RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATRN (Mus musculus)

Ensembl gene IDs: ENSMUSG00000027312

Ensembl transcript IDs: ENSMUST00000028781.9

Found 370 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGCTGGGTCTGGGAGGAGGCTGGACCAACTCCTGCCCAGGGGAGATaGAACCAGGTCCCTTTCCATGTGCTGAGCAGATGCTGCCCCAAT +
Preference number: 1 (lower is better)
Translates to: SWVWEEAGPTPAQGR*NQVPFHVLSRCCPN
Trigger: ATTGGGGCAGCATCTGCTCAGCACATGGAAAGGGACCTGGTTCCATCTCCCCTGGGCAGGAGTTGGTCCAGCCTCCTCCCAGACCCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR TCA 90 bp GGACCATGCTGGAGAGCTGCTGACAGAGGGCAGCTCCTCTGCAGTTaGGATTCCCAAGAGAGGCTTCCACAAGGGACCTCAGCATCACCT +
Preference number: 1 (lower is better)
Translates to: GPCWRAADRGQLLCS*DSQERLPQGTSASP
Trigger: AGGTGATGCTGAGGTCCCTTGTGGAAGCCTCTCTTGGGAATCTCAACTGCAGAGGAGCTGCCCTCTGTCAGCAGCTCTCCAGCATGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR TCA 90 bp GGAGGCCAGGCTGATGTCTCATTCCAAAGCTGTGCTGGGAGGTTGTaGCAGGGTCAGCATTTCAGATTCCTTCAGGGAGCCAAGGCCACC +
Preference number: 1 (lower is better)
Translates to: GGQADVSFQSCAGRL*QGQHFRFLQGAKAT
Trigger: GGTGGCCTTGGCTCCCTGAAGGAATCTGAAATGCTGACCCTGTCACAACCTCCCAGCACAGCTTTGGAATGAGACATCAGCCTGGCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR TCA 90 bp TGTCCCAGTTGTCAGTGCTCTTTTCTGCTCAAGAGGCACAGGGCATaGGCAAGTGCATTCTGTGGTGCCTTGGCAAGAGCCGAGGGTTGC +
Preference number: 1 (lower is better)
Translates to: CPSCQCSFLLKRHRA*ASAFCGALARAEGC
Trigger: GCAACCCTCGGCTCTTGCCAAGGCACCACAGAATGCACTTGCTCATGCCCTGTGCCTCTTGAGCAGAAAAGAGCACTGACAACTGGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR CCA 90 bp GTTACTTTTGTTTTGTGTGTATTGGGTGTTTGTCTGTGCACCAGGTaGACCACCACAGGCACCCGAGGAGGCCAGAGGAGGGTGTCAGGT +
Preference number: 1 (lower is better)
Translates to: VTFVLCVLGVCLCTR*TTTGTRGGQRRVSG
Trigger: ACCTGACACCCTCCTCTGGCCTCCTCGGGTGCCTGTGGTGGTCCACCTGGTGCACAGACAAACACCCAATACACACAAAACAAAAGTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR GCA 90 bp TTGTCAGTGCTCTTTTCTGCTCAAGAGGCACAGGGCATGAGCAAGTaGATTCTGTGGTGCCTTGGCAAGAGCCGAGGGTTGCTCAAACGT +
Preference number: 1 (lower is better)
Translates to: LSVLFSAQEAQGMSK*ILWCLGKSRGLLKR
Trigger: ACGTTTGAGCAACCCTCGGCTCTTGCCAAGGCACCACAGAATGCACTTGCTCATGCCCTGTGCCTCTTGAGCAGAAAAGAGCACTGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR GCA 90 bp TGTAGGAAGACAGAGCCAGGTGTCCCAGTTGTCAGTGCTCTTTTCTaGTCAAGAGGCACAGGGCATGAGCAAGTGCATTCTGTGGTGCCT +
Preference number: 1 (lower is better)
Translates to: CRKTEPGVPVVSALF*SRGTGHEQVHSVVP
Trigger: AGGCACCACAGAATGCACTTGCTCATGCCCTGTGCCTCTTGAGCAGAAAAGAGCACTGACAACTGGGACACCTGGCTCTGTCTTCCTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR GCA 90 bp ATTCCCCCTGCTCTAAGCCTGAAGGGAGCTGTTGGCTGTAAGGGATaGAGGGGAGCTGGCTGTTTCTCCATTACAGGAGCAGAAATGAAC +
Preference number: 1 (lower is better)
Translates to: IPPALSLKGAVGCKG*RGAGCFSITGAEMN
Trigger: GTTCATTTCTGCTCCTGTAATGGAGAAACAGCCAGCTCCCCTGCATCCCTTACAGCCAACAGCTCCCTTCAGGCTTAGAGCAGGGGGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR GCA 90 bp TTTGCTGACAGTCTTCTTCCAGGTCAGGTCAACGGGGCAATGGGTTaGTTTCGTGTCTGTCAAACTCTGTGGACCTTTCAGAGCCCTCTC +
Preference number: 1 (lower is better)
Translates to: FADSLLPGQVNGAMG*FRVCQTLWTFQSPL
Trigger: GAGAGGGCTCTGAAAGGTCCACAGAGTTTGACAGACACGAAAGCAACCCATTGCCCCGTTGACCTGACCTGGAAGAAGACTGTCAGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR TCA 90 bp AACCTTCTGGCTTCTTGGTTCTGCTTCCAGGAAGCTATCCTAGGATaGCAGCTGTCTAAAGAGCTGGGTTTCCACCTCAGTCACTGCCCT +
Preference number: 1 (lower is better)
Translates to: NLLASWFCFQEAILG*QLSKELGFHLSHCP
Trigger: AGGGCAGTGACTGAGGTGGAAACCCAGCTCTTTAGACAGCTGTCATCCTAGGATAGCTTCCTGGAAGCAGAACCAAGAAGCCAGAAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR TCA 90 bp ATCACCTTCAGCTCTCACGGGGTCGGCACTGGTCTCCTCCACCCATaGGTAGAGCAGACCATTCCTGGACTTGTAATTAAATTATTTCCT +
Preference number: 1 (lower is better)
Translates to: ITFSSHGVGTGLLHP*VEQTIPGLVIKLFP
Trigger: AGGAAATAATTTAATTACAAGTCCAGGAATGGTCTGCTCTACTCATGGGTGGAGGAGACCAGTGCCGACCCCGTGAGAGCTGAAGGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR TCA 90 bp AGGGATGCAGGGGAGCTGGCTGTTTCTCCATTACAGGAGCAGAAATaGACGCTGTTTGCTTCTTTTGAAAGAATAAACAGTTTCCCTGGG +
Preference number: 1 (lower is better)
Translates to: RDAGELAVSPLQEQK*TLFASFERINSFPG
Trigger: CCCAGGGAAACTGTTTATTCTTTCAAAAGAAGCAAACAGCGTTCATTTCTGCTCCTGTAATGGAGAAACAGCCAGCTCCCCTGCATCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR TCA 90 bp ATTAGTTCAGCAGGCTTCACTAGTGTTTTGTGCACAGTCAGGCTCTaGGAGCAGCTTCTGTTATTGCCTTTAGTTTCTCCCTGTACTCTG +
Preference number: 1 (lower is better)
Translates to: ISSAGFTSVLCTVRL*EQLLLLPLVSPCTL
Trigger: CAGAGTACAGGGAGAAACTAAAGGCAATAACAGAAGCTGCTCTCAGAGCCTGACTGTGCACAAAACACTAGTGAAGCCTGCTGAACTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR CCA 90 bp GGGTATGGGACTAACATAGAAGCAACTTCTTTGGCCAAAGAAATTTaGTCCTTTGAGCAAAGCAGAGGGGAATTCCTTATGGACGGACAA +
Preference number: 1 (lower is better)
Translates to: GYGTNIEATSLAKEI*SFEQSRGEFLMDGQ
Trigger: TTGTCCGTCCATAAGGAATTCCCCTCTGCTTTGCTCAAAGGACCAAATTTCTTTGGCCAAAGAAGTTGCTTCTATGTTAGTCCCATACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR TCA 90 bp TGTTTCTCCATTACAGGAGCAGAAATGAACGCTGTTTGCTTCTTTTaGAAGAATAAACAGTTTCCCTGGGGGCAGGGAGAGCATAAACAG +
Preference number: 1 (lower is better)
Translates to: CFSITGAEMNAVCFF*KNKQFPWGQGEHKQ
Trigger: CTGTTTATGCTCTCCCTGCCCCCAGGGAAACTGTTTATTCTTTCAAAAGAAGCAAACAGCGTTCATTTCTGCTCCTGTAATGGAGAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR-3UTR GCA 90 bp CCTGCCCAGGGGAGATGGAACCAGGTCCCTTTCCATGTGCTGAGCAGATGCTGCCTTCTGCCCCACGCCTaGTTCCTGCCTGCAGCCTCC +
Preference number: 2 (lower is better)
Translates to: PAQGRWNQVPFHVLSRCCLLPHA*FLPAAS
Trigger: GGAGGCTGCAGGCAGGAAGCAGGCGTGGGGCAGAAG...GCAGCATCTGCTCAGCACATGGAAAGGGACCTGGTTCCATCTCCCCTGGGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR-3UTR GCA 90 bp GGTTGCTCAAACGTCAGGCCTAAAGTGACACTAGGCTGGGCTGGGGTCACTCAGCGCCTGCTTCCTGCCTaGAGCCTCCCCTGTAGACAG +
Preference number: 2 (lower is better)
Translates to: GCSNVRPKVTLGWAGVTQRLLPA*SLPCRQ
Trigger: CTGTCTACAGGGGAGGCTGCAGGCAGGAAGCAGGCG...CTGAGTGACCCCAGCCCAGCCTAGTGTCACTTTAGGCCTGACGTTTGAGCAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR-3UTR CCA 90 bp CACAAGAGTCTTGGGAGGAGTGGGTTAGTGCAGGGCTTAGAGAAAGGCTCCCTCCTCACAGCCACCAGCTaGGTCTGGGAGGAGGCTGGA +
Preference number: 2 (lower is better)
Translates to: HKSLGRSGLVQGLEKGSLLTATS*VWEEAG
Trigger: TCCAGCCTCCTCCCAGACCCAGCTGGTGGCTGTGAG...GAGGGAGCCTTTCTCTAAGCCCTGCACTAACCCACTCCTCCCAAGACTCTTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR-3UTR TCA 90 bp CACAAGAGTCTTGGGAGGAGTGGGTTAGTGCAGGGCTTAGAGAAAGGCTCCCTCATGCTGGAGAGCTGCTaGCAGAGGGCAGCTCCTCTG +
Preference number: 2 (lower is better)
Translates to: HKSLGRSGLVQGLEKGSLMLESC*QRAAPL
Trigger: CAGAGGAGCTGCCCTCTGTCAGCAGCTCTCCAGCAT...GAGGGAGCCTTTCTCTAAGCCCTGCACTAACCCACTCCTCCCAAGACTCTTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR-3UTR GCA 90 bp CCTGCCCAGGGGAGATGGAACCAGGTCCCTTTCCATGTGCTGAGCAGATGCTGCAGTGTCAGAGGACCATaGTGGAGAGCTGCTGACAGA +
Preference number: 2 (lower is better)
Translates to: PAQGRWNQVPFHVLSRCCSVRGP*WRAADR
Trigger: TCTGTCAGCAGCTCTCCAGCATGGTCCTCTGACACT...GCAGCATCTGCTCAGCACATGGAAAGGGACCTGGTTCCATCTCCCCTGGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR-3UTR CCA 90 bp ACAGGGTCAGCATTTCAGATTCCTTCAGGGAGCCAAGGCCACCCTAGGAAGAACGTCCAGGCAGGGTCCTaGGCACATAGCAGAGGGCTG +
Preference number: 2 (lower is better)
Translates to: TGSAFQIPSGSQGHPRKNVQAGS*AHSRGL
Trigger: CAGCCCTCTGCTATGTGCCCAGGACCCTGCCTGGAC...GTTCTTCCTAGGGTGGCCTTGGCTCCCTGAAGGAATCTGAAATGCTGACCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR CAA 90 bp AGGTCAGTGCGAGCAGCTGTAGGAAGACAGAGCCAGGTGTCCCAGTaGTCAGTGCTCTTTTCTGCTCAAGAGGCACAGGGCATGAGCAAG +
Preference number: 2 (lower is better)
Translates to: RSVRAAVGRQSQVSQ*SVLFSAQEAQGMSK
Trigger: CTTGCTCATGCCCTGTGCCTCTTGAGCAGAAAAGAGCACTGACAACTGGGACACCTGGCTCTGTCTTCCTACAGCTGCTCGCACTGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR-3UTR GCA 90 bp GGGACCTCAGCATCACCTTCAGCTCTCACGGGGTCGGCACTGGTCTCCTCCACCGCCATGAAAACAGCTTaGATGATCATGCACATGAGT +
Preference number: 2 (lower is better)
Translates to: GTSASPSALTGSALVSSTAMKTA*MIMHMS
Trigger: ACTCATGTGCATGATCATGCAAGCTGTTTTCATGGC...GGTGGAGGAGACCAGTGCCGACCCCGTGAGAGCTGAAGGTGATGCTGAGGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR-3UTR CCA 90 bp CACAAGAGTCTTGGGAGGAGTGGGTTAGTGCAGGGCTTAGAGAAAGGCTCCCTCAAAGTGACACTAGGCTaGGCTGGGGTCACTCAGTCC +
Preference number: 2 (lower is better)
Translates to: HKSLGRSGLVQGLEKGSLKVTLG*AGVTQS
Trigger: GGACTGAGTGACCCCAGCCCAGCCTAGTGTCACTTT...GAGGGAGCCTTTCTCTAAGCCCTGCACTAACCCACTCCTCCCAAGACTCTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR-3UTR CCA 90 bp GGTTGCTCAAACGTCAGGCCTAAAGTGACACTAGGCTGGGCTGGGGTCACTCAGAATAGCCCTCTTTGCTaGGCCTGGTGGTTCATGCTT +
Preference number: 2 (lower is better)
Translates to: GCSNVRPKVTLGWAGVTQNSPLC*AWWFML
Trigger: AAGCATGAACCACCAGGCCCAGCAAAGAGGGCTATT...CTGAGTGACCCCAGCCCAGCCTAGTGTCACTTTAGGCCTGACGTTTGAGCAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR-3UTR GCA 90 bp AAGGAGGTGACTCATTTCCTTGCCATGCACACTCTGCTGTGTAGAAAGAGGGCGCAGGGCATGAGCAAGTaGATTCTGTGGTGCCTTGGC +
Preference number: 2 (lower is better)
Translates to: KEVTHFLAMHTLLCRKRAQGMSK*ILWCLG
Trigger: GCCAAGGCACCACAGAATGCACTTGCTCATGCCCTG...CGCCCTCTTTCTACACAGCAGAGTGTGCATGGCAAGGAAATGAGTCACCTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR-3UTR CCA 90 bp GACCAAGAGCAGCCAGTGCTTTTAACCACTGAGCCATCTCTCCAGCCCCATTTTGACACTAGGCTGGGCTaGGGTCACTCAGTCCCTATT +
Preference number: 2 (lower is better)
Translates to: DQEQPVLLTTEPSLQPHFDTRLG*GHSVPI
Trigger: AATAGGGACTGAGTGACCCCAGCCCAGCCTAGTGTC...AAAATGGGGCTGGAGAGATGGCTCAGTGGTTAAAAGCACTGGCTGCTCTTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR-3UTR TCA 90 bp AAGGAGGTGACTCATTTCCTTGCCATGCACACTCTGCTGTGTAGAAAGAGGGCGGCAGGTGGATCTTTGTaGGTTCAGTCCAGCCTGATC +
Preference number: 2 (lower is better)
Translates to: KEVTHFLAMHTLLCRKRAAGGSL*VQSSLI
Trigger: GATCAGGCTGGACTGAACTCACAAAGATCCACCTGC...CGCCCTCTTTCTACACAGCAGAGTGTGCATGGCAAGGAAATGAGTCACCTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR-3UTR TCA 90 bp GACCAAGAGCAGCCAGTGCTTTTAACCACTGAGCCATCTCTCCAGCCCCATTTTCCTGCCTCTGTCTTCTaGATGCTTAGATCACAGCCG +
Preference number: 2 (lower is better)
Translates to: DQEQPVLLTTEPSLQPHFPASVF*MLRSQP
Trigger: CGGCTGTGATCTAAGCATTCAGAAGACAGAGGCAGG...AAAATGGGGCTGGAGAGATGGCTCAGTGGTTAAAAGCACTGGCTGCTCTTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR-3UTR TCA 90 bp GACCAAGAGCAGCCAGTGCTTTTAACCACTGAGCCATCTCTCCAGCCCCATTTTGCTAGGACTACACAGTaGGACCCTGTCTCCAAAAAC +
Preference number: 2 (lower is better)
Translates to: DQEQPVLLTTEPSLQPHFARTTQ*DPVSKN
Trigger: GTTTTTGGAGACAGGGTCTCACTGTGTAGTCCTAGC...AAAATGGGGCTGGAGAGATGGCTCAGTGGTTAAAAGCACTGGCTGCTCTTGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR-3UTR GCA 90 bp GTGAGGCTGCTGCATAATGCCAGAATACGGAGCACCATAAATGGGGAAATGCAAAAGTGCATTCTGTGGTaGCTTGGCAAGAGCCGAGGG +
Preference number: 2 (lower is better)
Translates to: VRLLHNARIRSTINGEMQKCILW*LGKSRG
Trigger: CCCTCGGCTCTTGCCAAGGCACCACAGAATGCACTT...TTGCATTTCCCCATTTATGGTGCTCCGTATTCTGGCATTATGCAGCAGCCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR-3UTR CCA 90 bp ACAGGGTCAGCATTTCAGATTCCTTCAGGGAGCCAAGGCCACCCTAGGAAGAACGGGTGTCAGGTTATCTaGAACTGTAGTCACAGAAGG +
Preference number: 2 (lower is better)
Translates to: TGSAFQIPSGSQGHPRKNGCQVI*NCSHRR
Trigger: CCTTCTGTGACTACAGTTCCAGATAACCTGACACCC...GTTCTTCCTAGGGTGGCCTTGGCTCCCTGAAGGAATCTGAAATGCTGACCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR-3UTR TCA 90 bp AAGGAGGTGACTCATTTCCTTGCCATGCACACTCTGCTGTGTAGAAAGAGGGCGTACACCCTGAATGTCTaGACATTCTGGACACTACAG +
Preference number: 2 (lower is better)
Translates to: KEVTHFLAMHTLLCRKRAYTLNV*TFWTLQ
Trigger: CTGTAGTGTCCAGAATGTTCAGACATTCAGGGTGTA...CGCCCTCTTTCTACACAGCAGAGTGTGCATGGCAAGGAAATGAGTCACCTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR-3UTR TCA 90 bp ACAGGGTCAGCATTTCAGATTCCTTCAGGGAGCCAAGGCCACCCTAGGAAGAACAACACTCTTGCTTCCTaGGTTTCTCTAGTATACTGC +
Preference number: 2 (lower is better)
Translates to: TGSAFQIPSGSQGHPRKNNTLAS*VSLVYC
Trigger: GCAGTATACTAGAGAAACTCAGGAAGCAAGAGTGTT...GTTCTTCCTAGGGTGGCCTTGGCTCCCTGAAGGAATCTGAAATGCTGACCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR-3UTR GCA 90 bp AGGTGTGTGAGGCTGCTGCATAATGCCAGAATACGGAGCACCATAAATGGGGAATGTCCCAGTTGTCAGTaGTCTTTTCTGCTCAAGAGG +
Preference number: 2 (lower is better)
Translates to: RCVRLLHNARIRSTINGECPSCQ*SFLLKR
Trigger: CCTCTTGAGCAGAAAAGAGCACTGACAACTGGGACA...TTCCCCATTTATGGTGCTCCGTATTCTGGCATTATGCAGCAGCCTCACACACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR-3UTR GCA 90 bp ACAGGGTCAGCATTTCAGATTCCTTCAGGGAGCCAAGGCCACCCTAGGAAGAACTTCCACCTCAGTCACTaGCCTAATGTTAGCTTAGAA +
Preference number: 2 (lower is better)
Translates to: TGSAFQIPSGSQGHPRKNFHLSH*PNVSLE
Trigger: TTCTAAGCTAACATTAGGGCAGTGACTGAGGTGGAA...GTTCTTCCTAGGGTGGCCTTGGCTCCCTGAAGGAATCTGAAATGCTGACCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR CAA 90 bp GAGCCTTCTAGCAGTGTTTTGTGCATCAGTGATTTATGGTTCAGCTaGGAACTGTCACTCCACAAGAGTCTTGGGAGGAGTGGGTTAGTG +
Preference number: 2 (lower is better)
Translates to: EPSSSVLCISDLWFS*ELSLHKSLGRSGLV
Trigger: CACTAACCCACTCCTCCCAAGACTCTTGTGGAGTGACAGTTCCAAGCTGAACCATAAATCACTGATGCACAAAACACTGCTAGAAGGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR-3UTR GCA 90 bp ACAGGGTCAGCATTTCAGATTCCTTCAGGGAGCCAAGGCCACCCTAGGAAGAACTCCCATCAACCCATGTaGTTTTCATTCTCATTAGCA +
Preference number: 2 (lower is better)
Translates to: TGSAFQIPSGSQGHPRKNSHQPM*FSFSLA
Trigger: TGCTAATGAGAATGAAAAGCACATGGGTTGATGGGA...GTTCTTCCTAGGGTGGCCTTGGCTCCCTGAAGGAATCTGAAATGCTGACCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR-3UTR TCA 90 bp CTTCATCCAATTCCCCAACGAGATCCCATCTTACACTTCAAGCTTTCCAGATATCAGCTCCTCTGCAGTTaGGATTCCCAAGAGAGGCTT +
Preference number: 2 (lower is better)
Translates to: LHPIPQRDPILHFKLSRYQLLCS*DSQERL
Trigger: AAGCCTCTCTTGGGAATCTCAACTGCAGAGGAGCTG...ATATCTGGAAAGCTTGAAGTGTAAGATGGGATCTCGTTGGGGAATTGGATGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR-3UTR GCA 90 bp CTTCATCCAATTCCCCAACGAGATCCCATCTTACACTTCAAGCTTTCCAGATATGTGCTGAGCAGATGCTaGCCCAATGCTAGGCATCAT +
Preference number: 2 (lower is better)
Translates to: LHPIPQRDPILHFKLSRYVLSRC*PNARHH
Trigger: ATGATGCCTAGCATTGGGGCAGCATCTGCTCAGCAC...ATATCTGGAAAGCTTGAAGTGTAAGATGGGATCTCGTTGGGGAATTGGATGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR-3UTR GCA 90 bp GACCAAGAGCAGCCAGTGCTTTTAACCACTGAGCCATCTCTCCAGCCCCATTTTATAGTTATGTACAAGTaGAAGAGGTCAGTGTCGTCA +
Preference number: 2 (lower is better)
Translates to: DQEQPVLLTTEPSLQPHFIVMYK*KRSVSS
Trigger: TGACGACACTGACCTCTTGCACTTGTACATAACTAT...AAAATGGGGCTGGAGAGATGGCTCAGTGGTTAAAAGCACTGGCTGCTCTTGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR CAA 90 bp CCCATCTTACACTTCAAGCTTTCCAGATATTCTGGTATTTTCCTTTaGCTGACAGTCTTCTTCCAGGTCAGGTCAACGGGGCAATGGGTT +
Preference number: 2 (lower is better)
Translates to: PILHFKLSRYSGIFL*LTVFFQVRSTGQWV
Trigger: AACCCATTGCCCCGTTGACCTGACCTGGAAGAAGACTGTCAGCAAAAGGAAAATACCAGAATATCTGGAAAGCTTGAAGTGTAAGATGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR-3UTR GCA 90 bp CTTCATCCAATTCCCCAACGAGATCCCATCTTACACTTCAAGCTTTCCAGATATGTCAGTGCTCTTTTCTaGTCAAGAGGCACAGGGCAT +
Preference number: 2 (lower is better)
Translates to: LHPIPQRDPILHFKLSRYVSALF*SRGTGH
Trigger: ATGCCCTGTGCCTCTTGAGCAGAAAAGAGCACTGAC...ATATCTGGAAAGCTTGAAGTGTAAGATGGGATCTCGTTGGGGAATTGGATGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR-3UTR TCA 90 bp CAATACTTACTCCATATTTACACAAGTGCGACAGATGCTAAATCACACATAGTATCCCTTTCCATGTGCTaGGCAGATGCTGCCCCAATG +
Preference number: 2 (lower is better)
Translates to: QYLLHIYTSATDAKSHIVSLSMC*ADAAPM
Trigger: CATTGGGGCAGCATCTGCTCAGCACATGGAAAGGGA...TACTATGTGTGATTTAGCATCTGTCGCACTTGTGTAAATATGGAGTAAGTATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR-3UTR GCA 90 bp CAATACTTACTCCATATTTACACAAGTGCGACAGATGCTAAATCACACATAGTAGTTGGCTGTAAGGGATaGAGGGGAGCTGGCTGTTTC +
Preference number: 2 (lower is better)
Translates to: QYLLHIYTSATDAKSHIVVGCKG*RGAGCF
Trigger: GAAACAGCCAGCTCCCCTGCATCCCTTACAGCCAAC...TACTATGTGTGATTTAGCATCTGTCGCACTTGTGTAAATATGGAGTAAGTATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR-3UTR CCA 90 bp CTTCATCCAATTCCCCAACGAGATCCCATCTTACACTTCAAGCTTTCCAGATATAATAAACAGTTTCCCTaGGGGCAGGGAGAGCATAAA +
Preference number: 2 (lower is better)
Translates to: LHPIPQRDPILHFKLSRYNKQFP*GQGEHK
Trigger: TTTATGCTCTCCCTGCCCCCAGGGAAACTGTTTATT...ATATCTGGAAAGCTTGAAGTGTAAGATGGGATCTCGTTGGGGAATTGGATGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR-3UTR TCA 90 bp CTTCATCCAATTCCCCAACGAGATCCCATCTTACACTTCAAGCTTTCCAGATATAGAAATTTGGTCCTTTaGGCAAAGCAGAGGGGAATT +
Preference number: 2 (lower is better)
Translates to: LHPIPQRDPILHFKLSRYRNLVL*AKQRGI
Trigger: AATTCCCCTCTGCTTTGCTCAAAGGACCAAATTTCT...ATATCTGGAAAGCTTGAAGTGTAAGATGGGATCTCGTTGGGGAATTGGATGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR-3UTR TCA 90 bp ACGAGATCCCATCTTACACTTCAAGCTTTCCAGATATTCTGGTATTTTCCTTTTCTTGGTAACTGGCTCTaGGCTGAGCTCTTAATCCCT +
Preference number: 2 (lower is better)
Translates to: TRSHLTLQAFQIFWYFPFLGNWL*AELLIP
Trigger: AGGGATTAAGAGCTCAGCTCAGAGCCAGTTACCAAG...AAAAGGAAAATACCAGAATATCTGGAAAGCTTGAAGTGTAAGATGGGATCTCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR-3UTR TCA 90 bp CTTCATCCAATTCCCCAACGAGATCCCATCTTACACTTCAAGCTTTCCAGATATGTATTTTCCTTTTGCTaGCAGTCTTCTTCCAGGTCA +
Preference number: 2 (lower is better)
Translates to: LHPIPQRDPILHFKLSRYVFSFC*QSSSRS
Trigger: TGACCTGGAAGAAGACTGTCAGCAAAAGGAAAATAC...ATATCTGGAAAGCTTGAAGTGTAAGATGGGATCTCGTTGGGGAATTGGATGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR-3UTR CCA 90 bp CAATACTTACTCCATATTTACACAAGTGCGACAGATGCTAAATCACACATAGTAAGGTCAACGGGGCAATaGGTTGCTTTCGTGTCTGTC +
Preference number: 2 (lower is better)
Translates to: QYLLHIYTSATDAKSHIVRSTGQ*VAFVSV
Trigger: GACAGACACGAAAGCAACCCATTGCCCCGTTGACCT...TACTATGTGTGATTTAGCATCTGTCGCACTTGTGTAAATATGGAGTAAGTATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR CAA 90 bp GTACATATTACTTCAGGGTATGGGACTAACATAGAAGCAACTTCTTaGGCCAAAGAAATTTGGTCCTTTGAGCAAAGCAGAGGGGAATTC +
Preference number: 2 (lower is better)
Translates to: VHITSGYGTNIEATS*AKEIWSFEQSRGEF
Trigger: GAATTCCCCTCTGCTTTGCTCAAAGGACCAAATTTCTTTGGCCAAAGAAGTTGCTTCTATGTTAGTCCCATACCCTGAAGTAATATGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR-3UTR GCA 90 bp ACGAGATCCCATCTTACACTTCAAGCTTTCCAGATATTCTGGTATTTTCCTTTTGGGCCTGGTGGTTCATaGTTTTTATCCCAGCATTTG +
Preference number: 2 (lower is better)
Translates to: TRSHLTLQAFQIFWYFPFGPGGS*FLSQHL
Trigger: CAAATGCTGGGATAAAAAGCATGAACCACCAGGCCC...AAAAGGAAAATACCAGAATATCTGGAAAGCTTGAAGTGTAAGATGGGATCTCGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR-3UTR CCA 90 bp ACGAGATCCCATCTTACACTTCAAGCTTTCCAGATATTCTGGTATTTTCCTTTTTCCCTTTCTTTCTTTTaGCCAAGAGTCCCCTGGCTT +
Preference number: 2 (lower is better)
Translates to: TRSHLTLQAFQIFWYFPFSLSFF*PRVPWL
Trigger: AAGCCAGGGGACTCTTGGCCAAAAGAAAGAAAGGGA...AAAAGGAAAATACCAGAATATCTGGAAAGCTTGAAGTGTAAGATGGGATCTCGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR-3UTR TCA 90 bp CTTCATCCAATTCCCCAACGAGATCCCATCTTACACTTCAAGCTTTCCAGATATCAGAAACAGATTAGGTaGAACTCAGATGTTAGTGTT +
Preference number: 2 (lower is better)
Translates to: LHPIPQRDPILHFKLSRYQKQIR*NSDVSV
Trigger: AACACTAACATCTGAGTTTCACCTAATCTGTTTCTG...ATATCTGGAAAGCTTGAAGTGTAAGATGGGATCTCGTTGGGGAATTGGATGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR-3UTR GCA 90 bp CAATACTTACTCCATATTTACACAAGTGCGACAGATGCTAAATCACACATAGTAAACGGGGCAATGGGTTaGTTTCGTGTCTGTCAAACT +
Preference number: 2 (lower is better)
Translates to: QYLLHIYTSATDAKSHIVNGAMG*FRVCQT
Trigger: AGTTTGACAGACACGAAAGCAACCCATTGCCCCGTT...TACTATGTGTGATTTAGCATCTGTCGCACTTGTGTAAATATGGAGTAAGTATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR-3UTR CCA 90 bp CAATACTTACTCCATATTTACACAAGTGCGACAGATGCTAAATCACACATAGTAACGGAGCACCATAAATaGGGAAATGCAATGTCCAGG +
Preference number: 2 (lower is better)
Translates to: QYLLHIYTSATDAKSHIVTEHHK*GNAMSR
Trigger: CCTGGACATTGCATTTCCCCATTTATGGTGCTCCGT...TACTATGTGTGATTTAGCATCTGTCGCACTTGTGTAAATATGGAGTAAGTATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR-3UTR GCA 90 bp CAATACTTACTCCATATTTACACAAGTGCGACAGATGCTAAATCACACATAGTAACGCAGATACTTATGTaGTGGGTTTTGGTAGAGATG +
Preference number: 2 (lower is better)
Translates to: QYLLHIYTSATDAKSHIVTQILM*WVLVEM
Trigger: CATCTCTACCAAAACCCAGCACATAAGTATCTGCGT...TACTATGTGTGATTTAGCATCTGTCGCACTTGTGTAAATATGGAGTAAGTATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR-3UTR CCA 90 bp ACGAGATCCCATCTTACACTTCAAGCTTTCCAGATATTCTGGTATTTTCCTTTTTGCATCAGTGATTTATaGTTCAGCTTGGAACTGTCA +
Preference number: 2 (lower is better)
Translates to: TRSHLTLQAFQIFWYFPFCISDL*FSLELS
Trigger: TGACAGTTCCAAGCTGAACCATAAATCACTGATGCA...AAAAGGAAAATACCAGAATATCTGGAAAGCTTGAAGTGTAAGATGGGATCTCGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR-3UTR GCA 90 bp ACGAGATCCCATCTTACACTTCAAGCTTTCCAGATATTCTGGTATTTTCCTTTTTTTGAATTTTCTTCCTaGCTCTGTCTTCTGAATGCT +
Preference number: 2 (lower is better)
Translates to: TRSHLTLQAFQIFWYFPFFEFSS*LCLLNA
Trigger: AGCATTCAGAAGACAGAGGCAGGAAGAAAATTCAAA...AAAAGGAAAATACCAGAATATCTGGAAAGCTTGAAGTGTAAGATGGGATCTCGT
37% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR CCA 72 bp CCTCCTCACAGCCACCAGCTGGGTCTGGGAGGAGGCTaGACCAACTCCTGCCCAGGGGAGATGGAACCAGGT +
Preference number: 3 (lower is better)
Translates to: PPHSHQLGLGGG*TNSCPGEMEPG
Trigger: ACCTGGTTCCATCTCCCCTGGGCAGGAGTTGGTCCAGCCTCCTCCCAGACCCAGCTGGTGGCTGTGAGGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR GCA 72 bp GCTCCCTGCAGGCAGGATGTGGAGCTCCAGAGCCTCTaGTCTGCTGGAGGCCAGGCTGATGTCTCATTCCAA +
Preference number: 3 (lower is better)
Translates to: APCRQDVELQSL*SAGGQADVSFQ
Trigger: TTGGAATGAGACATCAGCCTGGCCTCCAGCAGAGCAGAGGCTCTGGAGCTCCACATCCTGCCTGCAGGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR CCA 72 bp TGGGAGGAGGCTGGACCAACTCCTGCCCAGGGGAGATaGAACCAGGTCCCTTTCCATGTGCTGAGCAGATGC +
Preference number: 3 (lower is better)
Translates to: WEEAGPTPAQGR*NQVPFHVLSRC
Trigger: GCATCTGCTCAGCACATGGAAAGGGACCTGGTTCCATCTCCCCTGGGCAGGAGTTGGTCCAGCCTCCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR CCA 72 bp CCTCAGCATCACCTTCAGCTCTCACGGGGTCGGCACTaGTCTCCTCCACCCATGAGTAGAGCAGACCATTCC +
Preference number: 3 (lower is better)
Translates to: PQHHLQLSRGRH*SPPPMSRADHS
Trigger: GGAATGGTCTGCTCTACTCATGGGTGGAGGAGACCAGTGCCGACCCCGTGAGAGCTGAAGGTGATGCTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR-3UTR CAA 90 bp CCTGCCCAGGGGAGATGGAACCAGGTCCCTTTCCATGTGCTGAGCAGATGCTGCGCAGCTCCTCTGCAGTaGAGATTCCCAAGAGAGGCT +
Preference number: 3 (lower is better)
Translates to: PAQGRWNQVPFHVLSRCCAAPLQ*RFPREA
Trigger: AGCCTCTCTTGGGAATCTCAACTGCAGAGGAGCTGC...GCAGCATCTGCTCAGCACATGGAAAGGGACCTGGTTCCATCTCCCCTGGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR TCA 72 bp CCCAGGGGAGATGGAACCAGGTCCCTTTCCATGTGCTaGGCAGATGCTGCCCCAATGCTAGGCATCATCCCT +
Preference number: 3 (lower is better)
Translates to: PRGDGTRSLSMC*ADAAPMLGIIP
Trigger: AGGGATGATGCCTAGCATTGGGGCAGCATCTGCTCAGCACATGGAAAGGGACCTGGTTCCATCTCCCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR CCA 72 bp GGCACAGGGCATGAGCAAGTGCATTCTGTGGTGCCTTaGCAAGAGCCGAGGGTTGCTCAAACGTCAGGCCTA +
Preference number: 3 (lower is better)
Translates to: GTGHEQVHSVVP*QEPRVAQTSGL
Trigger: TAGGCCTGACGTTTGAGCAACCCTCGGCTCTTGCCAAGGCACCACAGAATGCACTTGCTCATGCCCTGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR TCA 72 bp TGGAGAGCTGCTGACAGAGGGCAGCTCCTCTGCAGTTaGGATTCCCAAGAGAGGCTTCCACAAGGGACCTCA +
Preference number: 3 (lower is better)
Translates to: WRAADRGQLLCS*DSQERLPQGTS
Trigger: TGAGGTCCCTTGTGGAAGCCTCTCTTGGGAATCTCAACTGCAGAGGAGCTGCCCTCTGTCAGCAGCTCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR GCA 72 bp ATGAGAACAGTTCATCTGAGGAGTGTCAGAGGACCATaGTGGAGAGCTGCTGACAGAGGGCAGCTCCTCTGC +
Preference number: 3 (lower is better)
Translates to: MRTVHLRSVRGP*WRAADRGQLLC
Trigger: GCAGAGGAGCTGCCCTCTGTCAGCAGCTCTCCAGCATGGTCCTCTGACACTCCTCAGATGAACTGTTCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR GCA 72 bp GCTGGCAGGCTGCAGAGTCACCTACCAGAGGCGCTCTaGTTTTCTTCATCCAATTCCCCAACGAGATCCCAT +
Preference number: 3 (lower is better)
Translates to: AGRLQSHLPEAL*FSSSNSPTRSH
Trigger: ATGGGATCTCGTTGGGGAATTGGATGAAGAAAAGCAGAGCGCCTCTGGTAGGTGACTCTGCAGCCTGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR CCA 72 bp AGAACAGTTCATCTGAGGAGTGTCAGAGGACCATGCTaGAGAGCTGCTGACAGAGGGCAGCTCCTCTGCAGT +
Preference number: 3 (lower is better)
Translates to: RTVHLRSVRGPC*RAADRGQLLCS
Trigger: ACTGCAGAGGAGCTGCCCTCTGTCAGCAGCTCTCCAGCATGGTCCTCTGACACTCCTCAGATGAACTGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR-3UTR CAA 90 bp CCTGCCCAGGGGAGATGGAACCAGGTCCCTTTCCATGTGCTGAGCAGATGCTGCAGCCATGAAAACAGCTaGCATGATCATGCACATGAG +
Preference number: 3 (lower is better)
Translates to: PAQGRWNQVPFHVLSRCCSHENS*HDHAHE
Trigger: CTCATGTGCATGATCATGCAAGCTGTTTTCATGGCT...GCAGCATCTGCTCAGCACATGGAAAGGGACCTGGTTCCATCTCCCCTGGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR TCA 72 bp TGTCAGTGCTCTTTTCTGCTCAAGAGGCACAGGGCATaGGCAAGTGCATTCTGTGGTGCCTTGGCAAGAGCC +
Preference number: 3 (lower is better)
Translates to: CQCSFLLKRHRA*ASAFCGALARA
Trigger: GGCTCTTGCCAAGGCACCACAGAATGCACTTGCTCATGCCCTGTGCCTCTTGAGCAGAAAAGAGCACTGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR GCA 72 bp TGGAACCAGGTCCCTTTCCATGTGCTGAGCAGATGCTaGCCCAATGCTAGGCATCATCCCTCTTCTAGTGTG +
Preference number: 3 (lower is better)
Translates to: WNQVPFHVLSRC*PNARHHPSSSV
Trigger: CACACTAGAAGAGGGATGATGCCTAGCATTGGGGCAGCATCTGCTCAGCACATGGAAAGGGACCTGGTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR TCA 72 bp GCTGATGTCTCATTCCAAAGCTGTGCTGGGAGGTTGTaGCAGGGTCAGCATTTCAGATTCCTTCAGGGAGCC +
Preference number: 3 (lower is better)
Translates to: ADVSFQSCAGRL*QGQHFRFLQGA
Trigger: GGCTCCCTGAAGGAATCTGAAATGCTGACCCTGTCACAACCTCCCAGCACAGCTTTGGAATGAGACATCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR CCA 72 bp CTTGGAACTGTCACTCCACAAGAGTCTTGGGAGGAGTaGGTTAGTGCAGGGCTTAGAGAAAGGCTCCCTCTT +
Preference number: 3 (lower is better)
Translates to: LGTVTPQESWEE*VSAGLRERLPL
Trigger: AAGAGGGAGCCTTTCTCTAAGCCCTGCACTAACCCACTCCTCCCAAGACTCTTGTGGAGTGACAGTTCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR CCA 72 bp CTGACAGTCTTCTTCCAGGTCAGGTCAACGGGGCAATaGGTTGCTTTCGTGTCTGTCAAACTCTGTGGACCT +
Preference number: 3 (lower is better)
Translates to: LTVFFQVRSTGQ*VAFVSVKLCGP
Trigger: AGGTCCACAGAGTTTGACAGACACGAAAGCAACCCATTGCCCCGTTGACCTGACCTGGAAGAAGACTGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR TCA 72 bp TCTTTTGGCCAAGAGTCCCCTGGCTTGTTACGGAGATaGAAGGCTAGACCACGCAGATACTTATGTGCTGGG +
Preference number: 3 (lower is better)
Translates to: SFGQESPGLLRR*KARPRRYLCAG
Trigger: CCCAGCACATAAGTATCTGCGTGGTCTAGCCTTTCATCTCCGTAACAAGCCAGGGGACTCTTGGCCAAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR GCA 72 bp AGTCTTCTTCCAGGTCAGGTCAACGGGGCAATGGGTTaGTTTCGTGTCTGTCAAACTCTGTGGACCTTTCAG +
Preference number: 3 (lower is better)
Translates to: SLLPGQVNGAMG*FRVCQTLWTFQ
Trigger: CTGAAAGGTCCACAGAGTTTGACAGACACGAAAGCAACCCATTGCCCCGTTGACCTGACCTGGAAGAAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR CCA 72 bp ACGCAGATACTTATGTGCTGGGTTTTGGTAGAGATGTaGGGAGCTCCTAACTGTATAGGGGATGAGGCTGGG +
Preference number: 3 (lower is better)
Translates to: TQILMCWVLVEM*GAPNCIGDEAG
Trigger: CCCAGCCTCATCCCCTATACAGTTAGGAGCTCCCCACATCTCTACCAAAACCCAGCACATAAGTATCTGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR TCA 72 bp GCTTCTTGGTTCTGCTTCCAGGAAGCTATCCTAGGATaGCAGCTGTCTAAAGAGCTGGGTTTCCACCTCAGT +
Preference number: 3 (lower is better)
Translates to: ASWFCFQEAILG*QLSKELGFHLS
Trigger: ACTGAGGTGGAAACCCAGCTCTTTAGACAGCTGTCATCCTAGGATAGCTTCCTGGAAGCAGAACCAAGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR CCA 72 bp CGGACAAGCCCTAGTGCAACTTCCCTTTCTTTCTTTTaGCCAAGAGTCCCCTGGCTTGTTACGGAGATGAAA +
Preference number: 3 (lower is better)
Translates to: RTSPSATSLSFF*PRVPWLVTEMK
Trigger: TTTCATCTCCGTAACAAGCCAGGGGACTCTTGGCCAAAAGAAAGAAAGGGAAGTTGCACTAGGGCTTGTCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR CCA 72 bp TACCTAATGGGCACAAGGCTACAGAACACACCAGCATaGTGTATAGTGCCTTATCAACAGATCAGGGCCTGG +
Preference number: 3 (lower is better)
Translates to: YLMGTRLQNTPA*CIVPYQQIRAW
Trigger: CCAGGCCCTGATCTGTTGATAAGGCACTATACACCATGCTGGTGTGTTCTGTAGCCTTGTGCCCATTAGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR-3UTR CAA 90 bp GTGAGGCTGCTGCATAATGCCAGAATACGGAGCACCATAAATGGGGAAATGCAACCTAACGTGGTAATCTaGTCCCTTCCCATCAACCCA +
Preference number: 3 (lower is better)
Translates to: VRLLHNARIRSTINGEMQPNVVI*SLPINP
Trigger: TGGGTTGATGGGAAGGGACAAGATTACCACGTTAGG...TTGCATTTCCCCATTTATGGTGCTCCGTATTCTGGCATTATGCAGCAGCCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR-3UTR CAA 90 bp AAGGAGGTGACTCATTTCCTTGCCATGCACACTCTGCTGTGTAGAAAGAGGGCGGATTTATGGTTCAGCTaGGAACTGTCACTCCACAAG +
Preference number: 3 (lower is better)
Translates to: KEVTHFLAMHTLLCRKRADLWFS*ELSLHK
Trigger: CTTGTGGAGTGACAGTTCCAAGCTGAACCATAAATC...CGCCCTCTTTCTACACAGCAGAGTGTGCATGGCAAGGAAATGAGTCACCTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR TCA 72 bp TGTCAGGTTATCTGGAACTGTAGTCACAGAAGGTTGTaGGCCACCATGTGGGTACTGGGAACTGAACTAGTG +
Preference number: 3 (lower is better)
Translates to: CQVIWNCSHRRL*ATMWVLGTELV
Trigger: CACTAGTTCAGTTCCCAGTACCCACATGGTGGCTCACAACCTTCTGTGACTACAGTTCCAGATAACCTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR TCA 72 bp GCAGGCTTCACTAGTGTTTTGTGCACAGTCAGGCTCTaGGAGCAGCTTCTGTTATTGCCTTTAGTTTCTCCC +
Preference number: 3 (lower is better)
Translates to: AGFTSVLCTVRL*EQLLLLPLVSP
Trigger: GGGAGAAACTAAAGGCAATAACAGAAGCTGCTCTCAGAGCCTGACTGTGCACAAAACACTAGTGAAGCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR-3UTR CAA 90 bp ACAGGGTCAGCATTTCAGATTCCTTCAGGGAGCCAAGGCCACCCTAGGAAGAACATAGAAGCAACTTCTTaGGCCAAAGAAATTTGGTCC +
Preference number: 3 (lower is better)
Translates to: TGSAFQIPSGSQGHPRKNIEATS*AKEIWS
Trigger: GGACCAAATTTCTTTGGCCAAAGAAGTTGCTTCTAT...GTTCTTCCTAGGGTGGCCTTGGCTCCCTGAAGGAATCTGAAATGCTGACCCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR CCA 72 bp GCAGTGTTTTGTGCATCAGTGATTTATGGTTCAGCTTaGAACTGTCACTCCACAAGAGTCTTGGGAGGAGTG +
Preference number: 3 (lower is better)
Translates to: AVFCASVIYGSA*NCHSTRVLGGV
Trigger: CACTCCTCCCAAGACTCTTGTGGAGTGACAGTTCCAAGCTGAACCATAAATCACTGATGCACAAAACACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR TCA 72 bp CACCCTGCTTGCTGTCTTCCTAGGTATTCTAAGAGCTaGATCATTGTTCAGTTACCTAATGGGCACAAGGCT +
Preference number: 3 (lower is better)
Translates to: HPACCLPRYSKS*IIVQLPNGHKA
Trigger: AGCCTTGTGCCCATTAGGTAACTGAACAATGATTCAGCTCTTAGAATACCTAGGAAGACAGCAAGCAGGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR CCA 72 bp CAGGCTATTCTTGAGTTACTTTTGTTTTGTGTGTATTaGGTGTTTGTCTGTGCACCAGGTGGACCACCACAG +
Preference number: 3 (lower is better)
Translates to: QAILELLLFCVY*VFVCAPGGPPQ
Trigger: CTGTGGTGGTCCACCTGGTGCACAGACAAACACCCAATACACACAAAACAAAAGTAACTCAAGAATAGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR TCA 72 bp TTAGAGAGCCCCTTTGCAAAGTCTGACGTTCATGGGTaGCAGTCTTTGAATGTGAAGAGTAACAGAACACCT +
Preference number: 3 (lower is better)
Translates to: LESPFAKSDVHG*QSLNVKSNRTP
Trigger: AGGTGTTCTGTTACTCTTCACATTCAAAGACTGTCACCCATGAACGTCAGACTTTGCAAAGGGGCTCTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR CCA 72 bp CAAGAGGTCAGTGTCGTCATGACTATTTTATATACATaGTCTCTCGTGACACAGTTACTGGGTCACAACTCC +
Preference number: 3 (lower is better)
Translates to: QEVSVVMTILYT*SLVTQLLGHNS
Trigger: GGAGTTGTGACCCAGTAACTGTGTCACGAGAGACCATGTATATAAAATAGTCATGACGACACTGACCTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR-3UTR CAA 90 bp CTACAGTATAGTTATGTACAAGTGCAAGAGGTCAGTGTCGTCATGACTATTTTAAGCCAGGTGTCCCAGTaGTCAGTGCTCTTTTCTGCT +
Preference number: 3 (lower is better)
Translates to: LQYSYVQVQEVSVVMTILSQVSQ*SVLFSA
Trigger: AGCAGAAAAGAGCACTGACAACTGGGACACCTGGCT...TAAAATAGTCATGACGACACTGACCTCTTGCACTTGTACATAACTATACTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR-3UTR CAA 90 bp CTACAGTATAGTTATGTACAAGTGCAAGAGGTCAGTGTCGTCATGACTATTTTAGCAAAGAGTCGTGTTTaGAGAGGTGAGCCTTCTAGC +
Preference number: 3 (lower is better)
Translates to: LQYSYVQVQEVSVVMTILAKSRV*RGEPSS
Trigger: GCTAGAAGGCTCACCTCTCAAAACACGACTCTTTGC...TAAAATAGTCATGACGACACTGACCTCTTGCACTTGTACATAACTATACTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR TCA 72 bp TTCTGCTCTTTAATAGTGATGCAAAGAGTCGTGTTTTaGGAGGTGAGCCTTCTAGCAGTGTTTTGTGCATCA +
Preference number: 3 (lower is better)
Translates to: FCSLIVMQRVVF*EVSLLAVFCAS
Trigger: TGATGCACAAAACACTGCTAGAAGGCTCACCTCTCAAAACACGACTCTTTGCATCACTATTAAAGAGCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR CCA 72 bp ACTAACATAGAAGCAACTTCTTTGGCCAAAGAAATTTaGTCCTTTGAGCAAAGCAGAGGGGAATTCCTTATG +
Preference number: 3 (lower is better)
Translates to: TNIEATSLAKEI*SFEQSRGEFLM
Trigger: CATAAGGAATTCCCCTCTGCTTTGCTCAAAGGACCAAATTTCTTTGGCCAAAGAAGTTGCTTCTATGTTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR-3UTR CAA 90 bp ACGAGATCCCATCTTACACTTCAAGCTTTCCAGATATTCTGGTATTTTCCTTTTCTAACTCCATTGACCTaGACATTTAGAATAGCCCTC +
Preference number: 3 (lower is better)
Translates to: TRSHLTLQAFQIFWYFPFLTPLT*TFRIAL
Trigger: GAGGGCTATTCTAAATGTCAAGGTCAATGGAGTTAG...AAAAGGAAAATACCAGAATATCTGGAAAGCTTGAAGTGTAAGATGGGATCTCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR-3UTR CAA 90 bp CTACAGTATAGTTATGTACAAGTGCAAGAGGTCAGTGTCGTCATGACTATTTTAAAGAAATTTGGTCCTTaGAGCAAAGCAGAGGGGAAT +
Preference number: 3 (lower is better)
Translates to: LQYSYVQVQEVSVVMTILKKFGP*SKAEGN
Trigger: ATTCCCCTCTGCTTTGCTCAAAGGACCAAATTTCTT...TAAAATAGTCATGACGACACTGACCTCTTGCACTTGTACATAACTATACTGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR TCA 72 bp TATGATACTCTTCTGTTTATGTACACCCTGAATGTCTaGACATTCTGGACACTACAGTATAGTTATGTACAA +
Preference number: 3 (lower is better)
Translates to: YDTLLFMYTLNV*TFWTLQYSYVQ
Trigger: TTGTACATAACTATACTGTAGTGTCCAGAATGTTCAGACATTCAGGGTGTACATAAACAGAAGAGTATCATA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR GCA 90 bp CCTGCCCAGGGGAGATGGAACCAGGTCCCTTTCCATGTGCTGAGCAGATGCTGCGTGCAGGGTCGGTGCTaGCTGCCCTTCCTGCCCGCA +
Preference number: 4 (lower is better)
Translates to: PAQGRWNQVPFHVLSRCCVQGRC*LPFLPA
Trigger: TGCGGGCAGGAAGGGCAGGCAGCACCGACCCTGCAC...GCAGCATCTGCTCAGCACATGGAAAGGGACCTGGTTCCATCTCCCCTGGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR GCA 90 bp GGTTGCTCAAACGTCAGGCCTAAAGTGACACTAGGCTGGGCTGGGGTCACTCAGAGGGTCGGTGCTGCCTaGCCTTCCTGCCCGCAGGCG +
Preference number: 4 (lower is better)
Translates to: GCSNVRPKVTLGWAGVTQRVGAA*PSCPQA
Trigger: CGCCTGCGGGCAGGAAGGGCAGGCAGCACCGACCCT...CTGAGTGACCCCAGCCCAGCCTAGTGTCACTTTAGGCCTGACGTTTGAGCAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR TCA 90 bp CCTGCCCAGGGGAGATGGAACCAGGTCCCTTTCCATGTGCTGAGCAGATGCTGCAGGGCGATGCACTCTTaGTTCCGGGGCTCCCACTGG +
Preference number: 4 (lower is better)
Translates to: PAQGRWNQVPFHVLSRCCRAMHS*FRGSHW
Trigger: CCAGTGGGAGCCCCGGAATCAAGAGTGCATCGCCCT...GCAGCATCTGCTCAGCACATGGAAAGGGACCTGGTTCCATCTCCCCTGGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR TCA 90 bp CCTGCCCAGGGGAGATGGAACCAGGTCCCTTTCCATGTGCTGAGCAGATGCTGCGGCCACAGCGAGACCTaGCTGACCAGGAGGAGGGAT +
Preference number: 4 (lower is better)
Translates to: PAQGRWNQVPFHVLSRCCGHSET*LTRRRD
Trigger: ATCCCTCCTCCTGGTCAGTCAGGTCTCGCTGTGGCC...GCAGCATCTGCTCAGCACATGGAAAGGGACCTGGTTCCATCTCCCCTGGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR GCA 90 bp CACAAGAGTCTTGGGAGGAGTGGGTTAGTGCAGGGCTTAGAGAAAGGCTCCCTCGCGGTGCAGGGTCGGTaGTGCCTGCCCTTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: HKSLGRSGLVQGLEKGSLAVQGR*CLPFLP
Trigger: GGGCAGGAAGGGCAGGCAGCACCGACCCTGCACCGC...GAGGGAGCCTTTCTCTAAGCCCTGCACTAACCCACTCCTCCCAAGACTCTTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR GCA 90 bp GGGACCTCAGCATCACCTTCAGCTCTCACGGGGTCGGCACTGGTCTCCTCCACCCATGGTGTCCGGCACTaGTTGGCACTGTGGTTTGCA +
Preference number: 4 (lower is better)
Translates to: GTSASPSALTGSALVSSTHGVRH*LALWFA
Trigger: TGCAAACCACAGTGCCAAGCAGTGCCGGACACCATG...GGTGGAGGAGACCAGTGCCGACCCCGTGAGAGCTGAAGGTGATGCTGAGGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR GCA 90 bp CCTGCCCAGGGGAGATGGAACCAGGTCCCTTTCCATGTGCTGAGCAGATGCTGCAGGTCTCGCAGTGCTTaGCCGTGGTCAGGTCCTCAC +
Preference number: 4 (lower is better)
Translates to: PAQGRWNQVPFHVLSRCCRSRSA*PWSGPH
Trigger: GTGAGGACCTGACCACGGGCAAGCACTGCGAGACCT...GCAGCATCTGCTCAGCACATGGAAAGGGACCTGGTTCCATCTCCCCTGGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR GCA 90 bp GGGACCTCAGCATCACCTTCAGCTCTCACGGGGTCGGCACTGGTCTCCTCCACCTGTGCAGGCGGCTGCTaGTTCCGGTTTCTTACAGCT +
Preference number: 4 (lower is better)
Translates to: GTSASPSALTGSALVSSTCAGGC*FRFLTA
Trigger: AGCTGTAAGAAACCGGAAGCAGCAGCCGCCTGCACA...GGTGGAGGAGACCAGTGCCGACCCCGTGAGAGCTGAAGGTGATGCTGAGGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR GCA 90 bp AAGGAGGTGACTCATTTCCTTGCCATGCACACTCTGCTGTGTAGAAAGAGGGCGAGGCCCCTGTCGCGGTaGAGGGTCGGTGCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: KEVTHFLAMHTLLCRKRARPLSR*RVGAAC
Trigger: GCAGGCAGCACCGACCCTGCACCGCGACAGGGGCCT...CGCCCTCTTTCTACACAGCAGAGTGTGCATGGCAAGGAAATGAGTCACCTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CCA 90 bp GGGACCTCAGCATCACCTTCAGCTCTCACGGGGTCGGCACTGGTCTCCTCCACCAGAAGCCAGCATCACTaGGCTCAGATGGCATCCACT +
Preference number: 4 (lower is better)
Translates to: GTSASPSALTGSALVSSTRSQHH*AQMAST
Trigger: AGTGGATGCCATCTGAGCCCAGTGATGCTGGCTTCT...GGTGGAGGAGACCAGTGCCGACCCCGTGAGAGCTGAAGGTGATGCTGAGGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CCA 90 bp GGGACCTCAGCATCACCTTCAGCTCTCACGGGGTCGGCACTGGTCTCCTCCACCCACTGCTTGGCACTGTaGTTTGCAGGCCTTTCACAG +
Preference number: 4 (lower is better)
Translates to: GTSASPSALTGSALVSSTHCLAL*FAGLSQ
Trigger: CTGTGAAAGGCCTGCAAACCACAGTGCCAAGCAGTG...GGTGGAGGAGACCAGTGCCGACCCCGTGAGAGCTGAAGGTGATGCTGAGGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CCA 90 bp GGTTGCTCAAACGTCAGGCCTAAAGTGACACTAGGCTGGGCTGGGGTCACTCAGTGTCCGCAGGGCACATaGTGTCCGGCACTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: GCSNVRPKVTLGWAGVTQCPQGT*CPALLG
Trigger: GCCAAGCAGTGCCGGACACCATGTGCCCTGCGGACA...CTGAGTGACCCCAGCCCAGCCTAGTGTCACTTTAGGCCTGACGTTTGAGCAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR TCA 90 bp CACAAGAGTCTTGGGAGGAGTGGGTTAGTGCAGGGCTTAGAGAAAGGCTCCCTCCCAGGACCCTGCCAGTaGGGAAAGCAGGAGCACCCT +
Preference number: 4 (lower is better)
Translates to: HKSLGRSGLVQGLEKGSLPGPCQ*GKQEHP
Trigger: AGGGTGCTCCTGCTTTCCTCACTGGCAGGGTCCTGG...GAGGGAGCCTTTCTCTAAGCCCTGCACTAACCCACTCCTCCCAAGACTCTTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR GCA 90 bp CCTGCCCAGGGGAGATGGAACCAGGTCCCTTTCCATGTGCTGAGCAGATGCTGCCTCTCTCCGCCTGGATaGCCAACAGCTCTGCTTGAT +
Preference number: 4 (lower is better)
Translates to: PAQGRWNQVPFHVLSRCCLSPPG*PTALLD
Trigger: ATCAAGCAGAGCTGTTGGGCATCCAGGCGGAGAGAG...GCAGCATCTGCTCAGCACATGGAAAGGGACCTGGTTCCATCTCCCCTGGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CCA 90 bp GACCAAGAGCAGCCAGTGCTTTTAACCACTGAGCCATCTCTCCAGCCCCATTTTGTGGGGCAGACGCACTaGCCGGTGCCAGGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: DQEQPVLLTTEPSLQPHFVGQTH*PVPGLQ
Trigger: CTGCAACCCTGGCACCGGCCAGTGCGTCTGCCCCAC...AAAATGGGGCTGGAGAGATGGCTCAGTGGTTAAAAGCACTGGCTGCTCTTGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CCA 90 bp GGGACCTCAGCATCACCTTCAGCTCTCACGGGGTCGGCACTGGTCTCCTCCACCTGGCACCGTGGCTCATaGAAGTGTCATTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: GTSASPSALTGSALVSSTWHRGS*KCHCVC
Trigger: ACACACACAATGACACTTCCATGAGCCACGGTGCCA...GGTGGAGGAGACCAGTGCCGACCCCGTGAGAGCTGAAGGTGATGCTGAGGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CCA 90 bp GGTTGCTCAAACGTCAGGCCTAAAGTGACACTAGGCTGGGCTGGGGTCACTCAGTGTCCACCAGGGCACTaGCCACAGCGAGACCTGACT +
Preference number: 4 (lower is better)
Translates to: GCSNVRPKVTLGWAGVTQCPPGH*PQRDLT
Trigger: AGTCAGGTCTCGCTGTGGCCAGTGCCCTGGTGGACA...CTGAGTGACCCCAGCCCAGCCTAGTGTCACTTTAGGCCTGACGTTTGAGCAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR TCA 90 bp CCTGCCCAGGGGAGATGGAACCAGGTCCCTTTCCATGTGCTGAGCAGATGCTGCAGGTCTGGGAAGCACTaGCCATCGGTCACAAGCAAT +
Preference number: 4 (lower is better)
Translates to: PAQGRWNQVPFHVLSRCCRSGKH*PSVTSN
Trigger: ATTGCTTGTGACCGATGGTCAGTGCTTCCCAGACCT...GCAGCATCTGCTCAGCACATGGAAAGGGACCTGGTTCCATCTCCCCTGGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR TCA 90 bp CCTGCCCAGGGGAGATGGAACCAGGTCCCTTTCCATGTGCTGAGCAGATGCTGCTTCACAGGGACACAGTaGTCATTGCACCAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: PAQGRWNQVPFHVLSRCCFTGTQ*SLHQWQ
Trigger: CTGCCACTGGTGCAATGATCACTGTGTCCCTGTGAA...GCAGCATCTGCTCAGCACATGGAAAGGGACCTGGTTCCATCTCCCCTGGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR GCA 90 bp GGGACCTCAGCATCACCTTCAGCTCTCACGGGGTCGGCACTGGTCTCCTCCACCTTTCAGGTGGGCAGCTaGTCATCGTATACCATTCCA +
Preference number: 4 (lower is better)
Translates to: GTSASPSALTGSALVSSTFQVGS*SSYTIP
Trigger: TGGAATGGTATACGATGAGCAGCTGCCCACCTGAAA...GGTGGAGGAGACCAGTGCCGACCCCGTGAGAGCTGAAGGTGATGCTGAGGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CCA 90 bp GGGACCTCAGCATCACCTTCAGCTCTCACGGGGTCGGCACTGGTCTCCTCCACCGTTCAGAAGGGGCTGTaGATACACATTTCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: GTSASPSALTGSALVSSTVQKGL*IHISCR
Trigger: TCTGCAGGAAATGTGTATCCACAGCCCCTTCTGAAC...GGTGGAGGAGACCAGTGCCGACCCCGTGAGAGCTGAAGGTGATGCTGAGGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CCA 90 bp GGGACCTCAGCATCACCTTCAGCTCTCACGGGGTCGGCACTGGTCTCCTCCACCGTTGCACTGGCAAGCTaGACAGTGAATGAAAGACCA +
Preference number: 4 (lower is better)
Translates to: GTSASPSALTGSALVSSTVALAS*TVNERP
Trigger: TGGTCTTTCATTCACTGTCCAGCTTGCCAGTGCAAC...GGTGGAGGAGACCAGTGCCGACCCCGTGAGAGCTGAAGGTGATGCTGAGGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR TCA 90 bp CACAAGAGTCTTGGGAGGAGTGGGTTAGTGCAGGGCTTAGAGAAAGGCTCCCTCAGCTGGCACAGGAATTaGGCATCCAGGACCCTGCCA +
Preference number: 4 (lower is better)
Translates to: HKSLGRSGLVQGLEKGSLSWHRN*ASRTLP
Trigger: TGGCAGGGTCCTGGATGCTCAATTCCTGTGCCAGCT...GAGGGAGCCTTTCTCTAAGCCCTGCACTAACCCACTCCTCCCAAGACTCTTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR GCA 90 bp CACAAGAGTCTTGGGAGGAGTGGGTTAGTGCAGGGCTTAGAGAAAGGCTCCCTCCAACCACAGCCTGGCTaGTCCAAGCAATGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: HKSLGRSGLVQGLEKGSLQPQPG*SKQWLQ
Trigger: CTGCAGCCATTGCTTGGAGCAGCCAGGCTGTGGTTG...GAGGGAGCCTTTCTCTAAGCCCTGCACTAACCCACTCCTCCCAAGACTCTTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR GCA 90 bp GGGACCTCAGCATCACCTTCAGCTCTCACGGGGTCGGCACTGGTCTCCTCCACCGAATACAGAGAGGACTaGGGCTTTGTTACCAAAGCA +
Preference number: 4 (lower is better)
Translates to: GTSASPSALTGSALVSSTEYRED*GFVTKA
Trigger: TGCTTTGGTAACAAAGCCGCAGTCCTCTCTGTATTC...GGTGGAGGAGACCAGTGCCGACCCCGTGAGAGCTGAAGGTGATGCTGAGGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CCA 90 bp GGGACCTCAGCATCACCTTCAGCTCTCACGGGGTCGGCACTGGTCTCCTCCACCCACAGCTCCTGCAGCTaGTTTTCTTATTGCAGTAGT +
Preference number: 4 (lower is better)
Translates to: GTSASPSALTGSALVSSTHSSCS*FSYCSS
Trigger: ACTACTGCAATAAGAAAACCAGCTGCAGGAGCTGTG...GGTGGAGGAGACCAGTGCCGACCCCGTGAGAGCTGAAGGTGATGCTGAGGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CCA 90 bp CCTGCCCAGGGGAGATGGAACCAGGTCCCTTTCCATGTGCTGAGCAGATGCTGCTACCATTCCATACACTaGCCAAAAGGGAAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: PAQGRWNQVPFHVLSRCCYHSIH*PKGKEA
Trigger: GGCCTCCTTCCCTTTTGGCCAGTGTATGGAATGGTA...GCAGCATCTGCTCAGCACATGGAAAGGGACCTGGTTCCATCTCCCCTGGGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CCA 90 bp CACAAGAGTCTTGGGAGGAGTGGGTTAGTGCAGGGCTTAGAGAAAGGCTCCCTCAAGCAAAGGGGCGGCTaGCCATCTGTTGCATCTCCC +
Preference number: 4 (lower is better)
Translates to: HKSLGRSGLVQGLEKGSLKQRGG*PSVASP
Trigger: GGGAGATGCAACAGATGGCCAGCCGCCCCTTTGCTT...GAGGGAGCCTTTCTCTAAGCCCTGCACTAACCCACTCCTCCCAAGACTCTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR CAA 72 bp CGAGCAGCTGTAGGAAGACAGAGCCAGGTGTCCCAGTaGTCAGTGCTCTTTTCTGCTCAAGAGGCACAGGGC +
Preference number: 4 (lower is better)
Translates to: RAAVGRQSQVSQ*SVLFSAQEAQG
Trigger: GCCCTGTGCCTCTTGAGCAGAAAAGAGCACTGACAACTGGGACACCTGGCTCTGTCTTCCTACAGCTGCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR TCA 90 bp TGTCCCTTCCCATCAACCCATGTGCTTTTCATTCTCATTAGCATTCCCCACCTCTGCAGCGGCCGCCGTTaGCACACGGCCGGTCACATT +
Preference number: 4 (lower is better)
Translates to: CPFPSTHVLFILISIPHLCSGRR*HTAGHI
Trigger: AATGTGACCGGCCGTGTGTCAACGGCGGCCGCTGCA...GAGGTGGGGAATGCTAATGAGAATGAAAAGCACATGGGTTGATGGGAAGGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR TCA 90 bp GACCAAGAGCAGCCAGTGCTTTTAACCACTGAGCCATCTCTCCAGCCCCATTTTAAGAGCCAGTTAGTCTaGAGCGGCCCCCGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: DQEQPVLLTTEPSLQPHFKSQLV*SGPRSA
Trigger: AGCACTGCGGGGGCCGCTTCAGACTAACTGGCTCTT...AAAATGGGGCTGGAGAGATGGCTCAGTGGTTAAAAGCACTGGCTGCTCTTGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR GCA 90 bp GGTTGCTCAAACGTCAGGCCTAAAGTGACACTAGGCTGGGCTGGGGTCACTCAGGACCACACGGCCAGATaGCAGTGTAACAATGTGTGC +
Preference number: 4 (lower is better)
Translates to: GCSNVRPKVTLGWAGVTQDHTAR*QCNNVC
Trigger: GCACACATTGTTACACTGGCATCTGGCCGTGTGGTC...CTGAGTGACCCCAGCCCAGCCTAGTGTCACTTTAGGCCTGACGTTTGAGCAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CCA 90 bp GACCAAGAGCAGCCAGTGCTTTTAACCACTGAGCCATCTCTCCAGCCCCATTTTGTGTCCGGCACTGCTTaGCACTGTGGTTTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: DQEQPVLLTTEPSLQPHFVSGTA*HCGLQA
Trigger: GGCCTGCAAACCACAGTGCCAAGCAGTGCCGGACAC...AAAATGGGGCTGGAGAGATGGCTCAGTGGTTAAAAGCACTGGCTGCTCTTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CCA 90 bp GGTTGCTCAAACGTCAGGCCTAAAGTGACACTAGGCTGGGCTGGGGTCACTCAGAGCACTTGCCGGTGTTaGTGTTGCACAGTGATGCGT +
Preference number: 4 (lower is better)
Translates to: GCSNVRPKVTLGWAGVTQSTCRC*CCTVMR
Trigger: ACGCATCACTGTGCAACACCAACACCGGCAAGTGCT...CTGAGTGACCCCAGCCCAGCCTAGTGTCACTTTAGGCCTGACGTTTGAGCAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR TCA 90 bp AAGGAGGTGACTCATTTCCTTGCCATGCACACTCTGCTGTGTAGAAAGAGGGCGGGCACTCGTCCCCCTTaGCACCTTTGGTGGTACAGA +
Preference number: 4 (lower is better)
Translates to: KEVTHFLAMHTLLCRKRAGTRPP*HLWWYR
Trigger: TCTGTACCACCAAAGGTGTCAAGGGGGACGAGTGCC...CGCCCTCTTTCTACACAGCAGAGTGTGCATGGCAAGGAAATGAGTCACCTCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CCA 90 bp CTTCATCCAATTCCCCAACGAGATCCCATCTTACACTTCAAGCTTTCCAGATATCGGCCCCCGCAGTGCTaGCATTGCTCGCCCACCCAG +
Preference number: 4 (lower is better)
Translates to: LHPIPQRDPILHFKLSRYRPPQC*HCSPTQ
Trigger: CTGGGTGGGCGAGCAATGCCAGCACTGCGGGGGCCG...ATATCTGGAAAGCTTGAAGTGTAAGATGGGATCTCGTTGGGGAATTGGATGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CCA 90 bp AGGTGTGTGAGGCTGCTGCATAATGCCAGAATACGGAGCACCATAAATGGGGAATTCCGGGGCTCCCACTaGCAGTTCTGGTCTAGGGCA +
Preference number: 4 (lower is better)
Translates to: RCVRLLHNARIRSTINGEFRGSH*QFWSRA
Trigger: TGCCCTAGACCAGAACTGCCAGTGGGAGCCCCGGAA...TTCCCCATTTATGGTGCTCCGTATTCTGGCATTATGCAGCAGCCTCACACACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CCA 90 bp CACAAGAGTCTTGGGAGGAGTGGGTTAGTGCAGGGCTTAGAGAAAGGCTCCCTCTCTACCTCACATAGCTaGCACTCGTCCCCCTTGACA +
Preference number: 4 (lower is better)
Translates to: HKSLGRSGLVQGLEKGSLSTSHS*HSSPLT
Trigger: TGTCAAGGGGGACGAGTGCCAGCTATGTGAGGTAGA...GAGGGAGCCTTTCTCTAAGCCCTGCACTAACCCACTCCTCCCAAGACTCTTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR TCA 90 bp GGTTGCTCAAACGTCAGGCCTAAAGTGACACTAGGCTGGGCTGGGGTCACTCAGACCAGTAAGACACATTaGTCTTCCGAAGACCAACCC +
Preference number: 4 (lower is better)
Translates to: GCSNVRPKVTLGWAGVTQTSKTH*SSEDQP
Trigger: GGGTTGGTCTTCGGAAGATCAATGTGTCTTACTGGT...CTGAGTGACCCCAGCCCAGCCTAGTGTCACTTTAGGCCTGACGTTTGAGCAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR TCA 90 bp AAGGAGGTGACTCATTTCCTTGCCATGCACACTCTGCTGTGTAGAAAGAGGGCGCCCAACAGCTCTGCTTaGTCTTCCAGACCACTGCAG +
Preference number: 4 (lower is better)
Translates to: KEVTHFLAMHTLLCRKRAPNSSA*SSRPLQ
Trigger: CTGCAGTGGTCTGGAAGATCAAGCAGAGCTGTTGGG...CGCCCTCTTTCTACACAGCAGAGTGTGCATGGCAAGGAAATGAGTCACCTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR GCA 90 bp AGGTGTGTGAGGCTGCTGCATAATGCCAGAATACGGAGCACCATAAATGGGGAATTTCCGGCAGGGCGATaGACTCTTGATTCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: RCVRLLHNARIRSTINGEFPAGR*TLDSGA
Trigger: AGCCCCGGAATCAAGAGTGCATCGCCCTGCCGGAAA...TTCCCCATTTATGGTGCTCCGTATTCTGGCATTATGCAGCAGCCTCACACACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR GCA 90 bp GGTTGCTCAAACGTCAGGCCTAAAGTGACACTAGGCTGGGCTGGGGTCACTCAGCCAAATGCCAGCCATTaGCACAGATATTTTCCGGCA +
Preference number: 4 (lower is better)
Translates to: GCSNVRPKVTLGWAGVTQPNASH*HRYFPA
Trigger: TGCCGGAAAATATCTGTGGCAATGGCTGGCATTTGG...CTGAGTGACCCCAGCCCAGCCTAGTGTCACTTTAGGCCTGACGTTTGAGCAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR GCA 90 bp CACAAGAGTCTTGGGAGGAGTGGGTTAGTGCAGGGCTTAGAGAAAGGCTCCCTCTGTCCTCTAGACACATaGTGGAGTTCAGAAGGGGCT +
Preference number: 4 (lower is better)
Translates to: HKSLGRSGLVQGLEKGSLCPLDT*WSSEGA
Trigger: AGCCCCTTCTGAACTCCAGCATGTGTCTAGAGGACA...GAGGGAGCCTTTCTCTAAGCCCTGCACTAACCCACTCCTCCCAAGACTCTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR GCA 90 bp TGTCCCTTCCCATCAACCCATGTGCTTTTCATTCTCATTAGCATTCCCCACCTCATGCAGGTCTCGCAGTaGTTGCCCGTGGTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: CPFPSTHVLFILISIPHLMQVSQ*LPVVRS
Trigger: GGACCTGACCACGGGCAAGCACTGCGAGACCTGCAT...GAGGTGGGGAATGCTAATGAGAATGAAAAGCACATGGGTTGATGGGAAGGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR GCA 90 bp AAGGAGGTGACTCATTTCCTTGCCATGCACACTCTGCTGTGTAGAAAGAGGGCGTGCCGGTGTTGGTGTTaGACAGTGATGCGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: KEVTHFLAMHTLLCRKRACRCWC*TVMRAH
Trigger: ATGGGCACGCATCACTGTGCAACACCAACACCGGCA...CGCCCTCTTTCTACACAGCAGAGTGTGCATGGCAAGGAAATGAGTCACCTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR GCA 90 bp GACCAAGAGCAGCCAGTGCTTTTAACCACTGAGCCATCTCTCCAGCCCCATTTTGATCTTCCAGACCACTaGAGCCACCAGAAGCAGCGA +
Preference number: 4 (lower is better)
Translates to: DQEQPVLLTTEPSLQPHFDLPDH*SHQKQR
Trigger: TCGCTGCTTCTGGTGGCTGCAGTGGTCTGGAAGATC...AAAATGGGGCTGGAGAGATGGCTCAGTGGTTAAAAGCACTGGCTGCTCTTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR GCA 90 bp GACCAAGAGCAGCCAGTGCTTTTAACCACTGAGCCATCTCTCCAGCCCCATTTTATCTCCCGAAGAAGTTaGTCTCTCCGCCTGGATGCC +
Preference number: 4 (lower is better)
Translates to: DQEQPVLLTTEPSLQPHFISRRS*SLRLDA
Trigger: GGCATCCAGGCGGAGAGAGCAACTTCTTCGGGAGAT...AAAATGGGGCTGGAGAGATGGCTCAGTGGTTAAAAGCACTGGCTGCTCTTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CCA 90 bp AAGGAGGTGACTCATTTCCTTGCCATGCACACTCTGCTGTGTAGAAAGAGGGCGGATGGAGCTCAGGTCTaGGAAGCACTGACCATCGGT +
Preference number: 4 (lower is better)
Translates to: KEVTHFLAMHTLLCRKRADGAQV*EALTIG
Trigger: ACCGATGGTCAGTGCTTCCCAGACCTGAGCTCCATC...CGCCCTCTTTCTACACAGCAGAGTGTGCATGGCAAGGAAATGAGTCACCTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CCA 90 bp AAGGAGGTGACTCATTTCCTTGCCATGCACACTCTGCTGTGTAGAAAGAGGGCGACACCAACCACAGCCTaGCTGCTCCAAGCAATGGCT +
Preference number: 4 (lower is better)
Translates to: KEVTHFLAMHTLLCRKRATPTTA*LLQAMA
Trigger: AGCCATTGCTTGGAGCAGCCAGGCTGTGGTTGGTGT...CGCCCTCTTTCTACACAGCAGAGTGTGCATGGCAAGGAAATGAGTCACCTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR TCA 90 bp AAGGAGGTGACTCATTTCCTTGCCATGCACACTCTGCTGTGTAGAAAGAGGGCGCAGCAGTGCATAACCTaGAGTGACAGTGACCTCAGG +
Preference number: 4 (lower is better)
Translates to: KEVTHFLAMHTLLCRKRAQQCIT*SDSDLR
Trigger: CCTGAGGTCACTGTCACTTCAGGTTATGCACTGCTG...CGCCCTCTTTCTACACAGCAGAGTGTGCATGGCAAGGAAATGAGTCACCTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR TCA 90 bp ACAGGGTCAGCATTTCAGATTCCTTCAGGGAGCCAAGGCCACCCTAGGAAGAACACACTCTCCTCGGCCTaGGCAATTATTCGGACACAT +
Preference number: 4 (lower is better)
Translates to: TGSAFQIPSGSQGHPRKNTLSSA*AIIRTH
Trigger: ATGTGTCCGAATAATTGCTCAGGCCGAGGAGAGTGT...GTTCTTCCTAGGGTGGCCTTGGCTCCCTGAAGGAATCTGAAATGCTGACCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR TCA 90 bp GTGAGGCTGCTGCATAATGCCAGAATACGGAGCACCATAAATGGGGAAATGCAAACAGCGAGACCTGACTaGCCAGGAGGAGGGATTCCT +
Preference number: 4 (lower is better)
Translates to: VRLLHNARIRSTINGEMQTARPD*PGGGIP
Trigger: AGGAATCCCTCCTCCTGGTCAGTCAGGTCTCGCTGT...TTGCATTTCCCCATTTATGGTGCTCCGTATTCTGGCATTATGCAGCAGCCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR GCA 90 bp AAGGAGGTGACTCATTTCCTTGCCATGCACACTCTGCTGTGTAGAAAGAGGGCGGATACCAGGTCCTGCTaGCACACAAGCAGCTTCACT +
Preference number: 4 (lower is better)
Translates to: KEVTHFLAMHTLLCRKRADTRSC*HTSSFT
Trigger: AGTGAAGCTGCTTGTGTGGCAGCAGGACCTGGTATC...CGCCCTCTTTCTACACAGCAGAGTGTGCATGGCAAGGAAATGAGTCACCTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR GCA 90 bp ACAGGGTCAGCATTTCAGATTCCTTCAGGGAGCCAAGGCCACCCTAGGAAGAACACTGCTTCATGTTACTaGACCACATGCACTCCGAGC +
Preference number: 4 (lower is better)
Translates to: TGSAFQIPSGSQGHPRKNTASCY*TTCTPS
Trigger: GCTCGGAGTGCATGTGGTGCAGTAACATGAAGCAGT...GTTCTTCCTAGGGTGGCCTTGGCTCCCTGAAGGAATCTGAAATGCTGACCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR GCA 90 bp AAGGAGGTGACTCATTTCCTTGCCATGCACACTCTGCTGTGTAGAAAGAGGGCGTTGCACAGTGATGCGTaGCCATTGCACTTGCATGGC +
Preference number: 4 (lower is better)
Translates to: KEVTHFLAMHTLLCRKRALHSDA*PLHLHG
Trigger: GCCATGCAAGTGCAATGGGCACGCATCACTGTGCAA...CGCCCTCTTTCTACACAGCAGAGTGTGCATGGCAAGGAAATGAGTCACCTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR GCA 90 bp CTTCATCCAATTCCCCAACGAGATCCCATCTTACACTTCAAGCTTTCCAGATATGCAGGTTCCAGGCTGTaGAGGCGGCTGCTGCTTCCG +
Preference number: 4 (lower is better)
Translates to: LHPIPQRDPILHFKLSRYAGSRL*RRLLLP
Trigger: CGGAAGCAGCAGCCGCCTGCACAGCCTGGAACCTGC...ATATCTGGAAAGCTTGAAGTGTAAGATGGGATCTCGTTGGGGAATTGGATGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CCA 90 bp AAGGAGGTGACTCATTTCCTTGCCATGCACACTCTGCTGTGTAGAAAGAGGGCGCCGAAGACCAACCCATaGAGTCAGAGTGAGCTTGGA +
Preference number: 4 (lower is better)
Translates to: KEVTHFLAMHTLLCRKRAPKTNP*SQSELG
Trigger: TCCAAGCTCACTCTGACTCCATGGGTTGGTCTTCGG...CGCCCTCTTTCTACACAGCAGAGTGTGCATGGCAAGGAAATGAGTCACCTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CCA 90 bp ACAGGGTCAGCATTTCAGATTCCTTCAGGGAGCCAAGGCCACCCTAGGAAGAACATCACTGGGCTCAGATaGCATCCACTGCAGCAAACT +
Preference number: 4 (lower is better)
Translates to: TGSAFQIPSGSQGHPRKNITGLR*HPLQQT
Trigger: AGTTTGCTGCAGTGGATGCCATCTGAGCCCAGTGAT...GTTCTTCCTAGGGTGGCCTTGGCTCCCTGAAGGAATCTGAAATGCTGACCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR TCA 90 bp GACCAAGAGCAGCCAGTGCTTTTAACCACTGAGCCATCTCTCCAGCCCCATTTTTTGGCTGTCCTTCAATaGGCCATGTGCACTTCGTCT +
Preference number: 4 (lower is better)
Translates to: DQEQPVLLTTEPSLQPHFLAVLQ*AMCTSS
Trigger: AGACGAAGTGCACATGGCTCATTGAAGGACAGCCAA...AAAATGGGGCTGGAGAGATGGCTCAGTGGTTAAAAGCACTGGCTGCTCTTGGTC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR TCA 90 bp AAGGAGGTGACTCATTTCCTTGCCATGCACACTCTGCTGTGTAGAAAGAGGGCGCAGTTGTCTGTACAGTaGGGAATGTCACACGACTCC +
Preference number: 4 (lower is better)
Translates to: KEVTHFLAMHTLLCRKRAQLSVQ*GMSHDS
Trigger: GGAGTCGTGTGACATTCCTCACTGTACAGACAACTG...CGCCCTCTTTCTACACAGCAGAGTGTGCATGGCAAGGAAATGAGTCACCTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR TCA 90 bp GACCAAGAGCAGCCAGTGCTTTTAACCACTGAGCCATCTCTCCAGCCCCATTTTTTACAGATGCCTCGGTaGGGAAAGCCACAGTTGTCT +
Preference number: 4 (lower is better)
Translates to: DQEQPVLLTTEPSLQPHFLQMPR*GKPQLS
Trigger: AGACAACTGTGGCTTTCCTCACCGAGGCATCTGTAA...AAAATGGGGCTGGAGAGATGGCTCAGTGGTTAAAAGCACTGGCTGCTCTTGGTC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR TCA 90 bp GGTTGCTCAAACGTCAGGCCTAAAGTGACACTAGGCTGGGCTGGGGTCACTCAGGGTCACGTTCCCTGTTaGATCAATTTTTCCTCCATA +
Preference number: 4 (lower is better)
Translates to: GCSNVRPKVTLGWAGVTQGHVPC*INFSSI
Trigger: TATGGAGGAAAAATTGATTCAACAGGGAACGTGACC...CTGAGTGACCCCAGCCCAGCCTAGTGTCACTTTAGGCCTGACGTTTGAGCAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR TCA 90 bp ACAGGGTCAGCATTTCAGATTCCTTCAGGGAGCCAAGGCCACCCTAGGAAGAACCCAACCACTGCATACTaGTCCTTAGCTTTCGGAGTT +
Preference number: 4 (lower is better)
Translates to: TGSAFQIPSGSQGHPRKNPTTAY*SLAFGV
Trigger: AACTCCGAAAGCTAAGGATCAGTATGCAGTGGTTGG...GTTCTTCCTAGGGTGGCCTTGGCTCCCTGAAGGAATCTGAAATGCTGACCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR TCA 90 bp CACAAGAGTCTTGGGAGGAGTGGGTTAGTGCAGGGCTTAGAGAAAGGCTCCCTCGTTGTACAAGACTGCTaGATGGCCAAATCTGTTGAC +
Preference number: 4 (lower is better)
Translates to: HKSLGRSGLVQGLEKGSLVVQDC*MAKSVD
Trigger: GTCAACAGATTTGGCCATTCAGCAGTCTTGTACAAC...GAGGGAGCCTTTCTCTAAGCCCTGCACTAACCCACTCCTCCCAAGACTCTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR TCA 90 bp CACAAGAGTCTTGGGAGGAGTGGGTTAGTGCAGGGCTTAGAGAAAGGCTCCCTCGCAGCAAACTATTTGTaGATGGAGACATATCCTCCC +
Preference number: 4 (lower is better)
Translates to: HKSLGRSGLVQGLEKGSLAANYL*METYPP
Trigger: GGGAGGATATGTCTCCATTCACAAATAGTTTGCTGC...GAGGGAGCCTTTCTCTAAGCCCTGCACTAACCCACTCCTCCCAAGACTCTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR GCA 90 bp CTACAGTATAGTTATGTACAAGTGCAAGAGGTCAGTGTCGTCATGACTATTTTAAGACGCACTGGCCGGTaGCAGGGTTGCAGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: LQYSYVQVQEVSVVMTILRRTGR*QGCSGR
Trigger: GCGGCCGCTGCAACCCTGGCACCGGCCAGTGCGTCT...TAAAATAGTCATGACGACACTGACCTCTTGCACTTGTACATAACTATACTGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CCA 90 bp CCTGCCCAGGGGAGATGGAACCAGGTCCCTTTCCATGTGCTGAGCAGATGCTGCCTTTATGAGAGGCTCTaGGAAGCTTTAAATCAGAAT +
Preference number: 4 (lower is better)
Translates to: PAQGRWNQVPFHVLSRCCLYERL*EALNQN
Trigger: ATTCTGATTTAAAGCTTCCCAGAGCCTCTCATAAAG...GCAGCATCTGCTCAGCACATGGAAAGGGACCTGGTTCCATCTCCCCTGGGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CCA 90 bp AGGTGTGTGAGGCTGCTGCATAATGCCAGAATACGGAGCACCATAAATGGGGAACTGAGGAGAAGCATTTaGCACCGTGGCTCATGGAAG +
Preference number: 4 (lower is better)
Translates to: RCVRLLHNARIRSTINGELRRSI*HRGSWK
Trigger: CTTCCATGAGCCACGGTGCCAAATGCTTCTCCTCAG...TTCCCCATTTATGGTGCTCCGTATTCTGGCATTATGCAGCAGCCTCACACACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR TCA 90 bp AGGTGTGTGAGGCTGCTGCATAATGCCAGAATACGGAGCACCATAAATGGGGAAGGTATTTGTTGGCGCTaGAAGCCTTGTAGCCACCAT +
Preference number: 4 (lower is better)
Translates to: RCVRLLHNARIRSTINGEGICWR*KPCSHH
Trigger: ATGGTGGCTACAAGGCTTTCAGCGCCAACAAATACC...TTCCCCATTTATGGTGCTCCGTATTCTGGCATTATGCAGCAGCCTCACACACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR TCA 90 bp ACAGGGTCAGCATTTCAGATTCCTTCAGGGAGCCAAGGCCACCCTAGGAAGAACAGAATGGTCCACATCTaGGTATCCACATCGTATCTG +
Preference number: 4 (lower is better)
Translates to: TGSAFQIPSGSQGHPRKNRMVHI*VSTSYL
Trigger: CAGATACGATGTGGATACTCAGATGTGGACCATTCT...GTTCTTCCTAGGGTGGCCTTGGCTCCCTGAAGGAATCTGAAATGCTGACCCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR TCA 90 bp GACCAAGAGCAGCCAGTGCTTTTAACCACTGAGCCATCTCTCCAGCCCCATTTTATAAGCCATGAAGTCTaGGGAGAAGCATTTGGCACC +
Preference number: 4 (lower is better)
Translates to: DQEQPVLLTTEPSLQPHFISHEV*GEAFGT
Trigger: GGTGCCAAATGCTTCTCCTCAGACTTCATGGCTTAT...AAAATGGGGCTGGAGAGATGGCTCAGTGGTTAAAAGCACTGGCTGCTCTTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR TCA 90 bp GTGAGGCTGCTGCATAATGCCAGAATACGGAGCACCATAAATGGGGAAATGCAAGTTGGTGTTGCACAGTaGTGCGTGCCCATTGCACTT +
Preference number: 4 (lower is better)
Translates to: VRLLHNARIRSTINGEMQVGVAQ*CVPIAL
Trigger: AAGTGCAATGGGCACGCATCACTGTGCAACACCAAC...TTGCATTTCCCCATTTATGGTGCTCCGTATTCTGGCATTATGCAGCAGCCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR TCA 90 bp AAGGAGGTGACTCATTTCCTTGCCATGCACACTCTGCTGTGTAGAAAGAGGGCGTGGGAGAAGGCAATCTaGATTTTGATGGGCCAAGTG +
Preference number: 4 (lower is better)
Translates to: KEVTHFLAMHTLLCRKRAWEKAI*ILMGQV
Trigger: CACTTGGCCCATCAAAATTCAGATTGCCTTCTCCCA...CGCCCTCTTTCTACACAGCAGAGTGTGCATGGCAAGGAAATGAGTCACCTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR TCA 90 bp TGTCCCTTCCCATCAACCCATGTGCTTTTCATTCTCATTAGCATTCCCCACCTCACTGTACCAGGTCCATaGAGTTGCTGTGCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: CPFPSTHVLFILISIPHLTVPGP*SCCAGR
Trigger: TCTCCCAGCACAGCAACTTCATGGACCTGGTACAGT...GAGGTGGGGAATGCTAATGAGAATGAAAAGCACATGGGTTGATGGGAAGGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR GCA 90 bp GACCAAGAGCAGCCAGTGCTTTTAACCACTGAGCCATCTCTCCAGCCCCATTTTCAGGAGCCGTCTCATTaGCATCTCTTTCAGGAACAA +
Preference number: 4 (lower is better)
Translates to: DQEQPVLLTTEPSLQPHFQEPSH*HLFQEQ
Trigger: TTGTTCCTGAAAGAGATGGCAATGAGACGGCTCCTG...AAAATGGGGCTGGAGAGATGGCTCAGTGGTTAAAAGCACTGGCTGCTCTTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR GCA 90 bp AAGGAGGTGACTCATTTCCTTGCCATGCACACTCTGCTGTGTAGAAAGAGGGCGTTGGAGTCCACACACTaGTTCATGTTACTGCACCAC +
Preference number: 4 (lower is better)
Translates to: KEVTHFLAMHTLLCRKRALESTH*FMLLHH
Trigger: GTGGTGCAGTAACATGAAGCAGTGTGTGGACTCCAA...CGCCCTCTTTCTACACAGCAGAGTGTGCATGGCAAGGAAATGAGTCACCTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CCA 90 bp ACGAGATCCCATCTTACACTTCAAGCTTTCCAGATATTCTGGTATTTTCCTTTTGCCGGTCACATTCCTTaGCCTCGGCTGCGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: TRSHLTLQAFQIFWYFPFAGHIP*PRLRPS
Trigger: GCTCGGCCGCAGCCGAGGCCAAGGAATGTGACCGGC...AAAAGGAAAATACCAGAATATCTGGAAAGCTTGAAGTGTAAGATGGGATCTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CCA 90 bp ACAGGGTCAGCATTTCAGATTCCTTCAGGGAGCCAAGGCCACCCTAGGAAGAACCGAGTCCAAAAAGACTaGTTAGCTGGCACAGGAATT +
Preference number: 4 (lower is better)
Translates to: TGSAFQIPSGSQGHPRKNRVQKD*LAGTGI
Trigger: AATTCCTGTGCCAGCTAACCAGTCTTTTTGGACTCG...GTTCTTCCTAGGGTGGCCTTGGCTCCCTGAAGGAATCTGAAATGCTGACCCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CCA 90 bp CACAAGAGTCTTGGGAGGAGTGGGTTAGTGCAGGGCTTAGAGAAAGGCTCCCTCACACTGTTCACAGAATaGTTTAGTGGAAGCCATTCC +
Preference number: 4 (lower is better)
Translates to: HKSLGRSGLVQGLEKGSLTLFTE*FSGSHS
Trigger: GGAATGGCTTCCACTAAACCATTCTGTGAACAGTGT...GAGGGAGCCTTTCTCTAAGCCCTGCACTAACCCACTCCTCCCAAGACTCTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CCA 90 bp GACCAAGAGCAGCCAGTGCTTTTAACCACTGAGCCATCTCTCCAGCCCCATTTTAACTCCACCTTCTTCTaGGATGTGAGGGAAGCCAAA +
Preference number: 4 (lower is better)
Translates to: DQEQPVLLTTEPSLQPHFNSTFF*DVREAK
Trigger: TTTGGCTTCCCTCACATCCCAGAAGAAGGTGGAGTT...AAAATGGGGCTGGAGAGATGGCTCAGTGGTTAAAAGCACTGGCTGCTCTTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR TCA 90 bp AAGGAGGTGACTCATTTCCTTGCCATGCACACTCTGCTGTGTAGAAAGAGGGCGCAGAGGTGCGTAGATTaGGTCCCCATCATAAACATA +
Preference number: 4 (lower is better)
Translates to: KEVTHFLAMHTLLCRKRAQRCVD*VPIINI
Trigger: TATGTTTATGATGGGGACTCAATCTACGCACCTCTG...CGCCCTCTTTCTACACAGCAGAGTGTGCATGGCAAGGAAATGAGTCACCTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR TCA 90 bp AAGGAGGTGACTCATTTCCTTGCCATGCACACTCTGCTGTGTAGAAAGAGGGCGTGGCAAGCTGGACAGTaGATGAAAGACCAGTTGTAT +
Preference number: 4 (lower is better)
Translates to: KEVTHFLAMHTLLCRKRAWQAGQ*MKDQLY
Trigger: ATACAACTGGTCTTTCATTCACTGTCCAGCTTGCCA...CGCCCTCTTTCTACACAGCAGAGTGTGCATGGCAAGGAAATGAGTCACCTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR GCA 90 bp CAATACTTACTCCATATTTACACAAGTGCGACAGATGCTAAATCACACATAGTAAAGCGGCCCCCGCAGTaGTGGCATTGCTCGCCCACC +
Preference number: 4 (lower is better)
Translates to: QYLLHIYTSATDAKSHIVKRPPQ*WHCSPT
Trigger: GGTGGGCGAGCAATGCCAGCACTGCGGGGGCCGCTT...TACTATGTGTGATTTAGCATCTGTCGCACTTGTGTAAATATGGAGTAAGTATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR GCA 90 bp CACAAGAGTCTTGGGAGGAGTGGGTTAGTGCAGGGCTTAGAGAAAGGCTCCCTCTCAGATGGCATCCACTaGAGCAAACTATTTGTGAAT +
Preference number: 4 (lower is better)
Translates to: HKSLGRSGLVQGLEKGSLSDGIH*SKLFVN
Trigger: ATTCACAAATAGTTTGCTGCAGTGGATGCCATCTGA...GAGGGAGCCTTTCTCTAAGCCCTGCACTAACCCACTCCTCCCAAGACTCTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR GCA 90 bp TGTCCCTTCCCATCAACCCATGTGCTTTTCATTCTCATTAGCATTCCCCACCTCCATAGAAGCCAGATATaGAGGTCTCGCAGTGCTTGC +
Preference number: 4 (lower is better)
Translates to: CPFPSTHVLFILISIPHLHRSQI*RSRSAC
Trigger: GCAAGCACTGCGAGACCTGCATATCTGGCTTCTATG...GAGGTGGGGAATGCTAATGAGAATGAAAAGCACATGGGTTGATGGGAAGGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CCA 90 bp GTGAGGCTGCTGCATAATGCCAGAATACGGAGCACCATAAATGGGGAAATGCAAACCAGTGGCAGTCATTaGTATTGGCTGTGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: VRLLHNARIRSTINGEMQTSGSH*YWLCSC
Trigger: ACAGCTGCACAGCCAATACCAATGACTGCCACTGGT...TTGCATTTCCCCATTTATGGTGCTCCGTATTCTGGCATTATGCAGCAGCCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CCA 90 bp AGGTGTGTGAGGCTGCTGCATAATGCCAGAATACGGAGCACCATAAATGGGGAAACATGGGGTTATCCTTaGGGCAACTCTCATACTTGG +
Preference number: 4 (lower is better)
Translates to: RCVRLLHNARIRSTINGETWGYP*GNSHTW
Trigger: CCAAGTATGAGAGTTGCCCCAAGGATAACCCCATGT...TTCCCCATTTATGGTGCTCCGTATTCTGGCATTATGCAGCAGCCTCACACACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CCA 90 bp CTTCATCCAATTCCCCAACGAGATCCCATCTTACACTTCAAGCTTTCCAGATATCGCAGTGCTTGCCCGTaGTCAGGTCCTCACACTTCT +
Preference number: 4 (lower is better)
Translates to: LHPIPQRDPILHFKLSRYRSACP*SGPHTS
Trigger: AGAAGTGTGAGGACCTGACCACGGGCAAGCACTGCG...ATATCTGGAAAGCTTGAAGTGTAAGATGGGATCTCGTTGGGGAATTGGATGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR CAA 72 bp TTCTTGAGTTACTTTTGTTTTGTGTGTATTGGGTGTTaGTCTGTGCACCAGGTGGACCACCACAGGCACCCG +
Preference number: 4 (lower is better)
Translates to: FLSYFCFVCIGC*SVHQVDHHRHP
Trigger: CGGGTGCCTGTGGTGGTCCACCTGGTGCACAGACAAACACCCAATACACACAAAACAAAAGTAACTCAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR TCA 90 bp GTGAGGCTGCTGCATAATGCCAGAATACGGAGCACCATAAATGGGGAAATGCAATTGACCACAGCTTTATaGGAGGCTCTGGGAAGCTTT +
Preference number: 4 (lower is better)
Translates to: VRLLHNARIRSTINGEMQLTTAL*EALGSF
Trigger: AAAGCTTCCCAGAGCCTCTCATAAAGCTGTGGTCAA...TTGCATTTCCCCATTTATGGTGCTCCGTATTCTGGCATTATGCAGCAGCCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR TCA 90 bp AAGGAGGTGACTCATTTCCTTGCCATGCACACTCTGCTGTGTAGAAAGAGGGCGTGCACAAGAGCACCCTaGGTATGTAATATACTCCAT +
Preference number: 4 (lower is better)
Translates to: KEVTHFLAMHTLLCRKRACTRAP*VCNILH
Trigger: ATGGAGTATATTACATACTCAGGGTGCTCTTGTGCA...CGCCCTCTTTCTACACAGCAGAGTGTGCATGGCAAGGAAATGAGTCACCTCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR TCA 90 bp GACCAAGAGCAGCCAGTGCTTTTAACCACTGAGCCATCTCTCCAGCCCCATTTTCAATGTCATAAGCCATaGAGTCTGAGGAGAAGCATT +
Preference number: 4 (lower is better)
Translates to: DQEQPVLLTTEPSLQPHFQCHKP*SLRRSI
Trigger: AATGCTTCTCCTCAGACTTCATGGCTTATGACATTG...AAAATGGGGCTGGAGAGATGGCTCAGTGGTTAAAAGCACTGGCTGCTCTTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR TCA 90 bp AGGTGTGTGAGGCTGCTGCATAATGCCAGAATACGGAGCACCATAAATGGGGAAAAGCTGGACAGTGAATaGAAGACCAGTTGTATCTGC +
Preference number: 4 (lower is better)
Translates to: RCVRLLHNARIRSTINGEKLDSE*KTSCIC
Trigger: GCAGATACAACTGGTCTTTCATTCACTGTCCAGCTT...TTCCCCATTTATGGTGCTCCGTATTCTGGCATTATGCAGCAGCCTCACACACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR GCA 90 bp CTTCATCCAATTCCCCAACGAGATCCCATCTTACACTTCAAGCTTTCCAGATATCGGCTGGCCATCTGTTaGATCTCCCGAAGAAGTTGC +
Preference number: 4 (lower is better)
Translates to: LHPIPQRDPILHFKLSRYRLAIC*ISRRSC
Trigger: GCAACTTCTTCGGGAGATGCAACAGATGGCCAGCCG...ATATCTGGAAAGCTTGAAGTGTAAGATGGGATCTCGTTGGGGAATTGGATGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CCA 90 bp AGGTGTGTGAGGCTGCTGCATAATGCCAGAATACGGAGCACCATAAATGGGGAAGGCAGTCATTGGTATTaGCTGTGCAGCTGTAACAAT +
Preference number: 4 (lower is better)
Translates to: RCVRLLHNARIRSTINGEGSHWY*LCSCNN
Trigger: ATTGTTACAGCTGCACAGCCAATACCAATGACTGCC...TTCCCCATTTATGGTGCTCCGTATTCTGGCATTATGCAGCAGCCTCACACACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CCA 90 bp TGTCCCTTCCCATCAACCCATGTGCTTTTCATTCTCATTAGCATTCCCCACCTCTCTCATACTTGGCAATaGAGATCTGGCCTTCTGTGC +
Preference number: 4 (lower is better)
Translates to: CPFPSTHVLFILISIPHLSHTWQ*RSGLLC
Trigger: GCACAGAAGGCCAGATCTCCATTGCCAAGTATGAGA...GAGGTGGGGAATGCTAATGAGAATGAAAAGCACATGGGTTGATGGGAAGGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CCA 90 bp ACAGGGTCAGCATTTCAGATTCCTTCAGGGAGCCAAGGCCACCCTAGGAAGAACGCCAAAAAGGCATTGTaGTTCCTACAGGACAATTTA +
Preference number: 4 (lower is better)
Translates to: TGSAFQIPSGSQGHPRKNAKKAL*FLQDNL
Trigger: TAAATTGTCCTGTAGGAACCACAATGCCTTTTTGGC...GTTCTTCCTAGGGTGGCCTTGGCTCCCTGAAGGAATCTGAAATGCTGACCCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR TCA 90 bp TGTCCCTTCCCATCAACCCATGTGCTTTTCATTCTCATTAGCATTCCCCACCTCGCGAGAGGAAACAACTaGAGAAAGTCACGAAGAACT +
Preference number: 4 (lower is better)
Translates to: CPFPSTHVLFILISIPHLARGNN*RKSRRT
Trigger: AGTTCTTCGTGACTTTCTTCAGTTGTTTCCTCTCGC...GAGGTGGGGAATGCTAATGAGAATGAAAAGCACATGGGTTGATGGGAAGGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR GCA 90 bp TGTCCCTTCCCATCAACCCATGTGCTTTTCATTCTCATTAGCATTCCCCACCTCAAGACCAGTTGTATCTaGTGTCCTCTAGACACATGC +
Preference number: 4 (lower is better)
Translates to: CPFPSTHVLFILISIPHLKTSCI*CPLDTC
Trigger: GCATGTGTCTAGAGGACAGCAGATACAACTGGTCTT...GAGGTGGGGAATGCTAATGAGAATGAAAAGCACATGGGTTGATGGGAAGGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CCA 90 bp CTTCATCCAATTCCCCAACGAGATCCCATCTTACACTTCAAGCTTTCCAGATATCCTCTAGACACATGCTaGAGTTCAGAAGGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: LHPIPQRDPILHFKLSRYPLDTC*SSEGAV
Trigger: CACAGCCCCTTCTGAACTCCAGCATGTGTCTAGAGG...ATATCTGGAAAGCTTGAAGTGTAAGATGGGATCTCGTTGGGGAATTGGATGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR CAA 72 bp AACAGATCAGGGCCTGGTAGGATAACTTCCCAGAGCTaGGATACCCAGTATATGGCACAGAAACAGATTAGG +
Preference number: 4 (lower is better)
Translates to: NRSGPGRITSQS*DTQYMAQKQIR
Trigger: CCTAATCTGTTTCTGTGCCATATACTGGGTATCCAAGCTCTGGGAAGTTATCCTACCAGGCCCTGATCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR GCA 90 bp CTTCATCCAATTCCCCAACGAGATCCCATCTTACACTTCAAGCTTTCCAGATATGATGCCCAACAGCTCTaGTTGATCTTCCAGACCACT +
Preference number: 4 (lower is better)
Translates to: LHPIPQRDPILHFKLSRYDAQQL*LIFQTT
Trigger: AGTGGTCTGGAAGATCAAGCAGAGCTGTTGGGCATC...ATATCTGGAAAGCTTGAAGTGTAAGATGGGATCTCGTTGGGGAATTGGATGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CCA 90 bp CTTCATCCAATTCCCCAACGAGATCCCATCTTACACTTCAAGCTTTCCAGATATAGCAGGAGCACCCTCTaGTATCGCTTGCATTACAGA +
Preference number: 4 (lower is better)
Translates to: LHPIPQRDPILHFKLSRYSRSTL*YRLHYR
Trigger: TCTGTAATGCAAGCGATACCAGAGGGTGCTCCTGCT...ATATCTGGAAAGCTTGAAGTGTAAGATGGGATCTCGTTGGGGAATTGGATGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CCA 90 bp AGGTGTGTGAGGCTGCTGCATAATGCCAGAATACGGAGCACCATAAATGGGGAATGGTCACATCTGTCATaGTCAAGGGTTCTTTTAGAA +
Preference number: 4 (lower is better)
Translates to: RCVRLLHNARIRSTINGEWSHLS*SRVLLE
Trigger: TTCTAAAAGAACCCTTGACCATGACAGATGTGACCA...TTCCCCATTTATGGTGCTCCGTATTCTGGCATTATGCAGCAGCCTCACACACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CCA 90 bp GTGAGGCTGCTGCATAATGCCAGAATACGGAGCACCATAAATGGGGAAATGCAATTGAGAGGGTTTCCCTaGTATCGATTTTCTACCTCA +
Preference number: 4 (lower is better)
Translates to: VRLLHNARIRSTINGEMQLRGFP*YRFSTS
Trigger: TGAGGTAGAAAATCGATACCAGGGAAACCCTCTCAA...TTGCATTTCCCCATTTATGGTGCTCCGTATTCTGGCATTATGCAGCAGCCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR CAA 72 bp AGCAGTGTTTTGTGCATCAGTGATTTATGGTTCAGCTaGGAACTGTCACTCCACAAGAGTCTTGGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: SSVLCISDLWFS*ELSLHKSLGRS
Trigger: ACTCCTCCCAAGACTCTTGTGGAGTGACAGTTCCAAGCTGAACCATAAATCACTGATGCACAAAACACTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR GCA 90 bp CTACAGTATAGTTATGTACAAGTGCAAGAGGTCAGTGTCGTCATGACTATTTTACGCTGCTGCTGTTACTaGTCTTACACTCTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: LQYSYVQVQEVSVVMTILRCCCY*SYTLLG
Trigger: GCCGAGGAGAGTGTAAGAGCAGTAACAGCAGCAGCG...TAAAATAGTCATGACGACACTGACCTCTTGCACTTGTACATAACTATACTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR GCA 90 bp CAATACTTACTCCATATTTACACAAGTGCGACAGATGCTAAATCACACATAGTACCGGATACCAGGTCCTaGTGCCACACAAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: QYLLHIYTSATDAKSHIVPDTRS*CHTSSF
Trigger: GAAGCTGCTTGTGTGGCAGCAGGACCTGGTATCCGG...TACTATGTGTGATTTAGCATCTGTCGCACTTGTGTAAATATGGAGTAAGTATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR GCA 90 bp CTTCATCCAATTCCCCAACGAGATCCCATCTTACACTTCAAGCTTTCCAGATATTGCTTGTTCTTCAGTTaGCAACTCCCAGGAGGTACA +
Preference number: 4 (lower is better)
Translates to: LHPIPQRDPILHFKLSRYCLFFS*QLPGGT
Trigger: TGTACCTCCTGGGAGTTGGCAACTGAAGAACAAGCA...ATATCTGGAAAGCTTGAAGTGTAAGATGGGATCTCGTTGGGGAATTGGATGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR GCA 90 bp AGGTGTGTGAGGCTGCTGCATAATGCCAGAATACGGAGCACCATAAATGGGGAAAGCTGGTTTTCTTATTaGAGTAGTACATGGGGTTAT +
Preference number: 4 (lower is better)
Translates to: RCVRLLHNARIRSTINGESWFSY*SSTWGY
Trigger: ATAACCCCATGTACTACTGCAATAAGAAAACCAGCT...TTCCCCATTTATGGTGCTCCGTATTCTGGCATTATGCAGCAGCCTCACACACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR GCA 90 bp CTACAGTATAGTTATGTACAAGTGCAAGAGGTCAGTGTCGTCATGACTATTTTAGCTCCAAGCAATGGCTaGAGGTACAGTAGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: LQYSYVQVQEVSVVMTILAPSNG*RYSSQS
Trigger: GCTCTGGCTACTGTACCTGCAGCCATTGCTTGGAGC...TAAAATAGTCATGACGACACTGACCTCTTGCACTTGTACATAACTATACTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CCA 90 bp TGTCCCTTCCCATCAACCCATGTGCTTTTCATTCTCATTAGCATTCCCCACCTCTTCTCACAGATACTCTaGTTGATGCATTTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: CPFPSTHVLFILISIPHLFSQIL*LMHLLC
Trigger: ACACAGCAAATGCATCAACCAGAGTATCTGTGAGAA...GAGGTGGGGAATGCTAATGAGAATGAAAAGCACATGGGTTGATGGGAAGGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR TCA 90 bp TGTCCCTTCCCATCAACCCATGTGCTTTTCATTCTCATTAGCATTCCCCACCTCACATTATATTTCCATTaGCCACAGCTTTATGAGAGG +
Preference number: 4 (lower is better)
Translates to: CPFPSTHVLFILISIPHLTLYFH*PQLYER
Trigger: CCTCTCATAAAGCTGTGGTCAATGGAAATATAATGT...GAGGTGGGGAATGCTAATGAGAATGAAAAGCACATGGGTTGATGGGAAGGGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR GCA 90 bp GTGAGGCTGCTGCATAATGCCAGAATACGGAGCACCATAAATGGGGAAATGCAATCCAAGTCATATTCCTaGACAACGCTTATATATCCA +
Preference number: 4 (lower is better)
Translates to: VRLLHNARIRSTINGEMQSKSYS*TTLIYP
Trigger: TGGATATATAAGCGTTGTGCAGGAATATGACTTGGA...TTGCATTTCCCCATTTATGGTGCTCCGTATTCTGGCATTATGCAGCAGCCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR GCA 90 bp CTTCATCCAATTCCCCAACGAGATCCCATCTTACACTTCAAGCTTTCCAGATATGAGTTTCCAACCAAATaGCAGCCATTGCCACAGATA +
Preference number: 4 (lower is better)
Translates to: LHPIPQRDPILHFKLSRYEFPTK*QPLPQI
Trigger: TATCTGTGGCAATGGCTGGCATTTGGTTGGAAACTC...ATATCTGGAAAGCTTGAAGTGTAAGATGGGATCTCGTTGGGGAATTGGATGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR CAA 72 bp CTTGCTGTCTTCCTAGGTATTCTAAGAGCTGAATCATaGTTCAGTTACCTAATGGGCACAAGGCTACAGAAC +
Preference number: 4 (lower is better)
Translates to: LAVFLGILRAES*FSYLMGTRLQN
Trigger: GTTCTGTAGCCTTGTGCCCATTAGGTAACTGAACAATGATTCAGCTCTTAGAATACCTAGGAAGACAGCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR TCA 90 bp CTTCATCCAATTCCCCAACGAGATCCCATCTTACACTTCAAGCTTTCCAGATATGTTTCTTACAGCTCCTaGCTTCTCCTTGTACACTAT +
Preference number: 4 (lower is better)
Translates to: LHPIPQRDPILHFKLSRYVSYSS*LLLVHY
Trigger: ATAGTGTACAAGGAGAAGTCAGGAGCTGTAAGAAAC...ATATCTGGAAAGCTTGAAGTGTAAGATGGGATCTCGTTGGGGAATTGGATGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR GCA 90 bp ACGAGATCCCATCTTACACTTCAAGCTTTCCAGATATTCTGGTATTTTCCTTTTGGACACAGTGATCATTaGACCAGTGGCAGTCATTGG +
Preference number: 4 (lower is better)
Translates to: TRSHLTLQAFQIFWYFPFGHSDH*TSGSHW
Trigger: CCAATGACTGCCACTGGTGCAATGATCACTGTGTCC...AAAAGGAAAATACCAGAATATCTGGAAAGCTTGAAGTGTAAGATGGGATCTCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CCA 90 bp CAATACTTACTCCATATTTACACAAGTGCGACAGATGCTAAATCACACATAGTAAGGCCACGTAGGCATTaGAGTCCACACACTGCTTCA +
Preference number: 4 (lower is better)
Translates to: QYLLHIYTSATDAKSHIVRPRRH*SPHTAS
Trigger: TGAAGCAGTGTGTGGACTCCAATGCCTACGTGGCCT...TACTATGTGTGATTTAGCATCTGTCGCACTTGTGTAAATATGGAGTAAGTATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
3UTR CAA 72 bp TTTCTGCTCTTTAATAGTGATGCAAAGAGTCGTGTTTaGAGAGGTGAGCCTTCTAGCAGTGTTTTGTGCATC +
Preference number: 4 (lower is better)
Translates to: FLLFNSDAKSRV*RGEPSSSVLCI
Trigger: GATGCACAAAACACTGCTAGAAGGCTCACCTCTCAAAACACGACTCTTTGCATCACTATTAAAGAGCAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR TCA 90 bp ACGAGATCCCATCTTACACTTCAAGCTTTCCAGATATTCTGGTATTTTCCTTTTAATCTGTTGACATCATaGTGGAGCTCAGGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: TRSHLTLQAFQIFWYFPFNLLTS*WSSGLG
Trigger: TCCCAGACCTGAGCTCCATCATGATGTCAACAGATT...AAAAGGAAAATACCAGAATATCTGGAAAGCTTGAAGTGTAAGATGGGATCTCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR GCA 90 bp CAATACTTACTCCATATTTACACAAGTGCGACAGATGCTAAATCACACATAGTACTAGGGCACAGCTCCTaGAGCTGGTTTTCTTATTGC +
Preference number: 4 (lower is better)
Translates to: QYLLHIYTSATDAKSHIVLGHSS*SWFSYC
Trigger: GCAATAAGAAAACCAGCTGCAGGAGCTGTGCCCTAG...TACTATGTGTGATTTAGCATCTGTCGCACTTGTGTAAATATGGAGTAAGTATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR GCA 90 bp CAATACTTACTCCATATTTACACAAGTGCGACAGATGCTAAATCACACATAGTATGGTACAGAAGCACTTaGCGGTGTTGGTGTTGCACA +
Preference number: 4 (lower is better)
Translates to: QYLLHIYTSATDAKSHIVWYRST*RCWCCT
Trigger: TGTGCAACACCAACACCGGCAAGTGCTTCTGTACCA...TACTATGTGTGATTTAGCATCTGTCGCACTTGTGTAAATATGGAGTAAGTATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CCA 90 bp CAATACTTACTCCATATTTACACAAGTGCGACAGATGCTAAATCACACATAGTACTCCAAACACCAGCATaGTTCCACTCACTATCACAG +
Preference number: 4 (lower is better)
Translates to: QYLLHIYTSATDAKSHIVLQTPA*FHSLSQ
Trigger: CTGTGATAGTGAGTGGAACCATGCTGGTGTTTGGAG...TACTATGTGTGATTTAGCATCTGTCGCACTTGTGTAAATATGGAGTAAGTATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR TCA 90 bp CAATACTTACTCCATATTTACACAAGTGCGACAGATGCTAAATCACACATAGTAAATGGCCAAATCTGTTaGCATCATGATGGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: QYLLHIYTSATDAKSHIVNGQIC*HHDGAQ
Trigger: CTGAGCTCCATCATGATGTCAACAGATTTGGCCATT...TACTATGTGTGATTTAGCATCTGTCGCACTTGTGTAAATATGGAGTAAGTATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR TCA 90 bp ACGAGATCCCATCTTACACTTCAAGCTTTCCAGATATTCTGGTATTTTCCTTTTTTATACTTCCCCCAATaGGATCAGGAGGTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: TRSHLTLQAFQIFWYFPFLYFPQ*DQEVLH
Trigger: ATGAAGAACCTCCTGATCTCATTGGGGGAAGTATAA...AAAAGGAAAATACCAGAATATCTGGAAAGCTTGAAGTGTAAGATGGGATCTCGT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR GCA 90 bp ACGAGATCCCATCTTACACTTCAAGCTTTCCAGATATTCTGGTATTTTCCTTTTTGCATTAATCGAAGCTaGTTAAGGACAAACTCCACC +
Preference number: 4 (lower is better)
Translates to: TRSHLTLQAFQIFWYFPFCINRS*LRTNST
Trigger: GGTGGAGTTTGTCCTTAAGCAGCTTCGATTAATGCA...AAAAGGAAAATACCAGAATATCTGGAAAGCTTGAAGTGTAAGATGGGATCTCGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR TCA 90 bp CAATACTTACTCCATATTTACACAAGTGCGACAGATGCTAAATCACACATAGTACTTGATGTTGGTTTTTaGAACAACAGGCACCTCTTC +
Preference number: 4 (lower is better)
Translates to: QYLLHIYTSATDAKSHIVLDVGF*NNRHLF
Trigger: GAAGAGGTGCCTGTTGTTTCAAAAACCAACATCAAG...TACTATGTGTGATTTAGCATCTGTCGCACTTGTGTAAATATGGAGTAAGTATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR GCA 90 bp CTACAGTATAGTTATGTACAAGTGCAAGAGGTCAGTGTCGTCATGACTATTTTACAGGTCCTTTATAGCTaGCCTCAATACATTTTCCTT +
Preference number: 4 (lower is better)
Translates to: LQYSYVQVQEVSVVMTILQVLYS*PQYIFL
Trigger: AAGGAAAATGTATTGAGGGCAGCTATAAAGGACCTG...TAAAATAGTCATGACGACACTGACCTCTTGCACTTGTACATAACTATACTGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CCA 90 bp CTACAGTATAGTTATGTACAAGTGCAAGAGGTCAGTGTCGTCATGACTATTTTATATATATCCATAGAGTaGGCAATGACCGAAGATGAC +
Preference number: 4 (lower is better)
Translates to: LQYSYVQVQEVSVVMTILYISIE*AMTEDD
Trigger: GTCATCTTCGGTCATTGCCCACTCTATGGATATATA...TAAAATAGTCATGACGACACTGACCTCTTGCACTTGTACATAACTATACTGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR TCA 90 bp ACGAGATCCCATCTTACACTTCAAGCTTTCCAGATATTCTGGTATTTTCCTTTTAACCATGCTGTAATCTaGATGGTTGAACATATATCC +
Preference number: 4 (lower is better)
Translates to: TRSHLTLQAFQIFWYFPFNHAVI*MVEHIS
Trigger: GGATATATGTTCAACCATTCAGATTACAGCATGGTT...AAAAGGAAAATACCAGAATATCTGGAAAGCTTGAAGTGTAAGATGGGATCTCGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CCA 90 bp CAATACTTACTCCATATTTACACAAGTGCGACAGATGCTAAATCACACATAGTACAAACTATTTGTGAATaGAGACATATCCTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: QYLLHIYTSATDAKSHIVQTICE*RHILPA
Trigger: TGCTGGGAGGATATGTCTCCATTCACAAATAGTTTG...TACTATGTGTGATTTAGCATCTGTCGCACTTGTGTAAATATGGAGTAAGTATTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS GCA 90 bp GCGCGCGGTCCCGGCCTCCAGGCCCCTGTCGCGGTGCAGGGTCGGTaGTGCCTGCCCTTCCTGCCCGCAGGCGCTGCTGTCGCCGTCGTG +
Preference number: 5 (lower is better)
Translates to: ARGPGLQAPVAVQGR*CLPFLPAGAAVAVV
Trigger: CACGACGGCGACAGCAGCGCCTGCGGGCAGGAAGGGCAGGCAGCACCGACCCTGCACCGCGACAGGGGCCTGGAGGCCGGGACCGCGCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS GCA 90 bp GACACAGCCGGGCGCGCGGTCCCGGCCTCCAGGCCCCTGTCGCGGTaGAGGGTCGGTGCTGCCTGCCCTTCCTGCCCGCAGGCGCTGCTG +
Preference number: 5 (lower is better)
Translates to: DTAGRAVPASRPLSR*RVGAACPSCPQALL
Trigger: CAGCAGCGCCTGCGGGCAGGAAGGGCAGGCAGCACCGACCCTGCACCGCGACAGGGGCCTGGAGGCCGGGACCGCGCGCCCGGCTGTGTC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS CCA 90 bp CGAGCTGCTGCTAGTGCACTCGCCACACGCTGTCCGCAGGGCACATaGTGTCCGGCACTGCTTGGCACTGTGGTTTGCAGGCCTTTCACA +
Preference number: 5 (lower is better)
Translates to: RAAASALATRCPQGT*CPALLGTVVCRPFT
Trigger: TGTGAAAGGCCTGCAAACCACAGTGCCAAGCAGTGCCGGACACCATGTGCCCTGCGGACAGCGTGTGGCGAGTGCACTAGCAGCAGCTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS GCA 90 bp TCGAGACGACTGTGTGTCCCACAGACACCGGATACCAGGTCCTGCTaGCACACAAGCAGCTTCACTGCGGTGTGCATCGCACTGCTCCGA +
Preference number: 5 (lower is better)
Translates to: SRRLCVPQTPDTRSC*HTSSFTAVCIALLR
Trigger: TCGGAGCAGTGCGATGCACACCGCAGTGAAGCTGCTTGTGTGGCAGCAGGACCTGGTATCCGGTGTCTGTGGGACACACAGTCGTCTCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CAA 90 bp GGGACCTCAGCATCACCTTCAGCTCTCACGGGGTCGGCACTGGTCTCCTCCACCTCTGCAAGCCGGTATTaGTTGGCGCTGAAAGCCTTG +
Preference number: 5 (lower is better)
Translates to: GTSASPSALTGSALVSSTSASRY*LALKAL
Trigger: CAAGGCTTTCAGCGCCAACAAATACCGGCTTGCAGA...GGTGGAGGAGACCAGTGCCGACCCCGTGAGAGCTGAAGGTGATGCTGAGGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS GCA 90 bp GGTCCTGCTGCCACACAAGCAGCTTCACTGCGGTGTGCATCGCACTaGTCCGAGGTAAAGACCAAGACGTCACTGAGGAGGAGGCTGTTG +
Preference number: 5 (lower is better)
Translates to: GPAATQAASLRCASH*SEVKTKTSLRRRLL
Trigger: CAACAGCCTCCTCCTCAGTGACGTCTTGGTCTTTACCTCGGAGCAGTGCGATGCACACCGCAGTGAAGCTGCTTGTGTGGCAGCAGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS GCA 90 bp CCGGATACCAGGTCCTGCTGCCACACAAGCAGCTTCACTGCGGTGTaGATCGCACTGCTCCGAGGTAAAGACCAAGACGTCACTGAGGAG +
Preference number: 5 (lower is better)
Translates to: PDTRSCCHTSSFTAV*IALLRGKDQDVTEE
Trigger: CTCCTCAGTGACGTCTTGGTCTTTACCTCGGAGCAGTGCGATGCACACCGCAGTGAAGCTGCTTGTGTGGCAGCAGGACCTGGTATCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS GCA 90 bp ACATCGAGACGACTGTGTGTCCCACAGACACCGGATACCAGGTCCTaGTGCCACACAAGCAGCTTCACTGCGGTGTGCATCGCACTGCTC +
Preference number: 5 (lower is better)
Translates to: TSRRLCVPQTPDTRS*CHTSSFTAVCIALL
Trigger: GAGCAGTGCGATGCACACCGCAGTGAAGCTGCTTGTGTGGCAGCAGGACCTGGTATCCGGTGTCTGTGGGACACACAGTCGTCTCGATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CAA 90 bp AAGGAGGTGACTCATTTCCTTGCCATGCACACTCTGCTGTGTAGAAAGAGGGCGTTGCAGCGGCCGCCGTaGACACACGGCCGGTCACAT +
Preference number: 5 (lower is better)
Translates to: KEVTHFLAMHTLLCRKRALQRPP*THGRSH
Trigger: ATGTGACCGGCCGTGTGTCAACGGCGGCCGCTGCAA...CGCCCTCTTTCTACACAGCAGAGTGTGCATGGCAAGGAAATGAGTCACCTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CAA 90 bp GGGACCTCAGCATCACCTTCAGCTCTCACGGGGTCGGCACTGGTCTCCTCCACCTACATGGGGTTATCCTaGGGGCAACTCTCATACTTG +
Preference number: 5 (lower is better)
Translates to: GTSASPSALTGSALVSSTYMGLS*GQLSYL
Trigger: CAAGTATGAGAGTTGCCCCAAGGATAACCCCATGTA...GGTGGAGGAGACCAGTGCCGACCCCGTGAGAGCTGAAGGTGATGCTGAGGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CAA 90 bp GGTTGCTCAAACGTCAGGCCTAAAGTGACACTAGGCTGGGCTGGGGTCACTCAGTGGCACTCGTCCCCCTaGACACCTTTGGTGGTACAG +
Preference number: 5 (lower is better)
Translates to: GCSNVRPKVTLGWAGVTQWHSSP*TPLVVQ
Trigger: CTGTACCACCAAAGGTGTCAAGGGGGACGAGTGCCA...CTGAGTGACCCCAGCCCAGCCTAGTGTCACTTTAGGCCTGACGTTTGAGCAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CAA 90 bp GACCAAGAGCAGCCAGTGCTTTTAACCACTGAGCCATCTCTCCAGCCCCATTTTCAGGGCGATGCACTCTaGATTCCGGGGCTCCCACTG +
Preference number: 5 (lower is better)
Translates to: DQEQPVLLTTEPSLQPHFQGDAL*IPGLPL
Trigger: CAGTGGGAGCCCCGGAATCAAGAGTGCATCGCCCTG...AAAATGGGGCTGGAGAGATGGCTCAGTGGTTAAAAGCACTGGCTGCTCTTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CAA 90 bp GGTTGCTCAAACGTCAGGCCTAAAGTGACACTAGGCTGGGCTGGGGTCACTCAGCTGCCATTGAGAGGGTaGATGCAGGTTGCAGCCTTT +
Preference number: 5 (lower is better)
Translates to: GCSNVRPKVTLGWAGVTQLPLRG*MQVAAF
Trigger: AAAGGCTGCAACCTGCATCAACCCTCTCAATGGCAG...CTGAGTGACCCCAGCCCAGCCTAGTGTCACTTTAGGCCTGACGTTTGAGCAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CAA 90 bp GTGAGGCTGCTGCATAATGCCAGAATACGGAGCACCATAAATGGGGAAATGCAAGGTGTCCGGCACTGCTaGGCACTGTGGTTTGCAGGC +
Preference number: 5 (lower is better)
Translates to: VRLLHNARIRSTINGEMQGVRHC*ALWFAG
Trigger: GCCTGCAAACCACAGTGCCAAGCAGTGCCGGACACC...TTGCATTTCCCCATTTATGGTGCTCCGTATTCTGGCATTATGCAGCAGCCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS TCA 90 bp ATGGAGATCTGGCCTTCTGTGCAGCTGTGGTTCACAGGGACACAGTaGTCATTGCACCAGTGGCAGTCATTGGTATTGGCTGTGCAGCTG +
Preference number: 5 (lower is better)
Translates to: MEIWPSVQLWFTGTQ*SLHQWQSLVLAVQL
Trigger: CAGCTGCACAGCCAATACCAATGACTGCCACTGGTGCAATGATCACTGTGTCCCTGTGAACCACAGCTGCACAGAAGGCCAGATCTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS TCA 90 bp TCCAGGCTGTGCAGGCGGCTGCTGCTTCCGGTTTCTTACAGCTCCTaGCTTCTCCTTGTACACTATTGGCATCTGCTGAGAAATGTCCAC +
Preference number: 5 (lower is better)
Translates to: SRLCRRLLLPVSYSS*LLLVHYWHLLRNVH
Trigger: GTGGACATTTCTCAGCAGATGCCAATAGTGTACAAGGAGAAGTCAGGAGCTGTAAGAAACCGGAAGCAGCAGCCGCCTGCACAGCCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CAA 90 bp AAGGAGGTGACTCATTTCCTTGCCATGCACACTCTGCTGTGTAGAAAGAGGGCGCACCAGTGGCAGTCATaGGTATTGGCTGTGCAGCTG +
Preference number: 5 (lower is better)
Translates to: KEVTHFLAMHTLLCRKRAHQWQS*VLAVQL
Trigger: CAGCTGCACAGCCAATACCAATGACTGCCACTGGTG...CGCCCTCTTTCTACACAGCAGAGTGTGCATGGCAAGGAAATGAGTCACCTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CAA 90 bp AGGTGTGTGAGGCTGCTGCATAATGCCAGAATACGGAGCACCATAAATGGGGAAGCTTGGCACTGTGGTTaGCAGGCCTTTCACAGACGC +
Preference number: 5 (lower is better)
Translates to: RCVRLLHNARIRSTINGEAWHCG*QAFHRR
Trigger: GCGTCTGTGAAAGGCCTGCAAACCACAGTGCCAAGC...TTCCCCATTTATGGTGCTCCGTATTCTGGCATTATGCAGCAGCCTCACACACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CAA 90 bp AAGGAGGTGACTCATTTCCTTGCCATGCACACTCTGCTGTGTAGAAAGAGGGCGGTGGTACAGAAGCACTaGCCGGTGTTGGTGTTGCAC +
Preference number: 5 (lower is better)
Translates to: KEVTHFLAMHTLLCRKRAVVQKH*PVLVLH
Trigger: GTGCAACACCAACACCGGCAAGTGCTTCTGTACCAC...CGCCCTCTTTCTACACAGCAGAGTGTGCATGGCAAGGAAATGAGTCACCTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CAA 90 bp AAGGAGGTGACTCATTTCCTTGCCATGCACACTCTGCTGTGTAGAAAGAGGGCGACCAGGTCCATGAAGTaGCTGTGCTGGGAGAAGGCA +
Preference number: 5 (lower is better)
Translates to: KEVTHFLAMHTLLCRKRATRSMK*LCWEKA
Trigger: TGCCTTCTCCCAGCACAGCAACTTCATGGACCTGGT...CGCCCTCTTTCTACACAGCAGAGTGTGCATGGCAAGGAAATGAGTCACCTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS TCA 90 bp ACCTTTGGTGGTACAGAAGCACTTGCCGGTGTTGGTGTTGCACAGTaGTGCGTGCCCATTGCACTTGCATGGCTGACATTTGCCTCCATT +
Preference number: 5 (lower is better)
Translates to: TFGGTEALAGVGVAQ*CVPIALAWLTFASI
Trigger: AATGGAGGCAAATGTCAGCCATGCAAGTGCAATGGGCACGCATCACTGTGCAACACCAACACCGGCAAGTGCTTCTGTACCACCAAAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CAA 90 bp GACCAAGAGCAGCCAGTGCTTTTAACCACTGAGCCATCTCTCCAGCCCCATTTTTCACAGACGCTGCCATaGAGAGGGTTGATGCAGGTT +
Preference number: 5 (lower is better)
Translates to: DQEQPVLLTTEPSLQPHFSQTLP*RGLMQV
Trigger: AACCTGCATCAACCCTCTCAATGGCAGCGTCTGTGA...AAAATGGGGCTGGAGAGATGGCTCAGTGGTTAAAAGCACTGGCTGCTCTTGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CAA 90 bp AAGGAGGTGACTCATTTCCTTGCCATGCACACTCTGCTGTGTAGAAAGAGGGCGTCCCCCTTGACACCTTaGGTGGTACAGAAGCACTTG +
Preference number: 5 (lower is better)
Translates to: KEVTHFLAMHTLLCRKRASPLTP*VVQKHL
Trigger: CAAGTGCTTCTGTACCACCAAAGGTGTCAAGGGGGA...CGCCCTCTTTCTACACAGCAGAGTGTGCATGGCAAGGAAATGAGTCACCTCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CAA 90 bp CCTGCCCAGGGGAGATGGAACCAGGTCCCTTTCCATGTGCTGAGCAGATGCTGCAAGTTTTTGGAGGCATaGATGAACATGTCCAAATCC +
Preference number: 5 (lower is better)
Translates to: PAQGRWNQVPFHVLSRCCKFLEA*MNMSKS
Trigger: GGATTTGGACATGTTCATCAATGCCTCCAAAAACTT...GCAGCATCTGCTCAGCACATGGAAAGGGACCTGGTTCCATCTCCCCTGGGCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CAA 90 bp GGTTGCTCAAACGTCAGGCCTAAAGTGACACTAGGCTGGGCTGGGGTCACTCAGCAGGTGATGTTGAGGTaGAAGTTTTTGGAGGCATTG +
Preference number: 5 (lower is better)
Translates to: GCSNVRPKVTLGWAGVTQQVMLR*KFLEAL
Trigger: CAATGCCTCCAAAAACTTCAACCTCAACATCACCTG...CTGAGTGACCCCAGCCCAGCCTAGTGTCACTTTAGGCCTGACGTTTGAGCAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS TCA 90 bp ATATTCTTCTCGAGTCCAAAAAGACTGGTTAGCTGGCACAGGAATTaGGCATCCAGGACCCTGCCAGTGAGGAAAGCAGGAGCACCCTCT +
Preference number: 5 (lower is better)
Translates to: IFFSSPKRLVSWHRN*ASRTLPVRKAGAPS
Trigger: AGAGGGTGCTCCTGCTTTCCTCACTGGCAGGGTCCTGGATGCTCAATTCCTGTGCCAGCTAACCAGTCTTTTTGGACTCGAGAAGAATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS TCA 90 bp CATCGTATCTGTAGAGGTCATCTGCAAGCCGGTATTTGTTGGCGCTaGAAGCCTTGTAGCCACCATGAACGTACAGAGCCTTGGTCCTGT +
Preference number: 5 (lower is better)
Translates to: HRICRGHLQAGICWR*KPCSHHERTEPWSC
Trigger: ACAGGACCAAGGCTCTGTACGTTCATGGTGGCTACAAGGCTTTCAGCGCCAACAAATACCGGCTTGCAGATGACCTCTACAGATACGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS GCA 90 bp TCTGGCCTTCTGTGCAGCTGTGGTTCACAGGGACACAGTGATCATTaGACCAGTGGCAGTCATTGGTATTGGCTGTGCAGCTGTAACAAT +
Preference number: 5 (lower is better)
Translates to: SGLLCSCGSQGHSDH*TSGSHWYWLCSCNN
Trigger: ATTGTTACAGCTGCACAGCCAATACCAATGACTGCCACTGGTGCAATGATCACTGTGTCCCTGTGAACCACAGCTGCACAGAAGGCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS GCA 90 bp AAGATCCCACAGAAGCCAGCATCACTGGGCTCAGATGGCATCCACTaGAGCAAACTATTTGTGAATGGAGACATATCCTCCCAGCACCAG +
Preference number: 5 (lower is better)
Translates to: KIPQKPASLGSDGIH*SKLFVNGDISSQHQ
Trigger: CTGGTGCTGGGAGGATATGTCTCCATTCACAAATAGTTTGCTGCAGTGGATGCCATCTGAGCCCAGTGATGCTGGCTTCTGTGGGATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CAA 90 bp AAGGAGGTGACTCATTTCCTTGCCATGCACACTCTGCTGTGTAGAAAGAGGGCGTCAGGAGCCGTCTCATaGCCATCTCTTTCAGGAACA +
Preference number: 5 (lower is better)
Translates to: KEVTHFLAMHTLLCRKRASGAVS*PSLSGT
Trigger: TGTTCCTGAAAGAGATGGCAATGAGACGGCTCCTGA...CGCCCTCTTTCTACACAGCAGAGTGTGCATGGCAAGGAAATGAGTCACCTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS TCA 90 bp GGAGTTCAGAAGGGGCTGTGGATACACATTTCCTGCAGAGGCCTGTaGCGGCATCTTCACAGGTCCTTTATAGCTGCCCTCAATACATTT +
Preference number: 5 (lower is better)
Translates to: GVQKGLWIHISCRGL*RHLHRSFIAALNTF
Trigger: AAATGTATTGAGGGCAGCTATAAAGGACCTGTGAAGATGCCGTCACAGGCCTCTGCAGGAAATGTGTATCCACAGCCCCTTCTGAACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS CCA 90 bp TGTGGTTCACAGGGACACAGTGATCATTGCACCAGTGGCAGTCATTaGTATTGGCTGTGCAGCTGTAACAATCTGTGTGCTGGTCACATC +
Preference number: 5 (lower is better)
Translates to: CGSQGHSDHCTSGSH*YWLCSCNNLCAGHI
Trigger: GATGTGACCAGCACACAGATTGTTACAGCTGCACAGCCAATACCAATGACTGCCACTGGTGCAATGATCACTGTGTCCCTGTGAACCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS CCA 90 bp TTTTCCTTTCCCAGTATTGCTAGGATCAGTACACCAACCACAGCCTaGCTGCTCCAAGCAATGGCTGCAGGTACAGTAGCCAGAGCAATT +
Preference number: 5 (lower is better)
Translates to: FSFPSIARISTPTTA*LLQAMAAGTVARAI
Trigger: AATTGCTCTGGCTACTGTACCTGCAGCCATTGCTTGGAGCAGCCAGGCTGTGGTTGGTGTACTGATCCTAGCAATACTGGGAAAGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS GCA 90 bp ACTCCCCTTTCCAGTTTTCAGAACATTCACACTCAACAGCGCTGCTaGTGTTACTGCTCTTACACTCTCCTCGGCCTGAGCAATTATTCG +
Preference number: 5 (lower is better)
Translates to: TPLSSFQNIHTQQRC*CYCSYTLLGLSNYS
Trigger: CGAATAATTGCTCAGGCCGAGGAGAGTGTAAGAGCAGTAACAGCAGCAGCGCTGTTGAGTGTGAATGTTCTGAAAACTGGAAAGGGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS GCA 90 bp ACGACTCCCCTTTCCAGTTTTCAGAACATTCACACTCAACAGCGCTaGTGCTGTTACTGCTCTTACACTCTCCTCGGCCTGAGCAATTAT +
Preference number: 5 (lower is better)
Translates to: TTPLSSFQNIHTQQR*CCYCSYTLLGLSNY
Trigger: ATAATTGCTCAGGCCGAGGAGAGTGTAAGAGCAGTAACAGCAGCAGCGCTGTTGAGTGTGAATGTTCTGAAAACTGGAAAGGGGAGTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS GCA 90 bp AATGGTCCACATCTGAGTATCCACATCGTATCTGTAGAGGTCATCTaGAAGCCGGTATTTGTTGGCGCTGAAAGCCTTGTAGCCACCATG +
Preference number: 5 (lower is better)
Translates to: NGPHLSIHIVSVEVI*KPVFVGAESLVATM
Trigger: CATGGTGGCTACAAGGCTTTCAGCGCCAACAAATACCGGCTTGCAGATGACCTCTACAGATACGATGTGGATACTCAGATGTGGACCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS CCA 90 bp TCCTGCAGCTGGTTTTCTTATTGCAGTAGTACATGGGGTTATCCTTaGGGCAACTCTCATACTTGGCAATGGAGATCTGGCCTTCTGTGC +
Preference number: 5 (lower is better)
Translates to: SCSWFSYCSSTWGYP*GNSHTWQWRSGLLC
Trigger: GCACAGAAGGCCAGATCTCCATTGCCAAGTATGAGAGTTGCCCCAAGGATAACCCCATGTACTACTGCAATAAGAAAACCAGCTGCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CAA 90 bp ACAGGGTCAGCATTTCAGATTCCTTCAGGGAGCCAAGGCCACCCTAGGAAGAACTGGTCACGTTCCCTGTaGAATCAATTTTTCCTCCAT +
Preference number: 5 (lower is better)
Translates to: TGSAFQIPSGSQGHPRKNWSRSL*NQFFLH
Trigger: ATGGAGGAAAAATTGATTCAACAGGGAACGTGACCA...GTTCTTCCTAGGGTGGCCTTGGCTCCCTGAAGGAATCTGAAATGCTGACCCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CAA 90 bp CTTCATCCAATTCCCCAACGAGATCCCATCTTACACTTCAAGCTTTCCAGATATCTGAGGAGGAGGCTGTaGAAGCCGCCGAACACATAC +
Preference number: 5 (lower is better)
Translates to: LHPIPQRDPILHFKLSRYLRRRL*KPPNTY
Trigger: GTATGTGTTCGGCGGCTTCAACAGCCTCCTCCTCAG...ATATCTGGAAAGCTTGAAGTGTAAGATGGGATCTCGTTGGGGAATTGGATGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CAA 90 bp GTGAGGCTGCTGCATAATGCCAGAATACGGAGCACCATAAATGGGGAAATGCAAACCAAATGCCAGCCATaGCCACAGATATTTTCCGGC +
Preference number: 5 (lower is better)
Translates to: VRLLHNARIRSTINGEMQTKCQP*PQIFSG
Trigger: GCCGGAAAATATCTGTGGCAATGGCTGGCATTTGGT...TTGCATTTCCCCATTTATGGTGCTCCGTATTCTGGCATTATGCAGCAGCCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS GCA 90 bp TTCTCCTTAGCAGTAGTGATTTTCAGACACGAGTTTCCAACCAAATaGCAGCCATTGCCACAGATATTTTCCGGCAGGGCGATGCACTCT +
Preference number: 5 (lower is better)
Translates to: FSLAVVIFRHEFPTK*QPLPQIFSGRAMHS
Trigger: AGAGTGCATCGCCCTGCCGGAAAATATCTGTGGCAATGGCTGGCATTTGGTTGGAAACTCGTGTCTGAAAATCACTACTGCTAAGGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS CCA 90 bp ATCACTGGGCTCAGATGGCATCCACTGCAGCAAACTATTTGTGAATaGAGACATATCCTCCCAGCACCAGTAAGACACATTGATCTTCCG +
Preference number: 5 (lower is better)
Translates to: ITGLRWHPLQQTICE*RHILPAPVRHIDLP
Trigger: CGGAAGATCAATGTGTCTTACTGGTGCTGGGAGGATATGTCTCCATTCACAAATAGTTTGCTGCAGTGGATGCCATCTGAGCCCAGTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CAA 90 bp AGGTGTGTGAGGCTGCTGCATAATGCCAGAATACGGAGCACCATAAATGGGGAAAATACTCTCAGCTCATaGGTCACGTTCCCTGTTGAA +
Preference number: 5 (lower is better)
Translates to: RCVRLLHNARIRSTINGENTLSS*VTFPVE
Trigger: TTCAACAGGGAACGTGACCAATGAGCTGAGAGTATT...TTCCCCATTTATGGTGCTCCGTATTCTGGCATTATGCAGCAGCCTCACACACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CAA 90 bp ACGAGATCCCATCTTACACTTCAAGCTTTCCAGATATTCTGGTATTTTCCTTTTCAGGTCTCGCAGTGCTaGCCCGTGGTCAGGTCCTCA +
Preference number: 5 (lower is better)
Translates to: TRSHLTLQAFQIFWYFPFQVSQC*PVVRSS
Trigger: TGAGGACCTGACCACGGGCAAGCACTGCGAGACCTG...AAAAGGAAAATACCAGAATATCTGGAAAGCTTGAAGTGTAAGATGGGATCTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS CCA 90 bp CTTTTCCAAGTCATATTCCTGCACAACGCTTATATATCCATAGAGTaGGCAATGACCGAAGATGACCAACATGACCACACGGCCAGATGC +
Preference number: 5 (lower is better)
Translates to: LFQVIFLHNAYISIE*AMTEDDQHDHTARC
Trigger: GCATCTGGCCGTGTGGTCATGTTGGTCATCTTCGGTCATTGCCCACTCTATGGATATATAAGCGTTGTGCAGGAATATGACTTGGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS CCA 90 bp GATTGCATTAATCGAAGCTGCTTAAGGACAAACTCCACCTTCTTCTaGGATGTGAGGGAAGCCAAAAAGGCATTGTGGTTCCTACAGGAC +
Preference number: 5 (lower is better)
Translates to: DCINRSCLRTNSTFF*DVREAKKALWFLQD
Trigger: GTCCTGTAGGAACCACAATGCCTTTTTGGCTTCCCTCACATCCCAGAAGAAGGTGGAGTTTGTCCTTAAGCAGCTTCGATTAATGCAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CAA 90 bp CTTCATCCAATTCCCCAACGAGATCCCATCTTACACTTCAAGCTTTCCAGATATTCTGAGGAGAAGCATTaGGCACCGTGGCTCATGGAA +
Preference number: 5 (lower is better)
Translates to: LHPIPQRDPILHFKLSRYSEEKH*APWLME
Trigger: TTCCATGAGCCACGGTGCCAAATGCTTCTCCTCAGA...ATATCTGGAAAGCTTGAAGTGTAAGATGGGATCTCGTTGGGGAATTGGATGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CAA 90 bp CTTCATCCAATTCCCCAACGAGATCCCATCTTACACTTCAAGCTTTCCAGATATCTGCTTGTTCTTCAGTaGCCAACTCCCAGGAGGTAC +
Preference number: 5 (lower is better)
Translates to: LHPIPQRDPILHFKLSRYLLVLQ*PTPRRY
Trigger: GTACCTCCTGGGAGTTGGCAACTGAAGAACAAGCAG...ATATCTGGAAAGCTTGAAGTGTAAGATGGGATCTCGTTGGGGAATTGGATGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CAA 90 bp AAGGAGGTGACTCATTTCCTTGCCATGCACACTCTGCTGTGTAGAAAGAGGGCGGTGATGTTTGGATGGTaGCGAAAATCAAATTTCTCA +
Preference number: 5 (lower is better)
Translates to: KEVTHFLAMHTLLCRKRAVMFGW*RKSNFS
Trigger: TGAGAAATTTGATTTTCGCAACCATCCAAACATCAC...CGCCCTCTTTCTACACAGCAGAGTGTGCATGGCAAGGAAATGAGTCACCTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CAA 90 bp ACGAGATCCCATCTTACACTTCAAGCTTTCCAGATATTCTGGTATTTTCCTTTTGCGGCTGGCCATCTGTaGCATCTCCCGAAGAAGTTG +
Preference number: 5 (lower is better)
Translates to: TRSHLTLQAFQIFWYFPFAAGHL*HLPKKL
Trigger: CAACTTCTTCGGGAGATGCAACAGATGGCCAGCCGC...AAAAGGAAAATACCAGAATATCTGGAAAGCTTGAAGTGTAAGATGGGATCTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CAA 90 bp CTTCATCCAATTCCCCAACGAGATCCCATCTTACACTTCAAGCTTTCCAGATATGCTCCTGACTTCTCCTaGTACACTATTGGCATCTGC +
Preference number: 5 (lower is better)
Translates to: LHPIPQRDPILHFKLSRYAPDFS*YTIGIC
Trigger: GCAGATGCCAATAGTGTACAAGGAGAAGTCAGGAGC...ATATCTGGAAAGCTTGAAGTGTAAGATGGGATCTCGTTGGGGAATTGGATGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CAA 90 bp CTACAGTATAGTTATGTACAAGTGCAAGAGGTCAGTGTCGTCATGACTATTTTACATTTGCTGTGTCCGTaGCACTGGCAAGCTGGACAG +
Preference number: 5 (lower is better)
Translates to: LQYSYVQVQEVSVVMTILHLLCP*HWQAGQ
Trigger: CTGTCCAGCTTGCCAGTGCAACGGACACAGCAAATG...TAAAATAGTCATGACGACACTGACCTCTTGCACTTGTACATAACTATACTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS TCA 90 bp CTCAACAGCGCTGCTGCTGTTACTGCTCTTACACTCTCCTCGGCCTaGGCAATTATTCGGACACATGTCAAAATTGTAAGTGATATTAAA +
Preference number: 5 (lower is better)
Translates to: LNSAAAVTALTLSSA*AIIRTHVKIVSDIK
Trigger: TTTAATATCACTTACAATTTTGACATGTGTCCGAATAATTGCTCAGGCCGAGGAGAGTGTAAGAGCAGTAACAGCAGCAGCGCTGTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS TCA 90 bp TTTCTCATTAGAGAAGCTATCTTTGTATTCCTTGATGTTGGTTTTTaGAACAACAGGCACCTCTTCTCCAGTCTGGGTTCCGGCTGGGAA +
Preference number: 5 (lower is better)
Translates to: FLIREAIFVFLDVGF*NNRHLFSSLGSGWE
Trigger: TTCCCAGCCGGAACCCAGACTGGAGAAGAGGTGCCTGTTGTTTCAAAAACCAACATCAAGGAATACAAAGATAGCTTCTCTAATGAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CAA 90 bp ACGAGATCCCATCTTACACTTCAAGCTTTCCAGATATTCTGGTATTTTCCTTTTGGGCAACTCTCATACTaGGCAATGGAGATCTGGCCT +
Preference number: 5 (lower is better)
Translates to: TRSHLTLQAFQIFWYFPFGQLSY*AMEIWP
Trigger: AGGCCAGATCTCCATTGCCAAGTATGAGAGTTGCCC...AAAAGGAAAATACCAGAATATCTGGAAAGCTTGAAGTGTAAGATGGGATCTCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CAA 90 bp CAATACTTACTCCATATTTACACAAGTGCGACAGATGCTAAATCACACATAGTAAAGCACTTGCCGGTGTaGGTGTTGCACAGTGATGCG +
Preference number: 5 (lower is better)
Translates to: QYLLHIYTSATDAKSHIVKHLPV*VLHSDA
Trigger: CGCATCACTGTGCAACACCAACACCGGCAAGTGCTT...TACTATGTGTGATTTAGCATCTGTCGCACTTGTGTAAATATGGAGTAAGTATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CAA 90 bp CTTCATCCAATTCCCCAACGAGATCCCATCTTACACTTCAAGCTTTCCAGATATTCTCCTTGTACACTATaGGCATCTGCTGAGAAATGT +
Preference number: 5 (lower is better)
Translates to: LHPIPQRDPILHFKLSRYSPCTL*ASAEKC
Trigger: ACATTTCTCAGCAGATGCCAATAGTGTACAAGGAGA...ATATCTGGAAAGCTTGAAGTGTAAGATGGGATCTCGTTGGGGAATTGGATGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS TCA 90 bp TATCCGCCAACAACCCACATTATATTTCCATTGACCACAGCTTTATaGGAGGCTCTGGGAAGCTTTAAATCAGAATATTCTTCTCGAGTC +
Preference number: 5 (lower is better)
Translates to: YPPTTHIIFPLTTAL*EALGSFKSEYSSRV
Trigger: GACTCGAGAAGAATATTCTGATTTAAAGCTTCCCAGAGCCTCTCATAAAGCTGTGGTCAATGGAAATATAATGTGGGTTGTTGGCGGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CAA 90 bp CAATACTTACTCCATATTTACACAAGTGCGACAGATGCTAAATCACACATAGTAGTGGCCCAGGTGATGTaGAGGTTGAAGTTTTTGGAG +
Preference number: 5 (lower is better)
Translates to: QYLLHIYTSATDAKSHIVVAQVM*RLKFLE
Trigger: CTCCAAAAACTTCAACCTCAACATCACCTGGGCCAC...TACTATGTGTGATTTAGCATCTGTCGCACTTGTGTAAATATGGAGTAAGTATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS-3UTR CAA 90 bp ACGAGATCCCATCTTACACTTCAAGCTTTCCAGATATTCTGGTATTTTCCTTTTGAAGCCAAAAAGGCATaGTGGTTCCTACAGGACAAT +
Preference number: 5 (lower is better)
Translates to: TRSHLTLQAFQIFWYFPFEAKKA*WFLQDN
Trigger: ATTGTCCTGTAGGAACCACAATGCCTTTTTGGCTTC...AAAAGGAAAATACCAGAATATCTGGAAAGCTTGAAGTGTAAGATGGGATCTCGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS CCA 90 bp ACAATACCCATGATTCATTATGAATATGAAATACTCTCAGCTCATTaGTCACGTTCCCTGTTGAATCAATTTTTCCTCCATACATGTAGA +
Preference number: 5 (lower is better)
Translates to: TIPMIHYEYEILSAH*SRSLLNQFFLHTCR
Trigger: TCTACATGTATGGAGGAAAAATTGATTCAACAGGGAACGTGACCAATGAGCTGAGAGTATTTCATATTCATAATGAATCATGGGTATTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS GCA 72 bp GGGCGCGCGGTCCCGGCCTCCAGGCCCCTGTCGCGGTaGAGGGTCGGTGCTGCCTGCCCTTCCTGCCCGCAG +
Preference number: 6 (lower is better)
Translates to: GRAVPASRPLSR*RVGAACPSCPQ
Trigger: CTGCGGGCAGGAAGGGCAGGCAGCACCGACCCTGCACCGCGACAGGGGCCTGGAGGCCGGGACCGCGCGCCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS GCA 72 bp TGCCCTTCCTGCCCGCAGGCGCTGCTGTCGCCGTCGTaGTCCCCCTCAGCCGCGCCTCAGTCGCCGCCGCCG +
Preference number: 6 (lower is better)
Translates to: CPSCPQALLSPS*SPSAAPQSPPP
Trigger: CGGCGGCGGCGACTGAGGCGCGGCTGAGGGGGAGCACGACGGCGACAGCAGCGCCTGCGGGCAGGAAGGGCA
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS GCA 72 bp GGCCTCCAGGCCCCTGTCGCGGTGCAGGGTCGGTGCTaGCTGCCCTTCCTGCCCGCAGGCGCTGCTGTCGCC +
Preference number: 6 (lower is better)
Translates to: GLQAPVAVQGRC*LPFLPAGAAVA
Trigger: GGCGACAGCAGCGCCTGCGGGCAGGAAGGGCAGGCAGCACCGACCCTGCACCGCGACAGGGGCCTGGAGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS GCA 72 bp TCCAGGCCCCTGTCGCGGTGCAGGGTCGGTGCTGCCTaGCCTTCCTGCCCGCAGGCGCTGCTGTCGCCGTCG +
Preference number: 6 (lower is better)
Translates to: SRPLSRCRVGAA*PSCPQALLSPS
Trigger: CGACGGCGACAGCAGCGCCTGCGGGCAGGAAGGGCAGGCAGCACCGACCCTGCACCGCGACAGGGGCCTGGA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS CAA 90 bp TCGCCCACCCAGCCCGTGGGGCAGACGCACTGGCCGGTGCCAGGGTaGCAGCGGCCGCCGTTGACACACGGCCGGTCACATTCCTTGGCC +
Preference number: 6 (lower is better)
Translates to: SPTQPVGQTHWPVPG*QRPPLTHGRSHSLA
Trigger: GGCCAAGGAATGTGACCGGCCGTGTGTCAACGGCGGCCGCTGCAACCCTGGCACCGGCCAGTGCGTCTGCCCCACGGGCTGGGTGGGCGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS CCA 72 bp CATTGCTCGCCCACCCAGCCCGTGGGGCAGACGCACTaGCCGGTGCCAGGGTTGCAGCGGCCGCCGTTGACA +
Preference number: 6 (lower is better)
Translates to: HCSPTQPVGQTH*PVPGLQRPPLT
Trigger: TGTCAACGGCGGCCGCTGCAACCCTGGCACCGGCCAGTGCGTCTGCCCCACGGGCTGGGTGGGCGAGCAATG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS CCA 72 bp GCTAGTGCACTCGCCACACGCTGTCCGCAGGGCACATaGTGTCCGGCACTGCTTGGCACTGTGGTTTGCAGG +
Preference number: 6 (lower is better)
Translates to: ASALATRCPQGT*CPALLGTVVCR
Trigger: CCTGCAAACCACAGTGCCAAGCAGTGCCGGACACCATGTGCCCTGCGGACAGCGTGTGGCGAGTGCACTAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS CCA 72 bp ACGCTGTCCGCAGGGCACATGGTGTCCGGCACTGCTTaGCACTGTGGTTTGCAGGCCTTTCACAGACGCTGC +
Preference number: 6 (lower is better)
Translates to: TLSAGHMVSGTA*HCGLQAFHRRC
Trigger: GCAGCGTCTGTGAAAGGCCTGCAAACCACAGTGCCAAGCAGTGCCGGACACCATGTGCCCTGCGGACAGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS CAA 72 bp CACGCTGTCCGCAGGGCACATGGTGTCCGGCACTGCTaGGCACTGTGGTTTGCAGGCCTTTCACAGACGCTG +
Preference number: 6 (lower is better)
Translates to: HAVRRAHGVRHC*ALWFAGLSQTL
Trigger: CAGCGTCTGTGAAAGGCCTGCAAACCACAGTGCCAAGCAGTGCCGGACACCATGTGCCCTGCGGACAGCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS GCA 72 bp GGGCGGCTGGCCATCTGTTGCATCTCCCGAAGAAGTTaGTCTCTCCGCCTGGATGCCCAACAGCTCTGCTTG +
Preference number: 6 (lower is better)
Translates to: GRLAICCISRRS*SLRLDAQQLCL
Trigger: CAAGCAGAGCTGTTGGGCATCCAGGCGGAGAGAGCAACTTCTTCGGGAGATGCAACAGATGGCCAGCCGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS CAA 72 bp GGGGCGGCTGGCCATCTGTTGCATCTCCCGAAGAAGTaGCTCTCTCCGCCTGGATGCCCAACAGCTCTGCTT +
Preference number: 6 (lower is better)
Translates to: GAAGHLLHLPKK*LSPPGCPTALL
Trigger: AAGCAGAGCTGTTGGGCATCCAGGCGGAGAGAGCAACTTCTTCGGGAGATGCAACAGATGGCCAGCCGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS GCA 72 bp CTGTGTGTCCCACAGACACCGGATACCAGGTCCTGCTaGCACACAAGCAGCTTCACTGCGGTGTGCATCGCA +
Preference number: 6 (lower is better)
Translates to: LCVPQTPDTRSC*HTSSFTAVCIA
Trigger: TGCGATGCACACCGCAGTGAAGCTGCTTGTGTGGCAGCAGGACCTGGTATCCGGTGTCTGTGGGACACACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS GCA 72 bp CGACTGTGTGTCCCACAGACACCGGATACCAGGTCCTaGTGCCACACAAGCAGCTTCACTGCGGTGTGCATC +
Preference number: 6 (lower is better)
Translates to: RLCVPQTPDTRS*CHTSSFTAVCI
Trigger: GATGCACACCGCAGTGAAGCTGCTTGTGTGGCAGCAGGACCTGGTATCCGGTGTCTGTGGGACACACAGTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS GCA 72 bp AGGTCCTGCTGCCACACAAGCAGCTTCACTGCGGTGTaGATCGCACTGCTCCGAGGTAAAGACCAAGACGTC +
Preference number: 6 (lower is better)
Translates to: RSCCHTSSFTAV*IALLRGKDQDV
Trigger: GACGTCTTGGTCTTTACCTCGGAGCAGTGCGATGCACACCGCAGTGAAGCTGCTTGTGTGGCAGCAGGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS GCA 72 bp GCCAGCCATTGCCACAGATATTTTCCGGCAGGGCGATaGACTCTTGATTCCGGGGCTCCCACTGGCAGTTCT +
Preference number: 6 (lower is better)
Translates to: ASHCHRYFPAGR*TLDSGAPTGSS
Trigger: AGAACTGCCAGTGGGAGCCCCGGAATCAAGAGTGCATCGCCCTGCCGGAAAATATCTGTGGCAATGGCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS CCA 72 bp CTATTGGCATCTGCTGAGAAATGTCCACCAGGGCACTaGCCACAGCGAGACCTGACTGACCAGGAGGAGGGA +
Preference number: 6 (lower is better)
Translates to: LLASAEKCPPGH*PQRDLTDQEEG
Trigger: TCCCTCCTCCTGGTCAGTCAGGTCTCGCTGTGGCCAGTGCCCTGGTGGACATTTCTCAGCAGATGCCAATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS CAA 90 bp AGCTGGCACTCGTCCCCCTTGACACCTTTGGTGGTACAGAAGCACTaGCCGGTGTTGGTGTTGCACAGTGATGCGTGCCCATTGCACTTG +
Preference number: 6 (lower is better)
Translates to: SWHSSPLTPLVVQKH*PVLVLHSDACPLHL
Trigger: CAAGTGCAATGGGCACGCATCACTGTGCAACACCAACACCGGCAAGTGCTTCTGTACCACCAAAGGTGTCAAGGGGGACGAGTGCCAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS GCA 72 bp CAGTCCTCGAGGGAGCCTCACGAATACAGAGAGGACTaGGGCTTTGTTACCAAAGCAGGGCTCCAGGGCAAT +
Preference number: 6 (lower is better)
Translates to: QSSREPHEYRED*GFVTKAGLQGN
Trigger: ATTGCCCTGGAGCCCTGCTTTGGTAACAAAGCCGCAGTCCTCTCTGTATTCGTGAGGCTCCCTCGAGGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS CAA 72 bp TCGTCCCCCTTGACACCTTTGGTGGTACAGAAGCACTaGCCGGTGTTGGTGTTGCACAGTGATGCGTGCCCA +
Preference number: 6 (lower is better)
Translates to: SSPLTPLVVQKH*PVLVLHSDACP
Trigger: TGGGCACGCATCACTGTGCAACACCAACACCGGCAAGTGCTTCTGTACCACCAAAGGTGTCAAGGGGGACGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS GCA 72 bp TACACCAACCACAGCCTGGCTGCTCCAAGCAATGGCTaGAGGTACAGTAGCCAGAGCAATTTTCAGGTGGGC +
Preference number: 6 (lower is better)
Translates to: YTNHSLAAPSNG*RYSSQSNFQVG
Trigger: GCCCACCTGAAAATTGCTCTGGCTACTGTACCTGCAGCCATTGCTTGGAGCAGCCAGGCTGTGGTTGGTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS CCA 72 bp CCCAGTATTGCTAGGATCAGTACACCAACCACAGCCTaGCTGCTCCAAGCAATGGCTGCAGGTACAGTAGCC +
Preference number: 6 (lower is better)
Translates to: PSIARISTPTTA*LLQAMAAGTVA
Trigger: GGCTACTGTACCTGCAGCCATTGCTTGGAGCAGCCAGGCTGTGGTTGGTGTACTGATCCTAGCAATACTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS CCA 72 bp TTGGTTTTTGAAACAACAGGCACCTCTTCTCCAGTCTaGGTTCCGGCTGGGAAGCTGGTGGCCCAGGTGATG +
Preference number: 6 (lower is better)
Translates to: LVFETTGTSSPV*VPAGKLVAQVM
Trigger: CATCACCTGGGCCACCAGCTTCCCAGCCGGAACCCAGACTGGAGAAGAGGTGCCTGTTGTTTCAAAAACCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS CAA 72 bp ACCTCACATAGCTGGCACTCGTCCCCCTTGACACCTTaGGTGGTACAGAAGCACTTGCCGGTGTTGGTGTTG +
Preference number: 6 (lower is better)
Translates to: TSHSWHSSPLTP*VVQKHLPVLVL
Trigger: CAACACCAACACCGGCAAGTGCTTCTGTACCACCAAAGGTGTCAAGGGGGACGAGTGCCAGCTATGTGAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS CAA 90 bp GCACTGTGGTTTGCAGGCCTTTCACAGACGCTGCCATTGAGAGGGTaGATGCAGGTTGCAGCCTTTAATCCCCGAGTACTAGGCTCTGAC +
Preference number: 6 (lower is better)
Translates to: ALWFAGLSQTLPLRG*MQVAAFNPRVLGSD
Trigger: GTCAGAGCCTAGTACTCGGGGATTAAAGGCTGCAACCTGCATCAACCCTCTCAATGGCAGCGTCTGTGAAAGGCCTGCAAACCACAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS TCA 72 bp AAGGGGCTGTGGATACACATTTCCTGCAGAGGCCTGTaGCGGCATCTTCACAGGTCCTTTATAGCTGCCCTC +
Preference number: 6 (lower is better)
Translates to: KGLWIHISCRGL*RHLHRSFIAAL
Trigger: GAGGGCAGCTATAAAGGACCTGTGAAGATGCCGTCACAGGCCTCTGCAGGAAATGTGTATCCACAGCCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS TCA 72 bp GCTCCTGACTTCTCCTTGTACACTATTGGCATCTGCTaGGAAATGTCCACCAGGGCACTGGCCACAGCGAGA +
Preference number: 6 (lower is better)
Translates to: APDFSLYTIGIC*EMSTRALATAR
Trigger: TCTCGCTGTGGCCAGTGCCCTGGTGGACATTTCTCAGCAGATGCCAATAGTGTACAAGGAGAAGTCAGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS GCA 72 bp CACCATAGAAGCCAGATATGCAGGTCTCGCAGTGCTTaGCCGTGGTCAGGTCCTCACACTTCTCACAGATAC +
Preference number: 6 (lower is better)
Translates to: HHRSQICRSRSA*PWSGPHTSHRY
Trigger: GTATCTGTGAGAAGTGTGAGGACCTGACCACGGGCAAGCACTGCGAGACCTGCATATCTGGCTTCTATGGTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS GCA 72 bp CTTTGGTGGTACAGAAGCACTTGCCGGTGTTGGTGTTaGACAGTGATGCGTGCCCATTGCACTTGCATGGCT +
Preference number: 6 (lower is better)
Translates to: LWWYRSTCRCWC*TVMRAHCTCMA
Trigger: AGCCATGCAAGTGCAATGGGCACGCATCACTGTGCAACACCAACACCGGCAAGTGCTTCTGTACCACCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS CCA 72 bp AGAAGCCAGATATGCAGGTCTCGCAGTGCTTGCCCGTaGTCAGGTCCTCACACTTCTCACAGATACTCTGGT +
Preference number: 6 (lower is better)
Translates to: RSQICRSRSACP*SGPHTSHRYSG
Trigger: ACCAGAGTATCTGTGAGAAGTGTGAGGACCTGACCACGGGCAAGCACTGCGAGACCTGCATATCTGGCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS CAA 72 bp GCACTGTGGTTTGCAGGCCTTTCACAGACGCTGCCATaGAGAGGGTTGATGCAGGTTGCAGCCTTTAATCCC +
Preference number: 6 (lower is better)
Translates to: ALWFAGLSQTLP*RGLMQVAAFNP
Trigger: GGGATTAAAGGCTGCAACCTGCATCAACCCTCTCAATGGCAGCGTCTGTGAAAGGCCTGCAAACCACAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS CAA 72 bp CGATTTTCTACCTCACATAGCTGGCACTCGTCCCCCTaGACACCTTTGGTGGTACAGAAGCACTTGCCGGTG +
Preference number: 6 (lower is better)
Translates to: RFSTSHSWHSSP*TPLVVQKHLPV
Trigger: CACCGGCAAGTGCTTCTGTACCACCAAAGGTGTCAAGGGGGACGAGTGCCAGCTATGTGAGGTAGAAAATCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS CAA 90 bp CACTGCTCCGAGGTAAAGACCAAGACGTCACTGAGGAGGAGGCTGTaGAAGCCGCCGAACACATACATGGTGCTGTTGTACAAGACTGCT +
Preference number: 6 (lower is better)
Translates to: HCSEVKTKTSLRRRL*KPPNTYMVLLYKTA
Trigger: AGCAGTCTTGTACAACAGCACCATGTATGTGTTCGGCGGCTTCAACAGCCTCCTCCTCAGTGACGTCTTGGTCTTTACCTCGGAGCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS CAA 90 bp CACTGCTTGGCACTGTGGTTTGCAGGCCTTTCACAGACGCTGCCATaGAGAGGGTTGATGCAGGTTGCAGCCTTTAATCCCCGAGTACTA +
Preference number: 6 (lower is better)
Translates to: HCLALWFAGLSQTLP*RGLMQVAAFNPRVL
Trigger: TAGTACTCGGGGATTAAAGGCTGCAACCTGCATCAACCCTCTCAATGGCAGCGTCTGTGAAAGGCCTGCAAACCACAGTGCCAAGCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS TCA 72 bp TGGCCTTCTGTGCAGCTGTGGTTCACAGGGACACAGTaGTCATTGCACCAGTGGCAGTCATTGGTATTGGCT +
Preference number: 6 (lower is better)
Translates to: WPSVQLWFTGTQ*SLHQWQSLVLA
Trigger: AGCCAATACCAATGACTGCCACTGGTGCAATGATCACTGTGTCCCTGTGAACCACAGCTGCACAGAAGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS TCA 72 bp GATTTTCTACCTCACATAGCTGGCACTCGTCCCCCTTaGCACCTTTGGTGGTACAGAAGCACTTGCCGGTGT +
Preference number: 6 (lower is better)
Translates to: DFLPHIAGTRPP*HLWWYRSTCRC
Trigger: ACACCGGCAAGTGCTTCTGTACCACCAAAGGTGTCAAGGGGGACGAGTGCCAGCTATGTGAGGTAGAAAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS TCA 72 bp TGCAGGCGGCTGCTGCTTCCGGTTTCTTACAGCTCCTaGCTTCTCCTTGTACACTATTGGCATCTGCTGAGA +
Preference number: 6 (lower is better)
Translates to: CRRLLLPVSYSS*LLLVHYWHLLR
Trigger: TCTCAGCAGATGCCAATAGTGTACAAGGAGAAGTCAGGAGCTGTAAGAAACCGGAAGCAGCAGCCGCCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS GCA 72 bp AGCAGGAGCACCCTCTGGTATCGCTTGCATTACAGATaGCTCGGTGAGGAAAGCCACAGTTGTCTGTACAGT +
Preference number: 6 (lower is better)
Translates to: SRSTLWYRLHYR*LGEESHSCLYS
Trigger: ACTGTACAGACAACTGTGGCTTTCCTCACCGAGGCATCTGTAATGCAAGCGATACCAGAGGGTGCTCCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS CCA 72 bp CCCGTGGTCAGGTCCTCACACTTCTCACAGATACTCTaGTTGATGCATTTGCTGTGTCCGTTGCACTGGCAA +
Preference number: 6 (lower is better)
Translates to: PVVRSSHFSQIL*LMHLLCPLHWQ
Trigger: TTGCCAGTGCAACGGACACAGCAAATGCATCAACCAGAGTATCTGTGAGAAGTGTGAGGACCTGACCACGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS CAA 72 bp GAGGTAAAGACCAAGACGTCACTGAGGAGGAGGCTGTaGAAGCCGCCGAACACATACATGGTGCTGTTGTAC +
Preference number: 6 (lower is better)
Translates to: EVKTKTSLRRRL*KPPNTYMVLLY
Trigger: GTACAACAGCACCATGTATGTGTTCGGCGGCTTCAACAGCCTCCTCCTCAGTGACGTCTTGGTCTTTACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS CAA 72 bp TTGACACCTTTGGTGGTACAGAAGCACTTGCCGGTGTaGGTGTTGCACAGTGATGCGTGCCCATTGCACTTG +
Preference number: 6 (lower is better)
Translates to: LTPLVVQKHLPV*VLHSDACPLHL
Trigger: CAAGTGCAATGGGCACGCATCACTGTGCAACACCAACACCGGCAAGTGCTTCTGTACCACCAAAGGTGTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS CAA 90 bp CGATTTTCTACCTCACATAGCTGGCACTCGTCCCCCTTGACACCTTaGGTGGTACAGAAGCACTTGCCGGTGTTGGTGTTGCACAGTGAT +
Preference number: 6 (lower is better)
Translates to: RFSTSHSWHSSPLTP*VVQKHLPVLVLHSD
Trigger: ATCACTGTGCAACACCAACACCGGCAAGTGCTTCTGTACCACCAAAGGTGTCAAGGGGGACGAGTGCCAGCTATGTGAGGTAGAAAATCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS CAA 90 bp GTCTGGGTTCCGGCTGGGAAGCTGGTGGCCCAGGTGATGTTGAGGTaGAAGTTTTTGGAGGCATTGATGAACATGTCCAAATCCCTGTTT +
Preference number: 6 (lower is better)
Translates to: VWVPAGKLVAQVMLR*KFLEALMNMSKSLF
Trigger: AAACAGGGATTTGGACATGTTCATCAATGCCTCCAAAAACTTCAACCTCAACATCACCTGGGCCACCAGCTTCCCAGCCGGAACCCAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS TCA 72 bp TGTAGAGGTCATCTGCAAGCCGGTATTTGTTGGCGCTaGAAGCCTTGTAGCCACCATGAACGTACAGAGCCT +
Preference number: 6 (lower is better)
Translates to: CRGHLQAGICWR*KPCSHHERTEP
Trigger: AGGCTCTGTACGTTCATGGTGGCTACAAGGCTTTCAGCGCCAACAAATACCGGCTTGCAGATGACCTCTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS GCA 72 bp TCCAGTTTTCAGAACATTCACACTCAACAGCGCTGCTaGTGTTACTGCTCTTACACTCTCCTCGGCCTGAGC +
Preference number: 6 (lower is better)
Translates to: SSFQNIHTQQRC*CYCSYTLLGLS
Trigger: GCTCAGGCCGAGGAGAGTGTAAGAGCAGTAACAGCAGCAGCGCTGTTGAGTGTGAATGTTCTGAAAACTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS CCA 72 bp AGTACATGGGGTTATCCTTGGGGCAACTCTCATACTTaGCAATGGAGATCTGGCCTTCTGTGCAGCTGTGGT +
Preference number: 6 (lower is better)
Translates to: STWGYPWGNSHT*QWRSGLLCSCG
Trigger: ACCACAGCTGCACAGAAGGCCAGATCTCCATTGCCAAGTATGAGAGTTGCCCCAAGGATAACCCCATGTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS TCA 72 bp CCATCGGTCACAAGCAATGTCATAAGCCATGAAGTCTaGGGAGAAGCATTTGGCACCGTGGCTCATGGAAGT +
Preference number: 6 (lower is better)
Translates to: PSVTSNVISHEV*GEAFGTVAHGS
Trigger: ACTTCCATGAGCCACGGTGCCAAATGCTTCTCCTCAGACTTCATGGCTTATGACATTGCTTGTGACCGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS GCA 72 bp CAGAACATTCACACTCAACAGCGCTGCTGCTGTTACTaGTCTTACACTCTCCTCGGCCTGAGCAATTATTCG +
Preference number: 6 (lower is better)
Translates to: QNIHTQQRCCCY*SYTLLGLSNYS
Trigger: CGAATAATTGCTCAGGCCGAGGAGAGTGTAAGAGCAGTAACAGCAGCAGCGCTGTTGAGTGTGAATGTTCTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS GCA 72 bp CTTTCCAGTTTTCAGAACATTCACACTCAACAGCGCTaGTGCTGTTACTGCTCTTACACTCTCCTCGGCCTG +
Preference number: 6 (lower is better)
Translates to: LSSFQNIHTQQR*CCYCSYTLLGL
Trigger: CAGGCCGAGGAGAGTGTAAGAGCAGTAACAGCAGCAGCGCTGTTGAGTGTGAATGTTCTGAAAACTGGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS GCA 72 bp GCAGTAGTGATTTTCAGACACGAGTTTCCAACCAAATaGCAGCCATTGCCACAGATATTTTCCGGCAGGGCG +
Preference number: 6 (lower is better)
Translates to: AVVIFRHEFPTK*QPLPQIFSGRA
Trigger: CGCCCTGCCGGAAAATATCTGTGGCAATGGCTGGCATTTGGTTGGAAACTCGTGTCTGAAAATCACTACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS GCA 72 bp CAGAAGCCAGCATCACTGGGCTCAGATGGCATCCACTaGAGCAAACTATTTGTGAATGGAGACATATCCTCC +
Preference number: 6 (lower is better)
Translates to: QKPASLGSDGIH*SKLFVNGDISS
Trigger: GGAGGATATGTCTCCATTCACAAATAGTTTGCTGCAGTGGATGCCATCTGAGCCCAGTGATGCTGGCTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS CCA 72 bp CACAGTGATCATTGCACCAGTGGCAGTCATTGGTATTaGCTGTGCAGCTGTAACAATCTGTGTGCTGGTCAC +
Preference number: 6 (lower is better)
Translates to: HSDHCTSGSHWY*LCSCNNLCAGH
Trigger: GTGACCAGCACACAGATTGTTACAGCTGCACAGCCAATACCAATGACTGCCACTGGTGCAATGATCACTGTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS CCA 72 bp CAGGGACACAGTGATCATTGCACCAGTGGCAGTCATTaGTATTGGCTGTGCAGCTGTAACAATCTGTGTGCT +
Preference number: 6 (lower is better)
Translates to: QGHSDHCTSGSH*YWLCSCNNLCA
Trigger: AGCACACAGATTGTTACAGCTGCACAGCCAATACCAATGACTGCCACTGGTGCAATGATCACTGTGTCCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS CCA 72 bp CAAGATCCCACAGAAGCCAGCATCACTGGGCTCAGATaGCATCCACTGCAGCAAACTATTTGTGAATGGAGA +
Preference number: 6 (lower is better)
Translates to: QDPTEASITGLR*HPLQQTICEWR
Trigger: TCTCCATTCACAAATAGTTTGCTGCAGTGGATGCCATCTGAGCCCAGTGATGCTGGCTTCTGTGGGATCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS CAA 90 bp CCGGCTGGGAAGCTGGTGGCCCAGGTGATGTTGAGGTTGAAGTTTTaGGAGGCATTGATGAACATGTCCAAATCCCTGTTTTGTTCATCA +
Preference number: 6 (lower is better)
Translates to: PAGKLVAQVMLRLKF*EALMNMSKSLFCSS
Trigger: TGATGAACAAAACAGGGATTTGGACATGTTCATCAATGCCTCCAAAAACTTCAACCTCAACATCACCTGGGCCACCAGCTTCCCAGCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS TCA 72 bp GTTGACATCATGATGGAGCTCAGGTCTGGGAAGCACTaGCCATCGGTCACAAGCAATGTCATAAGCCATGAA +
Preference number: 6 (lower is better)
Translates to: VDIMMELRSGKH*PSVTSNVISHE
Trigger: TTCATGGCTTATGACATTGCTTGTGACCGATGGTCAGTGCTTCCCAGACCTGAGCTCCATCATGATGTCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS TCA 72 bp TGGGCTCAGATGGCATCCACTGCAGCAAACTATTTGTaGATGGAGACATATCCTCCCAGCACCAGTAAGACA +
Preference number: 6 (lower is better)
Translates to: WAQMASTAANYL*METYPPSTSKT
Trigger: TGTCTTACTGGTGCTGGGAGGATATGTCTCCATTCACAAATAGTTTGCTGCAGTGGATGCCATCTGAGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS GCA 72 bp GATCATTGCACCAGTGGCAGTCATTGGTATTGGCTGTaGAGCTGTAACAATCTGTGTGCTGGTCACATCTGT +
Preference number: 6 (lower is better)
Translates to: DHCTSGSHWYWL*SCNNLCAGHIC
Trigger: ACAGATGTGACCAGCACACAGATTGTTACAGCTGCACAGCCAATACCAATGACTGCCACTGGTGCAATGATC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS CAA 72 bp ATTTTCAGACACGAGTTTCCAACCAAATGCCAGCCATaGCCACAGATATTTTCCGGCAGGGCGATGCACTCT +
Preference number: 6 (lower is better)
Translates to: IFRHEFPTKCQP*PQIFSGRAMHS
Trigger: AGAGTGCATCGCCCTGCCGGAAAATATCTGTGGCAATGGCTGGCATTTGGTTGGAAACTCGTGTCTGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS TCA 72 bp GCCGAACACATACATGGTGCTGTTGTACAAGACTGCTaGATGGCCAAATCTGTTGACATCATGATGGAGCTC +
Preference number: 6 (lower is better)
Translates to: AEHIHGAVVQDC*MAKSVDIMMEL
Trigger: GAGCTCCATCATGATGTCAACAGATTTGGCCATTCAGCAGTCTTGTACAACAGCACCATGTATGTGTTCGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS GCA 72 bp CATCTGAGTATCCACATCGTATCTGTAGAGGTCATCTaGAAGCCGGTATTTGTTGGCGCTGAAAGCCTTGTA +
Preference number: 6 (lower is better)
Translates to: HLSIHIVSVEVI*KPVFVGAESLV
Trigger: TACAAGGCTTTCAGCGCCAACAAATACCGGCTTGCAGATGACCTCTACAGATACGATGTGGATACTCAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS CCA 72 bp AATCGAAGCTGCTTAAGGACAAACTCCACCTTCTTCTaGGATGTGAGGGAAGCCAAAAAGGCATTGTGGTTC +
Preference number: 6 (lower is better)
Translates to: NRSCLRTNSTFF*DVREAKKALWF
Trigger: GAACCACAATGCCTTTTTGGCTTCCCTCACATCCCAGAAGAAGGTGGAGTTTGTCCTTAAGCAGCTTCGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS TCA 72 bp GCTGCTGCTGTTACTGCTCTTACACTCTCCTCGGCCTaGGCAATTATTCGGACACATGTCAAAATTGTAAGT +
Preference number: 6 (lower is better)
Translates to: AAAVTALTLSSA*AIIRTHVKIVS
Trigger: ACTTACAATTTTGACATGTGTCCGAATAATTGCTCAGGCCGAGGAGAGTGTAAGAGCAGTAACAGCAGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS CCA 72 bp GTCATATTCCTGCACAACGCTTATATATCCATAGAGTaGGCAATGACCGAAGATGACCAACATGACCACACG +
Preference number: 6 (lower is better)
Translates to: VIFLHNAYISIE*AMTEDDQHDHT
Trigger: CGTGTGGTCATGTTGGTCATCTTCGGTCATTGCCCACTCTATGGATATATAAGCGTTGTGCAGGAATATGAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS CCA 72 bp AAGTGTCATTGTGTGTGTTCCCTCCAAACACCAGCATaGTTCCACTCACTATCACAGCTGTATGCAAGTAAC +
Preference number: 6 (lower is better)
Translates to: KCHCVCSLQTPA*FHSLSQLYASN
Trigger: GTTACTTGCATACAGCTGTGATAGTGAGTGGAACCATGCTGGTGTTTGGAGGGAACACACACAATGACACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS CCA 72 bp TGGTTTTCTTATTGCAGTAGTACATGGGGTTATCCTTaGGGCAACTCTCATACTTGGCAATGGAGATCTGGC +
Preference number: 6 (lower is better)
Translates to: WFSYCSSTWGYP*GNSHTWQWRSG
Trigger: GCCAGATCTCCATTGCCAAGTATGAGAGTTGCCCCAAGGATAACCCCATGTACTACTGCAATAAGAAAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS CCA 72 bp CTCAGATGGCATCCACTGCAGCAAACTATTTGTGAATaGAGACATATCCTCCCAGCACCAGTAAGACACATT +
Preference number: 6 (lower is better)
Translates to: LRWHPLQQTICE*RHILPAPVRHI
Trigger: AATGTGTCTTACTGGTGCTGGGAGGATATGTCTCCATTCACAAATAGTTTGCTGCAGTGGATGCCATCTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS TCA 72 bp CCAACCCATGGAGTCAGAGTGAGCTTGGACATACTTTaGGATGATTGCATTAATCGAAGCTGCTTAAGGACA +
Preference number: 6 (lower is better)
Translates to: PTHGVRVSLDIL*DDCINRSCLRT
Trigger: TGTCCTTAAGCAGCTTCGATTAATGCAATCATCTCAAAGTATGTCCAAGCTCACTCTGACTCCATGGGTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS TCA 72 bp GTAACAATGTGTGCTGAGTGTCCAACCACTGCATACTaGTCCTTAGCTTTCGGAGTTAACAATACCCATGAT +
Preference number: 6 (lower is better)
Translates to: VTMCAECPTTAY*SLAFGVNNTHD
Trigger: ATCATGGGTATTGTTAACTCCGAAAGCTAAGGATCAGTATGCAGTGGTTGGACACTCAGCACACATTGTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS TCA 72 bp AGAGAAGCTATCTTTGTATTCCTTGATGTTGGTTTTTaGAACAACAGGCACCTCTTCTCCAGTCTGGGTTCC +
Preference number: 6 (lower is better)
Translates to: REAIFVFLDVGF*NNRHLFSSLGS
Trigger: GGAACCCAGACTGGAGAAGAGGTGCCTGTTGTTTCAAAAACCAACATCAAGGAATACAAAGATAGCTTCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS CCA 72 bp TTTAAATCAGAATATTCTTCTCGAGTCCAAAAAGACTaGTTAGCTGGCACAGGAATTGAGCATCCAGGACCC +
Preference number: 6 (lower is better)
Translates to: FKSEYSSRVQKD*LAGTGIEHPGP
Trigger: GGGTCCTGGATGCTCAATTCCTGTGCCAGCTAACCAGTCTTTTTGGACTCGAGAAGAATATTCTGATTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS TCA 72 bp ACATATATCCGCCAACAACCCACATTATATTTCCATTaGCCACAGCTTTATGAGAGGCTCTGGGAAGCTTTA +
Preference number: 6 (lower is better)
Translates to: TYIRQQPTLYFH*PQLYERLWEAL
Trigger: TAAAGCTTCCCAGAGCCTCTCATAAAGCTGTGGTCAATGGAAATATAATGTGGGTTGTTGGCGGATATATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS CAA 90 bp AAATCAAATTTCTCATTAGAGAAGCTATCTTTGTATTCCTTGATGTaGGTTTTTGAAACAACAGGCACCTCTTCTCCAGTCTGGGTTCCG +
Preference number: 6 (lower is better)
Translates to: KSNFSLEKLSLYSLM*VFETTGTSSPVWVP
Trigger: CGGAACCCAGACTGGAGAAGAGGTGCCTGTTGTTTCAAAAACCAACATCAAGGAATACAAAGATAGCTTCTCTAATGAGAAATTTGATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS TCA 72 bp GGTCATACGCTAAAACCATGCTGTAATCTGAATGGTTaGACATATATCCGCCAACAACCCACATTATATTTC +
Preference number: 6 (lower is better)
Translates to: GHTLKPCCNLNG*TYIRQQPTLYF
Trigger: GAAATATAATGTGGGTTGTTGGCGGATATATGTTCAACCATTCAGATTACAGCATGGTTTTAGCGTATGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS CAA 72 bp TTCTCATTAGAGAAGCTATCTTTGTATTCCTTGATGTaGGTTTTTGAAACAACAGGCACCTCTTCTCCAGTC +
Preference number: 6 (lower is better)
Translates to: FSLEKLSLYSLM*VFETTGTSSPV
Trigger: GACTGGAGAAGAGGTGCCTGTTGTTTCAAAAACCAACATCAAGGAATACAAAGATAGCTTCTCTAATGAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS TCA 72 bp ACAACCCACATTATATTTCCATTGACCACAGCTTTATaGGAGGCTCTGGGAAGCTTTAAATCAGAATATTCT +
Preference number: 6 (lower is better)
Translates to: TTHIIFPLTTAL*EALGSFKSEYS
Trigger: AGAATATTCTGATTTAAAGCTTCCCAGAGCCTCTCATAAAGCTGTGGTCAATGGAAATATAATGTGGGTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS CAA 90 bp TTTGGATGGTTGCGAAAATCAAATTTCTCATTAGAGAAGCTATCTTaGTATTCCTTGATGTTGGTTTTTGAAACAACAGGCACCTCTTCT +
Preference number: 6 (lower is better)
Translates to: FGWLRKSNFSLEKLS*YSLMLVFETTGTSS
Trigger: AGAAGAGGTGCCTGTTGTTTCAAAAACCAACATCAAGGAATACAAAGATAGCTTCTCTAATGAGAAATTTGATTTTCGCAACCATCCAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS TCA 72 bp ATGAAATACTCTCAGCTCATTGGTCACGTTCCCTGTTaGATCAATTTTTCCTCCATACATGTAGATTTTATC +
Preference number: 6 (lower is better)
Translates to: MKYSQLIGHVPC*INFSSIHVDFI
Trigger: GATAAAATCTACATGTATGGAGGAAAAATTGATTCAACAGGGAACGTGACCAATGAGCTGAGAGTATTTCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9
CDS CAA 72 bp TATGAAATACTCTCAGCTCATTGGTCACGTTCCCTGTaGAATCAATTTTTCCTCCATACATGTAGATTTTAT +
Preference number: 6 (lower is better)
Translates to: YEILSAHWSRSL*NQFFLHTCRFY
Trigger: ATAAAATCTACATGTATGGAGGAAAAATTGATTCAACAGGGAACGTGACCAATGAGCTGAGAGTATTTCATA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028781.9