Pregenerated sensors for ATRAID (Mus musculus)
Ensembl gene IDs: ENSMUSG00000013622Ensembl transcript IDs: ENSMUST00000013766.13, ENSMUST00000200748.4, ENSMUST00000200942.2, ENSMUST00000201773.4
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTCCAGGACAGGGAACATCTTGTGGTAGTATCAGAGTCTGCAGCTaGGTAAACCCACGGAAGGTGTTGGCCAAATCATCCTTGAGAGGA | + |
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Preference number: 1 (lower is better) Translates to: PPGQGTSCGSIRVCS*VNPRKVLAKSSLRG Trigger: TCCTCTCAAGGATGATTTGGCCAACACCTTCCGTGGGTTTACTCAGCTGCAGACTCTGATACTACCACAAGATGTTCCCTGTCCTGGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200942.2 |
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| 3UTR GCA 90 bp | GAAACCATCAGCACAAACGCACTGCAAAAGACCAGGACCGTCAGATaGACAAGATCCGTTCTCAGGACACATTTCTGGGCTTCCAGTGCT | + |
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Preference number: 1 (lower is better) Translates to: ETISTNALQKTRTVR*TRSVLRTHFWASSA Trigger: AGCACTGGAAGCCCAGAAATGTGTCCTGAGAACGGATCTTGTGCATCTGACGGTCCTGGTCTTTTGCAGTGCGTTTGTGCTGATGGTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200942.2 |
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| 3UTR GCA 90 bp | ACGAGTCCACTCCTGAACCAAGTGTCCACAAGACCCCCGAGGTGGTaGAATTTGACACCTTTCATTATCAATGGCCGCTTCAGCCTTAAA | + |
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Preference number: 1 (lower is better) Translates to: TSPLLNQVSTRPPRW*NLTPFIINGRFSLK Trigger: TTTAAGGCTGAAGCGGCCATTGATAATGAAAGGTGTCAAATTGCACCACCTCGGGGGTCTTGTGGACACTTGGTTCAGGAGTGGACTCGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013766.13 ENSMUST00000200942.2 |
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| 3UTR GCA 90 bp | TGCCTCATACACTTGTATCCATGGAAACCATCAGCACAAACGCACTaGAAAAGACCAGGACCGTCAGATGCACAAGATCCGTTCTCAGGA | + |
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Preference number: 1 (lower is better) Translates to: CLIHLYPWKPSAQTH*KRPGPSDAQDPFSG Trigger: TCCTGAGAACGGATCTTGTGCATCTGACGGTCCTGGTCTTTTGCAGTGCGTTTGTGCTGATGGTTTCCATGGATACAAGTGTATGAGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200942.2 |
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| 3UTR GCA 90 bp | TCAGGACACATTTCTGGGCTTCCAGTGCTATTGCAAAGGTCCCTTTaGCCTTGGCAAATCTGCTTGTCCTTGAAAGAAGTAACATTGTCC | + |
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Preference number: 1 (lower is better) Translates to: SGHISGLPVLLQRSL*PWQICLSLKEVTLS Trigger: GGACAATGTTACTTCTTTCAAGGACAAGCAGATTTGCCAAGGGCAAAGGGACCTTTGCAATAGCACTGGAAGCCCAGAAATGTGTCCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200942.2 |
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| 3UTR CCA 90 bp | AACATAAGCAGTGAAAATGAGCCCTGCCTCATACACTTGTATCCATaGAAACCATCAGCACAAACGCACTGCAAAAGACCAGGACCGTCA | + |
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Preference number: 1 (lower is better) Translates to: NISSENEPCLIHLYP*KPSAQTHCKRPGPS Trigger: TGACGGTCCTGGTCTTTTGCAGTGCGTTTGTGCTGATGGTTTCCATGGATACAAGTGTATGAGGCAGGGCTCATTTTCACTGCTTATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200942.2 |
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| 3UTR CAA 90 bp | GTGCGCAGTCAGGTGAGCTGGAAGTCTTGTGTGGCTCATGAAGCCTaGGCTTTCCGGCGCTGGGTTCCCCAAAGTAGAATGGAGATGGCT | + |
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Preference number: 2 (lower is better) Translates to: VRSQVSWKSCVAHEA*AFRRWVPQSRMEMA Trigger: AGCCATCTCCATTCTACTTTGGGGAACCCAGCGCCGGAAAGCCAAGGCTTCATGAGCCACACAAGACTTCCAGCTCACCTGACTGCGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200942.2 |
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| 3UTR-3UTR CCA 90 bp | ACCAGGACCGTCAGATGCACAAGATCCGTTCTCAGGACACATTTCTGGGCTTCCAGGTCCCTTTGCCCTTaGCAAATCTGCTTGTCCTTG | + |
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Preference number: 2 (lower is better) Translates to: TRTVRCTRSVLRTHFWASRSLCP*QICLSL Trigger: CAAGGACAAGCAGATTTGCCAAGGGCAAAGGGACCT...GGAAGCCCAGAAATGTGTCCTGAGAACGGATCTTGTGCATCTGACGGTCCTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200942.2 |
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| 3UTR-3UTR GCA 90 bp | CAGCACAAACGCACTGCAAAAGACCAGGACCGTCAGATGCACAAGATCCGTTCTTTGCAAAGGTCCCTTTaGCCTTGGCAAATCTGCTTG | + |
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Preference number: 2 (lower is better) Translates to: QHKRTAKDQDRQMHKIRSLQRSL*PWQICL Trigger: CAAGCAGATTTGCCAAGGGCAAAGGGACCTTTGCAA...AGAACGGATCTTGTGCATCTGACGGTCCTGGTCTTTTGCAGTGCGTTTGTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200942.2 |
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| 3UTR CAA 90 bp | TCCCTTTGCCCTTGGCAAATCTGCTTGTCCTTGAAAGAAGTAACATaGTCCCAGGCATTACTACCTCCAGGACAGGGAACATCTTGTGGT | + |
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Preference number: 2 (lower is better) Translates to: SLCPWQICLSLKEVT*SQALLPPGQGTSCG Trigger: ACCACAAGATGTTCCCTGTCCTGGAGGTAGTAATGCCTGGGACAATGTTACTTCTTTCAAGGACAAGCAGATTTGCCAAGGGCAAAGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200942.2 |
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| 3UTR CAA 90 bp | CTTCCAGTGCTATTGCAAAGGTCCCTTTGCCCTTGGCAAATCTGCTaGTCCTTGAAAGAAGTAACATTGTCCCAGGCATTACTACCTCCA | + |
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Preference number: 2 (lower is better) Translates to: LPVLLQRSLCPWQIC*SLKEVTLSQALLPP Trigger: TGGAGGTAGTAATGCCTGGGACAATGTTACTTCTTTCAAGGACAAGCAGATTTGCCAAGGGCAAAGGGACCTTTGCAATAGCACTGGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200942.2 |
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| 3UTR CAA 90 bp | CTCAGGACACATTTCTGGGCTTCCAGTGCTATTGCAAAGGTCCCTTaGCCCTTGGCAAATCTGCTTGTCCTTGAAAGAAGTAACATTGTC | + |
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Preference number: 2 (lower is better) Translates to: LRTHFWASSAIAKVP*PLANLLVLERSNIV Trigger: GACAATGTTACTTCTTTCAAGGACAAGCAGATTTGCCAAGGGCAAAGGGACCTTTGCAATAGCACTGGAAGCCCAGAAATGTGTCCTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200942.2 |
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| 3UTR-3UTR TCA 90 bp | ATCCCAAAGAACATAAGCAGTGAAAATGAGCCCTGCCTCATACACTTGTATCCAATCAGAGTCTGCAGCTaGGTAAACCCACGGAAGGTG | + |
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Preference number: 2 (lower is better) Translates to: IPKNISSENEPCLIHLYPIRVCS*VNPRKV Trigger: CACCTTCCGTGGGTTTACTCAGCTGCAGACTCTGAT...TGGATACAAGTGTATGAGGCAGGGCTCATTTTCACTGCTTATGTTCTTTGGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200942.2 |
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| 3UTR-3UTR GCA 90 bp | CATCAGCACAAACGCACTGCAAAAGACCAGGACCGTCAGATGCACAAGATCCGTAGCCTTAAACAGTTCTaGTCATTGGCCAGTAATTGT | + |
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Preference number: 2 (lower is better) Translates to: HQHKRTAKDQDRQMHKIRSLKQF*SLASNC Trigger: ACAATTACTGGCCAATGAGCAGAACTGTTTAAGGCT...ACGGATCTTGTGCATCTGACGGTCCTGGTCTTTTGCAGTGCGTTTGTGCTGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200942.2 |
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| 3UTR-3UTR GCA 90 bp | CGTCAGATGCACAAGATCCGTTCTCAGGACACATTTCTGGGCTTCCAGTGCTATTGCCCTTGGCAAATCTaGTTGTCCTTGAAAGAAGTA | + |
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Preference number: 2 (lower is better) Translates to: RQMHKIRSQDTFLGFQCYCPWQI*LSLKEV Trigger: TACTTCTTTCAAGGACAAGCAGATTTGCCAAGGGCA...ATAGCACTGGAAGCCCAGAAATGTGTCCTGAGAACGGATCTTGTGCATCTGACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200942.2 |
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| 3UTR-3UTR CCA 90 bp | TCTGCTCATTGGCCAGTAATTGTCAACGAAGTAAATCTTCTTGGCTGCGACATGAGATGGCTAGCGTGGTaGATCCCAGAATCCCAAAGA | + |
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Preference number: 2 (lower is better) Translates to: SAHWPVIVNEVNLLGCDMRWLAW*IPESQR Trigger: TCTTTGGGATTCTGGGATCCACCACGCTAGCCATCT...CATGTCGCAGCCAAGAAGATTTACTTCGTTGACAATTACTGGCCAATGAGCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200942.2 |
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| 3UTR-3UTR TCA 90 bp | TCTGCTCATTGGCCAGTAATTGTCAACGAAGTAAATCTTCTTGGCTGCGACATGCGAGGTGGTGCAATTTaGCACCTTTCATTATCAATG | + |
|
Preference number: 2 (lower is better) Translates to: SAHWPVIVNEVNLLGCDMRGGAI*HLSLSM Trigger: CATTGATAATGAAAGGTGTCAAATTGCACCACCTCG...CATGTCGCAGCCAAGAAGATTTACTTCGTTGACAATTACTGGCCAATGAGCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013766.13 ENSMUST00000200942.2 |
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| 3UTR-3UTR TCA 90 bp | TCTGCTCATTGGCCAGTAATTGTCAACGAAGTAAATCTTCTTGGCTGCGACATGTTGAGAGGATTTGCCTaGAGGTCTATGATAATAGCA | + |
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Preference number: 2 (lower is better) Translates to: SAHWPVIVNEVNLLGCDMLRGFA*RSMIIA Trigger: TGCTATTATCATAGACCTTCAGGCAAATCCTCTCAA...CATGTCGCAGCCAAGAAGATTTACTTCGTTGACAATTACTGGCCAATGAGCAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200942.2 |
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| 3UTR-3UTR GCA 90 bp | TCTGCTCATTGGCCAGTAATTGTCAACGAAGTAAATCTTCTTGGCTGCGACATGAGCCTTAAACAGTTCTaGTCATTGGCCAGTAATTGT | + |
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Preference number: 2 (lower is better) Translates to: SAHWPVIVNEVNLLGCDMSLKQF*SLASNC Trigger: ACAATTACTGGCCAATGAGCAGAACTGTTTAAGGCT...CATGTCGCAGCCAAGAAGATTTACTTCGTTGACAATTACTGGCCAATGAGCAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013766.13 ENSMUST00000200942.2 |
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| 3UTR-3UTR GCA 90 bp | TGCTTGTCCTTGAAAGAAGTAACATTGTCCCAGGCATTACTACCTCCAGGACAGATCCTTGAGAGGATTTaGCTGAAGGTCTATGATAAT | + |
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Preference number: 2 (lower is better) Translates to: CLSLKEVTLSQALLPPGQILERI*LKVYDN Trigger: ATTATCATAGACCTTCAGGCAAATCCTCTCAAGGAT...CTGTCCTGGAGGTAGTAATGCCTGGGACAATGTTACTTCTTTCAAGGACAAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200942.2 |
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| 3UTR TCA 72 bp | GCGCAGTCAGGTGAGCTGGAAGTCTTGTGTGGCTCATaGAGCCTTGGCTTTCCGGCGCTGGGTTCCCCAAAG | + |
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Preference number: 3 (lower is better) Translates to: AQSGELEVLCGS*SLGFPALGSPK Trigger: CTTTGGGGAACCCAGCGCCGGAAAGCCAAGGCTTCATGAGCCACACAAGACTTCCAGCTCACCTGACTGCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200942.2 |
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| 3UTR CCA 72 bp | CCTTGGCTTTCCGGCGCTGGGTTCCCCAAAGTAGAATaGAGATGGCTAGCGTGGTGGATCCCAGAATCCCAA | + |
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Preference number: 3 (lower is better) Translates to: PWLSGAGFPKVE*RWLAWWIPESQ Trigger: TTGGGATTCTGGGATCCACCACGCTAGCCATCTCCATTCTACTTTGGGGAACCCAGCGCCGGAAAGCCAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200942.2 |
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| 3UTR CCA 72 bp | TCTTGTGTGGCTCATGAAGCCTTGGCTTTCCGGCGCTaGGTTCCCCAAAGTAGAATGGAGATGGCTAGCGTG | + |
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Preference number: 3 (lower is better) Translates to: SCVAHEALAFRR*VPQSRMEMASV Trigger: CACGCTAGCCATCTCCATTCTACTTTGGGGAACCCAGCGCCGGAAAGCCAAGGCTTCATGAGCCACACAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200942.2 |
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| 3UTR CCA 72 bp | CTTTCCGGCGCTGGGTTCCCCAAAGTAGAATGGAGATaGCTAGCGTGGTGGATCCCAGAATCCCAAAGAACA | + |
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Preference number: 3 (lower is better) Translates to: LSGAGFPKVEWR*LAWWIPESQRT Trigger: TGTTCTTTGGGATTCTGGGATCCACCACGCTAGCCATCTCCATTCTACTTTGGGGAACCCAGCGCCGGAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200942.2 |
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| 3UTR CCA 72 bp | CCACTCCTGAACCAAGTGTCCACAAGACCCCCGAGGTaGTGCAATTTGACACCTTTCATTATCAATGGCCGC | + |
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Preference number: 3 (lower is better) Translates to: PLLNQVSTRPPR*CNLTPFIINGR Trigger: GCGGCCATTGATAATGAAAGGTGTCAAATTGCACCACCTCGGGGGTCTTGTGGACACTTGGTTCAGGAGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013766.13 ENSMUST00000200942.2 |
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| 3UTR-3UTR CAA 90 bp | GACCAGGACCGTCAGATGCACAAGATCCGTTCTCAGGACACATTTCTGGGCTTCAACCCACGGAAGGTGTaGGCCAAATCATCCTTGAGA | + |
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Preference number: 3 (lower is better) Translates to: DQDRQMHKIRSQDTFLGFNPRKV*AKSSLR Trigger: TCTCAAGGATGATTTGGCCAACACCTTCCGTGGGTT...GAAGCCCAGAAATGTGTCCTGAGAACGGATCTTGTGCATCTGACGGTCCTGGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200942.2 |
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| 3UTR GCA 72 bp | CTCCTGAACCAAGTGTCCACAAGACCCCCGAGGTGGTaGAATTTGACACCTTTCATTATCAATGGCCGCTTC | + |
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Preference number: 3 (lower is better) Translates to: LLNQVSTRPPRW*NLTPFIINGRF Trigger: GAAGCGGCCATTGATAATGAAAGGTGTCAAATTGCACCACCTCGGGGGTCTTGTGGACACTTGGTTCAGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013766.13 ENSMUST00000200942.2 |
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| 3UTR GCA 72 bp | AGCACAAACGCACTGCAAAAGACCAGGACCGTCAGATaGACAAGATCCGTTCTCAGGACACATTTCTGGGCT | + |
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Preference number: 3 (lower is better) Translates to: STNALQKTRTVR*TRSVLRTHFWA Trigger: AGCCCAGAAATGTGTCCTGAGAACGGATCTTGTGCATCTGACGGTCCTGGTCTTTTGCAGTGCGTTTGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200942.2 |
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| 3UTR TCA 72 bp | ACCAAGTGTCCACAAGACCCCCGAGGTGGTGCAATTTaGCACCTTTCATTATCAATGGCCGCTTCAGCCTTA | + |
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Preference number: 3 (lower is better) Translates to: TKCPQDPRGGAI*HLSLSMAASAL Trigger: TAAGGCTGAAGCGGCCATTGATAATGAAAGGTGTCAAATTGCACCACCTCGGGGGTCTTGTGGACACTTGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013766.13 ENSMUST00000200942.2 |
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| 3UTR TCA 72 bp | CAGGGAACATCTTGTGGTAGTATCAGAGTCTGCAGCTaGGTAAACCCACGGAAGGTGTTGGCCAAATCATCC | + |
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Preference number: 3 (lower is better) Translates to: QGTSCGSIRVCS*VNPRKVLAKSS Trigger: GGATGATTTGGCCAACACCTTCCGTGGGTTTACTCAGCTGCAGACTCTGATACTACCACAAGATGTTCCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200942.2 |
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| 3UTR GCA 72 bp | CGTTCTCAGGACACATTTCTGGGCTTCCAGTGCTATTaGAAAGGTCCCTTTGCCCTTGGCAAATCTGCTTGT | + |
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Preference number: 3 (lower is better) Translates to: RSQDTFLGFQCY*KGPFALGKSAC Trigger: ACAAGCAGATTTGCCAAGGGCAAAGGGACCTTTGCAATAGCACTGGAAGCCCAGAAATGTGTCCTGAGAACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200942.2 |
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| 3UTR GCA 72 bp | CACTTGTATCCATGGAAACCATCAGCACAAACGCACTaGAAAAGACCAGGACCGTCAGATGCACAAGATCCG | + |
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Preference number: 3 (lower is better) Translates to: HLYPWKPSAQTH*KRPGPSDAQDP Trigger: CGGATCTTGTGCATCTGACGGTCCTGGTCTTTTGCAGTGCGTTTGTGCTGATGGTTTCCATGGATACAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200942.2 |
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| 3UTR-3UTR CAA 90 bp | GCCCTGCCTCATACACTTGTATCCATGGAAACCATCAGCACAAACGCACTGCAATTGAAAGAAGTAACATaGTCCCAGGCATTACTACCT | + |
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Preference number: 3 (lower is better) Translates to: ALPHTLVSMETISTNALQLKEVT*SQALLP Trigger: AGGTAGTAATGCCTGGGACAATGTTACTTCTTTCAA...TTGCAGTGCGTTTGTGCTGATGGTTTCCATGGATACAAGTGTATGAGGCAGGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200942.2 |
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| 3UTR CCA 72 bp | AGTGAAAATGAGCCCTGCCTCATACACTTGTATCCATaGAAACCATCAGCACAAACGCACTGCAAAAGACCA | + |
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Preference number: 3 (lower is better) Translates to: SENEPCLIHLYP*KPSAQTHCKRP Trigger: TGGTCTTTTGCAGTGCGTTTGTGCTGATGGTTTCCATGGATACAAGTGTATGAGGCAGGGCTCATTTTCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200942.2 |
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| 3UTR GCA 72 bp | ACGGAAGGTGTTGGCCAAATCATCCTTGAGAGGATTTaGCTGAAGGTCTATGATAATAGCAGTATAAGCCTG | + |
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Preference number: 3 (lower is better) Translates to: TEGVGQIILERI*LKVYDNSSISL Trigger: CAGGCTTATACTGCTATTATCATAGACCTTCAGGCAAATCCTCTCAAGGATGATTTGGCCAACACCTTCCGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200942.2 |
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| CDS-3UTR GCA 90 bp | GGCCGGGACTTGATAGATGAGGGTGCGCAGTCAGGTGAGCTGGAAGTCTTGTGTCTAGCCCCAAGATGGTaGCCTTCTGATTCAGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: GRDLIDEGAQSGELEVLCLAPRW*PSDSGS Trigger: GCTGCCTGAATCAGAAGGGCACCATCTTGGGGCTAG...ACACAAGACTTCCAGCTCACCTGACTGCGCACCCTCATCTATCAAGTCCCGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013766.13 |
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| CDS-3UTR CCA 90 bp | GGCCGGGACTTGATAGATGAGGGTGCGCAGTCAGGTGAGCTGGAAGTCTTGTGTTGGAGATGGCTAGCGTaGTGGATCCCAGAATCCCAA | + |
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Preference number: 4 (lower is better) Translates to: GRDLIDEGAQSGELEVLCWRWLA*WIPESQ Trigger: TTGGGATTCTGGGATCCACCACGCTAGCCATCTCCA...ACACAAGACTTCCAGCTCACCTGACTGCGCACCCTCATCTATCAAGTCCCGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013766.13 |
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| 3UTR CAA 72 bp | CAGGTGAGCTGGAAGTCTTGTGTGGCTCATGAAGCCTaGGCTTTCCGGCGCTGGGTTCCCCAAAGTAGAATG | + |
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Preference number: 4 (lower is better) Translates to: QVSWKSCVAHEA*AFRRWVPQSRM Trigger: CATTCTACTTTGGGGAACCCAGCGCCGGAAAGCCAAGGCTTCATGAGCCACACAAGACTTCCAGCTCACCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200942.2 |
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| CDS-3UTR CCA 90 bp | GGCCGGGACTTGATAGATGAGGGTGCGCAGTCAGGTGAGCTGGAAGTCTTGTGTAGATGGCTAGCGTGGTaGATCCCAGAATCCCAAAGA | + |
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Preference number: 4 (lower is better) Translates to: GRDLIDEGAQSGELEVLCRWLAW*IPESQR Trigger: TCTTTGGGATTCTGGGATCCACCACGCTAGCCATCT...ACACAAGACTTCCAGCTCACCTGACTGCGCACCCTCATCTATCAAGTCCCGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013766.13 |
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| 3UTR CAA 72 bp | CGAAGTAAATCTTCTTGGCTGCGACATGGCCGGGACTaGATAGATGAGGGTGCGCAGTCAGGTGAGCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: RSKSSWLRHGRD*IDEGAQSGELE Trigger: TTCCAGCTCACCTGACTGCGCACCCTCATCTATCAAGTCCCGGCCATGTCGCAGCCAAGAAGATTTACTTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013766.13 ENSMUST00000200942.2 |
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| CDS-3UTR TCA 90 bp | TGCTCATTGGCCAGTAATTGTCAACGAAGTAAATCTTCTTGGCTGCGACATGGCAAGATGGTGCCCTTCTaGTTCAGGCAGCATCGGGCC | + |
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Preference number: 4 (lower is better) Translates to: CSLASNCQRSKSSWLRHGKMVPF*FRQHRA Trigger: GGCCCGATGCTGCCTGAATCAGAAGGGCACCATCTT...GCCATGTCGCAGCCAAGAAGATTTACTTCGTTGACAATTACTGGCCAATGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013766.13 |
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| CDS-3UTR GCA 90 bp | TCAGATGCACAAGATCCGTTCTCAGGACACATTTCTGGGCTTCCAGTGCTATTGCTCCCGGACACAGGGTaGATATCTCAGGTAGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: SDAQDPFSGHISGLPVLLLPDTG*ISQVEP Trigger: TGGCTCTACCTGAGATATGCACCCTGTGTCCGGGAG...CAATAGCACTGGAAGCCCAGAAATGTGTCCTGAGAACGGATCTTGTGCATCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200942.2 |
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| CDS-3UTR CCA 90 bp | CATTGGCCAGTAATTGTCAACGAAGTAAATCTTCTTGGCTGCGACATGGCCGGGGATCTAGCCCCAAGATaGTGCCCTTCTGATTCAGGC | + |
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Preference number: 4 (lower is better) Translates to: HWPVIVNEVNLLGCDMAGDLAPR*CPSDSG Trigger: GCCTGAATCAGAAGGGCACCATCTTGGGGCTAGATC...CCCGGCCATGTCGCAGCCAAGAAGATTTACTTCGTTGACAATTACTGGCCAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013766.13 |
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| 3UTR CAA 72 bp | CCGTTCTCAGGACACATTTCTGGGCTTCCAGTGCTATaGCAAAGGTCCCTTTGCCCTTGGCAAATCTGCTTG | + |
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Preference number: 4 (lower is better) Translates to: PFSGHISGLPVL*QRSLCPWQICL Trigger: CAAGCAGATTTGCCAAGGGCAAAGGGACCTTTGCAATAGCACTGGAAGCCCAGAAATGTGTCCTGAGAACGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200942.2 |
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| CDS-3UTR GCA 90 bp | CATTGGCCAGTAATTGTCAACGAAGTAAATCTTCTTGGCTGCGACATGGCCGGGTCAGCACAAACGCACTaGAAAAGACCAGGACCGTCA | + |
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Preference number: 4 (lower is better) Translates to: HWPVIVNEVNLLGCDMAGSAQTH*KRPGPS Trigger: TGACGGTCCTGGTCTTTTGCAGTGCGTTTGTGCTGA...CCCGGCCATGTCGCAGCCAAGAAGATTTACTTCGTTGACAATTACTGGCCAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013766.13 |
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| CDS-3UTR CCA 90 bp | TTGGCCAGTAATTGTCAACGAAGTAAATCTTCTTGGCTGCGACATGGCCGGGACAGGTCCCTTTGCCCTTaGCAAATCTGCTTGTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: LASNCQRSKSSWLRHGRDRSLCP*QICLSL Trigger: CAAGGACAAGCAGATTTGCCAAGGGCAAAGGGACCT...GTCCCGGCCATGTCGCAGCCAAGAAGATTTACTTCGTTGACAATTACTGGCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013766.13 |
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| CDS-3UTR TCA 90 bp | TGCTCATTGGCCAGTAATTGTCAACGAAGTAAATCTTCTTGGCTGCGACATGGCATCAGAGTCTGCAGCTaGGTAAACCCACGGAAGGTG | + |
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Preference number: 4 (lower is better) Translates to: CSLASNCQRSKSSWLRHGIRVCS*VNPRKV Trigger: CACCTTCCGTGGGTTTACTCAGCTGCAGACTCTGAT...GCCATGTCGCAGCCAAGAAGATTTACTTCGTTGACAATTACTGGCCAATGAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013766.13 |
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| CDS-3UTR GCA 90 bp | TCTGCTCATTGGCCAGTAATTGTCAACGAAGTAAATCTTCTTGGCTGCGACATGCTCCCGGACACAGGGTaGATATCTCAGGTAGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: SAHWPVIVNEVNLLGCDMLPDTG*ISQVEP Trigger: TGGCTCTACCTGAGATATGCACCCTGTGTCCGGGAG...CATGTCGCAGCCAAGAAGATTTACTTCGTTGACAATTACTGGCCAATGAGCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013766.13 ENSMUST00000200942.2 |
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| CDS-3UTR GCA 90 bp | CATTGGCCAGTAATTGTCAACGAAGTAAATCTTCTTGGCTGCGACATGGCCGGGTTGCAAAGGTCCCTTTaGCCTTGGCAAATCTGCTTG | + |
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Preference number: 4 (lower is better) Translates to: HWPVIVNEVNLLGCDMAGLQRSL*PWQICL Trigger: CAAGCAGATTTGCCAAGGGCAAAGGGACCTTTGCAA...CCCGGCCATGTCGCAGCCAAGAAGATTTACTTCGTTGACAATTACTGGCCAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013766.13 |
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| CDS-3UTR CCA 90 bp | GCTCATTGGCCAGTAATTGTCAACGAAGTAAATCTTCTTGGCTGCGACATGGCCCTCAGGACACATTTCTaGGCTTCCAGTGCTATTGCA | + |
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Preference number: 4 (lower is better) Translates to: AHWPVIVNEVNLLGCDMALRTHF*ASSAIA Trigger: TGCAATAGCACTGGAAGCCCAGAAATGTGTCCTGAG...GGCCATGTCGCAGCCAAGAAGATTTACTTCGTTGACAATTACTGGCCAATGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013766.13 |
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| 3UTR CAA 72 bp | CCTTGGCAAATCTGCTTGTCCTTGAAAGAAGTAACATaGTCCCAGGCATTACTACCTCCAGGACAGGGAACA | + |
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Preference number: 4 (lower is better) Translates to: PWQICLSLKEVT*SQALLPPGQGT Trigger: TGTTCCCTGTCCTGGAGGTAGTAATGCCTGGGACAATGTTACTTCTTTCAAGGACAAGCAGATTTGCCAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200942.2 |
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| 3UTR CAA 72 bp | CATTTCTGGGCTTCCAGTGCTATTGCAAAGGTCCCTTaGCCCTTGGCAAATCTGCTTGTCCTTGAAAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: HFWASSAIAKVP*PLANLLVLERS Trigger: ACTTCTTTCAAGGACAAGCAGATTTGCCAAGGGCAAAGGGACCTTTGCAATAGCACTGGAAGCCCAGAAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200942.2 |
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| 3UTR CAA 72 bp | CAAAGGTCCCTTTGCCCTTGGCAAATCTGCTTGTCCTaGAAAGAAGTAACATTGTCCCAGGCATTACTACCT | + |
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Preference number: 4 (lower is better) Translates to: QRSLCPWQICLS*KEVTLSQALLP Trigger: AGGTAGTAATGCCTGGGACAATGTTACTTCTTTCAAGGACAAGCAGATTTGCCAAGGGCAAAGGGACCTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200942.2 |
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| 3UTR CAA 72 bp | TGGGCTTCCAGTGCTATTGCAAAGGTCCCTTTGCCCTaGGCAAATCTGCTTGTCCTTGAAAGAAGTAACATT | + |
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Preference number: 4 (lower is better) Translates to: WASSAIAKVPLP*ANLLVLERSNI Trigger: AATGTTACTTCTTTCAAGGACAAGCAGATTTGCCAAGGGCAAAGGGACCTTTGCAATAGCACTGGAAGCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200942.2 |
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| 3UTR CAA 72 bp | AACATAAGCAGTGAAAATGAGCCCTGCCTCATACACTaGTATCCATGGAAACCATCAGCACAAACGCACTGC | + |
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Preference number: 4 (lower is better) Translates to: NISSENEPCLIH*YPWKPSAQTHC Trigger: GCAGTGCGTTTGTGCTGATGGTTTCCATGGATACAAGTGTATGAGGCAGGGCTCATTTTCACTGCTTATGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200942.2 |
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| CDS-3UTR TCA 90 bp | GCTCATTGGCCAGTAATTGTCAACGAAGTAAATCTTCTTGGCTGCGACATGGCCTTGAGAGGATTTGCCTaGAGGTCTATGATAATAGCA | + |
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Preference number: 4 (lower is better) Translates to: AHWPVIVNEVNLLGCDMALRGFA*RSMIIA Trigger: TGCTATTATCATAGACCTTCAGGCAAATCCTCTCAA...GGCCATGTCGCAGCCAAGAAGATTTACTTCGTTGACAATTACTGGCCAATGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013766.13 |
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| CDS-3UTR GCA 90 bp | CATTGGCCAGTAATTGTCAACGAAGTAAATCTTCTTGGCTGCGACATGGCCGGGATCCTTGAGAGGATTTaGCTGAAGGTCTATGATAAT | + |
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Preference number: 4 (lower is better) Translates to: HWPVIVNEVNLLGCDMAGILERI*LKVYDN Trigger: ATTATCATAGACCTTCAGGCAAATCCTCTCAAGGAT...CCCGGCCATGTCGCAGCCAAGAAGATTTACTTCGTTGACAATTACTGGCCAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013766.13 |
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| CDS-3UTR GCA 90 bp | TGCTCATTGGCCAGTAATTGTCAACGAAGTAAATCTTCTTGGCTGCGACATGGCTGCCCTTGGCAAATCTaGTTGTCCTTGAAAGAAGTA | + |
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Preference number: 4 (lower is better) Translates to: CSLASNCQRSKSSWLRHGCPWQI*LSLKEV Trigger: TACTTCTTTCAAGGACAAGCAGATTTGCCAAGGGCA...GCCATGTCGCAGCCAAGAAGATTTACTTCGTTGACAATTACTGGCCAATGAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013766.13 |
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| CDS-3UTR CCA 90 bp | GCTCATTGGCCAGTAATTGTCAACGAAGTAAATCTTCTTGGCTGCGACATGGCCATACACTTGTATCCATaGAAACCATCAGCACAAACG | + |
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Preference number: 4 (lower is better) Translates to: AHWPVIVNEVNLLGCDMAIHLYP*KPSAQT Trigger: CGTTTGTGCTGATGGTTTCCATGGATACAAGTGTAT...GGCCATGTCGCAGCCAAGAAGATTTACTTCGTTGACAATTACTGGCCAATGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013766.13 |
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| 3UTR CAA 72 bp | CTATTGCAAAGGTCCCTTTGCCCTTGGCAAATCTGCTaGTCCTTGAAAGAAGTAACATTGTCCCAGGCATTA | + |
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Preference number: 4 (lower is better) Translates to: LLQRSLCPWQIC*SLKEVTLSQAL Trigger: TAATGCCTGGGACAATGTTACTTCTTTCAAGGACAAGCAGATTTGCCAAGGGCAAAGGGACCTTTGCAATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200942.2 |
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| CDS-3UTR GCA 90 bp | TTCTGCTCATTGGCCAGTAATTGTCAACGAAGTAAATCTTCTTGGCTGCGACATTTTCTGGGCTTCCAGTaGTATTGCAAAGGTCCCTTT | + |
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Preference number: 4 (lower is better) Translates to: FCSLASNCQRSKSSWLRHFLGFQ*YCKGPF Trigger: AAAGGGACCTTTGCAATAGCACTGGAAGCCCAGAAA...ATGTCGCAGCCAAGAAGATTTACTTCGTTGACAATTACTGGCCAATGAGCAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013766.13 |
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| 3UTR CAA 72 bp | ATCAATGGCCGCTTCAGCCTTAAACAGTTCTGCTCATaGGCCAGTAATTGTCAACGAAGTAAATCTTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: INGRFSLKQFCS*ASNCQRSKSSW Trigger: CCAAGAAGATTTACTTCGTTGACAATTACTGGCCAATGAGCAGAACTGTTTAAGGCTGAAGCGGCCATTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013766.13 ENSMUST00000200942.2 |
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| CDS GCA 90 bp | AAGCAGCCACTCTGGACAAATTGTGCATACCTCCCGGACACAGGGTaGATATCTCAGGTAGAGCCAGGGCCCTCTCCACGCCCAGAACCA | + |
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Preference number: 5 (lower is better) Translates to: KQPLWTNCAYLPDTG*ISQVEPGPSPRPEP Trigger: TGGTTCTGGGCGTGGAGAGGGCCCTGGCTCTACCTGAGATATGCACCCTGTGTCCGGGAGGTATGCACAATTTGTCCAGAGTGGCTGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013766.13 ENSMUST00000201773.4 |
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| CDS CCA 90 bp | GGGCCTGCATTAGCTTCGATGTATCCTCACAGTAAGCAGCCACTCTaGACAAATTGTGCATACCTCCCGGACACAGGGTGCATATCTCAG | + |
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Preference number: 5 (lower is better) Translates to: GPALASMYPHSKQPL*TNCAYLPDTGCISQ Trigger: CTGAGATATGCACCCTGTGTCCGGGAGGTATGCACAATTTGTCCAGAGTGGCTGCTTACTGTGAGGATACATCGAAGCTAATGCAGGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000013766.13 ENSMUST00000200748.4 ENSMUST00000201773.4 |
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| CDS-3UTR CAA 90 bp | GGCCGGGACTTGATAGATGAGGGTGCGCAGTCAGGTGAGCTGGAAGTCTTGTGTTTGAAAGAAGTAACATaGTCCCAGGCATTACTACCT | + |
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Preference number: 5 (lower is better) Translates to: GRDLIDEGAQSGELEVLCLKEVT*SQALLP Trigger: AGGTAGTAATGCCTGGGACAATGTTACTTCTTTCAA...ACACAAGACTTCCAGCTCACCTGACTGCGCACCCTCATCTATCAAGTCCCGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013766.13 |
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| CDS-3UTR CAA 90 bp | TTGGCCAGTAATTGTCAACGAAGTAAATCTTCTTGGCTGCGACATGGCCGGGACAAGGTCCCTTTGCCCTaGGCAAATCTGCTTGTCCTT | + |
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Preference number: 5 (lower is better) Translates to: LASNCQRSKSSWLRHGRDKVPLP*ANLLVL Trigger: AAGGACAAGCAGATTTGCCAAGGGCAAAGGGACCTT...GTCCCGGCCATGTCGCAGCCAAGAAGATTTACTTCGTTGACAATTACTGGCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013766.13 |
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| CDS-3UTR CAA 90 bp | GCTCATTGGCCAGTAATTGTCAACGAAGTAAATCTTCTTGGCTGCGACATGGCCAACCCACGGAAGGTGTaGGCCAAATCATCCTTGAGA | + |
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Preference number: 5 (lower is better) Translates to: AHWPVIVNEVNLLGCDMANPRKV*AKSSLR Trigger: TCTCAAGGATGATTTGGCCAACACCTTCCGTGGGTT...GGCCATGTCGCAGCCAAGAAGATTTACTTCGTTGACAATTACTGGCCAATGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013766.13 |
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| CDS-3UTR CAA 90 bp | TTGGCCAGTAATTGTCAACGAAGTAAATCTTCTTGGCTGCGACATGGCCGGGACATTGCAAAGGTCCCTTaGCCCTTGGCAAATCTGCTT | + |
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Preference number: 5 (lower is better) Translates to: LASNCQRSKSSWLRHGRDIAKVP*PLANLL Trigger: AAGCAGATTTGCCAAGGGCAAAGGGACCTTTGCAAT...GTCCCGGCCATGTCGCAGCCAAGAAGATTTACTTCGTTGACAATTACTGGCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013766.13 |
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| CDS-3UTR CAA 90 bp | CATTGGCCAGTAATTGTCAACGAAGTAAATCTTCTTGGCTGCGACATGGCCGGGCAAATCTGCTTGTCCTaGAAAGAAGTAACATTGTCC | + |
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Preference number: 5 (lower is better) Translates to: HWPVIVNEVNLLGCDMAGQICLS*KEVTLS Trigger: GGACAATGTTACTTCTTTCAAGGACAAGCAGATTTG...CCCGGCCATGTCGCAGCCAAGAAGATTTACTTCGTTGACAATTACTGGCCAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013766.13 |
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| CDS-3UTR CAA 90 bp | TTCTGCTCATTGGCCAGTAATTGTCAACGAAGTAAATCTTCTTGGCTGCGACATCCCTGCCTCATACACTaGTATCCATGGAAACCATCA | + |
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Preference number: 5 (lower is better) Translates to: FCSLASNCQRSKSSWLRHPCLIH*YPWKPS Trigger: TGATGGTTTCCATGGATACAAGTGTATGAGGCAGGG...ATGTCGCAGCCAAGAAGATTTACTTCGTTGACAATTACTGGCCAATGAGCAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013766.13 |
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| CDS GCA 72 bp | CTCTGGACAAATTGTGCATACCTCCCGGACACAGGGTaGATATCTCAGGTAGAGCCAGGGCCCTCTCCACGC | + |
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Preference number: 6 (lower is better) Translates to: LWTNCAYLPDTG*ISQVEPGPSPR Trigger: GCGTGGAGAGGGCCCTGGCTCTACCTGAGATATGCACCCTGTGTCCGGGAGGTATGCACAATTTGTCCAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000013766.13 ENSMUST00000200748.4 ENSMUST00000201773.4 |
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| CDS GCA 72 bp | TCAGGGAACAGTTCTGAAGATCTAGCCCCAAGATGGTaGCCTTCTGATTCAGGCAGCATCGGGCCTGCATTA | + |
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Preference number: 6 (lower is better) Translates to: SGNSSEDLAPRW*PSDSGSIGPAL Trigger: TAATGCAGGCCCGATGCTGCCTGAATCAGAAGGGCACCATCTTGGGGCTAGATCTTCAGAACTGTTCCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000013766.13 ENSMUST00000200748.4 ENSMUST00000201773.4 |
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