Pregenerated sensors for ATRNL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054843Ensembl transcript IDs: ENSMUST00000077282.7
Found 274 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGCAGGTTTGGCTCTTCAGGCTATCGAGCTGGAAGGAGGGGACACTaGTTGCCAGGCAGCCTCCTCCATGCCTGTCGCTTCTGGAGTGTC | + |
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Preference number: 1 (lower is better) Translates to: GRFGSSGYRAGRRGH*LPGSLLHACRFWSV Trigger: GACACTCCAGAAGCGACAGGCATGGAGGAGGCTGCCTGGCAATCAGTGTCCCCTCCTTCCAGCTCGATAGCCTGAAGAGCCAAACCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| 3UTR GCA 90 bp | TCGAGCTGGAAGGAGGGGACACTGATTGCCAGGCAGCCTCCTCCATaGCTGTCGCTTCTGGAGTGTCTCTCCCATGCTCAGAATACTGAC | + |
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Preference number: 1 (lower is better) Translates to: SSWKEGTLIARQPPP*LSLLECLSHAQNTD Trigger: GTCAGTATTCTGAGCATGGGAGAGACACTCCAGAAGCGACAGGCATGGAGGAGGCTGCCTGGCAATCAGTGTCCCCTCCTTCCAGCTCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| 3UTR CCA 90 bp | CTGGAAGAAAATGACCACTCTTGTGAAGACTCAGAGGAACCACTCTaGCCCGGCACGGCGACTCGGGGCACCAAAGCATCATGGAGTGGA | + |
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Preference number: 1 (lower is better) Translates to: LEENDHSCEDSEEPL*PGTATRGTKASWSG Trigger: TCCACTCCATGATGCTTTGGTGCCCCGAGTCGCCGTGCCGGGCCAGAGTGGTTCCTCTGAGTCTTCACAAGAGTGGTCATTTTCTTCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| 3UTR CCA 90 bp | AGCATCATGGAGTGGACCAGAAGCTCTGCTATTGAATGGCAGGTTTaGCTCTTCAGGCTATCGAGCTGGAAGGAGGGGACACTGATTGCC | + |
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Preference number: 1 (lower is better) Translates to: SIMEWTRSSAIEWQV*LFRLSSWKEGTLIA Trigger: GGCAATCAGTGTCCCCTCCTTCCAGCTCGATAGCCTGAAGAGCCAAACCTGCCATTCAATAGCAGAGCTTCTGGTCCACTCCATGATGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| 3UTR CCA 90 bp | TCCCTCTCTGTTCTTATCCGGGGCTTTGTGCCATTAGAGATGTTTTaGATGTGGCCATCAATGAACTTGTCTTTAGAATTCAGTCTCCTC | + |
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Preference number: 1 (lower is better) Translates to: SLSVLIRGFVPLEMF*MWPSMNLSLEFSLL Trigger: GAGGAGACTGAATTCTAAAGACAAGTTCATTGATGGCCACATCCAAAACATCTCTAATGGCACAAAGCCCCGGATAAGAACAGAGAGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| 3UTR CCA 90 bp | CATTTCGTAACACTTGTGAGTAAGAAGTGGCAAACAGACAGAAGCTaGAAGAAAATGACCACTCTTGTGAAGACTCAGAGGAACCACTCT | + |
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Preference number: 1 (lower is better) Translates to: HFVTLVSKKWQTDRS*KKMTTLVKTQRNHS Trigger: AGAGTGGTTCCTCTGAGTCTTCACAAGAGTGGTCATTTTCTTCCAGCTTCTGTCTGTTTGCCACTTCTTACTCACAAGTGTTACGAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| 3UTR CCA 90 bp | TCTGTTCTTATCCGGGGCTTTGTGCCATTAGAGATGTTTTGGATGTaGCCATCAATGAACTTGTCTTTAGAATTCAGTCTCCTCACAGCA | + |
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Preference number: 1 (lower is better) Translates to: SVLIRGFVPLEMFWM*PSMNLSLEFSLLTA Trigger: TGCTGTGAGGAGACTGAATTCTAAAGACAAGTTCATTGATGGCCACATCCAAAACATCTCTAATGGCACAAAGCCCCGGATAAGAACAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| 3UTR GCA 90 bp | TATATCCAAAAGGCTAGTTATCAAAATAAGACAGTCATGGTGAGATaGAACCTAACTATGCCTTATAAGATGCAACTACATAGTCTGTGG | + |
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Preference number: 1 (lower is better) Translates to: YIQKASYQNKTVMVR*NLTMPYKMQLHSLW Trigger: CCACAGACTATGTAGTTGCATCTTATAAGGCATAGTTAGGTTGCATCTCACCATGACTGTCTTATTTTGATAACTAGCCTTTTGGATATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| 3UTR-3UTR TCA 90 bp | TGTGAAGACTCAGAGGAACCACTCTGGCCCGGCACGGCGACTCGGGGCACCAAAGGACATTATCCTCTGTaGGACCCAAGGCCGCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: CEDSEEPLWPGTATRGTKGHYPL*DPRPQS Trigger: GCTCTGCGGCCTTGGGTCTCACAGAGGATAATGTCC...TTTGGTGCCCCGAGTCGCCGTGCCGGGCCAGAGTGGTTCCTCTGAGTCTTCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| 3UTR CAA 90 bp | TCTCCAACGGTCACCCTGAAGTCAGCCAGGGCCGCTCCAGACTTCTaGAGCGTTATCGAGCTGCTGCTAATGTTAGGTAGCTCTCACTGT | + |
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Preference number: 2 (lower is better) Translates to: SPTVTLKSARAAPDF*SVIELLLMLGSSHC Trigger: ACAGTGAGAGCTACCTAACATTAGCAGCAGCTCGATAACGCTCAAGAAGTCTGGAGCGGCCCTGGCTGACTTCAGGGTGACCGTTGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| 3UTR-3UTR TCA 90 bp | TGTGAAGACTCAGAGGAACCACTCTGGCCCGGCACGGCGACTCGGGGCACCAAAGTTACATTCTCAAATTaGCTCTGGAGACTGTGTGGT | + |
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Preference number: 2 (lower is better) Translates to: CEDSEEPLWPGTATRGTKVTFSN*LWRLCG Trigger: ACCACACAGTCTCCAGAGTCAATTTGAGAATGTAAC...TTTGGTGCCCCGAGTCGCCGTGCCGGGCCAGAGTGGTTCCTCTGAGTCTTCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| 3UTR-3UTR TCA 90 bp | TGTGAAGACTCAGAGGAACCACTCTGGCCCGGCACGGCGACTCGGGGCACCAAAGTTCTTTTTCTACTCTaGTGCCAATGTCCTAACTTT | + |
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Preference number: 2 (lower is better) Translates to: CEDSEEPLWPGTATRGTKVLFLL*CQCPNF Trigger: AAAGTTAGGACATTGGCATCAGAGTAGAAAAAGAAC...TTTGGTGCCCCGAGTCGCCGTGCCGGGCCAGAGTGGTTCCTCTGAGTCTTCACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| 3UTR-3UTR TCA 90 bp | GGAATGACTTTCGTGTTAAACAAAACTACAGAGAATGCAGCAGCTTCAGGACTCGGAAGGAGGGGACACTaGTTGCCAGGCAGCCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: GMTFVLNKTTENAAASGLGRRGH*LPGSLL Trigger: GAGGAGGCTGCCTGGCAATCAGTGTCCCCTCCTTCC...GAGTCCTGAAGCTGCTGCATTCTCTGTAGTTTTGTTTAACACGAAAGTCATTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| 3UTR-3UTR CCA 90 bp | GTTCTTGTGTCTCCAACGGTCACCCTGAAGTCAGCCAGGGCCGCTCCAGACTTCCCATTAGAGATGTTTTaGATGTGGCCATCAATGAAC | + |
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Preference number: 2 (lower is better) Translates to: VLVSPTVTLKSARAAPDFPLEMF*MWPSMN Trigger: GTTCATTGATGGCCACATCCAAAACATCTCTAATGG...GAAGTCTGGAGCGGCCCTGGCTGACTTCAGGGTGACCGTTGGAGACACAAGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| 3UTR-3UTR CCA 90 bp | CTTGTACATTGTTCTTGTGTCTCCAACGGTCACCCTGAAGTCAGCCAGGGCCGCGATAGCTACCACGTTTaGTTTCCCTCTCTGTTCTTA | + |
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Preference number: 2 (lower is better) Translates to: LVHCSCVSNGHPEVSQGRDSYHV*FPSLFL Trigger: TAAGAACAGAGAGGGAAACCAAACGTGGTAGCTATC...GCGGCCCTGGCTGACTTCAGGGTGACCGTTGGAGACACAAGAACAATGTACAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| 3UTR-3UTR CCA 90 bp | CTTGTACATTGTTCTTGTGTCTCCAACGGTCACCCTGAAGTCAGCCAGGGCCGCCAAACAGACAGAAGCTaGAAGAAAATGACCACTCTT | + |
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Preference number: 2 (lower is better) Translates to: LVHCSCVSNGHPEVSQGRQTDRS*KKMTTL Trigger: AAGAGTGGTCATTTTCTTCCAGCTTCTGTCTGTTTG...GCGGCCCTGGCTGACTTCAGGGTGACCGTTGGAGACACAAGAACAATGTACAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| 3UTR-3UTR CCA 90 bp | CCCCTCCACAGGTCTGGTCTACCTTCCTCGTTGGCAATTAAACAAACTGCGCAAGTGACTGTACAACCATaGCATGCAGTAACTAGGCAT | + |
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Preference number: 2 (lower is better) Translates to: PLHRSGLPSSLAIKQTAQVTVQP*HAVTRH Trigger: ATGCCTAGTTACTGCATGCCATGGTTGTACAGTCAC...TTGCGCAGTTTGTTTAATTGCCAACGAGGAAGGTAGACCAGACCTGTGGAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| 3UTR-3UTR TCA 90 bp | CCCCTCCACAGGTCTGGTCTACCTTCCTCGTTGGCAATTAAACAAACTGCGCAAGAGAATTTAAACACGTaGCCTACAACCTTGCTTTCC | + |
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Preference number: 2 (lower is better) Translates to: PLHRSGLPSSLAIKQTAQENLNT*PTTLLS Trigger: GGAAAGCAAGGTTGTAGGTCACGTGTTTAAATTCTC...TTGCGCAGTTTGTTTAATTGCCAACGAGGAAGGTAGACCAGACCTGTGGAGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| 3UTR-3UTR CCA 90 bp | GGAATGACTTTCGTGTTAAACAAAACTACAGAGAATGCAGCAGCTTCAGGACTCGGCACCAAAGCATCATaGAGTGGACCAGAAGCTCTG | + |
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Preference number: 2 (lower is better) Translates to: GMTFVLNKTTENAAASGLGTKAS*SGPEAL Trigger: CAGAGCTTCTGGTCCACTCCATGATGCTTTGGTGCC...GAGTCCTGAAGCTGCTGCATTCTCTGTAGTTTTGTTTAACACGAAAGTCATTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| 3UTR-3UTR CCA 90 bp | CCCCTCCACAGGTCTGGTCTACCTTCCTCGTTGGCAATTAAACAAACTGCGCAAGAGATGTTTTGGATGTaGCCATCAATGAACTTGTCT | + |
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Preference number: 2 (lower is better) Translates to: PLHRSGLPSSLAIKQTAQEMFWM*PSMNLS Trigger: AGACAAGTTCATTGATGGCCACATCCAAAACATCTC...TTGCGCAGTTTGTTTAATTGCCAACGAGGAAGGTAGACCAGACCTGTGGAGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| 3UTR CAA 90 bp | GGCTTTGTGCCATTAGAGATGTTTTGGATGTGGCCATCAATGAACTaGTCTTTAGAATTCAGTCTCCTCACAGCACCATGTGACTGTGTT | + |
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Preference number: 2 (lower is better) Translates to: GFVPLEMFWMWPSMN*SLEFSLLTAPCDCV Trigger: AACACAGTCACATGGTGCTGTGAGGAGACTGAATTCTAAAGACAAGTTCATTGATGGCCACATCCAAAACATCTCTAATGGCACAAAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| 3UTR CAA 90 bp | TTCCCTCTCTGTTCTTATCCGGGGCTTTGTGCCATTAGAGATGTTTaGGATGTGGCCATCAATGAACTTGTCTTTAGAATTCAGTCTCCT | + |
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Preference number: 2 (lower is better) Translates to: FPLCSYPGLCAIRDV*DVAINELVFRIQSP Trigger: AGGAGACTGAATTCTAAAGACAAGTTCATTGATGGCCACATCCAAAACATCTCTAATGGCACAAAGCCCCGGATAAGAACAGAGAGGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| 3UTR-3UTR TCA 90 bp | GTGAGATGCAACCTAACTATGCCTTATAAGATGCAACTACATAGTCTGTGGTCACAGAAGCTCTGCTATTaGATGGCAGGTTTGGCTCTT | + |
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Preference number: 2 (lower is better) Translates to: VRCNLTMPYKMQLHSLWSQKLCY*MAGLAL Trigger: AAGAGCCAAACCTGCCATTCAATAGCAGAGCTTCTG...TGACCACAGACTATGTAGTTGCATCTTATAAGGCATAGTTAGGTTGCATCTCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| 3UTR-3UTR CCA 90 bp | AGGACCAATGCTGCCAATTTCATGGGGAAATCAACATGTAAAGTGTCCAAAAGAATTGAATGGCAGGTTTaGCTCTTCAGGCTATCGAGC | + |
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Preference number: 2 (lower is better) Translates to: RTNAANFMGKSTCKVSKRIEWQV*LFRLSS Trigger: GCTCGATAGCCTGAAGAGCCAAACCTGCCATTCAAT...TCTTTTGGACACTTTACATGTTGATTTCCCCATGAAATTGGCAGCATTGGTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| 3UTR-3UTR GCA 90 bp | GTCATGGTGAGATGCAACCTAACTATGCCTTATAAGATGCAACTACATAGTCTGAATGGCAATCACAGCTaGCAGGACTTGTTCTTTTTC | + |
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Preference number: 2 (lower is better) Translates to: VMVRCNLTMPYKMQLHSLNGNHS*QDLFFF Trigger: GAAAAAGAACAAGTCCTGGCAGCTGTGATTGCCATT...CAGACTATGTAGTTGCATCTTATAAGGCATAGTTAGGTTGCATCTCACCATGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| 3UTR CAA 90 bp | TGCCAGGACTTGTTCTTTTTCTACTCTGATGCCAATGTCCTAACTTaGCTAACGAGGCAGAAAACTGTACATTTCTCATCATTCAAGCAT | + |
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Preference number: 2 (lower is better) Translates to: CQDLFFFYSDANVLT*LTRQKTVHFSSFKH Trigger: ATGCTTGAATGATGAGAAATGTACAGTTTTCTGCCTCGTTAGCAAAGTTAGGACATTGGCATCAGAGTAGAAAAAGAACAAGTCCTGGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| 3UTR-3UTR TCA 90 bp | AGGACCAATGCTGCCAATTTCATGGGGAAATCAACATGTAAAGTGTCCAAAAGACTGACTTTATCACTGTaGCCCTCAATACTGTTACTT | + |
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Preference number: 2 (lower is better) Translates to: RTNAANFMGKSTCKVSKRLTLSL*PSILLL Trigger: AAGTAACAGTATTGAGGGTCACAGTGATAAAGTCAG...TCTTTTGGACACTTTACATGTTGATTTCCCCATGAAATTGGCAGCATTGGTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| 3UTR GCA 72 bp | AAGGAGGGGACACTGATTGCCAGGCAGCCTCCTCCATaGCTGTCGCTTCTGGAGTGTCTCTCCCATGCTCAG | + |
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Preference number: 3 (lower is better) Translates to: KEGTLIARQPPP*LSLLECLSHAQ Trigger: CTGAGCATGGGAGAGACACTCCAGAAGCGACAGGCATGGAGGAGGCTGCCTGGCAATCAGTGTCCCCTCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| 3UTR GCA 72 bp | CTTCAGGCTATCGAGCTGGAAGGAGGGGACACTGATTaGCAGGCAGCCTCCTCCATGCCTGTCGCTTCTGGA | + |
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Preference number: 3 (lower is better) Translates to: LQAIELEGGDTD*QAASSMPVASG Trigger: TCCAGAAGCGACAGGCATGGAGGAGGCTGCCTGGCAATCAGTGTCCCCTCCTTCCAGCTCGATAGCCTGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| 3UTR CCA 72 bp | AATGACCACTCTTGTGAAGACTCAGAGGAACCACTCTaGCCCGGCACGGCGACTCGGGGCACCAAAGCATCA | + |
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Preference number: 3 (lower is better) Translates to: NDHSCEDSEEPL*PGTATRGTKAS Trigger: TGATGCTTTGGTGCCCCGAGTCGCCGTGCCGGGCCAGAGTGGTTCCTCTGAGTCTTCACAAGAGTGGTCATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| 3UTR-3UTR CAA 90 bp | GTTCTTGTGTCTCCAACGGTCACCCTGAAGTCAGCCAGGGCCGCTCCAGACTTCCACCATGTGACTGTGTaGCAGATAGGGATCTTGCTG | + |
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Preference number: 3 (lower is better) Translates to: VLVSPTVTLKSARAAPDFHHVTV*QIGILL Trigger: CAGCAAGATCCCTATCTGCAACACAGTCACATGGTG...GAAGTCTGGAGCGGCCCTGGCTGACTTCAGGGTGACCGTTGGAGACACAAGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| 3UTR GCA 72 bp | CTTGCTGAGGCTTGCTGGACCCGGCTCTTGTCCGCTTaGATTCTACAGGAAGAGGTTGGTAGCAGGGAACTT | + |
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Preference number: 3 (lower is better) Translates to: LAEACWTRLLSA*ILQEEVGSREL Trigger: AAGTTCCCTGCTACCAACCTCTTCCTGTAGAATGCAAGCGGACAAGAGCCGGGTCCAGCAAGCCTCAGCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| 3UTR CCA 72 bp | ATTGAATGGCAGGTTTGGCTCTTCAGGCTATCGAGCTaGAAGGAGGGGACACTGATTGCCAGGCAGCCTCCT | + |
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Preference number: 3 (lower is better) Translates to: IEWQVWLFRLSS*KEGTLIARQPP Trigger: AGGAGGCTGCCTGGCAATCAGTGTCCCCTCCTTCCAGCTCGATAGCCTGAAGAGCCAAACCTGCCATTCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| 3UTR TCA 72 bp | TGTACCTGGCCCTGGATCATAGGACATTATCCTCTGTaGGACCCAAGGCCGCAGAGCAGCTTTAACGGAAGC | + |
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Preference number: 3 (lower is better) Translates to: CTWPWIIGHYPL*DPRPQSSFNGS Trigger: GCTTCCGTTAAAGCTGCTCTGCGGCCTTGGGTCTCACAGAGGATAATGTCCTATGATCCAGGGCCAGGTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| 3UTR CCA 72 bp | GAGTGGACCAGAAGCTCTGCTATTGAATGGCAGGTTTaGCTCTTCAGGCTATCGAGCTGGAAGGAGGGGACA | + |
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Preference number: 3 (lower is better) Translates to: EWTRSSAIEWQV*LFRLSSWKEGT Trigger: TGTCCCCTCCTTCCAGCTCGATAGCCTGAAGAGCCAAACCTGCCATTCAATAGCAGAGCTTCTGGTCCACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| 3UTR CCA 72 bp | AGCATCATGGAGTGGACCAGAAGCTCTGCTATTGAATaGCAGGTTTGGCTCTTCAGGCTATCGAGCTGGAAG | + |
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Preference number: 3 (lower is better) Translates to: SIMEWTRSSAIE*QVWLFRLSSWK Trigger: CTTCCAGCTCGATAGCCTGAAGAGCCAAACCTGCCATTCAATAGCAGAGCTTCTGGTCCACTCCATGATGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| 3UTR TCA 72 bp | CCAAGGCCGCAGAGCAGCTTTAACGGAAGCAATTTGTaGAGTAAACCGACACATAGTACAGAGCTGGTTCCC | + |
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Preference number: 3 (lower is better) Translates to: PRPQSSFNGSNL*SKPTHSTELVP Trigger: GGGAACCAGCTCTGTACTATGTGTCGGTTTACTTCACAAATTGCTTCCGTTAAAGCTGCTCTGCGGCCTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| 3UTR-3UTR CAA 90 bp | GGAATGACTTTCGTGTTAAACAAAACTACAGAGAATGCAGCAGCTTCAGGACTCCCGGCTCTTGTCCGCTaGCATTCTACAGGAAGAGGT | + |
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Preference number: 3 (lower is better) Translates to: GMTFVLNKTTENAAASGLPALVR*HSTGRG Trigger: ACCTCTTCCTGTAGAATGCAAGCGGACAAGAGCCGG...GAGTCCTGAAGCTGCTGCATTCTCTGTAGTTTTGTTTAACACGAAAGTCATTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| 3UTR-3UTR CAA 90 bp | CCCCTCCACAGGTCTGGTCTACCTTCCTCGTTGGCAATTAAACAAACTGCGCAAGCCATTAGAGATGTTTaGGATGTGGCCATCAATGAA | + |
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Preference number: 3 (lower is better) Translates to: PLHRSGLPSSLAIKQTAQAIRDV*DVAINE Trigger: TTCATTGATGGCCACATCCAAAACATCTCTAATGGC...TTGCGCAGTTTGTTTAATTGCCAACGAGGAAGGTAGACCAGACCTGTGGAGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| 3UTR CCA 72 bp | GACAGCCCCTCCACAGGTCTGGTCTACCTTCCTCGTTaGCAATTAAACAAACTGCGCAACTCTTTCATTTTT | + |
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Preference number: 3 (lower is better) Translates to: DSPSTGLVYLPR*QLNKLRNSFIF Trigger: AAAAATGAAAGAGTTGCGCAGTTTGTTTAATTGCCAACGAGGAAGGTAGACCAGACCTGTGGAGGGGCTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| 3UTR-3UTR CAA 90 bp | GTCATGGTGAGATGCAACCTAACTATGCCTTATAAGATGCAACTACATAGTCTGGCAGTCTCTGGCCTCTaGGGACATTGTCCACTTAGA | + |
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Preference number: 3 (lower is better) Translates to: VMVRCNLTMPYKMQLHSLAVSGL*GHCPLR Trigger: TCTAAGTGGACAATGTCCCAAGAGGCCAGAGACTGC...CAGACTATGTAGTTGCATCTTATAAGGCATAGTTAGGTTGCATCTCACCATGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| 3UTR TCA 72 bp | CAATCACAGCTGCCAGGACTTGTTCTTTTTCTACTCTaGTGCCAATGTCCTAACTTTGCTAACGAGGCAGAA | + |
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Preference number: 3 (lower is better) Translates to: QSQLPGLVLFLL*CQCPNFANEAE Trigger: TTCTGCCTCGTTAGCAAAGTTAGGACATTGGCATCAGAGTAGAAAAAGAACAAGTCCTGGCAGCTGTGATTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| 3UTR CCA 72 bp | ATCCGGGGCTTTGTGCCATTAGAGATGTTTTGGATGTaGCCATCAATGAACTTGTCTTTAGAATTCAGTCTC | + |
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Preference number: 3 (lower is better) Translates to: IRGFVPLEMFWM*PSMNLSLEFSL Trigger: GAGACTGAATTCTAAAGACAAGTTCATTGATGGCCACATCCAAAACATCTCTAATGGCACAAAGCCCCGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| 3UTR-3UTR CAA 90 bp | CTACCTTCCTCGTTGGCAATTAAACAAACTGCGCAACTCTTTCATTTTTCAATACCAGAAGCTCTGCTATaGAATGGCAGGTTTGGCTCT | + |
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Preference number: 3 (lower is better) Translates to: LPSSLAIKQTAQLFHFSIPEALL*NGRFGS Trigger: AGAGCCAAACCTGCCATTCAATAGCAGAGCTTCTGG...TATTGAAAAATGAAAGAGTTGCGCAGTTTGTTTAATTGCCAACGAGGAAGGTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| 3UTR CCA 72 bp | GTTCTTATCCGGGGCTTTGTGCCATTAGAGATGTTTTaGATGTGGCCATCAATGAACTTGTCTTTAGAATTC | + |
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Preference number: 3 (lower is better) Translates to: VLIRGFVPLEMF*MWPSMNLSLEF Trigger: GAATTCTAAAGACAAGTTCATTGATGGCCACATCCAAAACATCTCTAATGGCACAAAGCCCCGGATAAGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| 3UTR-3UTR CAA 90 bp | GTCATGGTGAGATGCAACCTAACTATGCCTTATAAGATGCAACTACATAGTCTGTGGCCATCAATGAACTaGTCTTTAGAATTCAGTCTC | + |
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Preference number: 3 (lower is better) Translates to: VMVRCNLTMPYKMQLHSLWPSMN*SLEFSL Trigger: GAGACTGAATTCTAAAGACAAGTTCATTGATGGCCA...CAGACTATGTAGTTGCATCTTATAAGGCATAGTTAGGTTGCATCTCACCATGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| 3UTR GCA 72 bp | TTCCTGTTTATAAGGAGACAAAATGGCAATCACAGCTaGCAGGACTTGTTCTTTTTCTACTCTGATGCCAAT | + |
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Preference number: 3 (lower is better) Translates to: FLFIRRQNGNHS*QDLFFFYSDAN Trigger: ATTGGCATCAGAGTAGAAAAAGAACAAGTCCTGGCAGCTGTGATTGCCATTTTGTCTCCTTATAAACAGGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| 3UTR GCA 72 bp | TGGAATGACTTTCGTGTTAAACAAAACTACAGAGAATaGAGCAGCTTCAGGACTCTTGTACATTGTTCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: WNDFRVKQNYRE*SSFRTLVHCSC Trigger: ACAAGAACAATGTACAAGAGTCCTGAAGCTGCTGCATTCTCTGTAGTTTTGTTTAACACGAAAGTCATTCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| 3UTR CCA 72 bp | AACTATTTCTTTACAGGACCAATGCTGCCAATTTCATaGGGAAATCAACATGTAAAGTGTCCAAAAGAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: NYFFTGPMLPIS*GNQHVKCPKEA Trigger: AGCTTCTTTTGGACACTTTACATGTTGATTTCCCCATGAAATTGGCAGCATTGGTCCTGTAAAGAAATAGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| 3UTR GCA 72 bp | AAGGCTAGTTATCAAAATAAGACAGTCATGGTGAGATaGAACCTAACTATGCCTTATAAGATGCAACTACAT | + |
|
Preference number: 3 (lower is better) Translates to: KASYQNKTVMVR*NLTMPYKMQLH Trigger: ATGTAGTTGCATCTTATAAGGCATAGTTAGGTTGCATCTCACCATGACTGTCTTATTTTGATAACTAGCCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR CCA 90 bp | CTCTTCAGGCTATCGAGCTGGAAGGAGGGGACACTGATTGCCAGGCAGCCTCCTCCCCGCGAGTTTCATTaGGCCCCGGGAAGACCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LFRLSSWKEGTLIARQPPPREFH*APGRPF Trigger: GAAGGGTCTTCCCGGGGCCCAATGAAACTCGCGGGG...AGGAGGCTGCCTGGCAATCAGTGTCCCCTCCTTCCAGCTCGATAGCCTGAAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR GCA 90 bp | CTTGTACATTGTTCTTGTGTCTCCAACGGTCACCCTGAAGTCAGCCAGGGCCGCATAGCAAGGCCTGACTaGCCAGGGGGTGGGGCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LVHCSCVSNGHPEVSQGRIARPD*PGGGAP Trigger: AGGCGCCCCACCCCCTGGGCAGTCAGGCCTTGCTAT...GCGGCCCTGGCTGACTTCAGGGTGACCGTTGGAGACACAAGAACAATGTACAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR GCA 90 bp | AGCCTCCTCCATGCCTGTCGCTTCTGGAGTGTCTCTCCCATGCTCAGAATACTGGAGCAGGTGGCAGTCTaGCACTCCAGGCACTGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: SLLHACRFWSVSPMLRILEQVAV*HSRHCP Trigger: CGGACAGTGCCTGGAGTGGCAGACTGCCACCTGCTC...CAGTATTCTGAGCATGGGAGAGACACTCCAGAAGCGACAGGCATGGAGGAGGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR GCA 90 bp | GTTCTTGTGTCTCCAACGGTCACCCTGAAGTCAGCCAGGGCCGCTCCAGACTTCCGTTCGTGTTGGCTGTaGAGCTGGCACAGTCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VLVSPTVTLKSARAAPDFRSCWL*SWHSQH Trigger: ATGCTGACTGTGCCAGCTGCACAGCCAACACGAACG...GAAGTCTGGAGCGGCCCTGGCTGACTTCAGGGTGACCGTTGGAGACACAAGAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR GCA 90 bp | AGCCTCCTCCATGCCTGTCGCTTCTGGAGTGTCTCTCCCATGCTCAGAATACTGTGCTGCTGCACCACATaGACTCCATGCCGCTGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SLLHACRFWSVSPMLRILCCCTT*TPCRCS Trigger: CGAGCAGCGGCATGGAGTGCATGTGGTGCAGCAGCA...CAGTATTCTGAGCATGGGAGAGACACTCCAGAAGCGACAGGCATGGAGGAGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR TCA 90 bp | TGTGAAGACTCAGAGGAACCACTCTGGCCCGGCACGGCGACTCGGGGCACCAAAGTCCAAGTTTTTGTTTaGCTGCTCTGGGTTGGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: CEDSEEPLWPGTATRGTKVQVFV*LLWVGD Trigger: ATCGCCAACCCAGAGCAGTCAAACAAAAACTTGGAC...TTTGGTGCCCCGAGTCGCCGTGCCGGGCCAGAGTGGTTCCTCTGAGTCTTCACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR CCA 90 bp | GTTCTTGTGTCTCCAACGGTCACCCTGAAGTCAGCCAGGGCCGCTCCAGACTTCAAGTTGATGGCAGTGTaGTGCCGGTCATCTTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VLVSPTVTLKSARAAPDFKLMAV*CRSSSC Trigger: GCAGGAAGATGACCGGCACCACACTGCCATCAACTT...GAAGTCTGGAGCGGCCCTGGCTGACTTCAGGGTGACCGTTGGAGACACAAGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR TCA 90 bp | GTTCTTGTGTCTCCAACGGTCACCCTGAAGTCAGCCAGGGCCGCTCCAGACTTCCCCATAATTCATCGGTaGCGTTGCCATCACTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VLVSPTVTLKSARAAPDFPIIHR*RCHHWS Trigger: AGACCAGTGATGGCAACGTCACCGATGAATTATGGG...GAAGTCTGGAGCGGCCCTGGCTGACTTCAGGGTGACCGTTGGAGACACAAGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR CCA 90 bp | TGTGAAGACTCAGAGGAACCACTCTGGCCCGGCACGGCGACTCGGGGCACCAAAATCCACCTTGCACAATaGCTCCTTTCGTTTCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: CEDSEEPLWPGTATRGTKIHLAQ*LLSFLE Trigger: TTCCAGAAACGAAAGGAGCCATTGTGCAAGGTGGAT...TTTGGTGCCCCGAGTCGCCGTGCCGGGCCAGAGTGGTTCCTCTGAGTCTTCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR CCA 90 bp | CTCTTCAGGCTATCGAGCTGGAAGGAGGGGACACTGATTGCCAGGCAGCCTCCTTGTTGGCTGTGCAGCTaGCACAGTCAGCATATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LFRLSSWKEGTLIARQPPCWLCS*HSQHIC Trigger: ACAGATATGCTGACTGTGCCAGCTGCACAGCCAACA...AGGAGGCTGCCTGGCAATCAGTGTCCCCTCCTTCCAGCTCGATAGCCTGAAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR CCA 90 bp | AGCCTCCTCCATGCCTGTCGCTTCTGGAGTGTCTCTCCCATGCTCAGAATACTGAAGCAAAGGGACGGCTaGCCATCTGCTGTCGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SLLHACRFWSVSPMLRILKQRDG*PSAVVL Trigger: GAGAACGACAGCAGATGGCCAGCCGTCCCTTTGCTT...CAGTATTCTGAGCATGGGAGAGACACTCCAGAAGCGACAGGCATGGAGGAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR CCA 90 bp | GTTCTTGTGTCTCCAACGGTCACCCTGAAGTCAGCCAGGGCCGCTCCAGACTTCAAGTTCCTTGACGTGTaGAGAGGTGCTTCCGATTGC | + |
|
Preference number: 4 (lower is better) Translates to: VLVSPTVTLKSARAAPDFKFLDV*RGASDC Trigger: GCAATCGGAAGCACCTCTCCACACGTCAAGGAACTT...GAAGTCTGGAGCGGCCCTGGCTGACTTCAGGGTGACCGTTGGAGACACAAGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR TCA 90 bp | CTTGTACATTGTTCTTGTGTCTCCAACGGTCACCCTGAAGTCAGCCAGGGCCGCGCAGTTGCTGCTGGCTaGGATGCATTTCTTGTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: LVHCSCVSNGHPEVSQGRAVAAG*DAFLVV Trigger: GACGACAAGAAATGCATCTCAGCCAGCAGCAACTGC...GCGGCCCTGGCTGACTTCAGGGTGACCGTTGGAGACACAAGAACAATGTACAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR TCA 90 bp | CTTGTACATTGTTCTTGTGTCTCCAACGGTCACCCTGAAGTCAGCCAGGGCCGCACTGTCGCCCAGTGGTaGGATTCTTACACTGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LVHCSCVSNGHPEVSQGRTVAQW*DSYTAH Trigger: GTGAGCAGTGTAAGAATCTCACCACTGGGCGACAGT...GCGGCCCTGGCTGACTTCAGGGTGACCGTTGGAGACACAAGAACAATGTACAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR GCA 90 bp | AGCCTCCTCCATGCCTGTCGCTTCTGGAGTGTCTCTCCCATGCTCAGAATACTGCATAGTACCCTGGCATaGATTCCTGACACTGTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLLHACRFWSVSPMLRILHSTLA*IPDTVA Trigger: GGCGACAGTGTCAGGAATGCATGCCAGGGTACTATG...CAGTATTCTGAGCATGGGAGAGACACTCCAGAAGCGACAGGCATGGAGGAGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR TCA 90 bp | TTCCCTCTCTGTTCTTATCCGGGGCTTTGTGCCATTAGAGATGTTTTGGATGTGCGTAGCCAGACGTCGTaGCCACCTCAGGCACGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FPLCSYPGLCAIRDVLDVRSQTS*PPQARS Trigger: AGACCGTGCCTGAGGTGGTCACGACGTCTGGCTACG...CACATCCAAAACATCTCTAATGGCACAAAGCCCCGGATAAGAACAGAGAGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR TCA 90 bp | CCCCTCCACAGGTCTGGTCTACCTTCCTCGTTGGCAATTAAACAAACTGCGCAACATTCCTGCTGCCGCTaGTCCCACTGGCAATTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: PLHRSGLPSSLAIKQTAQHSCCR*SHWQFK Trigger: CTTGAATTGCCAGTGGGATCAGCGGCAGCAGGAATG...TTGCGCAGTTTGTTTAATTGCCAACGAGGAAGGTAGACCAGACCTGTGGAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR TCA 90 bp | GTGAGATGCAACCTAACTATGCCTTATAAGATGCAACTACATAGTCTGTGGTCAGGCGATAGCAAGGCCTaGCTGCCCAGGGGGTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VRCNLTMPYKMQLHSLWSGDSKA*LPRGWG Trigger: GCCCCACCCCCTGGGCAGTCAGGCCTTGCTATCGCC...TGACCACAGACTATGTAGTTGCATCTTATAAGGCATAGTTAGGTTGCATCTCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR GCA 90 bp | TGTGAAGACTCAGAGGAACCACTCTGGCCCGGCACGGCGACTCGGGGCACCAAAACAAGCTATGTCATATaGCAGGAAATCGGCAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: CEDSEEPLWPGTATRGTKTSYVI*QEIGRK Trigger: TTTTCTGCCGATTTCCTGGCATATGACATAGCTTGT...TTTGGTGCCCCGAGTCGCCGTGCCGGGCCAGAGTGGTTCCTCTGAGTCTTCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR GCA 90 bp | AGCCTCCTCCATGCCTGTCGCTTCTGGAGTGTCTCTCCCATGCTCAGAATACTGTGGCCATATCCACCTTaGACAATGGCTCCTTTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: SLLHACRFWSVSPMLRILWPYPP*TMAPFV Trigger: AACGAAAGGAGCCATTGTGCAAGGTGGATATGGCCA...CAGTATTCTGAGCATGGGAGAGACACTCCAGAAGCGACAGGCATGGAGGAGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR GCA 90 bp | GTTCTTGTGTCTCCAACGGTCACCCTGAAGTCAGCCAGGGCCGCTCCAGACTTCGGCAGAAAAACATTTTaGACCGTTACTCAGGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VLVSPTVTLKSARAAPDFGRKTF*TVTQGS Trigger: ACTTCCCTGAGTAACGGTGCAAAATGTTTTTCTGCC...GAAGTCTGGAGCGGCCCTGGCTGACTTCAGGGTGACCGTTGGAGACACAAGAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR CCA 90 bp | CTTGTACATTGTTCTTGTGTCTCCAACGGTCACCCTGAAGTCAGCCAGGGCCGCTGCTGCAGTTGCTGCTaGCTGAGATGCATTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LVHCSCVSNGHPEVSQGRCCSCC*LRCISC Trigger: ACAAGAAATGCATCTCAGCCAGCAGCAACTGCAGCA...GCGGCCCTGGCTGACTTCAGGGTGACCGTTGGAGACACAAGAACAATGTACAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR TCA 90 bp | AGCCTCCTCCATGCCTGTCGCTTCTGGAGTGTCTCTCCCATGCTCAGAATACTGGTTGTACACTTTCCATaGCCAGAGCAGTTGTTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLLHACRFWSVSPMLRILVVHFP*PEQLLG Trigger: TCCTAACAACTGCTCTGGTCATGGAAAGTGTACAAC...CAGTATTCTGAGCATGGGAGAGACACTCCAGAAGCGACAGGCATGGAGGAGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR TCA 90 bp | GTTCTTGTGTCTCCAACGGTCACCCTGAAGTCAGCCAGGGCCGCTCCAGACTTCATTGATAAGAACAGCTaGGTGAAGGTATCTGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VLVSPTVTLKSARAAPDFIDKNS*VKVSGK Trigger: TTTGCCAGATACCTTCACTCAGCTGTTCTTATCAAT...GAAGTCTGGAGCGGCCCTGGCTGACTTCAGGGTGACCGTTGGAGACACAAGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR TCA 90 bp | CTCTTCAGGCTATCGAGCTGGAAGGAGGGGACACTGATTGCCAGGCAGCCTCCTACACTTTCTGCTGTGTaGACTTCTGTATTTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: LFRLSSWKEGTLIARQPPTLSAV*TSVFHP Trigger: TGGATGAAATACAGAAGTTCACACAGCAGAAAGTGT...AGGAGGCTGCCTGGCAATCAGTGTCCCCTCCTTCCAGCTCGATAGCCTGAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR CCA 90 bp | CTTGTACATTGTTCTTGTGTCTCCAACGGTCACCCTGAAGTCAGCCAGGGCCGCGCATGTCCCCCTAAGTaGATTACCAACATAGCGATT | + |
|
Preference number: 4 (lower is better) Translates to: LVHCSCVSNGHPEVSQGRACPPK*ITNIAI Trigger: AATCGCTATGTTGGTAATCCACTTAGGGGGACATGC...GCGGCCCTGGCTGACTTCAGGGTGACCGTTGGAGACACAAGAACAATGTACAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR TCA 90 bp | CTTGTACATTGTTCTTGTGTCTCCAACGGTCACCCTGAAGTCAGCCAGGGCCGCACTGCACGAGATCCATaGTTGTGTTGTGTTGTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LVHCSCVSNGHPEVSQGRTARDP*LCCVVK Trigger: TTTCACAACACAACACAATCATGGATCTCGTGCAGT...GCGGCCCTGGCTGACTTCAGGGTGACCGTTGGAGACACAAGAACAATGTACAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR GCA 90 bp | GTCATGGTGAGATGCAACCTAACTATGCCTTATAAGATGCAACTACATAGTCTGAACCTGCCCTGGCAGTaGTGGCACTGGTCCCCAACC | + |
|
Preference number: 4 (lower is better) Translates to: VMVRCNLTMPYKMQLHSLNLPWQ*WHWSPT Trigger: GGTTGGGGACCAGTGCCAGCACTGCCAGGGCAGGTT...CAGACTATGTAGTTGCATCTTATAAGGCATAGTTAGGTTGCATCTCACCATGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR GCA 90 bp | GTTCTTGTGTCTCCAACGGTCACCCTGAAGTCAGCCAGGGCCGCTCCAGACTTCTATGGTATTCCTGTATaGTGCTGGTATAGCCATATA | + |
|
Preference number: 4 (lower is better) Translates to: VLVSPTVTLKSARAAPDFYGIPV*CWYSHI Trigger: TATATGGCTATACCAGCAGCATACAGGAATACCATA...GAAGTCTGGAGCGGCCCTGGCTGACTTCAGGGTGACCGTTGGAGACACAAGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR CCA 90 bp | AGCCTCCTCCATGCCTGTCGCTTCTGGAGTGTCTCTCCCATGCTCAGAATACTGGTGTTTGAGGAGATATaGTATTCCTGTATGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLLHACRFWSVSPMLRILVFEEI*YSCMLL Trigger: CAGCAGCATACAGGAATACCATATCTCCTCAAACAC...CAGTATTCTGAGCATGGGAGAGACACTCCAGAAGCGACAGGCATGGAGGAGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR CCA 90 bp | CTCTTCAGGCTATCGAGCTGGAAGGAGGGGACACTGATTGCCAGGCAGCCTCCTATCTCTATGGAGATTTaGTTTAGGCAATGTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LFRLSSWKEGTLIARQPPISMEI*FRQCLP Trigger: TGGAAGACATTGCCTAAACCAAATCTCCATAGAGAT...AGGAGGCTGCCTGGCAATCAGTGTCCCCTCCTTCCAGCTCGATAGCCTGAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR TCA 90 bp | TTCCCTCTCTGTTCTTATCCGGGGCTTTGTGCCATTAGAGATGTTTTGGATGTGCAAGCGTCCCCAACATaGTTCCAGCCTTCTCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: FPLCSYPGLCAIRDVLDVQASPT*FQPSPQ Trigger: TTGTGGAGAAGGCTGGAATCATGTTGGGGACGCTTG...CACATCCAAAACATCTCTAATGGCACAAAGCCCCGGATAAGAACAGAGAGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR CCA 90 bp | GTGAGATGCAACCTAACTATGCCTTATAAGATGCAACTACATAGTCTGTGGTCAGGCACCCGTTCGTGTTaGCTGTGCAGCTGGCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: VRCNLTMPYKMQLHSLWSGTRSC*LCSWHS Trigger: ACTGTGCCAGCTGCACAGCCAACACGAACGGGTGCC...TGACCACAGACTATGTAGTTGCATCTTATAAGGCATAGTTAGGTTGCATCTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR CCA 90 bp | TTCCCTCTCTGTTCTTATCCGGGGCTTTGTGCCATTAGAGATGTTTTGGATGTGCGTAGTTCTTCTCCTTaGGGCAGAGGCTGGTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: FPLCSYPGLCAIRDVLDVRSSSP*GRGWCQ Trigger: TTGACACCAGCCTCTGCCCCAAGGAGAAGAACTACG...CACATCCAAAACATCTCTAATGGCACAAAGCCCCGGATAAGAACAGAGAGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR TCA 90 bp | TATAAGGAGACAAAATGGCAATCACAGCTGCCAGGACTTGTTCTTTTTCTACTCTCCACAGCGTACTGCTaGCTGTGGCCAAGGACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: YKETKWQSQLPGLVLFLLSTAYC*LWPRTV Trigger: CACTGTCCTTGGCCACAGTCAGCAGTACGCTGTGGA...GAGTAGAAAAAGAACAAGTCCTGGCAGCTGTGATTGCCATTTTGTCTCCTTATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR GCA 90 bp | TTCCCTCTCTGTTCTTATCCGGGGCTTTGTGCCATTAGAGATGTTTTGGATGTGTGCTGCTGGCTGAGATaGATTTCTTGTCGTCACACC | + |
|
Preference number: 4 (lower is better) Translates to: FPLCSYPGLCAIRDVLDVCCWLR*ISCRHT Trigger: GGTGTGACGACAAGAAATGCATCTCAGCCAGCAGCA...CACATCCAAAACATCTCTAATGGCACAAAGCCCCGGATAAGAACAGAGAGGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR GCA 90 bp | TCTGTTCTTATCCGGGGCTTTGTGCCATTAGAGATGTTTTGGATGTGGCCATCATGCCGGTCATCTTCCTaGAGCAAGCTGAAGGTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SVLIRGFVPLEMFWMWPSCRSSS*SKLKVN Trigger: GTTTACCTTCAGCTTGCTGCAGGAAGATGACCGGCA...TGATGGCCACATCCAAAACATCTCTAATGGCACAAAGCCCCGGATAAGAACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR GCA 90 bp | GTCATGGTGAGATGCAACCTAACTATGCCTTATAAGATGCAACTACATAGTCTGGGACGGCTGGCCATCTaGTGTCGTTCTCGAAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VMVRCNLTMPYKMQLHSLGRLAI*CRSRSS Trigger: ACTGCTTCGAGAACGACAGCAGATGGCCAGCCGTCC...CAGACTATGTAGTTGCATCTTATAAGGCATAGTTAGGTTGCATCTCACCATGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR CCA 90 bp | CCCCTCCACAGGTCTGGTCTACCTTCCTCGTTGGCAATTAAACAAACTGCGCAATTGCAACAGAGACACTaGTTGTACACTTTCCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: PLHRSGLPSSLAIKQTAQLQQRH*LYTFHD Trigger: GTCATGGAAAGTGTACAACCAGTGTCTCTGTTGCAA...TTGCGCAGTTTGTTTAATTGCCAACGAGGAAGGTAGACCAGACCTGTGGAGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR CCA 90 bp | TTCCCTCTCTGTTCTTATCCGGGGCTTTGTGCCATTAGAGATGTTTTGGATGTGCGAGTCCATCTGCCATaGATGTGCAAGGGTTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FPLCSYPGLCAIRDVLDVRVHLP*MCKGLL Trigger: AAGCAAACCCTTGCACATCCATGGCAGATGGACTCG...CACATCCAAAACATCTCTAATGGCACAAAGCCCCGGATAAGAACAGAGAGGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR TCA 90 bp | GTCATGGTGAGATGCAACCTAACTATGCCTTATAAGATGCAACTACATAGTCTGTACTGTCCAGCTCCATaGTGTGTGCCGAGTGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: VMVRCNLTMPYKMQLHSLYCPAP*CVPSVP Trigger: AGGGACACTCGGCACACATCATGGAGCTGGACAGTA...CAGACTATGTAGTTGCATCTTATAAGGCATAGTTAGGTTGCATCTCACCATGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR TCA 90 bp | CCCCTCCACAGGTCTGGTCTACCTTCCTCGTTGGCAATTAAACAAACTGCGCAAGCAATTCAAGTTGAGTaGACAGCTTTTACAGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PLHRSGLPSSLAIKQTAQAIQVE*TAFTAC Trigger: ACAAGCTGTAAAAGCTGTTCACTCAACTTGAATTGC...TTGCGCAGTTTGTTTAATTGCCAACGAGGAAGGTAGACCAGACCTGTGGAGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR TCA 90 bp | TCTTATCCGGGGCTTTGTGCCATTAGAGATGTTTTGGATGTGGCCATCAATGAACCCAGCAAGTTTGTTTaGTCTTCCAGACCACAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SYPGLCAIRDVLDVAINEPSKFV*SSRPQQ Trigger: CTGCTGTGGTCTGGAAGATCAAACAAACTTGCTGGG...TTCATTGATGGCCACATCCAAAACATCTCTAATGGCACAAAGCCCCGGATAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR GCA 90 bp | CCCCTCCACAGGTCTGGTCTACCTTCCTCGTTGGCAATTAAACAAACTGCGCAAACAATACACTTGACTTaGAACAGAGACACTGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PLHRSGLPSSLAIKQTAQTIHLT*NRDTGC Trigger: ACAACCAGTGTCTCTGTTGCAAGTCAAGTGTATTGT...TTGCGCAGTTTGTTTAATTGCCAACGAGGAAGGTAGACCAGACCTGTGGAGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR CCA 90 bp | TTCTTTTTCTACTCTGATGCCAATGTCCTAACTTTGCTAACGAGGCAGAAAACTTCCTCTCGCAGGGCTTaGACTGGGACACCTGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: FFFYSDANVLTLLTRQKTSSRRA*TGTPEH Trigger: ATGCTCAGGTGTCCCAGTCCAAGCCCTGCGAGAGGA...AGTTTTCTGCCTCGTTAGCAAAGTTAGGACATTGGCATCAGAGTAGAAAAAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR CCA 90 bp | GTGAGATGCAACCTAACTATGCCTTATAAGATGCAACTACATAGTCTGTGGTCATGTGGCCAAGGACAGTaGGGGTTTTCGTGCTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: VRCNLTMPYKMQLHSLWSCGQGQ*GFSCSM Trigger: CATGGAGCACGAAAACCCCCACTGTCCTTGGCCACA...TGACCACAGACTATGTAGTTGCATCTTATAAGGCATAGTTAGGTTGCATCTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR TCA 90 bp | GGAATGACTTTCGTGTTAAACAAAACTACAGAGAATGCAGCAGCTTCAGGACTCAAGGTTCTGTTAACTTaGACCTGCCCTGGCAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GMTFVLNKTTENAAASGLKVLLT*TCPGSA Trigger: AGCACTGCCAGGGCAGGTTCAAGTTAACAGAACCTT...GAGTCCTGAAGCTGCTGCATTCTCTGTAGTTTTGTTTAACACGAAAGTCATTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR TCA 90 bp | TTCTTTTTCTACTCTGATGCCAATGTCCTAACTTTGCTAACGAGGCAGAAAACTGGCACTGGTCACCCTTaGTCCCCTTGGTTGTGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: FFFYSDANVLTLLTRQKTGTGHP*SPWLCK Trigger: TTTGCACAACCAAGGGGATCAAGGGTGACCAGTGCC...AGTTTTCTGCCTCGTTAGCAAAGTTAGGACATTGGCATCAGAGTAGAAAAAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR GCA 90 bp | TTCCCTCTCTGTTCTTATCCGGGGCTTTGTGCCATTAGAGATGTTTTGGATGTGCTTGCCAACTATCGTTaGAGACACAGAGTTTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FPLCSYPGLCAIRDVLDVLANYR*RHRVSL Trigger: GAGAGAAACTCTGTGTCTGCAACGATAGTTGGCAAG...CACATCCAAAACATCTCTAATGGCACAAAGCCCCGGATAAGAACAGAGAGGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR GCA 90 bp | TTCCCTCTCTGTTCTTATCCGGGGCTTTGTGCCATTAGAGATGTTTTGGATGTGCATCTGCCATGGATGTaGAAGGGTTTGCTTTTAACC | + |
|
Preference number: 4 (lower is better) Translates to: FPLCSYPGLCAIRDVLDVHLPWM*KGLLLT Trigger: GGTTAAAAGCAAACCCTTGCACATCCATGGCAGATG...CACATCCAAAACATCTCTAATGGCACAAAGCCCCGGATAAGAACAGAGAGGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR GCA 90 bp | GGAATGACTTTCGTGTTAAACAAAACTACAGAGAATGCAGCAGCTTCAGGACTCAGAGGTGCTTCCGATTaGGGACTCCAGAAGTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GMTFVLNKTTENAAASGLRGASD*GLQKSC Trigger: ACAAGACTTCTGGAGTCCGCAATCGGAAGCACCTCT...GAGTCCTGAAGCTGCTGCATTCTCTGTAGTTTTGTTTAACACGAAAGTCATTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR CCA 90 bp | TCTGTTCTTATCCGGGGCTTTGTGCCATTAGAGATGTTTTGGATGTGGCCATCATCATACACACTTGTGTaGCCATATCCACCTTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: SVLIRGFVPLEMFWMWPSSYTLV*PYPPCT Trigger: TGTGCAAGGTGGATATGGCCACACAAGTGTGTATGA...TGATGGCCACATCCAAAACATCTCTAATGGCACAAAGCCCCGGATAAGAACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR CCA 90 bp | TTCCCTCTCTGTTCTTATCCGGGGCTTTGTGCCATTAGAGATGTTTTGGATGTGAACACATTTTATCCCTaGACCAGCGTTTCTGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: FPLCSYPGLCAIRDVLDVNTFYP*TSVSAQ Trigger: CTGTGCAGAAACGCTGGTCCAGGGATAAAATGTGTT...CACATCCAAAACATCTCTAATGGCACAAAGCCCCGGATAAGAACAGAGAGGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| 3UTR CAA 72 bp | AACAAAACTACAGAGAATGCAGCAGCTTCAGGACTCTaGTACATTGTTCTTGTGTCTCCAACGGTCACCCTG | + |
|
Preference number: 4 (lower is better) Translates to: NKTTENAAASGL*YIVLVSPTVTL Trigger: CAGGGTGACCGTTGGAGACACAAGAACAATGTACAAGAGTCCTGAAGCTGCTGCATTCTCTGTAGTTTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR TCA 90 bp | TTCCCTCTCTGTTCTTATCCGGGGCTTTGTGCCATTAGAGATGTTTTGGATGTGCTCCAATCACCCACATaGATTTCCCATGTAAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: FPLCSYPGLCAIRDVLDVLQSPT*ISHVKL Trigger: CAGTTTTACATGGGAAATTCATGTGGGTGATTGGAG...CACATCCAAAACATCTCTAATGGCACAAAGCCCCGGATAAGAACAGAGAGGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR TCA 90 bp | TCTGTTCTTATCCGGGGCTTTGTGCCATTAGAGATGTTTTGGATGTGGCCATCAACTGGCAATTCAAGTTaGGTGAACAGCTTTTACAGC | + |
|
Preference number: 4 (lower is better) Translates to: SVLIRGFVPLEMFWMWPSTGNSS*VNSFYS Trigger: GCTGTAAAAGCTGTTCACTCAACTTGAATTGCCAGT...TGATGGCCACATCCAAAACATCTCTAATGGCACAAAGCCCCGGATAAGAACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR TCA 90 bp | AGGACCAATGCTGCCAATTTCATGGGGAAATCAACATGTAAAGTGTCCAAAAGAAGAAGGCTTCTGCTGTaGGATGTCTATCAGGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: RTNAANFMGKSTCKVSKRRRLLL*DVYQGT Trigger: AGTGCCCTGATAGACATCTCACAGCAGAAGCCTTCT...TCTTTTGGACACTTTACATGTTGATTTCCCCATGAAATTGGCAGCATTGGTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR GCA 90 bp | AGGACCAATGCTGCCAATTTCATGGGGAAATCAACATGTAAAGTGTCCAAAAGACTGGACCAGCGTTTCTaGACAGTTCTTCATCTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: RTNAANFMGKSTCKVSKRLDQRF*TVLHLG Trigger: TCCGAGATGAAGAACTGTGCAGAAACGCTGGTCCAG...TCTTTTGGACACTTTACATGTTGATTTCCCCATGAAATTGGCAGCATTGGTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR GCA 90 bp | ATTAGAGATGTTTTGGATGTGGCCATCAATGAACTTGTCTTTAGAATTCAGTCTAGCGCTTCGTGCTGCTaGACCACATGCACTCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: IRDVLDVAINELVFRIQSSASCC*TTCTPC Trigger: GCATGGAGTGCATGTGGTGCAGCAGCACGAAGCGCT...AGACTGAATTCTAAAGACAAGTTCATTGATGGCCACATCCAAAACATCTCTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR GCA 90 bp | TCTGTTCTTATCCGGGGCTTTGTGCCATTAGAGATGTTTTGGATGTGGCCATCAAAGGTGACAAAGAACTaGACGAGATCCATGATTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SVLIRGFVPLEMFWMWPSKVTKN*TRSMIV Trigger: CACAATCATGGATCTCGTGCAGTTCTTTGTCACCTT...TGATGGCCACATCCAAAACATCTCTAATGGCACAAAGCCCCGGATAAGAACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR CCA 90 bp | GTCATGGTGAGATGCAACCTAACTATGCCTTATAAGATGCAACTACATAGTCTGTCCACAAAGGTGAGCTaGCAAAGCCTGACATTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VMVRCNLTMPYKMQLHSLSTKVS*QSLTFL Trigger: CAGGAATGTCAGGCTTTGCCAGCTCACCTTTGTGGA...CAGACTATGTAGTTGCATCTTATAAGGCATAGTTAGGTTGCATCTCACCATGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR CCA 90 bp | ATTAGAGATGTTTTGGATGTGGCCATCAATGAACTTGTCTTTAGAATTCAGTCTCCACCTCCTTGGACGTaGTCAGGGAGGCGAGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: IRDVLDVAINELVFRIQSPPPWT*SGRRDF Trigger: GAAATCTCGCCTCCCTGACCACGTCCAAGGAGGTGG...AGACTGAATTCTAAAGACAAGTTCATTGATGGCCACATCCAAAACATCTCTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR CCA 90 bp | GTCATGGTGAGATGCAACCTAACTATGCCTTATAAGATGCAACTACATAGTCTGTCAGAGTCACATAGCTaGCACTGGTCACCCTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: VMVRCNLTMPYKMQLHSLSESHS*HWSPLI Trigger: GATCAAGGGTGACCAGTGCCAGCTATGTGACTCTGA...CAGACTATGTAGTTGCATCTTATAAGGCATAGTTAGGTTGCATCTCACCATGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR TCA 90 bp | TCTTATCCGGGGCTTTGTGCCATTAGAGATGTTTTGGATGTGGCCATCAATGAACATTCACAATACACTTaGCTTGCAACAGAGACACTG | + |
|
Preference number: 4 (lower is better) Translates to: SYPGLCAIRDVLDVAINEHSQYT*LATETL Trigger: CAGTGTCTCTGTTGCAAGTCAAGTGTATTGTGAATG...TTCATTGATGGCCACATCCAAAACATCTCTAATGGCACAAAGCCCCGGATAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR GCA 90 bp | TCTGTTCTTATCCGGGGCTTTGTGCCATTAGAGATGTTTTGGATGTGGCCATCAGGTATTCCTGTATGCTaGTGGTATAGCCATATATTG | + |
|
Preference number: 4 (lower is better) Translates to: SVLIRGFVPLEMFWMWPSGIPVC*WYSHIL Trigger: CAATATATGGCTATACCAGCAGCATACAGGAATACC...TGATGGCCACATCCAAAACATCTCTAATGGCACAAAGCCCCGGATAAGAACAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR GCA 90 bp | TTCCCTCTCTGTTCTTATCCGGGGCTTTGTGCCATTAGAGATGTTTTGGATGTGCATCTCGGAAAGCTTTaGAATTTGGGGGTTTATACA | + |
|
Preference number: 4 (lower is better) Translates to: FPLCSYPGLCAIRDVLDVHLGKL*NLGVYT Trigger: TGTATAAACCCCCAAATTGCAAAGCTTTCCGAGATG...CACATCCAAAACATCTCTAATGGCACAAAGCCCCGGATAAGAACAGAGAGGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR CCA 90 bp | TTCCCTCTCTGTTCTTATCCGGGGCTTTGTGCCATTAGAGATGTTTTGGATGTGCGGTTGACATCTCTATaGAGATTTGGTTTAGGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: FPLCSYPGLCAIRDVLDVRLTSL*RFGLGN Trigger: ATTGCCTAAACCAAATCTCCATAGAGATGTCAACCG...CACATCCAAAACATCTCTAATGGCACAAAGCCCCGGATAAGAACAGAGAGGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR CCA 90 bp | TATAAGGAGACAAAATGGCAATCACAGCTGCCAGGACTTGTTCTTTTTCTACTCCTGTGTCCATTACACTaGCAAGCTGGACACTGGATA | + |
|
Preference number: 4 (lower is better) Translates to: YKETKWQSQLPGLVLFLLLCPLH*QAGHWI Trigger: TATCCAGTGTCCAGCTTGCCAGTGTAATGGACACAG...GAGTAGAAAAAGAACAAGTCCTGGCAGCTGTGATTGCCATTTTGTCTCCTTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR CCA 90 bp | TATAAGGAGACAAAATGGCAATCACAGCTGCCAGGACTTGTTCTTTTTCTACTCTCTCTTCCCCAGATATaGTTCCACCTGTTGAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: YKETKWQSQLPGLVLFLLSLPQI*FHLLSQ Trigger: TTGGCTCAACAGGTGGAACCATATCTGGGGAAGAGA...GAGTAGAAAAAGAACAAGTCCTGGCAGCTGTGATTGCCATTTTGTCTCCTTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR TCA 90 bp | TCTTATCCGGGGCTTTGTGCCATTAGAGATGTTTTGGATGTGGCCATCAATGAAACCAAATATATACATTaGCCCATTGATGACGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: SYPGLCAIRDVLDVAINETKYIH*PIDDDC Trigger: GCAGTCGTCATCAATGGGTCAATGTATATATTTGGT...TTCATTGATGGCCACATCCAAAACATCTCTAATGGCACAAAGCCCCGGATAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR GCA 90 bp | TTCTTTTTCTACTCTGATGCCAATGTCCTAACTTTGCTAACGAGGCAGAAAACTCTTATTGCCAGGCAATaGTTTGTAGCCTCCGTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: FFFYSDANVLTLLTRQKTLIARQ*FVASVN Trigger: GTTCACGGAGGCTACAAAGCATTGCCTGGCAATAAG...AGTTTTCTGCCTCGTTAGCAAAGTTAGGACATTGGCATCAGAGTAGAAAAAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR CCA 90 bp | GGAATGACTTTCGTGTTAAACAAAACTACAGAGAATGCAGCAGCTTCAGGACTCATTACACTGGCAAGCTaGACACTGGATAAAAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: GMTFVLNKTTENAAASGLITLAS*TLDKRP Trigger: TGGTCTTTTATCCAGTGTCCAGCTTGCCAGTGTAAT...GAGTCCTGAAGCTGCTGCATTCTCTGTAGTTTTGTTTAACACGAAAGTCATTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| 3UTR CAA 72 bp | CCATTAGAGATGTTTTGGATGTGGCCATCAATGAACTaGTCTTTAGAATTCAGTCTCCTCACAGCACCATGT | + |
|
Preference number: 4 (lower is better) Translates to: PLEMFWMWPSMN*SLEFSLLTAPC Trigger: ACATGGTGCTGTGAGGAGACTGAATTCTAAAGACAAGTTCATTGATGGCCACATCCAAAACATCTCTAATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR TCA 90 bp | ATTAGAGATGTTTTGGATGTGGCCATCAATGAACTTGTCTTTAGAATTCAGTCTGAATGTCCGTATCTCTaGAGAGGGCCCCTTGATACA | + |
|
Preference number: 4 (lower is better) Translates to: IRDVLDVAINELVFRIQSECPYL*RGPLDT Trigger: TGTATCAAGGGGCCCTCTTCAGAGATACGGACATTC...AGACTGAATTCTAAAGACAAGTTCATTGATGGCCACATCCAAAACATCTCTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR TCA 90 bp | ATTAGAGATGTTTTGGATGTGGCCATCAATGAACTTGTCTTTAGAATTCAGTCTGCAGGCTTGTATTTGTaGAAGGAGACATGTCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: IRDVLDVAINELVFRIQSAGLYL*KETCPP Trigger: GGGAGGACATGTCTCCTTTCACAAATACAAGCCTGC...AGACTGAATTCTAAAGACAAGTTCATTGATGGCCACATCCAAAACATCTCTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR CCA 90 bp | TATAAGGAGACAAAATGGCAATCACAGCTGCCAGGACTTGTTCTTTTTCTACTCCTGGACTCCCACAATTaGCTTTACAGTAAGGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: YKETKWQSQLPGLVLFLLLDSHN*LYSKEC Trigger: ACATTCCTTACTGTAAAGCCAATTGTGGGAGTCCAG...GAGTAGAAAAAGAACAAGTCCTGGCAGCTGTGATTGCCATTTTGTCTCCTTATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR CCA 90 bp | TTCTTTTTCTACTCTGATGCCAATGTCCTAACTTTGCTAACGAGGCAGAAAACTACAGTAGCCATGATCTaGACTCCCACAATTGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FFFYSDANVLTLLTRQKTTVAMI*TPTIGF Trigger: AAAGCCAATTGTGGGAGTCCAGATCATGGCTACTGT...AGTTTTCTGCCTCGTTAGCAAAGTTAGGACATTGGCATCAGAGTAGAAAAAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR CCA 90 bp | GTGAGATGCAACCTAACTATGCCTTATAAGATGCAACTACATAGTCTGTGGTCACTGAGTGAAGGTATCTaGCAAACCCACTTTCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VRCNLTMPYKMQLHSLWSLSEGI*QTHFLS Trigger: TGAAAGAAAGTGGGTTTGCCAGATACCTTCACTCAG...TGACCACAGACTATGTAGTTGCATCTTATAAGGCATAGTTAGGTTGCATCTCAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR CCA 90 bp | GTCATGGTGAGATGCAACCTAACTATGCCTTATAAGATGCAACTACATAGTCTGATTCCTGTATGCTGCTaGTATAGCCATATATTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VMVRCNLTMPYKMQLHSLIPVCC*YSHILQ Trigger: CTGCAATATATGGCTATACCAGCAGCATACAGGAAT...CAGACTATGTAGTTGCATCTTATAAGGCATAGTTAGGTTGCATCTCACCATGAC 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| 3UTR CAA 72 bp | TGTTCTTATCCGGGGCTTTGTGCCATTAGAGATGTTTaGGATGTGGCCATCAATGAACTTGTCTTTAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: CSYPGLCAIRDV*DVAINELVFRI Trigger: AATTCTAAAGACAAGTTCATTGATGGCCACATCCAAAACATCTCTAATGGCACAAAGCCCCGGATAAGAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR TCA 90 bp | ATTAGAGATGTTTTGGATGTGGCCATCAATGAACTTGTCTTTAGAATTCAGTCTATAAGAACAGCTGAGTaGAGGTATCTGGCAAACCCA | + |
|
Preference number: 4 (lower is better) Translates to: IRDVLDVAINELVFRIQSIRTAE*RYLANP Trigger: TGGGTTTGCCAGATACCTTCACTCAGCTGTTCTTAT...AGACTGAATTCTAAAGACAAGTTCATTGATGGCCACATCCAAAACATCTCTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR TCA 90 bp | TATAAGGAGACAAAATGGCAATCACAGCTGCCAGGACTTGTTCTTTTTCTACTCTCCCAAGATTCACAGTaGTTCTTATTCCAAACACAT | + |
|
Preference number: 4 (lower is better) Translates to: YKETKWQSQLPGLVLFLLSQDSQ*FLFQTH Trigger: ATGTGTTTGGAATAAGAATCACTGTGAATCTTGGGA...GAGTAGAAAAAGAACAAGTCCTGGCAGCTGTGATTGCCATTTTGTCTCCTTATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR CCA 90 bp | GTCATGGTGAGATGCAACCTAACTATGCCTTATAAGATGCAACTACATAGTCTGGAAGGGTTTAACATTTaGCAAAATCCAGTAAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: VMVRCNLTMPYKMQLHSLEGFNI*QNPVRL Trigger: GAGTCTTACTGGATTTTGCCAAATGTTAAACCCTTC...CAGACTATGTAGTTGCATCTTATAAGGCATAGTTAGGTTGCATCTCACCATGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| 3UTR CAA 72 bp | TTGTTCTTTTTCTACTCTGATGCCAATGTCCTAACTTaGCTAACGAGGCAGAAAACTGTACATTTCTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: LFFFYSDANVLT*LTRQKTVHFSS Trigger: TGATGAGAAATGTACAGTTTTCTGCCTCGTTAGCAAAGTTAGGACATTGGCATCAGAGTAGAAAAAGAACAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS CCA 90 bp | CGCATGGCCGCCGCACGTGCAAGCTGTGCACTGCCCACCGTTGGTTaGGTCTCCATAGTACCCTGGCATGCATTCCTGACACTGTCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: RMAAARASCALPTVG*VSIVPWHAFLTLSP Trigger: GGGCGACAGTGTCAGGAATGCATGCCAGGGTACTATGGAGACCCAACCAACGGTGGGCAGTGCACAGCTTGCACGTGCGGCGGCCATGCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS CCA 90 bp | CGTTCGCATGGCCGCCGCACGTGCAAGCTGTGCACTGCCCACCGTTaGTTGGGTCTCCATAGTACCCTGGCATGCATTCCTGACACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: RSHGRRTCKLCTAHR*LGLHSTLACIPDTV Trigger: GACAGTGTCAGGAATGCATGCCAGGGTACTATGGAGACCCAACCAACGGTGGGCAGTGCACAGCTTGCACGTGCGGCGGCCATGCGAACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS TCA 90 bp | AGGTGGCAGTCTGCCACTCCAGGCACTGTCCGTAGGGAAAGGAGATaGTGTAAGCGTTGGAGTCCACGCAGCGCTTCGTGCTGCTGCACC | + |
|
Preference number: 5 (lower is better) Translates to: RWQSATPGTVRRERR*CKRWSPRSASCCCT Trigger: GGTGCAGCAGCACGAAGCGCTGCGTGGACTCCAACGCTTACATCATCTCCTTTCCCTACGGACAGTGCCTGGAGTGGCAGACTGCCACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR CAA 90 bp | GTTCTTGTGTCTCCAACGGTCACCCTGAAGTCAGCCAGGGCCGCTCCAGACTTCCACAGGCAGGTGGAGTaGACACAGCGACCGGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VLVSPTVTLKSARAAPDFHRQVE*TQRPEK Trigger: CTTCTCCGGTCGCTGTGTCAACTCCACCTGCCTGTG...GAAGTCTGGAGCGGCCCTGGCTGACTTCAGGGTGACCGTTGGAGACACAAGAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR CAA 90 bp | CTCTTCAGGCTATCGAGCTGGAAGGAGGGGACACTGATTGCCAGGCAGCCTCCTGGGTTGGCGATGAAGTaGATGGCAGTGTGGTGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: LFRLSSWKEGTLIARQPPGLAMK*MAVWCR Trigger: CCGGCACCACACTGCCATCAACTTCATCGCCAACCC...AGGAGGCTGCCTGGCAATCAGTGTCCCCTCCTTCCAGCTCGATAGCCTGAAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS TCA 90 bp | CAGGAGGTCCTCAGGGAGCACGGCTTCTTGCACGGCCTCGCGTTCTaGTTTGGGCTTACTACAGGCTTTTCACAAACGAGTCCATCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: QEVLREHGFLHGLAF*FGLTTGFSQTSPSA Trigger: GGCAGATGGACTCGTTTGTGAAAAGCCTGTAGTAAGCCCAAATCAGAACGCGAGGCCGTGCAAGAAGCCGTGCTCCCTGAGGACCTCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS CCA 90 bp | GGTGTCAAGAACCACGTCACTGTTGTGGACCCCCGCGAGTTTCATTaGGCCCCGGGAAGACCCTTCGATGCAATAGCCTCTTCCTGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: GVKNHVTVVDPREFH*APGRPFDAIASSCV Trigger: AACACAGGAAGAGGCTATTGCATCGAAGGGTCTTCCCGGGGCCCAATGAAACTCGCGGGGGTCCACAACAGTGACGTGGTTCTTGACACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS-3UTR CAA 90 bp | CTCTTCAGGCTATCGAGCTGGAAGGAGGGGACACTGATTGCCAGGCAGCCTCCTTCTGAAGAGGGCCCCTaGATACAGCACCTACATTCC | + |
|
Preference number: 5 (lower is better) Translates to: LFRLSSWKEGTLIARQPPSEEGP*IQHLHS Trigger: GGAATGTAGGTGCTGTATCAAGGGGCCCTCTTCAGA...AGGAGGCTGCCTGGCAATCAGTGTCCCCTCCTTCCAGCTCGATAGCCTGAAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS-3UTR CAA 90 bp | AGCCTCCTCCATGCCTGTCGCTTCTGGAGTGTCTCTCCCATGCTCAGAATACTGGTGTTACTAGGATCGTaGCACCAGCCACACCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SLLHACRFWSVSPMLRILVLLGS*HQPHPG Trigger: GCCTGGGTGTGGCTGGTGCAACGATCCTAGTAACAC...CAGTATTCTGAGCATGGGAGAGACACTCCAGAAGCGACAGGCATGGAGGAGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS CCA 90 bp | GGTCCTCAGGGAGCACGGCTTCTTGCACGGCCTCGCGTTCTGATTTaGGCTTACTACAGGCTTTTCACAAACGAGTCCATCTGCCATGGA | + |
|
Preference number: 5 (lower is better) Translates to: GPQGARLLARPRVLI*AYYRLFTNESICHG Trigger: TCCATGGCAGATGGACTCGTTTGTGAAAAGCCTGTAGTAAGCCCAAATCAGAACGCGAGGCCGTGCAAGAAGCCGTGCTCCCTGAGGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS CCA 90 bp | GCAAGCTGTGCACTGCCCACCGTTGGTTGGGTCTCCATAGTACCCTaGCATGCATTCCTGACACTGTCGCCCAGTGGTGAGATTCTTACA | + |
|
Preference number: 5 (lower is better) Translates to: ASCALPTVGWVSIVP*HAFLTLSPSGEILT Trigger: TGTAAGAATCTCACCACTGGGCGACAGTGTCAGGAATGCATGCCAGGGTACTATGGAGACCCAACCAACGGTGGGCAGTGCACAGCTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS GCA 90 bp | TATGACAATCATGACCACGTCTCTACTGTCCAGCTCCATGATGTGTaGCGAGTGTCCCTCCACAGCGTACTGCTGACTGTGGCCAAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: YDNHDHVSTVQLHDV*RVSLHSVLLTVAKD Trigger: GTCCTTGGCCACAGTCAGCAGTACGCTGTGGAGGGACACTCGGCACACATCATGGAGCTGGACAGTAGAGACGTGGTCATGATTGTCATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR CAA 90 bp | CTCTTCAGGCTATCGAGCTGGAAGGAGGGGACACTGATTGCCAGGCAGCCTCCTCGGCAGAAAAACATTTaGCACCGTTACTCAGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LFRLSSWKEGTLIARQPPRQKNI*HRYSGK Trigger: CTTCCCTGAGTAACGGTGCAAAATGTTTTTCTGCCG...AGGAGGCTGCCTGGCAATCAGTGTCCCCTCCTTCCAGCTCGATAGCCTGAAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR CAA 90 bp | TGTGAAGACTCAGAGGAACCACTCTGGCCCGGCACGGCGACTCGGGGCACCAAAGAATGCCCAAATCGGTaGACATCTCTATGGAGATTT | + |
|
Preference number: 5 (lower is better) Translates to: CEDSEEPLWPGTATRGTKECPNR*TSLWRF Trigger: AAATCTCCATAGAGATGTCAACCGATTTGGGCATTC...TTTGGTGCCCCGAGTCGCCGTGCCGGGCCAGAGTGGTTCCTCTGAGTCTTCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS-3UTR CAA 90 bp | CTTGTACATTGTTCTTGTGTCTCCAACGGTCACCCTGAAGTCAGCCAGGGCCGCTGGATGTGCAAGGGTTaGCTTTTAACCCTGCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: LVHCSCVSNGHPEVSQGRWMCKG*LLTLPL Trigger: CAGTGGCAGGGTTAAAAGCAAACCCTTGCACATCCA...GCGGCCCTGGCTGACTTCAGGGTGACCGTTGGAGACACAAGAACAATGTACAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR CAA 90 bp | CTCTTCAGGCTATCGAGCTGGAAGGAGGGGACACTGATTGCCAGGCAGCCTCCTCACTGGCAATTCAAGTaGAGTGAACAGCTTTTACAG | + |
|
Preference number: 5 (lower is better) Translates to: LFRLSSWKEGTLIARQPPHWQFK*SEQLLQ Trigger: CTGTAAAAGCTGTTCACTCAACTTGAATTGCCAGTG...AGGAGGCTGCCTGGCAATCAGTGTCCCCTCCTTCCAGCTCGATAGCCTGAAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR CAA 90 bp | GGAATGACTTTCGTGTTAAACAAAACTACAGAGAATGCAGCAGCTTCAGGACTCTGGCACCCGTTCGTGTaGGCTGTGCAGCTGGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: GMTFVLNKTTENAAASGLWHPFV*AVQLAQ Trigger: CTGTGCCAGCTGCACAGCCAACACGAACGGGTGCCA...GAGTCCTGAAGCTGCTGCATTCTCTGTAGTTTTGTTTAACACGAAAGTCATTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS TCA 90 bp | ACATTTAGTGTAGTTTCTGACAGACGTGCTGCAGTTGCTGCTGGCTaGGATGCATTTCTTGTCGTCACACCACTGGCACCCGTTCGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: TFSVVSDRRAAVAAG*DAFLVVTPLAPVRV Trigger: AACACGAACGGGTGCCAGTGGTGTGACGACAAGAAATGCATCTCAGCCAGCAGCAACTGCAGCACGTCTGTCAGAAACTACACTAAATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS GCA 90 bp | CGATTGCGGACTCCAGAAGTCTTGTCTTTATTATCAGAAGGCTTCTaGTGTGAGATGTCTATCAGGGCACTGGCGATAGCAAGGCCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: RLRTPEVLSLLSEGF*CEMSIRALAIARPD Trigger: GTCAGGCCTTGCTATCGCCAGTGCCCTGATAGACATCTCACAGCAGAAGCCTTCTGATAATAAAGACAAGACTTCTGGAGTCCGCAATCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS-3UTR CAA 90 bp | CCCCTCCACAGGTCTGGTCTACCTTCCTCGTTGGCAATTAAACAAACTGCGCAACAACAGAGACACTGGTaGTACACTTTCCATGACCAG | + |
|
Preference number: 5 (lower is better) Translates to: PLHRSGLPSSLAIKQTAQQQRHW*YTFHDQ Trigger: CTGGTCATGGAAAGTGTACAACCAGTGTCTCTGTTG...TTGCGCAGTTTGTTTAATTGCCAACGAGGAAGGTAGACCAGACCTGTGGAGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS GCA 90 bp | GGCTTACTACAGGCTTTTCACAAACGAGTCCATCTGCCATGGATGTaGAAGGGTTTGCTTTTAACCCTGCCACTGCAGCCCTTTCTAAGT | + |
|
Preference number: 5 (lower is better) Translates to: GLLQAFHKRVHLPWM*KGLLLTLPLQPFLS Trigger: ACTTAGAAAGGGCTGCAGTGGCAGGGTTAAAAGCAAACCCTTGCACATCCATGGCAGATGGACTCGTTTGTGAAAAGCCTGTAGTAAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS CCA 90 bp | GATTTGGGCTTACTACAGGCTTTTCACAAACGAGTCCATCTGCCATaGATGTGCAAGGGTTTGCTTTTAACCCTGCCACTGCAGCCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: DLGLLQAFHKRVHLP*MCKGLLLTLPLQPF Trigger: AAAGGGCTGCAGTGGCAGGGTTAAAAGCAAACCCTTGCACATCCATGGCAGATGGACTCGTTTGTGAAAAGCCTGTAGTAAGCCCAAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR CAA 90 bp | CCCCTCCACAGGTCTGGTCTACCTTCCTCGTTGGCAATTAAACAAACTGCGCAACACAATACACTTGACTaGCAACAGAGACACTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PLHRSGLPSSLAIKQTAQHNTLD*QQRHWL Trigger: CAACCAGTGTCTCTGTTGCAAGTCAAGTGTATTGTG...TTGCGCAGTTTGTTTAATTGCCAACGAGGAAGGTAGACCAGACCTGTGGAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS GCA 90 bp | GACTTGGTCACTTCGTCATACACACTTGTGTGGCCATATCCACCTTaGACAATGGCTCCTTTCGTTTCTGGAACTAGCCAAGTGTTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: DLVTSSYTLVWPYPP*TMAPFVSGTSQVFE Trigger: CTCAAACACTTGGCTAGTTCCAGAAACGAAAGGAGCCATTGTGCAAGGTGGATATGGCCACACAAGTGTGTATGACGAAGTGACCAAGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS CCA 90 bp | TATTGCCAGGCAATGCTTTGTAGCCTCCGTGAACATAGATGGACTTaGTCACTTCGTCATACACACTTGTGTGGCCATATCCACCTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: YCQAMLCSLREHRWT*SLRHTHLCGHIHLA Trigger: TGCAAGGTGGATATGGCCACACAAGTGTGTATGACGAAGTGACCAAGTCCATCTATGTTCACGGAGGCTACAAAGCATTGCCTGGCAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS CCA 90 bp | CGTACTTATTGCCAGGCAATGCTTTGTAGCCTCCGTGAACATAGATaGACTTGGTCACTTCGTCATACACACTTGTGTGGCCATATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: RTYCQAMLCSLREHR*TWSLRHTHLCGHIH Trigger: GTGGATATGGCCACACAAGTGTGTATGACGAAGTGACCAAGTCCATCTATGTTCACGGAGGCTACAAAGCATTGCCTGGCAATAAGTACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR CAA 90 bp | CCCCTCCACAGGTCTGGTCTACCTTCCTCGTTGGCAATTAAACAAACTGCGCAAGCATTCACAATACACTaGACTTGCAACAGAGACACT | + |
|
Preference number: 5 (lower is better) Translates to: PLHRSGLPSSLAIKQTAQAFTIH*TCNRDT Trigger: AGTGTCTCTGTTGCAAGTCAAGTGTATTGTGAATGC...TTGCGCAGTTTGTTTAATTGCCAACGAGGAAGGTAGACCAGACCTGTGGAGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS-3UTR CAA 90 bp | CCCCTCCACAGGTCTGGTCTACCTTCCTCGTTGGCAATTAAACAAACTGCGCAATCATCTCGGAAAGCTTaGCAATTTGGGGGTTTATAC | + |
|
Preference number: 5 (lower is better) Translates to: PLHRSGLPSSLAIKQTAQSSRKA*QFGGLY Trigger: GTATAAACCCCCAAATTGCAAAGCTTTCCGAGATGA...TTGCGCAGTTTGTTTAATTGCCAACGAGGAAGGTAGACCAGACCTGTGGAGGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS-3UTR CAA 90 bp | TTCCCTCTCTGTTCTTATCCGGGGCTTTGTGCCATTAGAGATGTTTTGGATGTGGCCCAGCAAGTTTGTTaGATCTTCCAGACCACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: FPLCSYPGLCAIRDVLDVAQQVC*IFQTTA Trigger: TGCTGTGGTCTGGAAGATCAAACAAACTTGCTGGGC...CACATCCAAAACATCTCTAATGGCACAAAGCCCCGGATAAGAACAGAGAGGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS-3UTR CAA 90 bp | GTCATGGTGAGATGCAACCTAACTATGCCTTATAAGATGCAACTACATAGTCTGACAGACGTGCTGCAGTaGCTGCTGGCTGAGATGCAT | + |
|
Preference number: 5 (lower is better) Translates to: VMVRCNLTMPYKMQLHSLTDVLQ*LLAEMH Trigger: ATGCATCTCAGCCAGCAGCAACTGCAGCACGTCTGT...CAGACTATGTAGTTGCATCTTATAAGGCATAGTTAGGTTGCATCTCACCATGAC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS-3UTR CAA 90 bp | TATAAGGAGACAAAATGGCAATCACAGCTGCCAGGACTTGTTCTTTTTCTACTCGAGAGGTGCTTCCGATaGCGGACTCCAGAAGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: YKETKWQSQLPGLVLFLLERCFR*RTPEVL Trigger: CAAGACTTCTGGAGTCCGCAATCGGAAGCACCTCTC...GAGTAGAAAAAGAACAAGTCCTGGCAGCTGTGATTGCCATTTTGTCTCCTTATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS CCA 90 bp | TCACTTCGTCATACACACTTGTGTGGCCATATCCACCTTGCACAATaGCTCCTTTCGTTTCTGGAACTAGCCAAGTGTTTGAGGAGATAT | + |
|
Preference number: 5 (lower is better) Translates to: SLRHTHLCGHIHLAQ*LLSFLELAKCLRRY Trigger: ATATCTCCTCAAACACTTGGCTAGTTCCAGAAACGAAAGGAGCCATTGTGCAAGGTGGATATGGCCACACAAGTGTGTATGACGAAGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS-3UTR CAA 90 bp | AGGACCAATGCTGCCAATTTCATGGGGAAATCAACATGTAAAGTGTCCAAAAGAGAAGGTTCTGTTAACTaGAACCTGCCCTGGCAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RTNAANFMGKSTCKVSKREGSVN*NLPWQC Trigger: GCACTGCCAGGGCAGGTTCAAGTTAACAGAACCTTC...TCTTTTGGACACTTTACATGTTGATTTCCCCATGAAATTGGCAGCATTGGTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS-3UTR CAA 90 bp | TCTGTTCTTATCCGGGGCTTTGTGCCATTAGAGATGTTTTGGATGTGGCCATCAACCTTAGCACTGCATTaGGATAGCCTTCAATTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SVLIRGFVPLEMFWMWPSTLALH*DSLQLA Trigger: GGCTAATTGAAGGCTATCCAAATGCAGTGCTAAGGT...TGATGGCCACATCCAAAACATCTCTAATGGCACAAAGCCCCGGATAAGAACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS GCA 90 bp | TGCTTCCCCTTTCCAGTATTTGTCGCATTCACAATACACTTGACTTaGAACAGAGACACTGGTTGTACACTTTCCATGACCAGAGCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: CFPFPVFVAFTIHLT*NRDTGCTLSMTRAV Trigger: AACTGCTCTGGTCATGGAAAGTGTACAACCAGTGTCTCTGTTGCAAGTCAAGTGTATTGTGAATGCGACAAATACTGGAAAGGGGAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS CCA 90 bp | GACGACTGCAGAATGCCCAAATCGGTTGACATCTCTATGGAGATTTaGTTTAGGCAATGTCTTCCATTCGTCACAAGCTATGTCATATGC | + |
|
Preference number: 5 (lower is better) Translates to: DDCRMPKSVDISMEI*FRQCLPFVTSYVIC Trigger: GCATATGACATAGCTTGTGACGAATGGAAGACATTGCCTAAACCAAATCTCCATAGAGATGTCAACCGATTTGGGCATTCTGCAGTCGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS CCA 90 bp | CCATTGATGACGACTGCAGAATGCCCAAATCGGTTGACATCTCTATaGAGATTTGGTTTAGGCAATGTCTTCCATTCGTCACAAGCTATG | + |
|
Preference number: 5 (lower is better) Translates to: PLMTTAECPNRLTSL*RFGLGNVFHSSQAM Trigger: CATAGCTTGTGACGAATGGAAGACATTGCCTAAACCAAATCTCCATAGAGATGTCAACCGATTTGGGCATTCTGCAGTCGTCATCAATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS-3UTR CAA 90 bp | TTCTTTTTCTACTCTGATGCCAATGTCCTAACTTTGCTAACGAGGCAGAAAACTGTGGCCATATCCACCTaGCACAATGGCTCCTTTCGT | + |
|
Preference number: 5 (lower is better) Translates to: FFFYSDANVLTLLTRQKTVAIST*HNGSFR Trigger: ACGAAAGGAGCCATTGTGCAAGGTGGATATGGCCAC...AGTTTTCTGCCTCGTTAGCAAAGTTAGGACATTGGCATCAGAGTAGAAAAAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS-3UTR CAA 90 bp | GTCATGGTGAGATGCAACCTAACTATGCCTTATAAGATGCAACTACATAGTCTGGCCTCGCGTTCTGATTaGGGCTTACTACAGGCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: VMVRCNLTMPYKMQLHSLASRSD*GLLQAF Trigger: AAAAGCCTGTAGTAAGCCCAAATCAGAACGCGAGGC...CAGACTATGTAGTTGCATCTTATAAGGCATAGTTAGGTTGCATCTCACCATGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS-3UTR CAA 90 bp | GTGAGATGCAACCTAACTATGCCTTATAAGATGCAACTACATAGTCTGTGGTCATCAGACACAAGTTCCTaGACGTGTGGAGAGGTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: VRCNLTMPYKMQLHSLWSSDTSS*TCGEVL Trigger: AAGCACCTCTCCACACGTCAAGGAACTTGTGTCTGA...TGACCACAGACTATGTAGTTGCATCTTATAAGGCATAGTTAGGTTGCATCTCAC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS TCA 90 bp | CTGACATTCCTGCTGCCGCTGATCCCACTGGCAATTCAAGTTGAGTaGACAGCTTTTACAGCTTGTAAGTTTGTTACAAATCTGCTCATT | + |
|
Preference number: 5 (lower is better) Translates to: LTFLLPLIPLAIQVE*TAFTACKFVTNLLI Trigger: AATGAGCAGATTTGTAACAAACTTACAAGCTGTAAAAGCTGTTCACTCAACTTGAATTGCCAGTGGGATCAGCGGCAGCAGGAATGTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS TCA 90 bp | ATTAAAGTTGTTGGAAGCATTAATCGAAATGTCCAAGTTTTTGTTTaGCTGCTCTGGGTTGGCGATGAAGTTGATGGCAGTGTGGTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: IKVVGSINRNVQVFV*LLWVGDEVDGSVVP Trigger: CGGCACCACACTGCCATCAACTTCATCGCCAACCCAGAGCAGTCAAACAAAAACTTGGACATTTCGATTAATGCTTCCAACAACTTTAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS-3UTR CAA 90 bp | GTCATGGTGAGATGCAACCTAACTATGCCTTATAAGATGCAACTACATAGTCTGCTTCGTCATACACACTaGTGTGGCCATATCCACCTT | + |
|
Preference number: 5 (lower is better) Translates to: VMVRCNLTMPYKMQLHSLLRHTH*CGHIHL Trigger: AAGGTGGATATGGCCACACAAGTGTGTATGACGAAG...CAGACTATGTAGTTGCATCTTATAAGGCATAGTTAGGTTGCATCTCACCATGAC 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS-3UTR CAA 90 bp | TCTTATCCGGGGCTTTGTGCCATTAGAGATGTTTTGGATGTGGCCATCAATGAAGAAATGTCCAAGTTTTaGTTTGACTGCTCTGGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SYPGLCAIRDVLDVAINEEMSKF*FDCSGL Trigger: CAACCCAGAGCAGTCAAACAAAAACTTGGACATTTC...TTCATTGATGGCCACATCCAAAACATCTCTAATGGCACAAAGCCCCGGATAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS TCA 90 bp | TATAGCAATAAAGTTTGGCATTATCATAGCTTTCTCGACTGGAATTaGTTCGAAGACAAGCGTCCCCAACATGATTCCAGCCTTCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: YSNKVWHYHSFLDWN*FEDKRPQHDSSLLH Trigger: GTGGAGAAGGCTGGAATCATGTTGGGGACGCTTGTCTTCGAATCAATTCCAGTCGAGAAAGCTATGATAATGCCAAACTTTATTGCTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS GCA 90 bp | ATTTGGTTTAGGCAATGTCTTCCATTCGTCACAAGCTATGTCATATaGCAGGAAATCGGCAGAAAAACATTTTGCACCGTTACTCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: IWFRQCLPFVTSYVI*QEIGRKTFCTVTQG Trigger: TCCCTGAGTAACGGTGCAAAATGTTTTTCTGCCGATTTCCTGGCATATGACATAGCTTGTGACGAATGGAAGACATTGCCTAAACCAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS-3UTR CAA 90 bp | TCTGTTCTTATCCGGGGCTTTGTGCCATTAGAGATGTTTTGGATGTGGCCATCAACTGACCACGTAATGTaGAGATTAAAGTTGTTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SVLIRGFVPLEMFWMWPSTDHVM*RLKLLE Trigger: TTCCAACAACTTTAATCTCAACATTACGTGGTCAGT...TGATGGCCACATCCAAAACATCTCTAATGGCACAAAGCCCCGGATAAGAACAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS GCA 90 bp | AGTGATTCTTATTCCAAACACATTTTATCCCTGGACCAGCGTTTCTaGACAGTTCTTCATCTCGGAAAGCTTTGCAATTTGGGGGTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: SDSYSKHILSLDQRF*TVLHLGKLCNLGVY Trigger: ATAAACCCCCAAATTGCAAAGCTTTCCGAGATGAAGAACTGTGCAGAAACGCTGGTCCAGGGATAAAATGTGTTTGGAATAAGAATCACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR CAA 90 bp | GTCATGGTGAGATGCAACCTAACTATGCCTTATAAGATGCAACTACATAGTCTGTCCCCTTTCCAGTATTaGTCGCATTCACAATACACT | + |
|
Preference number: 5 (lower is better) Translates to: VMVRCNLTMPYKMQLHSLSPFQY*SHSQYT Trigger: AGTGTATTGTGAATGCGACAAATACTGGAAAGGGGA...CAGACTATGTAGTTGCATCTTATAAGGCATAGTTAGGTTGCATCTCACCATGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR CAA 90 bp | CTACCTTCCTCGTTGGCAATTAAACAAACTGCGCAACTCTTTCATTTTTCAATACCTTGCCAACTATCGTaGCAGACACAGAGTTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LPSSLAIKQTAQLFHFSIPCQLS*QTQSFS Trigger: AGAGAAACTCTGTGTCTGCAACGATAGTTGGCAAGG...TATTGAAAAATGAAAGAGTTGCGCAGTTTGTTTAATTGCCAACGAGGAAGGTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR CAA 90 bp | TATAAGGAGACAAAATGGCAATCACAGCTGCCAGGACTTGTTCTTTTTCTACTCGAACTAGCCAAGTGTTaGAGGAGATATGGTATTCCT | + |
|
Preference number: 5 (lower is better) Translates to: YKETKWQSQLPGLVLFLLELAKC*RRYGIP Trigger: AGGAATACCATATCTCCTCAAACACTTGGCTAGTTC...GAGTAGAAAAAGAACAAGTCCTGGCAGCTGTGATTGCCATTTTGTCTCCTTATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS CCA 90 bp | ACCAGCGTTTCTGCACAGTTCTTCATCTCGGAAAGCTTTGCAATTTaGGGGTTTATACACAAGGATATCATTAAGGAGTACACTAGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: TSVSAQFFISESFAI*GFIHKDIIKEYTRK Trigger: TTTTCTAGTGTACTCCTTAATGATATCCTTGTGTATAAACCCCCAAATTGCAAAGCTTTCCGAGATGAAGAACTGTGCAGAAACGCTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR CAA 90 bp | AGGACCAATGCTGCCAATTTCATGGGGAAATCAACATGTAAAGTGTCCAAAAGAAGATCCATGATTGTGTaGTGTTGTGAAAACGCAATC | + |
|
Preference number: 5 (lower is better) Translates to: RTNAANFMGKSTCKVSKRRSMIV*CCENAI Trigger: GATTGCGTTTTCACAACACAACACAATCATGGATCT...TCTTTTGGACACTTTACATGTTGATTTCCCCATGAAATTGGCAGCATTGGTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS TCA 90 bp | TTTCCTCCAAAAATAAGCATAGCTCCATTGATAAGAACAGCTGAGTaGAGGTATCTGGCAAACCCACTTTCTTTCAAAATAGTCCAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: FPPKISIAPLIRTAE*RYLANPLSFKIVQV Trigger: GACTTGGACTATTTTGAAAGAAAGTGGGTTTGCCAGATACCTTCACTCAGCTGTTCTTATCAATGGAGCTATGCTTATTTTTGGAGGAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS TCA 90 bp | GGTATTTCCTCCAAAAATAAGCATAGCTCCATTGATAAGAACAGCTaGGTGAAGGTATCTGGCAAACCCACTTTCTTTCAAAATAGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GISSKNKHSSIDKNS*VKVSGKPTFFQNSP Trigger: TGGACTATTTTGAAAGAAAGTGGGTTTGCCAGATACCTTCACTCAGCTGTTCTTATCAATGGAGCTATGCTTATTTTTGGAGGAAATACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS TCA 90 bp | GATATCATTAAGGAGTACACTAGAAAATCCACCAAATATATACATTaGCCCATTGATGACGACTGCAGAATGCCCAAATCGGTTGACATC | + |
|
Preference number: 5 (lower is better) Translates to: DIIKEYTRKSTKYIH*PIDDDCRMPKSVDI Trigger: GATGTCAACCGATTTGGGCATTCTGCAGTCGTCATCAATGGGTCAATGTATATATTTGGTGGATTTTCTAGTGTACTCCTTAATGATATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS-3UTR CAA 90 bp | ATTAGAGATGTTTTGGATGTGGCCATCAATGAACTTGTCTTTAGAATTCAGTCTCGGACTCCAGAAGTCTaGTCTTTATTATCAGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: IRDVLDVAINELVFRIQSRTPEV*SLLSEG Trigger: GCCTTCTGATAATAAAGACAAGACTTCTGGAGTCCG...AGACTGAATTCTAAAGACAAGTTCATTGATGGCCACATCCAAAACATCTCTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS GCA 72 bp | TGCTGCTGCACCACATGCACTCCATGCCGCTGCTCGTaGAGTTGGCGCAGGAGGTCCTCAGGGAGCACGGCT | + |
|
Preference number: 6 (lower is better) Translates to: CCCTTCTPCRCS*SWRRRSSGSTA Trigger: AGCCGTGCTCCCTGAGGACCTCCTGCGCCAACTGCACGAGCAGCGGCATGGAGTGCATGTGGTGCAGCAGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS CCA 72 bp | TGCACCACATGCACTCCATGCCGCTGCTCGTGCAGTTaGCGCAGGAGGTCCTCAGGGAGCACGGCTTCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: CTTCTPCRCSCS*RRRSSGSTASC Trigger: GCAAGAAGCCGTGCTCCCTGAGGACCTCCTGCGCCAACTGCACGAGCAGCGGCATGGAGTGCATGTGGTGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS CAA 90 bp | TCGCATGGCCGCCGCACGTGCAAGCTGTGCACTGCCCACCGTTGGTaGGGTCTCCATAGTACCCTGGCATGCATTCCTGACACTGTCGCC | + |
|
Preference number: 6 (lower is better) Translates to: SHGRRTCKLCTAHRW*GLHSTLACIPDTVA Trigger: GGCGACAGTGTCAGGAATGCATGCCAGGGTACTATGGAGACCCAACCAACGGTGGGCAGTGCACAGCTTGCACGTGCGGCGGCCATGCGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS CCA 72 bp | GACCGGAGAAGCAGGAGCCAGTCCTCTCGCAGGGCTTaGACTGGGACACCTGAGCATAGAGCGCCAGGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: DRRSRSQSSRRA*TGTPEHRAPGR Trigger: TCTACCTGGCGCTCTATGCTCAGGTGTCCCAGTCCAAGCCCTGCGAGAGGACTGGCTCCTGCTTCTCCGGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS CCA 72 bp | GGGCAGAGGCTGGTGTCAAGAACCACGTCACTGTTGTaGACCCCCGCGAGTTTCATTGGGCCCCGGGAAGAC | + |
|
Preference number: 6 (lower is better) Translates to: GQRLVSRTTSLL*TPASFIGPRED Trigger: GTCTTCCCGGGGCCCAATGAAACTCGCGGGGGTCCACAACAGTGACGTGGTTCTTGACACCAGCCTCTGCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS CAA 72 bp | CGCCGCACGTGCAAGCTGTGCACTGCCCACCGTTGGTaGGGTCTCCATAGTACCCTGGCATGCATTCCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: RRTCKLCTAHRW*GLHSTLACIPD Trigger: GTCAGGAATGCATGCCAGGGTACTATGGAGACCCAACCAACGGTGGGCAGTGCACAGCTTGCACGTGCGGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS GCA 72 bp | AGTTGGCGCAGGAGGTCCTCAGGGAGCACGGCTTCTTaGACGGCCTCGCGTTCTGATTTGGGCTTACTACAG | + |
|
Preference number: 6 (lower is better) Translates to: SWRRRSSGSTAS*TASRSDLGLLQ Trigger: CTGTAGTAAGCCCAAATCAGAACGCGAGGCCGTGCAAGAAGCCGTGCTCCCTGAGGACCTCCTGCGCCAACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS CCA 72 bp | GCACTGCCCACCGTTGGTTGGGTCTCCATAGTACCCTaGCATGCATTCCTGACACTGTCGCCCAGTGGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: ALPTVGWVSIVP*HAFLTLSPSGE Trigger: CTCACCACTGGGCGACAGTGTCAGGAATGCATGCCAGGGTACTATGGAGACCCAACCAACGGTGGGCAGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS TCA 72 bp | ATGATGTGTGCCGAGTGTCCCTCCACAGCGTACTGCTaGCTGTGGCCAAGGACAGTGGGGGTTTTCGTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: MMCAECPSTAYC*LWPRTVGVFVL Trigger: GAGCACGAAAACCCCCACTGTCCTTGGCCACAGTCAGCAGTACGCTGTGGAGGGACACTCGGCACACATCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS CAA 90 bp | TGGTGTCAAGAACCACGTCACTGTTGTGGACCCCCGCGAGTTTCATaGGGCCCCGGGAAGACCCTTCGATGCAATAGCCTCTTCCTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: WCQEPRHCCGPPRVS*GPGKTLRCNSLFLC Trigger: ACACAGGAAGAGGCTATTGCATCGAAGGGTCTTCCCGGGGCCCAATGAAACTCGCGGGGGTCCACAACAGTGACGTGGTTCTTGACACCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS GCA 72 bp | CATGACCACGTCTCTACTGTCCAGCTCCATGATGTGTaGCGAGTGTCCCTCCACAGCGTACTGCTGACTGTG | + |
|
Preference number: 6 (lower is better) Translates to: HDHVSTVQLHDV*RVSLHSVLLTV Trigger: CACAGTCAGCAGTACGCTGTGGAGGGACACTCGGCACACATCATGGAGCTGGACAGTAGAGACGTGGTCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS CAA 90 bp | TTTCTGACAGACGTGCTGCAGTTGCTGCTGGCTGAGATGCATTTCTaGTCGTCACACCACTGGCACCCGTTCGTGTTGGCTGTGCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: FLTDVLQLLLAEMHF*SSHHWHPFVLAVQL Trigger: CAGCTGCACAGCCAACACGAACGGGTGCCAGTGGTGTGACGACAAGAAATGCATCTCAGCCAGCAGCAACTGCAGCACGTCTGTCAGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS CAA 90 bp | AGGTCCTCAGGGAGCACGGCTTCTTGCACGGCCTCGCGTTCTGATTaGGGCTTACTACAGGCTTTTCACAAACGAGTCCATCTGCCATGG | + |
|
Preference number: 6 (lower is better) Translates to: RSSGSTASCTASRSD*GLLQAFHKRVHLPW Trigger: CCATGGCAGATGGACTCGTTTGTGAAAAGCCTGTAGTAAGCCCAAATCAGAACGCGAGGCCGTGCAAGAAGCCGTGCTCCCTGAGGACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS CCA 72 bp | CCCAACATGATTCCAGCCTTCTCCACAAAGGTGAGCTaGCAAAGCCTGACATTCCTGCTGCCGCTGATCCCA | + |
|
Preference number: 6 (lower is better) Translates to: PNMIPAFSTKVS*QSLTFLLPLIP Trigger: TGGGATCAGCGGCAGCAGGAATGTCAGGCTTTGCCAGCTCACCTTTGTGGAGAAGGCTGGAATCATGTTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS CCA 72 bp | GACTGCTCTGGGTTGGCGATGAAGTTGATGGCAGTGTaGTGCCGGTCATCTTCCTGCAGCAAGCTGAAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: DCSGLAMKLMAV*CRSSSCSKLKV Trigger: TACCTTCAGCTTGCTGCAGGAAGATGACCGGCACCACACTGCCATCAACTTCATCGCCAACCCAGAGCAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS TCA 72 bp | CTCAGGGAGCACGGCTTCTTGCACGGCCTCGCGTTCTaGTTTGGGCTTACTACAGGCTTTTCACAAACGAGT | + |
|
Preference number: 6 (lower is better) Translates to: LREHGFLHGLAF*FGLTTGFSQTS Trigger: ACTCGTTTGTGAAAAGCCTGTAGTAAGCCCAAATCAGAACGCGAGGCCGTGCAAGAAGCCGTGCTCCCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS GCA 72 bp | TGTCGTCACACCACTGGCACCCGTTCGTGTTGGCTGTaGAGCTGGCACAGTCAGCATATCTGTAACATCTGT | + |
|
Preference number: 6 (lower is better) Translates to: CRHTTGTRSCWL*SWHSQHICNIC Trigger: ACAGATGTTACAGATATGCTGACTGTGCCAGCTGCACAGCCAACACGAACGGGTGCCAGTGGTGTGACGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS CCA 72 bp | GGAGCACGGCTTCTTGCACGGCCTCGCGTTCTGATTTaGGCTTACTACAGGCTTTTCACAAACGAGTCCATC | + |
|
Preference number: 6 (lower is better) Translates to: GARLLARPRVLI*AYYRLFTNESI Trigger: GATGGACTCGTTTGTGAAAAGCCTGTAGTAAGCCCAAATCAGAACGCGAGGCCGTGCAAGAAGCCGTGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS CAA 72 bp | GGGAGCACGGCTTCTTGCACGGCCTCGCGTTCTGATTaGGGCTTACTACAGGCTTTTCACAAACGAGTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: GSTASCTASRSD*GLLQAFHKRVH Trigger: ATGGACTCGTTTGTGAAAAGCCTGTAGTAAGCCCAAATCAGAACGCGAGGCCGTGCAAGAAGCCGTGCTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS GCA 72 bp | GAGGTCGTCCACCAGCCCGTACTTATTGCCAGGCAATaGTTTGTAGCCTCCGTGAACATAGATGGACTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: EVVHQPVLIARQ*FVASVNIDGLG Trigger: ACCAAGTCCATCTATGTTCACGGAGGCTACAAAGCATTGCCTGGCAATAAGTACGGGCTGGTGGACGACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS GCA 72 bp | CAGGCTTTTCACAAACGAGTCCATCTGCCATGGATGTaGAAGGGTTTGCTTTTAACCCTGCCACTGCAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: QAFHKRVHLPWM*KGLLLTLPLQP Trigger: GGGCTGCAGTGGCAGGGTTAAAAGCAAACCCTTGCACATCCATGGCAGATGGACTCGTTTGTGAAAAGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS CAA 90 bp | TGTCGCCCAGTGGTGAGATTCTTACACTGCTCACAGACGTTGTTGTaGATGCACGTGCTGTGTCCATTACACTGGCAAGCTGGACACTGG | + |
|
Preference number: 6 (lower is better) Translates to: CRPVVRFLHCSQTLL*MHVLCPLHWQAGHW Trigger: CCAGTGTCCAGCTTGCCAGTGTAATGGACACAGCACGTGCATCAACAACAACGTCTGTGAGCAGTGTAAGAATCTCACCACTGGGCGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS CAA 90 bp | CACTGTCGCCCAGTGGTGAGATTCTTACACTGCTCACAGACGTTGTaGTTGATGCACGTGCTGTGTCCATTACACTGGCAAGCTGGACAC | + |
|
Preference number: 6 (lower is better) Translates to: HCRPVVRFLHCSQTL*LMHVLCPLHWQAGH Trigger: GTGTCCAGCTTGCCAGTGTAATGGACACAGCACGTGCATCAACAACAACGTCTGTGAGCAGTGTAAGAATCTCACCACTGGGCGACAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS TCA 72 bp | AAGGAGACATGTCCTCCCATCCCCAGTAGGATATGTTaGTCTTGCGTAGGCCTACCCACGGTGACACTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: KETCPPIPSRIC*SCVGLPTVTLS Trigger: AGAAAGTGTCACCGTGGGTAGGCCTACGCAAGATCAACATATCCTACTGGGGATGGGAGGACATGTCTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS CAA 72 bp | CGCCCAGTGGTGAGATTCTTACACTGCTCACAGACGTaGTTGTTGATGCACGTGCTGTGTCCATTACACTGG | + |
|
Preference number: 6 (lower is better) Translates to: RPVVRFLHCSQT*LLMHVLCPLHW Trigger: CCAGTGTAATGGACACAGCACGTGCATCAACAACAACGTCTGTGAGCAGTGTAAGAATCTCACCACTGGGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS CAA 72 bp | AAGTTTTTGTTTGACTGCTCTGGGTTGGCGATGAAGTaGATGGCAGTGTGGTGCCGGTCATCTTCCTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: KFLFDCSGLAMK*MAVWCRSSSCS Trigger: GCTGCAGGAAGATGACCGGCACCACACTGCCATCAACTTCATCGCCAACCCAGAGCAGTCAAACAAAAACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS CAA 90 bp | CAGGCTTTTCACAAACGAGTCCATCTGCCATGGATGTGCAAGGGTTaGCTTTTAACCCTGCCACTGCAGCCCTTTCTAAGTAGGCACAGA | + |
|
Preference number: 6 (lower is better) Translates to: QAFHKRVHLPWMCKG*LLTLPLQPFLSRHR Trigger: TCTGTGCCTACTTAGAAAGGGCTGCAGTGGCAGGGTTAAAAGCAAACCCTTGCACATCCATGGCAGATGGACTCGTTTGTGAAAAGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS CAA 90 bp | GAAATGTCCAAGTTTTTGTTTGACTGCTCTGGGTTGGCGATGAAGTaGATGGCAGTGTGGTGCCGGTCATCTTCCTGCAGCAAGCTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: EMSKFLFDCSGLAMK*MAVWCRSSSCSKLK Trigger: CTTCAGCTTGCTGCAGGAAGATGACCGGCACCACACTGCCATCAACTTCATCGCCAACCCAGAGCAGTCAAACAAAAACTTGGACATTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS TCA 72 bp | TGGCCAAGGACAGTGGGGGTTTTCGTGCTCCATGATTaGCTGCGTACGTTAAACACCCATAATTCATCGGTG | + |
|
Preference number: 6 (lower is better) Translates to: WPRTVGVFVLHD*LRTLNTHNSSV Trigger: CACCGATGAATTATGGGTGTTTAACGTACGCAGTCAATCATGGAGCACGAAAACCCCCACTGTCCTTGGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS GCA 72 bp | CGTACTTATAGAGGTCGTCCACCAGCCCGTACTTATTaGCAGGCAATGCTTTGTAGCCTCCGTGAACATAGA | + |
|
Preference number: 6 (lower is better) Translates to: RTYRGRPPARTY*QAMLCSLREHR Trigger: TCTATGTTCACGGAGGCTACAAAGCATTGCCTGGCAATAAGTACGGGCTGGTGGACGACCTCTATAAGTACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS CAA 72 bp | CAGCCCTTTCTAAGTAGGCACAGAATCCAGAGTCATTaGGCTCACCAGGAAGCCACTGCAGGCTTGTATTTG | + |
|
Preference number: 6 (lower is better) Translates to: QPFLSRHRIQSH*AHQEATAGLYL Trigger: CAAATACAAGCCTGCAGTGGCTTCCTGGTGAGCCAAATGACTCTGGATTCTGTGCCTACTTAGAAAGGGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS CAA 72 bp | CACAAACGAGTCCATCTGCCATGGATGTGCAAGGGTTaGCTTTTAACCCTGCCACTGCAGCCCTTTCTAAGT | + |
|
Preference number: 6 (lower is better) Translates to: HKRVHLPWMCKG*LLTLPLQPFLS Trigger: ACTTAGAAAGGGCTGCAGTGGCAGGGTTAAAAGCAAACCCTTGCACATCCATGGCAGATGGACTCGTTTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS CAA 90 bp | AGCCTCCGTGAACATAGATGGACTTGGTCACTTCGTCATACACACTaGTGTGGCCATATCCACCTTGCACAATGGCTCCTTTCGTTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SLREHRWTWSLRHTH*CGHIHLAQWLLSFL Trigger: CAGAAACGAAAGGAGCCATTGTGCAAGGTGGATATGGCCACACAAGTGTGTATGACGAAGTGACCAAGTCCATCTATGTTCACGGAGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS CCA 72 bp | GGCCCGACCTACGGAAGGGCTGAAGGGTTTAACATTTaGCAAAATCCAGTAAGACTCAGTAGAAGGGACATT | + |
|
Preference number: 6 (lower is better) Translates to: GPTYGRAEGFNI*QNPVRLSRRDI Trigger: AATGTCCCTTCTACTGAGTCTTACTGGATTTTGCCAAATGTTAAACCCTTCAGCCCTTCCGTAGGTCGGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS CAA 72 bp | CTCAGTAGAAGGGACATTCAGAGAACAATCTGGGCCTaGCCAACTATCGTTGCAGACACAGAGTTTCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LSRRDIQRTIWA*PTIVADTEFLS Trigger: GGAGAGAAACTCTGTGTCTGCAACGATAGTTGGCAAGGCCCAGATTGTTCTCTGAATGTCCCTTCTACTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS CAA 72 bp | CTGCGTACGTTAAACACCCATAATTCATCGGTGACGTaGCCATCACTGGTCTCCATTCTGCCTCCGTACATA | + |
|
Preference number: 6 (lower is better) Translates to: LRTLNTHNSSVT*PSLVSILPPYI Trigger: TATGTACGGAGGCAGAATGGAGACCAGTGATGGCAACGTCACCGATGAATTATGGGTGTTTAACGTACGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS CAA 72 bp | GTGGTGAGATTCTTACACTGCTCACAGACGTTGTTGTaGATGCACGTGCTGTGTCCATTACACTGGCAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: VVRFLHCSQTLL*MHVLCPLHWQA Trigger: AGCTTGCCAGTGTAATGGACACAGCACGTGCATCAACAACAACGTCTGTGAGCAGTGTAAGAATCTCACCAC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS CAA 72 bp | CCAGTGGTGAGATTCTTACACTGCTCACAGACGTTGTaGTTGATGCACGTGCTGTGTCCATTACACTGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: PVVRFLHCSQTL*LMHVLCPLHWQ Trigger: TTGCCAGTGTAATGGACACAGCACGTGCATCAACAACAACGTCTGTGAGCAGTGTAAGAATCTCACCACTGG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS CAA 72 bp | ATCGAAATGTCCAAGTTTTTGTTTGACTGCTCTGGGTaGGCGATGAAGTTGATGGCAGTGTGGTGCCGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: IEMSKFLFDCSG*AMKLMAVWCRS Trigger: TGACCGGCACCACACTGCCATCAACTTCATCGCCAACCCAGAGCAGTCAAACAAAAACTTGGACATTTCGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS CAA 90 bp | GAAGCATTAATCGAAATGTCCAAGTTTTTGTTTGACTGCTCTGGGTaGGCGATGAAGTTGATGGCAGTGTGGTGCCGGTCATCTTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: EALIEMSKFLFDCSG*AMKLMAVWCRSSSC Trigger: GCAGGAAGATGACCGGCACCACACTGCCATCAACTTCATCGCCAACCCAGAGCAGTCAAACAAAAACTTGGACATTTCGATTAATGCTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS TCA 72 bp | AGAAGTCTTGTCTTTATTATCAGAAGGCTTCTGCTGTaGGATGTCTATCAGGGCACTGGCGATAGCAAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: RSLVFIIRRLLL*DVYQGTGDSKA Trigger: GGCCTTGCTATCGCCAGTGCCCTGATAGACATCTCACAGCAGAAGCCTTCTGATAATAAAGACAAGACTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS GCA 72 bp | CATTCAGAGAACAATCTGGGCCTTGCCAACTATCGTTaGAGACACAGAGTTTCTCTCCTGTTAGGTCACAGT | + |
|
Preference number: 6 (lower is better) Translates to: HSENNLGLANYR*RHRVSLLLGHS Trigger: ACTGTGACCTAACAGGAGAGAAACTCTGTGTCTGCAACGATAGTTGGCAAGGCCCAGATTGTTCTCTGAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS GCA 72 bp | TCAGTAGAAGGGACATTCAGAGAACAATCTGGGCCTTaGCAACTATCGTTGCAGACACAGAGTTTCTCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SVEGTFREQSGP*QLSLQTQSFSP Trigger: AGGAGAGAAACTCTGTGTCTGCAACGATAGTTGGCAAGGCCCAGATTGTTCTCTGAATGTCCCTTCTACTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
||
| CDS GCA 72 bp | ACTTCGTCATACACACTTGTGTGGCCATATCCACCTTaGACAATGGCTCCTTTCGTTTCTGGAACTAGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: TSSYTLVWPYPP*TMAPFVSGTSQ Trigger: TTGGCTAGTTCCAGAAACGAAAGGAGCCATTGTGCAAGGTGGATATGGCCACACAAGTGTGTATGACGAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS GCA 72 bp | CACAAGTTCCTTGACGTGTGGAGAGGTGCTTCCGATTaGGGACTCCAGAAGTCTTGTCTTTATTATCAGAAG | + |
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Preference number: 6 (lower is better) Translates to: HKFLDVWRGASD*GLQKSCLYYQK Trigger: CTTCTGATAATAAAGACAAGACTTCTGGAGTCCGCAATCGGAAGCACCTCTCCACACGTCAAGGAACTTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS CCA 72 bp | CATACACACTTGTGTGGCCATATCCACCTTGCACAATaGCTCCTTTCGTTTCTGGAACTAGCCAAGTGTTTG | + |
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Preference number: 6 (lower is better) Translates to: HTHLCGHIHLAQ*LLSFLELAKCL Trigger: CAAACACTTGGCTAGTTCCAGAAACGAAAGGAGCCATTGTGCAAGGTGGATATGGCCACACAAGTGTGTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS CCA 72 bp | GCAATGCTTTGTAGCCTCCGTGAACATAGATGGACTTaGTCACTTCGTCATACACACTTGTGTGGCCATATC | + |
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Preference number: 6 (lower is better) Translates to: AMLCSLREHRWT*SLRHTHLCGHI Trigger: GATATGGCCACACAAGTGTGTATGACGAAGTGACCAAGTCCATCTATGTTCACGGAGGCTACAAAGCATTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS CCA 72 bp | TTACTACAGGCTTTTCACAAACGAGTCCATCTGCCATaGATGTGCAAGGGTTTGCTTTTAACCCTGCCACTG | + |
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Preference number: 6 (lower is better) Translates to: LLQAFHKRVHLP*MCKGLLLTLPL Trigger: CAGTGGCAGGGTTAAAAGCAAACCCTTGCACATCCATGGCAGATGGACTCGTTTGTGAAAAGCCTGTAGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS CAA 72 bp | ACATTCAGAGAACAATCTGGGCCTTGCCAACTATCGTaGCAGACACAGAGTTTCTCTCCTGTTAGGTCACAG | + |
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Preference number: 6 (lower is better) Translates to: TFREQSGPCQLS*QTQSFSPVRSQ Trigger: CTGTGACCTAACAGGAGAGAAACTCTGTGTCTGCAACGATAGTTGGCAAGGCCCAGATTGTTCTCTGAATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS CAA 72 bp | GGGCAAGAGAATGTCCGTATCTCTGAAGAGGGCCCCTaGATACAGCACCTACATTCCATATACTGCTTTCTA | + |
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Preference number: 6 (lower is better) Translates to: GQENVRISEEGP*IQHLHSIYCFL Trigger: TAGAAAGCAGTATATGGAATGTAGGTGCTGTATCAAGGGGCCCTCTTCAGAGATACGGACATTCTCTTGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS GCA 72 bp | ACTCCAGAAGTCTTGTCTTTATTATCAGAAGGCTTCTaGTGTGAGATGTCTATCAGGGCACTGGCGATAGCA | + |
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Preference number: 6 (lower is better) Translates to: TPEVLSLLSEGF*CEMSIRALAIA Trigger: TGCTATCGCCAGTGCCCTGATAGACATCTCACAGCAGAAGCCTTCTGATAATAAAGACAAGACTTCTGGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS CAA 72 bp | GACCCATTGATGACGACTGCAGAATGCCCAAATCGGTaGACATCTCTATGGAGATTTGGTTTAGGCAATGTC | + |
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Preference number: 6 (lower is better) Translates to: DPLMTTAECPNR*TSLWRFGLGNV Trigger: GACATTGCCTAAACCAAATCTCCATAGAGATGTCAACCGATTTGGGCATTCTGCAGTCGTCATCAATGGGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS CAA 90 bp | ATGCTTCCCCTTTCCAGTATTTGTCGCATTCACAATACACTTGACTaGCAACAGAGACACTGGTTGTACACTTTCCATGACCAGAGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: MLPLSSICRIHNTLD*QQRHWLYTFHDQSS Trigger: ACTGCTCTGGTCATGGAAAGTGTACAACCAGTGTCTCTGTTGCAAGTCAAGTGTATTGTGAATGCGACAAATACTGGAAAGGGGAAGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS CCA 72 bp | ACGACTGCAGAATGCCCAAATCGGTTGACATCTCTATaGAGATTTGGTTTAGGCAATGTCTTCCATTCGTCA | + |
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Preference number: 6 (lower is better) Translates to: TTAECPNRLTSL*RFGLGNVFHSS Trigger: TGACGAATGGAAGACATTGCCTAAACCAAATCTCCATAGAGATGTCAACCGATTTGGGCATTCTGCAGTCGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS CAA 90 bp | CCTGATAGAGGGCAAGAGAATGTCCGTATCTCTGAAGAGGGCCCCTaGATACAGCACCTACATTCCATATACTGCTTTCTAAATTGTAAT | + |
|
Preference number: 6 (lower is better) Translates to: PDRGQENVRISEEGP*IQHLHSIYCFLNCN Trigger: ATTACAATTTAGAAAGCAGTATATGGAATGTAGGTGCTGTATCAAGGGGCCCTCTTCAGAGATACGGACATTCTCTTGCCCTCTATCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS CAA 90 bp | ATCCCTGGACCAGCGTTTCTGCACAGTTCTTCATCTCGGAAAGCTTaGCAATTTGGGGGTTTATACACAAGGATATCATTAAGGAGTACA | + |
|
Preference number: 6 (lower is better) Translates to: IPGPAFLHSSSSRKA*QFGGLYTRISLRST Trigger: TGTACTCCTTAATGATATCCTTGTGTATAAACCCCCAAATTGCAAAGCTTTCCGAGATGAAGAACTGTGCAGAAACGCTGGTCCAGGGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS TCA 72 bp | CTGCTGCCGCTGATCCCACTGGCAATTCAAGTTGAGTaGACAGCTTTTACAGCTTGTAAGTTTGTTACAAAT | + |
|
Preference number: 6 (lower is better) Translates to: LLPLIPLAIQVE*TAFTACKFVTN Trigger: ATTTGTAACAAACTTACAAGCTGTAAAAGCTGTTCACTCAACTTGAATTGCCAGTGGGATCAGCGGCAGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS TCA 72 bp | AAAGTTTGGCATTATCATAGCTTTCTCGACTGGAATTaGTTCGAAGACAAGCGTCCCCAACATGATTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: KVWHYHSFLDWN*FEDKRPQHDSS Trigger: GCTGGAATCATGTTGGGGACGCTTGTCTTCGAATCAATTCCAGTCGAGAAAGCTATGATAATGCCAAACTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS TCA 72 bp | GTTGGAAGCATTAATCGAAATGTCCAAGTTTTTGTTTaGCTGCTCTGGGTTGGCGATGAAGTTGATGGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: VGSINRNVQVFV*LLWVGDEVDGS Trigger: ACTGCCATCAACTTCATCGCCAACCCAGAGCAGTCAAACAAAAACTTGGACATTTCGATTAATGCTTCCAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS GCA 72 bp | AGGCAATGTCTTCCATTCGTCACAAGCTATGTCATATaGCAGGAAATCGGCAGAAAAACATTTTGCACCGTT | + |
|
Preference number: 6 (lower is better) Translates to: RQCLPFVTSYVI*QEIGRKTFCTV Trigger: AACGGTGCAAAATGTTTTTCTGCCGATTTCCTGGCATATGACATAGCTTGTGACGAATGGAAGACATTGCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS CAA 90 bp | CGTCACAAGCTATGTCATATGCCAGGAAATCGGCAGAAAAACATTTaGCACCGTTACTCAGGGAAGTATCATTATGGGTATTTCCTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: RHKLCHMPGNRQKNI*HRYSGKYHYGYFLQ Trigger: TTGGAGGAAATACCCATAATGATACTTCCCTGAGTAACGGTGCAAAATGTTTTTCTGCCGATTTCCTGGCATATGACATAGCTTGTGACG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS CAA 90 bp | ATATACATTGACCCATTGATGACGACTGCAGAATGCCCAAATCGGTaGACATCTCTATGGAGATTTGGTTTAGGCAATGTCTTCCATTCG | + |
|
Preference number: 6 (lower is better) Translates to: IYIDPLMTTAECPNR*TSLWRFGLGNVFHS Trigger: CGAATGGAAGACATTGCCTAAACCAAATCTCCATAGAGATGTCAACCGATTTGGGCATTCTGCAGTCGTCATCAATGGGTCAATGTATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS GCA 72 bp | TTTCCAGTATTTGTCGCATTCACAATACACTTGACTTaGAACAGAGACACTGGTTGTACACTTTCCATGACC | + |
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Preference number: 6 (lower is better) Translates to: FPVFVAFTIHLT*NRDTGCTLSMT Trigger: GGTCATGGAAAGTGTACAACCAGTGTCTCTGTTGCAAGTCAAGTGTATTGTGAATGCGACAAATACTGGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS GCA 72 bp | TATTCCAAACACATTTTATCCCTGGACCAGCGTTTCTaGACAGTTCTTCATCTCGGAAAGCTTTGCAATTTG | + |
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Preference number: 6 (lower is better) Translates to: YSKHILSLDQRF*TVLHLGKLCNL Trigger: CAAATTGCAAAGCTTTCCGAGATGAAGAACTGTGCAGAAACGCTGGTCCAGGGATAAAATGTGTTTGGAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS CCA 72 bp | AGAATGCCCAAATCGGTTGACATCTCTATGGAGATTTaGTTTAGGCAATGTCTTCCATTCGTCACAAGCTAT | + |
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Preference number: 6 (lower is better) Translates to: RMPKSVDISMEI*FRQCLPFVTSY Trigger: ATAGCTTGTGACGAATGGAAGACATTGCCTAAACCAAATCTCCATAGAGATGTCAACCGATTTGGGCATTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS CAA 72 bp | CTTTCCAGTATTTGTCGCATTCACAATACACTTGACTaGCAACAGAGACACTGGTTGTACACTTTCCATGAC | + |
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Preference number: 6 (lower is better) Translates to: LSSICRIHNTLD*QQRHWLYTFHD Trigger: GTCATGGAAAGTGTACAACCAGTGTCTCTGTTGCAAGTCAAGTGTATTGTGAATGCGACAAATACTGGAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS CAA 72 bp | CCAGCGTTTCTGCACAGTTCTTCATCTCGGAAAGCTTaGCAATTTGGGGGTTTATACACAAGGATATCATTA | + |
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Preference number: 6 (lower is better) Translates to: PAFLHSSSSRKA*QFGGLYTRISL Trigger: TAATGATATCCTTGTGTATAAACCCCCAAATTGCAAAGCTTTCCGAGATGAAGAACTGTGCAGAAACGCTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS CAA 90 bp | TTGAGATTAAAGTTGTTGGAAGCATTAATCGAAATGTCCAAGTTTTaGTTTGACTGCTCTGGGTTGGCGATGAAGTTGATGGCAGTGTGG | + |
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Preference number: 6 (lower is better) Translates to: LRLKLLEALIEMSKF*FDCSGLAMKLMAVW Trigger: CCACACTGCCATCAACTTCATCGCCAACCCAGAGCAGTCAAACAAAAACTTGGACATTTCGATTAATGCTTCCAACAACTTTAATCTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS CAA 90 bp | TCCCCAGATATGGTTCCACCTGTTGAGCCAACTGACCACGTAATGTaGAGATTAAAGTTGTTGGAAGCATTAATCGAAATGTCCAAGTTT | + |
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Preference number: 6 (lower is better) Translates to: SPDMVPPVEPTDHVM*RLKLLEALIEMSKF Trigger: AAACTTGGACATTTCGATTAATGCTTCCAACAACTTTAATCTCAACATTACGTGGTCAGTTGGCTCAACAGGTGGAACCATATCTGGGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS CAA 90 bp | CAACTGAAGAAGGTGACAAAGAACTGCACGAGATCCATGATTGTGTaGTGTTGTGAAAACGCAATCTGTATTTTAATAGGCCAGGAGAAG | + |
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Preference number: 6 (lower is better) Translates to: QLKKVTKNCTRSMIV*CCENAICILIGQEK Trigger: CTTCTCCTGGCCTATTAAAATACAGATTGCGTTTTCACAACACAACACAATCATGGATCTCGTGCAGTTCTTTGTCACCTTCTTCAGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS CAA 90 bp | CCACCTGTTGAGCCAACTGACCACGTAATGTTGAGATTAAAGTTGTaGGAAGCATTAATCGAAATGTCCAAGTTTTTGTTTGACTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: PPVEPTDHVMLRLKL*EALIEMSKFLFDCS Trigger: AGAGCAGTCAAACAAAAACTTGGACATTTCGATTAATGCTTCCAACAACTTTAATCTCAACATTACGTGGTCAGTTGGCTCAACAGGTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS CAA 90 bp | GTTCCACCTGTTGAGCCAACTGACCACGTAATGTTGAGATTAAAGTaGTTGGAAGCATTAATCGAAATGTCCAAGTTTTTGTTTGACTGC | + |
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Preference number: 6 (lower is better) Translates to: VPPVEPTDHVMLRLK*LEALIEMSKFLFDC Trigger: GCAGTCAAACAAAAACTTGGACATTTCGATTAATGCTTCCAACAACTTTAATCTCAACATTACGTGGTCAGTTGGCTCAACAGGTGGAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS GCA 72 bp | CTAGCCAAGTGTTTGAGGAGATATGGTATTCCTGTATaGTGCTGGTATAGCCATATATTGCAGAATATCCAA | + |
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Preference number: 6 (lower is better) Translates to: LAKCLRRYGIPV*CWYSHILQNIQ Trigger: TTGGATATTCTGCAATATATGGCTATACCAGCAGCATACAGGAATACCATATCTCCTCAAACACTTGGCTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS GCA 72 bp | AATATATACATTGACCCATTGATGACGACTGCAGAATaGCCAAATCGGTTGACATCTCTATGGAGATTTGGT | + |
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Preference number: 6 (lower is better) Translates to: NIYIDPLMTTAE*PNRLTSLWRFG Trigger: ACCAAATCTCCATAGAGATGTCAACCGATTTGGGCATTCTGCAGTCGTCATCAATGGGTCAATGTATATATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS CCA 72 bp | TCTGCACAGTTCTTCATCTCGGAAAGCTTTGCAATTTaGGGGTTTATACACAAGGATATCATTAAGGAGTAC | + |
|
Preference number: 6 (lower is better) Translates to: SAQFFISESFAI*GFIHKDIIKEY Trigger: GTACTCCTTAATGATATCCTTGTGTATAAACCCCCAAATTGCAAAGCTTTCCGAGATGAAGAACTGTGCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS CAA 72 bp | ACACTAGAAAATCCACCAAATATATACATTGACCCATaGATGACGACTGCAGAATGCCCAAATCGGTTGACA | + |
|
Preference number: 6 (lower is better) Translates to: TLENPPNIYIDP*MTTAECPNRLT Trigger: TGTCAACCGATTTGGGCATTCTGCAGTCGTCATCAATGGGTCAATGTATATATTTGGTGGATTTTCTAGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS CAA 72 bp | AAGTTGTTGGAAGCATTAATCGAAATGTCCAAGTTTTaGTTTGACTGCTCTGGGTTGGCGATGAAGTTGATG | + |
|
Preference number: 6 (lower is better) Translates to: KLLEALIEMSKF*FDCSGLAMKLM Trigger: CATCAACTTCATCGCCAACCCAGAGCAGTCAAACAAAAACTTGGACATTTCGATTAATGCTTCCAACAACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS CAA 72 bp | ATGGTTCCACCTGTTGAGCCAACTGACCACGTAATGTaGAGATTAAAGTTGTTGGAAGCATTAATCGAAATG | + |
|
Preference number: 6 (lower is better) Translates to: MVPPVEPTDHVM*RLKLLEALIEM Trigger: CATTTCGATTAATGCTTCCAACAACTTTAATCTCAACATTACGTGGTCAGTTGGCTCAACAGGTGGAACCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS GCA 72 bp | GAGGGCCCCTTGATACAGCACCTACATTCCATATACTaGTTTCTAAATTGTAATTCAGAACCATTTGAAAAG | + |
|
Preference number: 6 (lower is better) Translates to: EGPLIQHLHSIY*FLNCNSEPFEK Trigger: CTTTTCAAATGGTTCTGAATTACAATTTAGAAAGCAGTATATGGAATGTAGGTGCTGTATCAAGGGGCCCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS GCA 72 bp | GCCAAGTGTTTGAGGAGATATGGTATTCCTGTATGCTaGTGGTATAGCCATATATTGCAGAATATCCAAATA | + |
|
Preference number: 6 (lower is better) Translates to: AKCLRRYGIPVC*WYSHILQNIQI Trigger: TATTTGGATATTCTGCAATATATGGCTATACCAGCAGCATACAGGAATACCATATCTCCTCAAACACTTGGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS CAA 72 bp | GTTGAGCCAACTGACCACGTAATGTTGAGATTAAAGTaGTTGGAAGCATTAATCGAAATGTCCAAGTTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: VEPTDHVMLRLK*LEALIEMSKFL Trigger: CAAAAACTTGGACATTTCGATTAATGCTTCCAACAACTTTAATCTCAACATTACGTGGTCAGTTGGCTCAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS TCA 72 bp | AAAATAAGCATAGCTCCATTGATAAGAACAGCTGAGTaGAGGTATCTGGCAAACCCACTTTCTTTCAAAATA | + |
|
Preference number: 6 (lower is better) Translates to: KISIAPLIRTAE*RYLANPLSFKI Trigger: TATTTTGAAAGAAAGTGGGTTTGCCAGATACCTTCACTCAGCTGTTCTTATCAATGGAGCTATGCTTATTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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| CDS CAA 72 bp | GAGCCAACTGACCACGTAATGTTGAGATTAAAGTTGTaGGAAGCATTAATCGAAATGTCCAAGTTTTTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: EPTDHVMLRLKL*EALIEMSKFLF Trigger: AAACAAAAACTTGGACATTTCGATTAATGCTTCCAACAACTTTAATCTCAACATTACGTGGTCAGTTGGCTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077282.7 |
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