGAGCCAGGCACCAGGACATAAGGTTGAGCCCCCTCCGCAGCAGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS GCA 72 bp CCCGGGTTGACTAATCCTGCAGCCCTGCTGAGGTGCTaGTGCGGAGGGGGCTCAACCTTATGTCCTGGTGCC +
Preference number: 6 (lower is better)
Translates to: PGLTNPAALLRC*CGGGSTLCPGA
Trigger: GGCACCAGGACATAAGGTTGAGCCCCCTCCGCAGCAGCACCTCAGCAGGGCTGCAGGATTAGTCAACCCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS GCA 72 bp CTCTTGTCATTGAGGGTGGATGGGGAGGCCTCTCGATaGGTGGTCTGCTGGGCCTCCAGGTCGGCTGAGGGT +
Preference number: 6 (lower is better)
Translates to: LLSLRVDGEASR*VVCWASRSAEG
Trigger: ACCCTCAGCCGACCTGGAGGCCCAGCAGACCACGCATCGAGAGGCCTCCCCATCCACCCTCAATGACAAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CCA 72 bp GAGGTACTGCAGCAAACTGGGGTGATGACGTCACGATaGCCGAGGCTGCCCCAGGCGTGTCCATGTCAGGGC +
Preference number: 6 (lower is better)
Translates to: EVLQQTGVMTSR*PRLPQACPCQG
Trigger: GCCCTGACATGGACACGCCTGGGGCAGCCTCGGCCATCGTGACGTCATCACCCCAGTTTGCTGCAGTACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CAA 72 bp TCCGAGGGCCGGCTGGTGGCGGGGATCTCACGTTTCTaGGGAGGCAGGCATTCGTTGCTCCGCTCTTGGTTG +
Preference number: 6 (lower is better)
Translates to: SEGRLVAGISRF*GGRHSLLRSWL
Trigger: CAACCAAGAGCGGAGCAACGAATGCCTGCCTCCCAAGAAACGTGAGATCCCCGCCACCAGCCGGCCCTCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS GCA 72 bp GGGTTGACTAATCCTGCAGCCCTGCTGAGGTGCTGCTaGGGAGGGGGCTCAACCTTATGTCCTGGTGCCTGG +
Preference number: 6 (lower is better)
Translates to: GLTNPAALLRCC*GGGSTLCPGAW
Trigger: CCAGGCACCAGGACATAAGGTTGAGCCCCCTCCGCAGCAGCACCTCAGCAGGGCTGCAGGATTAGTCAACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS GCA 72 bp GACCCCGGGTTGACTAATCCTGCAGCCCTGCTGAGGTaGTGCTGCGGAGGGGGCTCAACCTTATGTCCTGGT +
Preference number: 6 (lower is better)
Translates to: DPGLTNPAALLR*CCGGGSTLCPG
Trigger: ACCAGGACATAAGGTTGAGCCCCCTCCGCAGCAGCACCTCAGCAGGGCTGCAGGATTAGTCAACCCGGGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS GCA 72 bp TCCACGGACCCCGGAGGTATCACGACTGCTGTAGTCTaGTGGGCTTGGGTGGACCACCACATGCCTGGACTC +
Preference number: 6 (lower is better)
Translates to: STDPGGITTAVV*WAWVDHHMPGL
Trigger: GAGTCCAGGCATGTGGTGGTCCACCCAAGCCCAGCAGACTACAGCAGTCGTGATACCTCCGGGGTCCGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS GCA 72 bp GTATCTGTGTCTGCTGCCAGCCAGGCTGTCGGTCTTTaGCTGCTTCAGCAGGACGCTGGCAGGGTCCACAGG +
Preference number: 6 (lower is better)
Translates to: VSVSAASQAVGL*LLQQDAGRVHR
Trigger: CCTGTGGACCCTGCCAGCGTCCTGCTGAAGCAGGCAAAGACCGACAGCCTGGCTGGCAGCAGACACAGATAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CCA 72 bp GTCGCCCGCCCGGAGCTCTGTGGAGAGCTGGAAATATaGATGTACTGGTTCTGCTGGGTGGGTGGAGGAGGG +
Preference number: 6 (lower is better)
Translates to: VARPELCGELEI*MYWFCWVGGGG
Trigger: CCCTCCTCCACCCACCCAGCAGAACCAGTACATCCATATTTCCAGCTCTCCACAGAGCTCCGGGCGGGCGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CAA 90 bp TGGGATCACCAGGTGCTGCGGCAGACCACCAGCATAGGTGATTGCTaGCTGCTGGCCGCTCAGGTAGCCGATGACAGGAGGTTGAGTGCC +
Preference number: 6 (lower is better)
Translates to: WDHQVLRQTTSIGDC*LLAAQVADDRRLSA
Trigger: GGCACTCAACCTCCTGTCATCGGCTACCTGAGCGGCCAGCAGCAAGCAATCACCTATGCTGGTGGTCTGCCGCAGCACCTGGTGATCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CAA 90 bp CGGGTCTCCGGCGCCGACCACCTCCTCTTCCTCGTGGCTGTGGGTTaGCTCGGTTCTATTTTGCTGAGGAAGGGTGCTGCAGGCAATCCT +
Preference number: 6 (lower is better)
Translates to: RVSGADHLLFLVAVG*LGSILLRKGAAGNP
Trigger: AGGATTGCCTGCAGCACCCTTCCTCAGCAAAATAGAACCGAGCAAACCCACAGCCACGAGGAAGAGGAGGTGGTCGGCGCCGGAGACCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS GCA 72 bp AGCACCTGGGCGCTTCCCTGGTTGATTCCGTTTTCCTaGTCCGCGTATCTGTGTCTGCTGCCAGCCAGGCTG +
Preference number: 6 (lower is better)
Translates to: STWALPWLIPFS*SAYLCLLPARL
Trigger: CAGCCTGGCTGGCAGCAGACACAGATACGCGGAGCAGGAAAACGGAATCAACCAGGGAAGCGCCCAGGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CAA 72 bp GCCCCTGCAGCTGAGGCTACTGCACTGGTGACCGGGTaGCCTGATGGGGAGATCAGCTGGGAAGGGATAAAG +
Preference number: 6 (lower is better)
Translates to: APAAEATALVTG*PDGEISWEGIK
Trigger: CTTTATCCCTTCCCAGCTGATCTCCCCATCAGGCAACCCGGTCACCAGTGCAGTAGCCTCAGCTGCAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CAA 90 bp ATCCACGGACCCCGGAGGTATCACGACTGCTGTAGTCTGCTGGGCTaGGGTGGACCACCACATGCCTGGACTCATAGGGATGAGGCACTG +
Preference number: 6 (lower is better)
Translates to: IHGPRRYHDCCSLLG*GGPPHAWTHRDEAL
Trigger: CAGTGCCTCATCCCTATGAGTCCAGGCATGTGGTGGTCCACCCAAGCCCAGCAGACTACAGCAGTCGTGATACCTCCGGGGTCCGTGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS GCA 72 bp CCATCACAGATCCACGGACCCCGGAGGTATCACGACTaGTGTAGTCTGCTGGGCTTGGGTGGACCACCACAT +
Preference number: 6 (lower is better)
Translates to: PSQIHGPRRYHD*CSLLGLGGPPH
Trigger: ATGTGGTGGTCCACCCAAGCCCAGCAGACTACAGCAGTCGTGATACCTCCGGGGTCCGTGGATCTGTGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CCA 72 bp TGGGAGGACCCAATGAACTGGAAGGTATGCGAAAGGTaGGCGTACTGCACAGGAGACACCGGGGTCCCTGAC +
Preference number: 6 (lower is better)
Translates to: WEDPMNWKVCER*AYCTGDTGVPD
Trigger: GTCAGGGACCCCGGTGTCTCCTGTGCAGTACGCCCACCTTTCGCATACCTTCCAGTTCATTGGGTCCTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CCA 72 bp GATGGGTGGGGGAGATGTCGCCCGCCCGGAGCTCTGTaGAGAGCTGGAAATATGGATGTACTGGTTCTGCTG +
Preference number: 6 (lower is better)
Translates to: DGWGRCRPPGAL*RAGNMDVLVLL
Trigger: CAGCAGAACCAGTACATCCATATTTCCAGCTCTCCACAGAGCTCCGGGCGGGCGACATCTCCCCCACCCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CCA 72 bp CCCGGAGGTATCACGACTGCTGTAGTCTGCTGGGCTTaGGTGGACCACCACATGCCTGGACTCATAGGGATG +
Preference number: 6 (lower is better)
Translates to: PGGITTAVVCWA*VDHHMPGLIGM
Trigger: CATCCCTATGAGTCCAGGCATGTGGTGGTCCACCCAAGCCCAGCAGACTACAGCAGTCGTGATACCTCCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CCA 72 bp ACGGACCCCGGAGGTATCACGACTGCTGTAGTCTGCTaGGCTTGGGTGGACCACCACATGCCTGGACTCATA +
Preference number: 6 (lower is better)
Translates to: TDPGGITTAVVC*AWVDHHMPGLI
Trigger: TATGAGTCCAGGCATGTGGTGGTCCACCCAAGCCCAGCAGACTACAGCAGTCGTGATACCTCCGGGGTCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CCA 72 bp CCAACAGCAAACTGTATCACGGCCACCCCGGGGCTGTaGCTCTCCTCGATTCTCTCCACAGTACTGGAGTCG +
Preference number: 6 (lower is better)
Translates to: PTANCITATPGL*LSSILSTVLES
Trigger: CGACTCCAGTACTGTGGAGAGAATCGAGGAGAGCCACAGCCCCGGGGTGGCCGTGATACAGTTTGCTGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CAA 72 bp CCCCGGAGGTATCACGACTGCTGTAGTCTGCTGGGCTaGGGTGGACCACCACATGCCTGGACTCATAGGGAT +
Preference number: 6 (lower is better)
Translates to: PRRYHDCCSLLG*GGPPHAWTHRD
Trigger: ATCCCTATGAGTCCAGGCATGTGGTGGTCCACCCAAGCCCAGCAGACTACAGCAGTCGTGATACCTCCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CAA 72 bp GGCGCCGACCACCTCCTCTTCCTCGTGGCTGTGGGTTaGCTCGGTTCTATTTTGCTGAGGAAGGGTGCTGCA +
Preference number: 6 (lower is better)
Translates to: GADHLLFLVAVG*LGSILLRKGAA
Trigger: TGCAGCACCCTTCCTCAGCAAAATAGAACCGAGCAAACCCACAGCCACGAGGAAGAGGAGGTGGTCGGCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS TCA 72 bp TTCTCGCTCTTGGGCAGGGCGGTGGTGACAAACGTGTaGGGTACTGCAGCAAACTGGGGTGATGACGTCACG +
Preference number: 6 (lower is better)
Translates to: FSLLGRAVVTNV*GTAANWGDDVT
Trigger: CGTGACGTCATCACCCCAGTTTGCTGCAGTACCTCACACGTTTGTCACCACCGCCCTGCCCAAGAGCGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS TCA 72 bp CGCCATTCTCAGAGAGCACCTGGGCGCTTCCCTGGTTaGTTCCGTTTTCCTGCTCCGCGTATCTGTGTCTGC +
Preference number: 6 (lower is better)
Translates to: RHSQRAPGRFPG*FRFPAPRICVC
Trigger: GCAGACACAGATACGCGGAGCAGGAAAACGGAATCAACCAGGGAAGCGCCCAGGTGCTCTCTGAGAATGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS GCA 72 bp CTCTGTGGAGAGCTGGAAATATGGATGTACTGGTTCTaGTGGGTGGGTGGAGGAGGGGACCCCGGGTTGACT +
Preference number: 6 (lower is better)
Translates to: LCGELEIWMYWF*WVGGGGDPGLT
Trigger: AGTCAACCCGGGGTCCCCTCCTCCACCCACCCAGCAGAACCAGTACATCCATATTTCCAGCTCTCCACAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CCA 72 bp AAGTGGCCTCCGGCATCACTATATTGCACAACCACCTaGGATGAAGGCCCCAGGGTGAGTGTGTGCGGGATC +
Preference number: 6 (lower is better)
Translates to: KWPPASLYCTTT*DEGPRVSVCGI
Trigger: GATCCCGCACACACTCACCCTGGGGCCTTCATCCCAGGTGGTTGTGCAATATAGTGATGCCGGAGGCCACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CCA 72 bp CAGAGAGTTTGGAACACGGCAGATCAAAGAGCTGGCTaGTCCGCTCAGGACAGCAGGATGACCAGCCCTGTC +
Preference number: 6 (lower is better)
Translates to: QRVWNTADQRAG*SAQDSRMTSPV
Trigger: GACAGGGCTGGTCATCCTGCTGTCCTGAGCGGACCAGCCAGCTCTTTGATCTGCCGTGTTCCAAACTCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CCA 72 bp CCAACAGAGAGTTTGGAACACGGCAGATCAAAGAGCTaGCTGGTCCGCTCAGGACAGCAGGATGACCAGCCC +
Preference number: 6 (lower is better)
Translates to: PTESLEHGRSKS*LVRSGQQDDQP
Trigger: GGGCTGGTCATCCTGCTGTCCTGAGCGGACCAGCCAGCTCTTTGATCTGCCGTGTTCCAAACTCTCTGTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CAA 72 bp AGGGTGAGCGAGATGCAGACGTCCCCAACAGAGAGTTaGGAACACGGCAGATCAAAGAGCTGGCTGGTCCGC +
Preference number: 6 (lower is better)
Translates to: RVSEMQTSPTES*EHGRSKSWLVR
Trigger: GCGGACCAGCCAGCTCTTTGATCTGCCGTGTTCCAAACTCTCTGTTGGGGACGTCTGCATCTCGCTCACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CAA 90 bp AGGTTCTTGAGGGTGAGCGAGATGCAGACGTCCCCAACAGAGAGTTaGGAACACGGCAGATCAAAGAGCTGGCTGGTCCGCTCAGGACAG +
Preference number: 6 (lower is better)
Translates to: RFLRVSEMQTSPTES*EHGRSKSWLVRSGQ
Trigger: CTGTCCTGAGCGGACCAGCCAGCTCTTTGATCTGCCGTGTTCCAAACTCTCTGTTGGGGACGTCTGCATCTCGCTCACCCTCAAGAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CAA 90 bp AACTTCAGTTCGCCATTCTCAGAGAGCACCTGGGCGCTTCCCTGGTaGATTCCGTTTTCCTGCTCCGCGTATCTGTGTCTGCTGCCAGCC +
Preference number: 6 (lower is better)
Translates to: NFSSPFSESTWALPW*IPFSCSAYLCLLPA
Trigger: GGCTGGCAGCAGACACAGATACGCGGAGCAGGAAAACGGAATCAACCAGGGAAGCGCCCAGGTGCTCTCTGAGAATGGCGAACTGAAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS TCA 72 bp AGCCCGCGTAAGGCCCACTGTATTGGGAGGACCCAATaGACTGGAAGGTATGCGAAAGGTGGGCGTACTGCA +
Preference number: 6 (lower is better)
Translates to: SPRKAHCIGRTQ*TGRYAKGGRTA
Trigger: TGCAGTACGCCCACCTTTCGCATACCTTCCAGTTCATTGGGTCCTCCCAATACAGTGGGCCTTACGCGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS GCA 72 bp CCACTGTATTGGGAGGACCCAATGAACTGGAAGGTATaGGAAAGGTGGGCGTACTGCACAGGAGACACCGGG +
Preference number: 6 (lower is better)
Translates to: PLYWEDPMNWKV*ERWAYCTGDTG
Trigger: CCCGGTGTCTCCTGTGCAGTACGCCCACCTTTCGCATACCTTCCAGTTCATTGGGTCCTCCCAATACAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CAA 72 bp TGCATAGCCTGCTGCAACCTGCTGCTCTCGGCTTTTTaGGTGGACTCTCGAGGAACAAAGTGGCCTCCGGCA +
Preference number: 6 (lower is better)
Translates to: CIACCNLLLSAF*VDSRGTKWPPA
Trigger: TGCCGGAGGCCACTTTGTTCCTCGAGAGTCCACCAAAAAAGCCGAGAGCAGCAGGTTGCAGCAGGCTATGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CAA 72 bp CTCCGGCTTTTCTCCATCTCCCCATTCAGGACTTCCTaGGCTTGCATAGCCTGCTGCAACCTGCTGCTCTCG +
Preference number: 6 (lower is better)
Translates to: LRLFSISPFRTS*ACIACCNLLLS
Trigger: CGAGAGCAGCAGGTTGCAGCAGGCTATGCAAGCCAAGGAAGTCCTGAATGGGGAGATGGAGAAAAGCCGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CAA 72 bp TCGCCATTCTCAGAGAGCACCTGGGCGCTTCCCTGGTaGATTCCGTTTTCCTGCTCCGCGTATCTGTGTCTG +
Preference number: 6 (lower is better)
Translates to: SPFSESTWALPW*IPFSCSAYLCL
Trigger: CAGACACAGATACGCGGAGCAGGAAAACGGAATCAACCAGGGAAGCGCCCAGGTGCTCTCTGAGAATGGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CAA 90 bp GGAGATCAGCTGGGAAGGGATAAAGCCCGCGTAAGGCCCACTGTATaGGGAGGACCCAATGAACTGGAAGGTATGCGAAAGGTGGGCGTA +
Preference number: 6 (lower is better)
Translates to: GDQLGRDKARVRPTV*GGPNELEGMRKVGV
Trigger: TACGCCCACCTTTCGCATACCTTCCAGTTCATTGGGTCCTCCCAATACAGTGGGCCTTACGCGGGCTTTATCCCTTCCCAGCTGATCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CAA 90 bp CCACCACATGCCTGGACTCATAGGGATGAGGCACTGACTTACTGCTaGCCTTGCCTAGGCTCAGCTCCACAGAAGATGATGCCCCATACC +
Preference number: 6 (lower is better)
Translates to: PPHAWTHRDEALTYC*PCLGSAPQKMMPHT
Trigger: GGTATGGGGCATCATCTTCTGTGGAGCTGAGCCTAGGCAAGGCAAGCAGTAAGTCAGTGCCTCATCCCTATGAGTCCAGGCATGTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS GCA 72 bp TCTCGAGGAACAAAGTGGCCTCCGGCATCACTATATTaGACAACCACCTGGGATGAAGGCCCCAGGGTGAGT +
Preference number: 6 (lower is better)
Translates to: SRGTKWPPASLY*TTTWDEGPRVS
Trigger: ACTCACCCTGGGGCCTTCATCCCAGGTGGTTGTGCAATATAGTGATGCCGGAGGCCACTTTGTTCCTCGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CCA 72 bp TGTAGTCTGCTGGGCTTGGGTGGACCACCACATGCCTaGACTCATAGGGATGAGGCACTGACTTACTGCTTG +
Preference number: 6 (lower is better)
Translates to: CSLLGLGGPPHA*THRDEALTYCL
Trigger: CAAGCAGTAAGTCAGTGCCTCATCCCTATGAGTCCAGGCATGTGGTGGTCCACCCAAGCCCAGCAGACTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CCA 72 bp AGTTCGCCATTCTCAGAGAGCACCTGGGCGCTTCCCTaGTTGATTCCGTTTTCCTGCTCCGCGTATCTGTGT +
Preference number: 6 (lower is better)
Translates to: SSPFSESTWALP*LIPFSCSAYLC
Trigger: ACACAGATACGCGGAGCAGGAAAACGGAATCAACCAGGGAAGCGCCCAGGTGCTCTCTGAGAATGGCGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CCA 72 bp TCTGGAAACTTCAGTTCGCCATTCTCAGAGAGCACCTaGGCGCTTCCCTGGTTGATTCCGTTTTCCTGCTCC +
Preference number: 6 (lower is better)
Translates to: SGNFSSPFSEST*ALPWLIPFSCS
Trigger: GGAGCAGGAAAACGGAATCAACCAGGGAAGCGCCCAGGTGCTCTCTGAGAATGGCGAACTGAAGTTTCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CCA 72 bp TCGACACTGACCTGTATGACCCTGGTGAGGGTTACCTaGGCTCGGTGTTCACCAACAGCAAACTGTATCACG +
Preference number: 6 (lower is better)
Translates to: STLTCMTLVRVT*ARCSPTANCIT
Trigger: CGTGATACAGTTTGCTGTTGGTGAACACCGAGCCCAGGTAACCCTCACCAGGGTCATACAGGTCAGTGTCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000180110.9
CDS CAA 72 bp CTGGGAAGGGATAAAGCCCGCGTAAGGCCCACTGTATaGGGAGGACCCAATGAACTGGAAGGTATGCGAAAG +
Preference number: 6 (lower is better)
Translates to: LGRDKARVRPTV*GGPNELEGMRK
Trigger: CTTTCGCATACCTTCCAGTTCATTGGGTCCTCCCAATACAGTGGGCCTTACGCGGGCTTTATCCCTTCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CAA 72 bp GCCTGGACTCATAGGGATGAGGCACTGACTTACTGCTaGCCTTGCCTAGGCTCAGCTCCACAGAAGATGATG +
Preference number: 6 (lower is better)
Translates to: AWTHRDEALTYC*PCLGSAPQKMM
Trigger: CATCATCTTCTGTGGAGCTGAGCCTAGGCAAGGCAAGCAGTAAGTCAGTGCCTCATCCCTATGAGTCCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CAA 90 bp GGGTCCACAGGCTGGCCCTTTTTAACAGAGCCATTCTTCAGGTTCTaGAGGGTGAGCGAGATGCAGACGTCCCCAACAGAGAGTTTGGAA +
Preference number: 6 (lower is better)
Translates to: GSTGWPFLTEPFFRF*RVSEMQTSPTESLE
Trigger: TTCCAAACTCTCTGTTGGGGACGTCTGCATCTCGCTCACCCTCAAGAACCTGAAGAATGGCTCTGTTAAAAAGGGCCAGCCTGTGGACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS GCA 72 bp ACTCATAGGGATGAGGCACTGACTTACTGCTTGCCTTaGCTAGGCTCAGCTCCACAGAAGATGATGCCCCAT +
Preference number: 6 (lower is better)
Translates to: THRDEALTYCLP*LGSAPQKMMPH
Trigger: ATGGGGCATCATCTTCTGTGGAGCTGAGCCTAGGCAAGGCAAGCAGTAAGTCAGTGCCTCATCCCTATGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CAA 90 bp GGGCTGTGGCTCTCCTCGATTCTCTCCACAGTACTGGAGTCGATCTaGAGGTCATTGCTAATCTCTGCACTCTGGATGAAATCCTCCGTC +
Preference number: 6 (lower is better)
Translates to: GLWLSSILSTVLESI*RSLLISALWMKSSV
Trigger: GACGGAGGATTTCATCCAGAGTGCAGAGATTAGCAATGACCTCAAGATCGACTCCAGTACTGTGGAGAGAATCGAGGAGAGCCACAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CAA 90 bp CTCTCCTCGATTCTCTCCACAGTACTGGAGTCGATCTTGAGGTCATaGCTAATCTCTGCACTCTGGATGAAATCCTCCGTCTTCAGGTCC +
Preference number: 6 (lower is better)
Translates to: LSSILSTVLESILRS*LISALWMKSSVFRS
Trigger: GGACCTGAAGACGGAGGATTTCATCCAGAGTGCAGAGATTAGCAATGACCTCAAGATCGACTCCAGTACTGTGGAGAGAATCGAGGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS TCA 72 bp ACGTTAGATCGGCCTTCGATGCAGATCTTAACCTCCTaGGGAATGAGCGAAGGCTTGGGAAGAGTCAAAGGT +
Preference number: 6 (lower is better)
Translates to: TLDRPSMQILTS*GMSEGLGRVKG
Trigger: ACCTTTGACTCTTCCCAAGCCTTCGCTCATTCCTCAGGAGGTTAAGATCTGCATCGAAGGCCGATCTAACGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS GCA 72 bp AGTACTGGAGTCGATCTTGAGGTCATTGCTAATCTCTaGACTCTGGATGAAATCCTCCGTCTTCAGGTCCTC +
Preference number: 6 (lower is better)
Translates to: STGVDLEVIANL*TLDEILRLQVL
Trigger: GAGGACCTGAAGACGGAGGATTTCATCCAGAGTGCAGAGATTAGCAATGACCTCAAGATCGACTCCAGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CAA 72 bp ATTCTCTCCACAGTACTGGAGTCGATCTTGAGGTCATaGCTAATCTCTGCACTCTGGATGAAATCCTCCGTC +
Preference number: 6 (lower is better)
Translates to: ILSTVLESILRS*LISALWMKSSV
Trigger: GACGGAGGATTTCATCCAGAGTGCAGAGATTAGCAATGACCTCAAGATCGACTCCAGTACTGTGGAGAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9
CDS CAA 72 bp CTCTCCTCGATTCTCTCCACAGTACTGGAGTCGATCTaGAGGTCATTGCTAATCTCTGCACTCTGGATGAAA +
Preference number: 6 (lower is better)
Translates to: LSSILSTVLESI*RSLLISALWMK
Trigger: TTTCATCCAGAGTGCAGAGATTAGCAATGACCTCAAGATCGACTCCAGTACTGTGGAGAGAATCGAGGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091628.11
ENSMUST00000167708.4
ENSMUST00000180110.9