Pregenerated sensors for ATR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032409Ensembl transcript IDs: ENSMUST00000034980.9, ENSMUST00000215311.2
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GCATGGGCACCCAGAACTGACGGAAGAGTAGGGATCATGACTGACTaGAGGGGAATGAGGATCTCACTGAAGGTCGGGTCTTCTACAAGC | + |
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Preference number: 5 (lower is better) Translates to: AWAPRTDGRVGIMTD*RGMRISLKVGSSTS Trigger: GCTTGTAGAAGACCCGACCTTCAGTGAGATCCTCATTCCCCTGCAGTCAGTCATGATCCCTACTCTTCCGTCAGTTCTGGGTGCCCATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS TCA 90 bp | GGACCACAGCCACTTTGCCCTCTCCACATACAGTTCAGCAAGTCGTaGCTCTCCAGCATTAAGGAGAGCATTGTAGGCTGTCTGATGGTG | + |
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Preference number: 5 (lower is better) Translates to: GPQPLCPLHIQFSKS*LSSIKESIVGCLMV Trigger: CACCATCAGACAGCCTACAATGCTCTCCTTAATGCTGGAGAGTCACGACTTGCTGAACTGTATGTGGAGAGGGCAAAGTGGCTGTGGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS TCA 90 bp | ATTGCCCCCAGTTCTCCTAAACATTCCCCACAGAGTAAGCGAGCTTaGGAGTTTGCATCTTGGCAGCCTTTCAGAATTACCGTCACAAGC | + |
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Preference number: 5 (lower is better) Translates to: IAPSSPKHSPQSKRA*EFASWQPFRITVTS Trigger: GCTTGTGACGGTAATTCTGAAAGGCTGCCAAGATGCAAACTCTCAAGCTCGCTTACTCTGTGGGGAATGTTTAGGAGAACTGGGGGCAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS TCA 90 bp | GTTTCTCAGCATTCAATGCCTGAAATTTGTGCCTTGCCCATTGGGTaGGATGGTCAAGCACAGAGAACACAGTCTGTGTACTCAGCTGGC | + |
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Preference number: 5 (lower is better) Translates to: VSQHSMPEICALPIG*DGQAQRTQSVYSAG Trigger: GCCAGCTGAGTACACAGACTGTGTTCTCTGTGCTTGACCATCTCACCCAATGGGCAAGGCACAAATTTCAGGCATTGAATGCTGAGAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS GCA 90 bp | AAGCACAGAGAACACAGTCTGTGTACTCAGCTGGCACAGATCAGATaGACTGTCTTGGGTACTGATGGCATGCTGCTCATCATGCTTAAG | + |
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Preference number: 5 (lower is better) Translates to: KHREHSLCTQLAQIR*TVLGTDGMLLIMLK Trigger: CTTAAGCATGATGAGCAGCATGCCATCAGTACCCAAGACAGTGCATCTGATCTGTGCCAGCTGAGTACACAGACTGTGTTCTCTGTGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS GCA 90 bp | ATGTTCAAGAATCTGTTCCTTCAGGGATGGCTCGGCTTTCCGAATTaGACTTACTCCAGCCACTCCATCTGGCTCATGCATAGCAGCATA | + |
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Preference number: 5 (lower is better) Translates to: MFKNLFLQGWLGFPN*TYSSHSIWLMHSSI Trigger: TATGCTGCTATGCATGAGCCAGATGGAGTGGCTGGAGTAAGTGCAATTCGGAAAGCCGAGCCATCCCTGAAGGAACAGATTCTTGAACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CCA 90 bp | CAGCAAGCCAATACTTTCATGTTCAAGAATCTGTTCCTTCAGGGATaGCTCGGCTTTCCGAATTGCACTTACTCCAGCCACTCCATCTGG | + |
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Preference number: 5 (lower is better) Translates to: QQANTFMFKNLFLQG*LGFPNCTYSSHSIW Trigger: CCAGATGGAGTGGCTGGAGTAAGTGCAATTCGGAAAGCCGAGCCATCCCTGAAGGAACAGATTCTTGAACATGAAAGTATTGGCTTGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS GCA 90 bp | GCTCCAGAGACGGATGCAGACTTAGACAGCAAGCAATGCAGTAAATaGAAGAGTGCGAAAGGTATCAAATCTCCTTTTGCTGCCCTTCCA | + |
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Preference number: 5 (lower is better) Translates to: APETDADLDSKQCSK*KSAKGIKSPFAALP Trigger: TGGAAGGGCAGCAAAAGGAGATTTGATACCTTTCGCACTCTTGCATTTACTGCATTGCTTGCTGTCTAAGTCTGCATCCGTCTCTGGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS GCA 90 bp | TGGTTTCTGAAGAGAAGAAAGAATTTCTACCACATCATCGAAGCCTaGAAGATAGGCCCAGTGCCCAGGAAAGGGGTCATGATTCGCATG | + |
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Preference number: 5 (lower is better) Translates to: WFLKRRKNFYHIIEA*KIGPVPRKGVMIRM Trigger: CATGCGAATCATGACCCCTTTCCTGGGCACTGGGCCTATCTTGCAGGCTTCGATGATGTGGTAGAAATTCTTTCTTCTCTTCAGAAACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CCA 90 bp | AACACAGTCTGTGTACTCAGCTGGCACAGATCAGATGCACTGTCTTaGGTACTGATGGCATGCTGCTCATCATGCTTAAGTACTGCCATA | + |
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Preference number: 5 (lower is better) Translates to: NTVCVLSWHRSDALS*VLMACCSSCLSTAI Trigger: TATGGCAGTACTTAAGCATGATGAGCAGCATGCCATCAGTACCCAAGACAGTGCATCTGATCTGTGCCAGCTGAGTACACAGACTGTGTT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS TCA 90 bp | CAGCATCCATTCCAACAAGGTGTTGTAGCAACTCCAAAAATAAGCTaGAAAAAGTGCTGGCTGGCTGTGCTGGTAACCCTCCAAGCTCAA | + |
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Preference number: 5 (lower is better) Translates to: QHPFQQGVVATPKIS*KKCWLAVLVTLQAQ Trigger: TTGAGCTTGGAGGGTTACCAGCACAGCCAGCCAGCACTTTTTTCAGCTTATTTTTGGAGTTGCTACAACACCTTGTTGGAATGGATGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS GCA 90 bp | GTGTATGCCGCTCCAGAGACGGATGCAGACTTAGACAGCAAGCAATaGAGTAAATGCAAGAGTGCGAAAGGTATCAAATCTCCTTTTGCT | + |
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Preference number: 5 (lower is better) Translates to: VYAAPETDADLDSKQ*SKCKSAKGIKSPFA Trigger: AGCAAAAGGAGATTTGATACCTTTCGCACTCTTGCATTTACTGCATTGCTTGCTGTCTAAGTCTGCATCCGTCTCTGGAGCGGCATACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS TCA 90 bp | CCTCCTTTTGGTTTGTTTTGTGCAAGTTTCTCAGCATTCAATGCCTaGAATTTGTGCCTTGCCCATTGGGTGAGATGGTCAAGCACAGAG | + |
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Preference number: 5 (lower is better) Translates to: PPFGLFCASFSAFNA*NLCLAHWVRWSSTE Trigger: CTCTGTGCTTGACCATCTCACCCAATGGGCAAGGCACAAATTTCAGGCATTGAATGCTGAGAAACTTGCACAAAACAAACCAAAAGGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215311.2 |
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| CDS GCA 90 bp | ATCTTGTTTTCGAATCTCAGAAGACTGGCAAGGAGCACTTGGGAGTaGTGTCATCTGACTGGAGTGGAGAGATTCTACCAAAAACTGACA | + |
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Preference number: 5 (lower is better) Translates to: ILFSNLRRLARSTWE*CHLTGVERFYQKLT Trigger: TGTCAGTTTTTGGTAGAATCTCTCCACTCCAGTCAGATGACAGCACTCCCAAGTGCTCCTTGCCAGTCTTCTGAGATTCGAAAACAAGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS GCA 90 bp | GTTTTGTGCAAGTTTCTCAGCATTCAATGCCTGAAATTTGTGCCTTaGCCATTGGGTGAGATGGTCAAGCACAGAGAACACAGTCTGTGT | + |
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Preference number: 5 (lower is better) Translates to: VLCKFLSIQCLKFVP*PLGEMVKHREHSLC Trigger: ACACAGACTGTGTTCTCTGTGCTTGACCATCTCACCCAATGGGCAAGGCACAAATTTCAGGCATTGAATGCTGAGAAACTTGCACAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CCA 90 bp | AGCAACATCTTGTTTTCGAATCTCAGAAGACTGGCAAGGAGCACTTaGGAGTGCTGTCATCTGACTGGAGTGGAGAGATTCTACCAAAAA | + |
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Preference number: 5 (lower is better) Translates to: SNILFSNLRRLARST*ECCHLTGVERFYQK Trigger: TTTTTGGTAGAATCTCTCCACTCCAGTCAGATGACAGCACTCCCAAGTGCTCCTTGCCAGTCTTCTGAGATTCGAAAACAAGATGTTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS TCA 90 bp | CTTTTTGTAAGAGCTGAGAGAGGAGCTGAGTTTACGCCTCTTTGGTaGCACCTCATCATTATTACCACTGAGATTCTCCTGTTGAGCTTG | + |
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Preference number: 5 (lower is better) Translates to: LFVRAERGAEFTPLW*HLIIITTEILLLSL Trigger: CAAGCTCAACAGGAGAATCTCAGTGGTAATAATGATGAGGTGTCACCAAAGAGGCGTAAACTCAGCTCCTCTCTCAGCTCTTACAAAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS TCA 90 bp | ACTCCTTTTGGTTTGTTTTGTGCAAGTTTCTCAGCATTCAATGCCTaGAATTTGTGCCTTGCCCATTGGGTGAGATGGTCAAGCACAGAG | + |
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Preference number: 5 (lower is better) Translates to: TPFGLFCASFSAFNA*NLCLAHWVRWSSTE Trigger: CTCTGTGCTTGACCATCTCACCCAATGGGCAAGGCACAAATTTCAGGCATTGAATGCTGAGAAACTTGCACAAAACAAACCAAAAGGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034980.9 |
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| CDS TCA 90 bp | CATGACTGCAGTAGAGCGGCAATATGCAGATCTGCTACTGTACCATaGTGTAGGATCAGGGAATGTTCTCAGAAACCACTCATGAAAAAC | + |
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Preference number: 5 (lower is better) Translates to: HDCSRAAICRSATVP*CRIRECSQKPLMKN Trigger: GTTTTTCATGAGTGGTTTCTGAGAACATTCCCTGATCCTACATCATGGTACAGTAGCAGATCTGCATATTGCCGCTCTACTGCAGTCATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS GCA 90 bp | CCACTCTGGCAGAAACAAGGTCACATCCTTGTATTTCTTCATTACTaGGTTGCTTTCAAAGTTAGCCGTTTCTTCCATAAAGCGGCCAAC | + |
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Preference number: 5 (lower is better) Translates to: PLWQKQGHILVFLHY*VAFKVSRFFHKAAN Trigger: GTTGGCCGCTTTATGGAAGAAACGGCTAACTTTGAAAGCAACGCAGTAATGAAGAAATACAAGGATGTGACCTTGTTTCTGCCAGAGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CCA 90 bp | TATTTCCCGGACATGCTCAGGGAATCTTTTCCACAACTGGTAACCTaGGCCATTGCTCTGCATCTCTCTACAGTCATAAATAGAAAGCAA | + |
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Preference number: 5 (lower is better) Translates to: YFPDMLRESFPQLVT*AIALHLSTVINRKQ Trigger: TTGCTTTCTATTTATGACTGTAGAGAGATGCAGAGCAATGGCCCAGGTTACCAGTTGTGGAAAAGATTCCCTGAGCATGTCCGGGAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS TCA 90 bp | CAGGATGGAGTTGCTGCAATCCGTAAAAGTCTTGTAATGATCCAATaGCTGAATTCAATACAACTGTCTTTGGCCTCATTTTGGCCCTGG | + |
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Preference number: 5 (lower is better) Translates to: QDGVAAIRKSLVMIQ*LNSIQLSLASFWPW Trigger: CCAGGGCCAAAATGAGGCCAAAGACAGTTGTATTGAATTCAGTCATTGGATCATTACAAGACTTTTACGGATTGCAGCAACTCCATCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS TCA 90 bp | GCCTCAGCAACAGAATTCTTGAGAGTACCACATTCGAGAGAGATCTaGAGGGATTCGGCTTTCTGTTTCAGAACATTCCATAATATGCTC | + |
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Preference number: 5 (lower is better) Translates to: ASATEFLRVPHSREI*RDSAFCFRTFHNML Trigger: GAGCATATTATGGAATGTTCTGAAACAGAAAGCCGAATCCCTTCAGATCTCTCTCGAATGTGGTACTCTCAAGAATTCTGTTGCTGAGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS TCA 90 bp | GAGAAGATGAACATTCATGCTGAGAAGTGGCTTTCAGGTTCTTACTaGACAAGTCCATATGTTCAAAGCAAGGCTCTACTGAGGAACTCA | + |
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Preference number: 5 (lower is better) Translates to: EKMNIHAEKWLSGSY*TSPYVQSKALLRNS Trigger: TGAGTTCCTCAGTAGAGCCTTGCTTTGAACATATGGACTTGTTCAGTAAGAACCTGAAAGCCACTTCTCAGCATGAATGTTCATCTTCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS TCA 90 bp | ATGCTTTGGAACGAAAGGACGCTACAGCCAGAGTATCCTGAGGTATaGGGTCTAGAAAACGAGTTACACTCTGATAGTCTTCAAAATTCA | + |
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Preference number: 5 (lower is better) Translates to: MLWNERTLQPEYPEV*GLENELHSDSLQNS Trigger: TGAATTTTGAAGACTATCAGAGTGTAACTCGTTTTCTAGACCTCATACCTCAGGATACTCTGGCTGTAGCGTCCTTTCGTTCCAAAGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CCA 90 bp | CCATTTTGTTATCTGTTACCATCGGCATCAATTTGTCATAGTACTTaGCAAGGTAGAAATGTCCATCTTCCCACTCTGGCAGAAACAAGG | + |
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Preference number: 5 (lower is better) Translates to: PFCYLLPSASICHST*QGRNVHLPTLAETR Trigger: CCTTGTTTCTGCCAGAGTGGGAAGATGGACATTTCTACCTTGCCAAGTACTATGACAAATTGATGCCGATGGTAACAGATAACAAAATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS TCA 90 bp | GACCAATCTGTTGATTTCTGGGAACTCTTATATCTAGTATTGAGATaGGGCTCTAATATTTCCCGGACATGCTCAGGGAATCTTTTCCAC | + |
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Preference number: 5 (lower is better) Translates to: DQSVDFWELLYLVLR*GSNISRTCSGNLFH Trigger: GTGGAAAAGATTCCCTGAGCATGTCCGGGAAATATTAGAGCCTCATCTCAATACTAGATATAAGAGTTCCCAGAAATCAACAGATTGGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CCA 90 bp | TTTGTCATAGTACTTGGCAAGGTAGAAATGTCCATCTTCCCACTCTaGCAGAAACAAGGTCACATCCTTGTATTTCTTCATTACTGCGTT | + |
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Preference number: 5 (lower is better) Translates to: FVIVLGKVEMSIFPL*QKQGHILVFLHYCV Trigger: AACGCAGTAATGAAGAAATACAAGGATGTGACCTTGTTTCTGCCAGAGTGGGAAGATGGACATTTCTACCTTGCCAAGTACTATGACAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS TCA 90 bp | AATAGACCCTCTGTTCCCATAGGACCCATTCCATTAACCATATTATaGGTCAGTCGAAATGGTACAATTTCCGGAACTTCAAACGTTTCT | + |
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Preference number: 5 (lower is better) Translates to: NRPSVPIGPIPLTIL*VSRNGTISGTSNVS Trigger: AGAAACGTTTGAAGTTCCGGAAATTGTACCATTTCGACTGACTCATAATATGGTTAATGGAATGGGTCCTATGGGAACAGAGGGTCTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS TCA 90 bp | ATCCCACATTCATCATTCAGTGGAATAACTGCATATGTTCGGATATaGAGTTCTCTTCGACGTGATTCTGCATCTTTTCTTAAGCTCTTG | + |
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Preference number: 5 (lower is better) Translates to: IPHSSFSGITAYVRI*SSLRRDSASFLKLL Trigger: CAAGAGCTTAAGAAAAGATGCAGAATCACGTCGAAGAGAACTTCATATCCGAACATATGCAGTTATTCCACTGAATGATGAATGTGGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS GCA 90 bp | TGCTCTGTGAGTACACTATTTATTTTAGCCAAATCATTTCTCATTTaGAGACGATCAGAACGACCACCTTTTTCCCATTCGTATGCCTTA | + |
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Preference number: 5 (lower is better) Translates to: CSVSTLFILAKSFLI*RRSERPPFSHSYAL Trigger: TAAGGCATACGAATGGGAAAAAGGTGGTCGTTCTGATCGTCTGCAAATGAGAAATGATTTGGCTAAAATAAATAGTGTACTCACAGAGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CCA 90 bp | ACTTTGAGTTTTTCAGATAAAGCTGCTGACTTTGGTAGCATACACTaGCGAAGCTCCTTTCCTGTCATATACACTCCCTTTTCTTTATAT | + |
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Preference number: 5 (lower is better) Translates to: TLSFSDKAADFGSIH*RSSFPVIYTPFSLY Trigger: ATATAAAGAAAAGGGAGTGTATATGACAGGAAAGGAGCTTCGCCAGTGTATGCTACCAAAGTCAGCAGCTTTATCTGAAAAACTCAAAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CCA 90 bp | AATAATAACGAGCAGATAACTTCACATATTTTCTTGTGTAGCATGTaGCAGGATGGAGTTGCTGCAATCCGTAAAAGTCTTGTAATGATC | + |
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Preference number: 5 (lower is better) Translates to: NNNEQITSHIFLCSM*QDGVAAIRKSLVMI Trigger: GATCATTACAAGACTTTTACGGATTGCAGCAACTCCATCCTGCCACATGCTACACAAGAAAATATGTGAAGTTATCTGCTCGTTATTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CCA 90 bp | TCCCATAGGACCCATTCCATTAACCATATTATGAGTCAGTCGAAATaGTACAATTTCCGGAACTTCAAACGTTTCTCCCTTATTAAAAAG | + |
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Preference number: 5 (lower is better) Translates to: SHRTHSINHIMSQSK*YNFRNFKRFSLIKK Trigger: CTTTTTAATAAGGGAGAAACGTTTGAAGTTCCGGAAATTGTACCATTTCGACTGACTCATAATATGGTTAATGGAATGGGTCCTATGGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS TCA 90 bp | ATGGAAGTGAGAGCATTCCACATAACTCTTCCAGAACATGATCCTTaGATGAACTTTTTACTTGCATATACATCAGAGCATCACAAATTC | + |
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Preference number: 5 (lower is better) Translates to: MEVRAFHITLPEHDP*MNFLLAYTSEHHKF Trigger: GAATTTGTGATGCTCTGATGTATATGCAAGTAAAAAGTTCATTCAAGGATCATGTTCTGGAAGAGTTATGTGGAATGCTCTCACTTCCAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CCA 90 bp | TCTAGAGCAACAACATTTACATCTGTAAGTATTCTGTCAATGAACTaGCAGAGAATCTGTCTTGGTTTCTGTACAACAGTGTTATATTCT | + |
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Preference number: 5 (lower is better) Translates to: SRATTFTSVSILSMN*QRICLGFCTTVLYS Trigger: AGAATATAACACTGTTGTACAGAAACCAAGACAGATTCTCTGCCAGTTCATTGACAGAATACTTACAGATGTAAATGTTGTTGCTCTAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CAA 72 bp | GCGCCTGGTGAACGTCACCCTTGGACCACAGCCACTTaGCCCTCTCCACATACAGTTCAGCAAGTCGTGACT | + |
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Preference number: 6 (lower is better) Translates to: APGERHPWTTAT*PSPHTVQQVVT Trigger: AGTCACGACTTGCTGAACTGTATGTGGAGAGGGCAAAGTGGCTGTGGTCCAAGGGTGACGTTCACCAGGCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS GCA 72 bp | CCCAGAACTGACGGAAGAGTAGGGATCATGACTGACTaGAGGGGAATGAGGATCTCACTGAAGGTCGGGTCT | + |
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Preference number: 6 (lower is better) Translates to: PRTDGRVGIMTD*RGMRISLKVGS Trigger: AGACCCGACCTTCAGTGAGATCCTCATTCCCCTGCAGTCAGTCATGATCCCTACTCTTCCGTCAGTTCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CAA 72 bp | GAATCTGTTCCTTCAGGGATGGCTCGGCTTTCCGAATaGCACTTACTCCAGCCACTCCATCTGGCTCATGCA | + |
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Preference number: 6 (lower is better) Translates to: ESVPSGMARLSE*HLLQPLHLAHA Trigger: TGCATGAGCCAGATGGAGTGGCTGGAGTAAGTGCAATTCGGAAAGCCGAGCCATCCCTGAAGGAACAGATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS GCA 72 bp | GAACACAGTCTGTGTACTCAGCTGGCACAGATCAGATaGACTGTCTTGGGTACTGATGGCATGCTGCTCATC | + |
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Preference number: 6 (lower is better) Translates to: EHSLCTQLAQIR*TVLGTDGMLLI Trigger: GATGAGCAGCATGCCATCAGTACCCAAGACAGTGCATCTGATCTGTGCCAGCTGAGTACACAGACTGTGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS GCA 72 bp | AATCTGTTCCTTCAGGGATGGCTCGGCTTTCCGAATTaGACTTACTCCAGCCACTCCATCTGGCTCATGCAT | + |
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Preference number: 6 (lower is better) Translates to: NLFLQGWLGFPN*TYSSHSIWLMH Trigger: ATGCATGAGCCAGATGGAGTGGCTGGAGTAAGTGCAATTCGGAAAGCCGAGCCATCCCTGAAGGAACAGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS TCA 72 bp | CCACTTTGCCCTCTCCACATACAGTTCAGCAAGTCGTaGCTCTCCAGCATTAAGGAGAGCATTGTAGGCTGT | + |
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Preference number: 6 (lower is better) Translates to: PLCPLHIQFSKS*LSSIKESIVGC Trigger: ACAGCCTACAATGCTCTCCTTAATGCTGGAGAGTCACGACTTGCTGAACTGTATGTGGAGAGGGCAAAGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS GCA 72 bp | AGGCTAATTGCTAAAGACCTGATTTTGGGACTACCGTaGTCTAGCAGAGCGCAGCCGATTTGCCACAGTAAC | + |
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Preference number: 6 (lower is better) Translates to: RLIAKDLILGLP*SSRAQPICHSN Trigger: GTTACTGTGGCAAATCGGCTGCGCTCTGCTAGAGCACGGTAGTCCCAAAATCAGGTCTTTAGCAATTAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CCA 72 bp | GCATCTTGGCAGCCTTTCAGAATTACCGTCACAAGCTaGGAGATAACGGGCTCCACTGTCTCACTATCAGTT | + |
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Preference number: 6 (lower is better) Translates to: ASWQPFRITVTS*EITGSTVSLSV Trigger: AACTGATAGTGAGACAGTGGAGCCCGTTATCTCCCAGCTTGTGACGGTAATTCTGAAAGGCTGCCAAGATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CCA 72 bp | TGGTCAAGCACAGAGAACACAGTCTGTGTACTCAGCTaGCACAGATCAGATGCACTGTCTTGGGTACTGATG | + |
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Preference number: 6 (lower is better) Translates to: WSSTENTVCVLS*HRSDALSWVLM Trigger: CATCAGTACCCAAGACAGTGCATCTGATCTGTGCCAGCTGAGTACACAGACTGTGTTCTCTGTGCTTGACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CCA 72 bp | ACTCATAGCCTCGTTGGTAGGAGCCTCTTTCAAAGCTaGCAGCTGAGAGAGGTACGATTTGTTCTGCTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: THSLVGRSLFQS*QLREVRFVLLS Trigger: TGAGAGCAGAACAAATCGTACCTCTCTCAGCTGCCAGCTTTGAAAGAGGCTCCTACCAACGAGGCTATGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CAA 90 bp | AGCTCAAAGAGCTCAGTTAGAAGGCTAATTGCTAAAGACCTGATTTaGGGACTACCGTGCTCTAGCAGAGCGCAGCCGATTTGCCACAGT | + |
|
Preference number: 6 (lower is better) Translates to: SSKSSVRRLIAKDLI*GLPCSSRAQPICHS Trigger: ACTGTGGCAAATCGGCTGCGCTCTGCTAGAGCACGGTAGTCCCAAAATCAGGTCTTTAGCAATTAGCCTTCTAACTGAGCTCTTTGAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CAA 90 bp | CCAGTTCTCCTAAACATTCCCCACAGAGTAAGCGAGCTTGAGAGTTaGCATCTTGGCAGCCTTTCAGAATTACCGTCACAAGCTGGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: PVLLNIPHRVSELES*HLGSLSELPSQAGR Trigger: TCTCCCAGCTTGTGACGGTAATTCTGAAAGGCTGCCAAGATGCAAACTCTCAAGCTCGCTTACTCTGTGGGGAATGTTTAGGAGAACTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CAA 90 bp | GAACACAGTCTGTGTACTCAGCTGGCACAGATCAGATGCACTGTCTaGGGTACTGATGGCATGCTGCTCATCATGCTTAAGTACTGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: EHSLCTQLAQIRCTV*GTDGMLLIMLKYCH Trigger: ATGGCAGTACTTAAGCATGATGAGCAGCATGCCATCAGTACCCAAGACAGTGCATCTGATCTGTGCCAGCTGAGTACACAGACTGTGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CAA 90 bp | TTGGCCTTCTCATTGACAACTTCCCCGGTTTCATTCAGTGGTGCTTaGGAGTGTCCTTTCACTGGTTTACTCCACTCCACTAGAGGATCG | + |
|
Preference number: 6 (lower is better) Translates to: LAFSLTTSPVSFSGA*ECPFTGLLHSTRGS Trigger: CGATCCTCTAGTGGAGTGGAGTAAACCAGTGAAAGGACACTCCAAAGCACCACTGAATGAAACCGGGGAAGTTGTCAATGAGAAGGCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS GCA 72 bp | CCAACTAGCAGTGTGGCCCGGCCATGGATTAGCATGTaGTTACTCTCAGATGGGGACTTATTTTCAGGAAAA | + |
|
Preference number: 6 (lower is better) Translates to: PTSSVARPWISM*LLSDGDLFSGK Trigger: TTTTCCTGAAAATAAGTCCCCATCTGAGAGTAAGCACATGCTAATCCATGGCCGGGCCACACTGCTAGTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS GCA 72 bp | AAGAGAAGAAAGAATTTCTACCACATCATCGAAGCCTaGAAGATAGGCCCAGTGCCCAGGAAAGGGGTCATG | + |
|
Preference number: 6 (lower is better) Translates to: KRRKNFYHIIEA*KIGPVPRKGVM Trigger: CATGACCCCTTTCCTGGGCACTGGGCCTATCTTGCAGGCTTCGATGATGTGGTAGAAATTCTTTCTTCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CCA 72 bp | ATGACTCAAAGTGCATTACGGCTCGTGTGTATGCTTTaGAACGAAAGGACGCTACAGCCAGAGTATCCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: MTQSALRLVCML*NERTLQPEYPE Trigger: CTCAGGATACTCTGGCTGTAGCGTCCTTTCGTTCCAAAGCATACACACGAGCCGTAATGCACTTTGAGTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CCA 72 bp | GGCCTTCTCATTGACAACTTCCCCGGTTTCATTCAGTaGTGCTTTGGAGTGTCCTTTCACTGGTTTACTCCA | + |
|
Preference number: 6 (lower is better) Translates to: GLLIDNFPGFIQ*CFGVSFHWFTP Trigger: TGGAGTAAACCAGTGAAAGGACACTCCAAAGCACCACTGAATGAAACCGGGGAAGTTGTCAATGAGAAGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CAA 72 bp | CTCAGCATTCAATGCCTGAAATTTGTGCCTTGCCCATaGGGTGAGATGGTCAAGCACAGAGAACACAGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: LSIQCLKFVPCP*GEMVKHREHSL Trigger: CAGACTGTGTTCTCTGTGCTTGACCATCTCACCCAATGGGCAAGGCACAAATTTCAGGCATTGAATGCTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CAA 90 bp | TGTTTCCCTAAAGTTCGAATGAGAGCCGATGCTGCAGGACTTGCTTaGGCAGCAAGATCAGGAAGCAGAACTTGTAATGTCCTTGTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: CFPKVRMRADAAGLA*AARSGSRTCNVLVR Trigger: CCTGACAAGGACATTACAAGTTCTGCTTCCTGATCTTGCTGCCAAAGCAAGTCCTGCAGCATCGGCTCTCATTCGAACTTTAGGGAAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CAA 90 bp | TTCCTTGAGTTTCTGTTGTTGAGAAATCCAATCGCCCTGGGTCTATaGCCCCCAGTTCTCCTAAACATTCCCCACAGAGTAAGCGAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: FLEFLLLRNPIALGL*PPVLLNIPHRVSEL Trigger: AAGCTCGCTTACTCTGTGGGGAATGTTTAGGAGAACTGGGGGCAATAGACCCAGGGCGATTGGATTTCTCAACAACAGAAACTCAAGGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS TCA 72 bp | AGAGCTGAGAGAGGAGCTGAGTTTACGCCTCTTTGGTaGCACCTCATCATTATTACCACTGAGATTCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: RAERGAEFTPLW*HLIIITTEILL Trigger: CAGGAGAATCTCAGTGGTAATAATGATGAGGTGTCACCAAAGAGGCGTAAACTCAGCTCCTCTCTCAGCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS TCA 72 bp | CATTCAATGCCTGAAATTTGTGCCTTGCCCATTGGGTaGGATGGTCAAGCACAGAGAACACAGTCTGTGTAC | + |
|
Preference number: 6 (lower is better) Translates to: HSMPEICALPIG*DGQAQRTQSVY Trigger: GTACACAGACTGTGTTCTCTGTGCTTGACCATCTCACCCAATGGGCAAGGCACAAATTTCAGGCATTGAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS TCA 72 bp | TACAACTGTCACCTGGAGACTTGCGAAAAAGCGGTTTaGGGCTGTGCTCCAACTCACACAACATGTGTAATC | + |
|
Preference number: 6 (lower is better) Translates to: YNCHLETCEKAV*GCAPTHTTCVI Trigger: GATTACACATGTTGTGTGAGTTGGAGCACAGCCTCAAACCGCTTTTTCGCAAGTCTCCAGGTGACAGTTGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CAA 72 bp | TTTCTGTTGTTGAGAAATCCAATCGCCCTGGGTCTATaGCCCCCAGTTCTCCTAAACATTCCCCACAGAGTA | + |
|
Preference number: 6 (lower is better) Translates to: FLLLRNPIALGL*PPVLLNIPHRV Trigger: TACTCTGTGGGGAATGTTTAGGAGAACTGGGGGCAATAGACCCAGGGCGATTGGATTTCTCAACAACAGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CAA 72 bp | TTCAGAGAGTCTTCATTACAACTGTCACCTGGAGACTaGCGAAAAAGCGGTTTGAGGCTGTGCTCCAACTCA | + |
|
Preference number: 6 (lower is better) Translates to: FRESSLQLSPGD*RKSGLRLCSNS Trigger: TGAGTTGGAGCACAGCCTCAAACCGCTTTTTCGCAAGTCTCCAGGTGACAGTTGTAATGAAGACTCTCTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CAA 72 bp | TCATTGACAACTTCCCCGGTTTCATTCAGTGGTGCTTaGGAGTGTCCTTTCACTGGTTTACTCCACTCCACT | + |
|
Preference number: 6 (lower is better) Translates to: SLTTSPVSFSGA*ECPFTGLLHST Trigger: AGTGGAGTGGAGTAAACCAGTGAAAGGACACTCCAAAGCACCACTGAATGAAACCGGGGAAGTTGTCAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS TCA 72 bp | TTCCAACAAGGTGTTGTAGCAACTCCAAAAATAAGCTaGAAAAAGTGCTGGCTGGCTGTGCTGGTAACCCTC | + |
|
Preference number: 6 (lower is better) Translates to: FQQGVVATPKIS*KKCWLAVLVTL Trigger: GAGGGTTACCAGCACAGCCAGCCAGCACTTTTTTCAGCTTATTTTTGGAGTTGCTACAACACCTTGTTGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS TCA 72 bp | AGTTCTCCTAAACATTCCCCACAGAGTAAGCGAGCTTaGGAGTTTGCATCTTGGCAGCCTTTCAGAATTACC | + |
|
Preference number: 6 (lower is better) Translates to: SSPKHSPQSKRA*EFASWQPFRIT Trigger: GGTAATTCTGAAAGGCTGCCAAGATGCAAACTCTCAAGCTCGCTTACTCTGTGGGGAATGTTTAGGAGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS TCA 72 bp | AGTAGAGCGGCAATATGCAGATCTGCTACTGTACCATaGTGTAGGATCAGGGAATGTTCTCAGAAACCACTC | + |
|
Preference number: 6 (lower is better) Translates to: SRAAICRSATVP*CRIRECSQKPL Trigger: GAGTGGTTTCTGAGAACATTCCCTGATCCTACATCATGGTACAGTAGCAGATCTGCATATTGCCGCTCTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS GCA 72 bp | GCTCCAGAGACGGATGCAGACTTAGACAGCAAGCAATaGAGTAAATGCAAGAGTGCGAAAGGTATCAAATCT | + |
|
Preference number: 6 (lower is better) Translates to: APETDADLDSKQ*SKCKSAKGIKS Trigger: AGATTTGATACCTTTCGCACTCTTGCATTTACTGCATTGCTTGCTGTCTAAGTCTGCATCCGTCTCTGGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS GCA 72 bp | AAGTTTCTCAGCATTCAATGCCTGAAATTTGTGCCTTaGCCATTGGGTGAGATGGTCAAGCACAGAGAACAC | + |
|
Preference number: 6 (lower is better) Translates to: KFLSIQCLKFVP*PLGEMVKHREH Trigger: GTGTTCTCTGTGCTTGACCATCTCACCCAATGGGCAAGGCACAAATTTCAGGCATTGAATGCTGAGAAACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS GCA 72 bp | TCACCTGGAGACTTGCGAAAAAGCGGTTTGAGGCTGTaGTCCAACTCACACAACATGTGTAATCTGACAATA | + |
|
Preference number: 6 (lower is better) Translates to: SPGDLRKSGLRL*SNSHNMCNLTI Trigger: TATTGTCAGATTACACATGTTGTGTGAGTTGGAGCACAGCCTCAAACCGCTTTTTCGCAAGTCTCCAGGTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CCA 72 bp | AATACTTTCATGTTCAAGAATCTGTTCCTTCAGGGATaGCTCGGCTTTCCGAATTGCACTTACTCCAGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: NTFMFKNLFLQG*LGFPNCTYSSH Trigger: GTGGCTGGAGTAAGTGCAATTCGGAAAGCCGAGCCATCCCTGAAGGAACAGATTCTTGAACATGAAAGTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CCA 72 bp | ATCACACCTTGTAGTCGTTGTTCAATGTCAAGAACATaGGTCTTGGCCTTCTCATTGACAACTTCCCCGGTT | + |
|
Preference number: 6 (lower is better) Translates to: ITPCSRCSMSRT*VLAFSLTTSPV Trigger: AACCGGGGAAGTTGTCAATGAGAAGGCCAAGACCCATGTTCTTGACATTGAACAACGACTACAAGGTGTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CAA 72 bp | CTAAACATTCCCCACAGAGTAAGCGAGCTTGAGAGTTaGCATCTTGGCAGCCTTTCAGAATTACCGTCACAA | + |
|
Preference number: 6 (lower is better) Translates to: LNIPHRVSELES*HLGSLSELPSQ Trigger: TTGTGACGGTAATTCTGAAAGGCTGCCAAGATGCAAACTCTCAAGCTCGCTTACTCTGTGGGGAATGTTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CAA 72 bp | TTACAACTGTCACCTGGAGACTTGCGAAAAAGCGGTTaGAGGCTGTGCTCCAACTCACACAACATGTGTAAT | + |
|
Preference number: 6 (lower is better) Translates to: LQLSPGDLRKSG*RLCSNSHNMCN Trigger: ATTACACATGTTGTGTGAGTTGGAGCACAGCCTCAAACCGCTTTTTCGCAAGTCTCCAGGTGACAGTTGTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CAA 90 bp | GAGTCTTCATTACAACTGTCACCTGGAGACTTGCGAAAAAGCGGTTaGAGGCTGTGCTCCAACTCACACAACATGTGTAATCTGACAATA | + |
|
Preference number: 6 (lower is better) Translates to: ESSLQLSPGDLRKSG*RLCSNSHNMCNLTI Trigger: TATTGTCAGATTACACATGTTGTGTGAGTTGGAGCACAGCCTCAAACCGCTTTTTCGCAAGTCTCCAGGTGACAGTTGTAATGAAGACTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CAA 90 bp | CACGCATGGGATAAGAAGACTTTGACACAGCAGTCATCATCCACATaGCTTGCTGAGGATAGGCCAGAAATACCTTGGCTATTATTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: HAWDKKTLTQQSSST*LAEDRPEIPWLLFP Trigger: TGGAAATAATAGCCAAGGTATTTCTGGCCTATCCTCAGCAAGCAATGTGGATGATGACTGCTGTGTCAAAGTCTTCTTATCCCATGCGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS TCA 72 bp | GCCATCAGTTCAGGTGATGTAATATCTCGTGGTCCCTaGTATGGATCATCACTAGATGCAAATGAGGCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: AISSGDVISRGP*YGSSLDANEAS Trigger: ACTTGCCTCATTTGCATCTAGTGATGATCCATATCAGGGACCACGAGATATTACATCACCTGAACTGATGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS TCA 72 bp | GGTTTGTTTTGTGCAAGTTTCTCAGCATTCAATGCCTaGAATTTGTGCCTTGCCCATTGGGTGAGATGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: GLFCASFSAFNA*NLCLAHWVRWS Trigger: TGACCATCTCACCCAATGGGCAAGGCACAAATTTCAGGCATTGAATGCTGAGAAACTTGCACAAAACAAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS TCA 72 bp | AACGAAAGGACGCTACAGCCAGAGTATCCTGAGGTATaGGGTCTAGAAAACGAGTTACACTCTGATAGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: NERTLQPEYPEV*GLENELHSDSL Trigger: AAGACTATCAGAGTGTAACTCGTTTTCTAGACCTCATACCTCAGGATACTCTGGCTGTAGCGTCCTTTCGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS GCA 72 bp | AGATCAGATGCACTGTCTTGGGTACTGATGGCATGCTaGTCATCATGCTTAAGTACTGCCATAATTTCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: RSDALSWVLMAC*SSCLSTAIISA Trigger: TGCAGAAATTATGGCAGTACTTAAGCATGATGAGCAGCATGCCATCAGTACCCAAGACAGTGCATCTGATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS GCA 72 bp | CACAGATCAGATGCACTGTCTTGGGTACTGATGGCATaGTGCTCATCATGCTTAAGTACTGCCATAATTTCT | + |
|
Preference number: 6 (lower is better) Translates to: HRSDALSWVLMA*CSSCLSTAIIS Trigger: AGAAATTATGGCAGTACTTAAGCATGATGAGCAGCATGCCATCAGTACCCAAGACAGTGCATCTGATCTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS GCA 72 bp | CGAATTGCACTTACTCCAGCCACTCCATCTGGCTCATaGATAGCAGCATACAATTTCTGTAGAAATCCAAGA | + |
|
Preference number: 6 (lower is better) Translates to: RIALTPATPSGS*IAAYNFCRNPR Trigger: TCTTGGATTTCTACAGAAATTGTATGCTGCTATGCATGAGCCAGATGGAGTGGCTGGAGTAAGTGCAATTCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CAA 72 bp | GTGCTCGGCTGTTATCAGCATATGCAAGGTAAGCTCTaGTTAGCTCCATTAGCAATCCATAGGCAAAGCTTA | + |
|
Preference number: 6 (lower is better) Translates to: VLGCYQHMQGKL*LAPLAIHRQSL Trigger: TAAGCTTTGCCTATGGATTGCTAATGGAGCTAACAAGAGCTTACCTTGCATATGCTGATAACAGCCGAGCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CAA 72 bp | GATAAGAAGACTTTGACACAGCAGTCATCATCCACATaGCTTGCTGAGGATAGGCCAGAAATACCTTGGCTA | + |
|
Preference number: 6 (lower is better) Translates to: DKKTLTQQSSST*LAEDRPEIPWL Trigger: TAGCCAAGGTATTTCTGGCCTATCCTCAGCAAGCAATGTGGATGATGACTGCTGTGTCAAAGTCTTCTTATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CAA 90 bp | TCTGGCAGAAACAAGGTCACATCCTTGTATTTCTTCATTACTGCGTaGCTTTCAAAGTTAGCCGTTTCTTCCATAAAGCGGCCAACTAGC | + |
|
Preference number: 6 (lower is better) Translates to: SGRNKVTSLYFFITA*LSKLAVSSIKRPTS Trigger: GCTAGTTGGCCGCTTTATGGAAGAAACGGCTAACTTTGAAAGCAACGCAGTAATGAAGAAATACAAGGATGTGACCTTGTTTCTGCCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS TCA 72 bp | TCTTCTTGGAAACAGTGTCAGAAGAAACACACATTTTaGCTGTGCCTGTGGAGAGTAACTATCCCAAACCCT | + |
|
Preference number: 6 (lower is better) Translates to: SSWKQCQKKHTF*LCLWRVTIPNP Trigger: AGGGTTTGGGATAGTTACTCTCCACAGGCACAGTCAAAATGTGTGTTTCTTCTGACACTGTTTCCAAGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CCA 72 bp | GTACTTGGCAAGGTAGAAATGTCCATCTTCCCACTCTaGCAGAAACAAGGTCACATCCTTGTATTTCTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: VLGKVEMSIFPL*QKQGHILVFLH Trigger: ATGAAGAAATACAAGGATGTGACCTTGTTTCTGCCAGAGTGGGAAGATGGACATTTCTACCTTGCCAAGTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CCA 72 bp | TTTTCAGATAAAGCTGCTGACTTTGGTAGCATACACTaGCGAAGCTCCTTTCCTGTCATATACACTCCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: FSDKAADFGSIH*RSSFPVIYTPF Trigger: AAAGGGAGTGTATATGACAGGAAAGGAGCTTCGCCAGTGTATGCTACCAAAGTCAGCAGCTTTATCTGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CAA 72 bp | TCCCATGCTCTGCAGCATAACTCAGGAAAATCATCCTaGAATCTAAGACCAGTTCTCAGTGTGGTCATCATT | + |
|
Preference number: 6 (lower is better) Translates to: SHALQHNSGKSS*NLRPVLSVVII Trigger: AATGATGACCACACTGAGAACTGGTCTTAGATTCAAGGATGATTTTCCTGAGTTATGCTGCAGAGCATGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CAA 90 bp | ACAAAGCAGTCCCATGCTCTGCAGCATAACTCAGGAAAATCATCCTaGAATCTAAGACCAGTTCTCAGTGTGGTCATCATTTTTACTCTC | + |
|
Preference number: 6 (lower is better) Translates to: TKQSHALQHNSGKSS*NLRPVLSVVIIFTL Trigger: GAGAGTAAAAATGATGACCACACTGAGAACTGGTCTTAGATTCAAGGATGATTTTCCTGAGTTATGCTGCAGAGCATGGGACTGCTTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CAA 90 bp | TGTCCTTCAATAGATAATGGCAGCCCTGTTACTCTATTTCGGGTTTaGATCACACCTTGTAGTCGTTGTTCAATGTCAAGAACATGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: CPSIDNGSPVTLFRV*ITPCSRCSMSRTWV Trigger: GACCCATGTTCTTGACATTGAACAACGACTACAAGGTGTGATCAAAACCCGAAATAGAGTAACAGGGCTGCCATTATCTATTGAAGGACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
||
| CDS TCA 72 bp | TGCTGGATAAAATCAAGTAACATCACAGAGGTCGGCTaGGCGTCAGTTTTCTTTACAAGTTCTAGAGCAACA | + |
|
Preference number: 6 (lower is better) Translates to: CWIKSSNITEVG*ASVFFTSSRAT Trigger: TGTTGCTCTAGAACTTGTAAAGAAAACTGACGCTCAGCCGACCTCTGTGATGTTACTTGATTTTATCCAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS TCA 72 bp | TACGCCTCTTTGGTGACACCTCATCATTATTACCACTaGGATTCTCCTGTTGAGCTTGGCATTGAATTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: YASLVTPHHYYH*DSPVELGIEFF Trigger: AAAGAATTCAATGCCAAGCTCAACAGGAGAATCTCAGTGGTAATAATGATGAGGTGTCACCAAAGAGGCGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS TCA 72 bp | ACAGAATTCTTGAGAGTACCACATTCGAGAGAGATCTaGAGGGATTCGGCTTTCTGTTTCAGAACATTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: TEFLRVPHSREI*RDSAFCFRTFH Trigger: ATGGAATGTTCTGAAACAGAAAGCCGAATCCCTTCAGATCTCTCTCGAATGTGGTACTCTCAAGAATTCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS TCA 72 bp | AACATTCATGCTGAGAAGTGGCTTTCAGGTTCTTACTaGACAAGTCCATATGTTCAAAGCAAGGCTCTACTG | + |
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Preference number: 6 (lower is better) Translates to: NIHAEKWLSGSY*TSPYVQSKALL Trigger: CAGTAGAGCCTTGCTTTGAACATATGGACTTGTTCAGTAAGAACCTGAAAGCCACTTCTCAGCATGAATGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS TCA 72 bp | ATTCGAGAGATCAACTGCGAAAAAGCAGTCAAAAACTaGTATGGTGCTAACCGATTTGTGTGCTCTGTGAGT | + |
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Preference number: 6 (lower is better) Translates to: IREINCEKAVKN*YGANRFVCSVS Trigger: ACTCACAGAGCACACAAATCGGTTAGCACCATATCAGTTTTTGACTGCTTTTTCGCAGTTGATCTCTCGAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS GCA 72 bp | TTTTGGTTTGTTTTGTGCAAGTTTCTCAGCATTCAATaGCTGAAATTTGTGCCTTGCCCATTGGGTGAGATG | + |
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Preference number: 6 (lower is better) Translates to: FWFVLCKFLSIQ*LKFVPCPLGEM Trigger: CATCTCACCCAATGGGCAAGGCACAAATTTCAGGCATTGAATGCTGAGAAACTTGCACAAAACAAACCAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CCA 72 bp | GAGCAGATAACTTCACATATTTTCTTGTGTAGCATGTaGCAGGATGGAGTTGCTGCAATCCGTAAAAGTCTT | + |
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Preference number: 6 (lower is better) Translates to: EQITSHIFLCSM*QDGVAAIRKSL Trigger: AAGACTTTTACGGATTGCAGCAACTCCATCCTGCCACATGCTACACAAGAAAATATGTGAAGTTATCTGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CAA 72 bp | CCTCTGCTTCAAAGGGAAAGAGCGTTTTTAGCAGCTTaGACAATGGCTCTTCATACAATTTCAATTGGTCAG | + |
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Preference number: 6 (lower is better) Translates to: PLLQRERAFLAA*TMALHTISIGQ Trigger: CTGACCAATTGAAATTGTATGAAGAGCCATTGTCAAAGCTGCTAAAAACGCTCTTTCCCTTTGAAGCAGAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CAA 90 bp | GGGCCCAATTATAAACTGCTGTTCTCCATTCAAGGAATATTCTTCTaGGAAACAGTGTCAGAAGAAACACACATTTTGACTGTGCCTGTG | + |
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Preference number: 6 (lower is better) Translates to: GPNYKLLFSIQGIFF*ETVSEETHILTVPV Trigger: CACAGGCACAGTCAAAATGTGTGTTTCTTCTGACACTGTTTCCAAGAAGAATATTCCTTGAATGGAGAACAGCAGTTTATAATTGGGCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CAA 90 bp | CTGAATCTTGTGCTCGGCTGTTATCAGCATATGCAAGGTAAGCTCTaGTTAGCTCCATTAGCAATCCATAGGCAAAGCTTAAATCTTCTA | + |
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Preference number: 6 (lower is better) Translates to: LNLVLGCYQHMQGKL*LAPLAIHRQSLNLL Trigger: TAGAAGATTTAAGCTTTGCCTATGGATTGCTAATGGAGCTAACAAGAGCTTACCTTGCATATGCTGATAACAGCCGAGCACAAGATTCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CAA 90 bp | AATGATCCAATGACTGAATTCAATACAACTGTCTTTGGCCTCATTTaGGCCCTGGCTTCCATTCACATTTACAAACATAAGCGGAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: NDPMTEFNTTVFGLI*ALASIHIYKHKRRR Trigger: TCTTCTCCGCTTATGTTTGTAAATGTGAATGGAAGCCAGGGCCAAAATGAGGCCAAAGACAGTTGTATTGAATTCAGTCATTGGATCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CAA 90 bp | TTCTATAAGCCTCTGCTTCAAAGGGAAAGAGCGTTTTTAGCAGCTTaGACAATGGCTCTTCATACAATTTCAATTGGTCAGCATCCATTC | + |
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Preference number: 6 (lower is better) Translates to: FYKPLLQRERAFLAA*TMALHTISIGQHPF Trigger: GAATGGATGCTGACCAATTGAAATTGTATGAAGAGCCATTGTCAAAGCTGCTAAAAACGCTCTTTCCCTTTGAAGCAGAGGCTTATAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CAA 90 bp | GTGCTCTGTGAGTACACTATTTATTTTAGCCAAATCATTTCTCATTaGCAGACGATCAGAACGACCACCTTTTTCCCATTCGTATGCCTT | + |
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Preference number: 6 (lower is better) Translates to: VLCEYTIYFSQIISH*QTIRTTTFFPFVCL Trigger: AAGGCATACGAATGGGAAAAAGGTGGTCGTTCTGATCGTCTGCAAATGAGAAATGATTTGGCTAAAATAAATAGTGTACTCACAGAGCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS TCA 72 bp | CAATTTTGGTTGCAAATAATCAGCCATCAGTTCAGGTaGTGTAATATCTCGTGGTCCCTGATATGGATCATC | + |
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Preference number: 6 (lower is better) Translates to: QFWLQIISHQFR*CNISWSLIWII Trigger: GATGATCCATATCAGGGACCACGAGATATTACATCACCTGAACTGATGGCTGATTATTTGCAACCAAAATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS TCA 72 bp | ATAAATAGAAAGCAACTCCTGAATAGCATAAGCAGCTaGATCTTGTGCTCGGCTGTTATCAGCATATGCAAG | + |
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Preference number: 6 (lower is better) Translates to: INRKQLLNSISS*ILCSAVISICK Trigger: CTTGCATATGCTGATAACAGCCGAGCACAAGATTCAGCTGCTTATGCTATTCAGGAGTTGCTTTCTATTTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS TCA 72 bp | GTTGATTTCTGGGAACTCTTATATCTAGTATTGAGATaGGGCTCTAATATTTCCCGGACATGCTCAGGGAAT | + |
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Preference number: 6 (lower is better) Translates to: VDFWELLYLVLR*GSNISRTCSGN Trigger: ATTCCCTGAGCATGTCCGGGAAATATTAGAGCCTCATCTCAATACTAGATATAAGAGTTCCCAGAAATCAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS TCA 72 bp | TCTGTTCCCATAGGACCCATTCCATTAACCATATTATaGGTCAGTCGAAATGGTACAATTTCCGGAACTTCA | + |
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Preference number: 6 (lower is better) Translates to: SVPIGPIPLTIL*VSRNGTISGTS Trigger: TGAAGTTCCGGAAATTGTACCATTTCGACTGACTCATAATATGGTTAATGGAATGGGTCCTATGGGAACAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS GCA 72 bp | ACATTTACAAACATAAGCGGAGAAGACTTCATGATGTaGTGGATAAAATCAAGTAACATCACAGAGGTCGGC | + |
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Preference number: 6 (lower is better) Translates to: TFTNISGEDFMM*WIKSSNITEVG Trigger: GCCGACCTCTGTGATGTTACTTGATTTTATCCAGCACATCATGAAGTCTTCTCCGCTTATGTTTGTAAATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CAA 72 bp | AACAAGGTCACATCCTTGTATTTCTTCATTACTGCGTaGCTTTCAAAGTTAGCCGTTTCTTCCATAAAGCGG | + |
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Preference number: 6 (lower is better) Translates to: NKVTSLYFFITA*LSKLAVSSIKR Trigger: CCGCTTTATGGAAGAAACGGCTAACTTTGAAAGCAACGCAGTAATGAAGAAATACAAGGATGTGACCTTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CAA 72 bp | ATAGATAATGGCAGCCCTGTTACTCTATTTCGGGTTTaGATCACACCTTGTAGTCGTTGTTCAATGTCAAGA | + |
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Preference number: 6 (lower is better) Translates to: IDNGSPVTLFRV*ITPCSRCSMSR Trigger: TCTTGACATTGAACAACGACTACAAGGTGTGATCAAAACCCGAAATAGAGTAACAGGGCTGCCATTATCTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CAA 90 bp | GTGGAATTGCTTCCATCGACCGATTTGTTGCATAATTCTAGTAGCTaGTCTGTTAAACGAGTTGCATCTCCAACAAACTTTTCTAAAGAC | + |
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Preference number: 6 (lower is better) Translates to: VELLPSTDLLHNSSS*SVKRVASPTNFSKD Trigger: GTCTTTAGAAAAGTTTGTTGGAGATGCAACTCGTTTAACAGACAAGCTACTAGAATTATGCAACAAATCGGTCGATGGAAGCAATTCCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS TCA 72 bp | AGAAAAGTCTTTAAGACACTCATTAAAGGTTCTCTCTaGTCCCTCATCAGTCTCAGTGTAACTTCACATGCT | + |
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Preference number: 6 (lower is better) Translates to: RKVFKTLIKGSL*SLISLSVTSHA Trigger: AGCATGTGAAGTTACACTGAGACTGATGAGGGATCAGAGAGAACCTTTAATGAGTGTCTTAAAGACTTTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CCA 72 bp | ACCCATTCCATTAACCATATTATGAGTCAGTCGAAATaGTACAATTTCCGGAACTTCAAACGTTTCTCCCTT | + |
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Preference number: 6 (lower is better) Translates to: THSINHIMSQSK*YNFRNFKRFSL Trigger: AAGGGAGAAACGTTTGAAGTTCCGGAAATTGTACCATTTCGACTGACTCATAATATGGTTAATGGAATGGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CAA 72 bp | ACTCAAATAAAACATGCCGTGAAGAGTACAGACAAGTaGACCAAGGACAGAAGCAAATTCTTTCTTGACCAT | + |
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Preference number: 6 (lower is better) Translates to: TQIKHAVKSTDK*TKDRSKFFLDH Trigger: ATGGTCAAGAAAGAATTTGCTTCTGTCCTTGGTCAACTTGTCTGTACTCTTCACGGCATGTTTTATTTGAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CAA 72 bp | CTTCCATCGACCGATTTGTTGCATAATTCTAGTAGCTaGTCTGTTAAACGAGTTGCATCTCCAACAAACTTT | + |
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Preference number: 6 (lower is better) Translates to: LPSTDLLHNSSS*SVKRVASPTNF Trigger: AAAGTTTGTTGGAGATGCAACTCGTTTAACAGACAAGCTACTAGAATTATGCAACAAATCGGTCGATGGAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CAA 72 bp | CTCATGCTTAATGTGGAATTGCTTCCATCGACCGATTaGTTGCATAATTCTAGTAGCTTGTCTGTTAAACGA | + |
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Preference number: 6 (lower is better) Translates to: LMLNVELLPSTD*LHNSSSLSVKR Trigger: TCGTTTAACAGACAAGCTACTAGAATTATGCAACAAATCGGTCGATGGAAGCAATTCCACATTAAGCATGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CAA 90 bp | CACCTCATCATTATTACCACTGAGATTCTCCTGTTGAGCTTGGCATaGAATTCTTTCAATAATTTCCTTACTTTCCATTTTCAAGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: HLIIITTEILLLSLA*NSFNNFLTFHFQGC Trigger: GCAGCCTTGAAAATGGAAAGTAAGGAAATTATTGAAAGAATTCAATGCCAAGCTCAACAGGAGAATCTCAGTGGTAATAATGATGAGGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CAA 90 bp | AGACATCCAAGTTACTACTACTGGAGGTTTCTTCTTATATTTGTGTaGATGATCCTTGACATTATGGCCATCCATGTCTTGATGAGAACA | + |
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Preference number: 6 (lower is better) Translates to: RHPSYYYWRFLLIFV*MILDIMAIHVLMRT Trigger: TGTTCTCATCAAGACATGGATGGCCATAATGTCAAGGATCATCAACACAAATATAAGAAGAAACCTCCAGTAGTAGTAACTTGGATGTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS TCA 72 bp | GTTGCTGCAATCCGTAAAAGTCTTGTAATGATCCAATaGCTGAATTCAATACAACTGTCTTTGGCCTCATTT | + |
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Preference number: 6 (lower is better) Translates to: VAAIRKSLVMIQ*LNSIQLSLASF Trigger: AAATGAGGCCAAAGACAGTTGTATTGAATTCAGTCATTGGATCATTACAAGACTTTTACGGATTGCAGCAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS TCA 72 bp | GCCATAGCGATAACATTCGTGGCATTGACTGATATATaGACTGATTTCCATACTGAAGAGATCTTCCAAAAT | + |
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Preference number: 6 (lower is better) Translates to: AIAITFVALTDI*TDFHTEEIFQN Trigger: ATTTTGGAAGATCTCTTCAGTATGGAAATCAGTTCATATATCAGTCAATGCCACGAATGTTATCGCTATGGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS GCA 72 bp | ACTTCAATAAATTCTACATTTTGCACGTTCATGAACTaGAAAGGAGCTGGCTGTAAACATCCCATATGTTCA | + |
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Preference number: 6 (lower is better) Translates to: TSINSTFCTFMN*KGAGCKHPICS Trigger: TGAACATATGGGATGTTTACAGCCAGCTCCTTTGCAGTTCATGAACGTGCAAAATGTAGAATTTATTGAAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CAA 72 bp | ATGCTTAATGTGGAATTGCTTCCATCGACCGATTTGTaGCATAATTCTAGTAGCTTGTCTGTTAAACGAGTT | + |
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Preference number: 6 (lower is better) Translates to: MLNVELLPSTDL*HNSSSLSVKRV Trigger: AACTCGTTTAACAGACAAGCTACTAGAATTATGCAACAAATCGGTCGATGGAAGCAATTCCACATTAAGCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CAA 90 bp | CGACCGATTTGTTGCATAATTCTAGTAGCTTGTCTGTTAAACGAGTaGCATCTCCAACAAACTTTTCTAAAGACTTTTTCATATGGATGG | + |
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Preference number: 6 (lower is better) Translates to: RPICCIILVACLLNE*HLQQTFLKTFSYGW Trigger: CCATCCATATGAAAAAGTCTTTAGAAAAGTTTGTTGGAGATGCAACTCGTTTAACAGACAAGCTACTAGAATTATGCAACAAATCGGTCG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS TCA 72 bp | AGAGCATTCCACATAACTCTTCCAGAACATGATCCTTaGATGAACTTTTTACTTGCATATACATCAGAGCAT | + |
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Preference number: 6 (lower is better) Translates to: RAFHITLPEHDP*MNFLLAYTSEH Trigger: ATGCTCTGATGTATATGCAAGTAAAAAGTTCATTCAAGGATCATGTTCTGGAAGAGTTATGTGGAATGCTCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CAA 72 bp | ACAAACTTTTCTAAAGACTTTTTCATATGGATGGCTTaGGTAAGAATTTCCTTGCATCTGTTCACACGCATG | + |
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Preference number: 6 (lower is better) Translates to: TNFSKDFFIWMA*VRISLHLFTRM Trigger: CATGCGTGTGAACAGATGCAAGGAAATTCTTACCAAAGCCATCCATATGAAAAAGTCTTTAGAAAAGTTTGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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| CDS CAA 72 bp | TATAAACTGCTGTTCTCCATTCAAGGAATATTCTTCTaGGAAACAGTGTCAGAAGAAACACACATTTTGACT | + |
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Preference number: 6 (lower is better) Translates to: YKLLFSIQGIFF*ETVSEETHILT Trigger: AGTCAAAATGTGTGTTTCTTCTGACACTGTTTCCAAGAAGAATATTCCTTGAATGGAGAACAGCAGTTTATA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034980.9 ENSMUST00000215311.2 |
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