Pregenerated sensors for ATPSCKMT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039065Ensembl transcript IDs: ENSMUST00000042702.7, ENSMUST00000161061.3
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGACACCAGGGCTCAGAGACATTAAGTCACTGTCCAAGGCCTCCTaGAGGGAACAGGAACTCTGCTCAGATTCCAAAGCTCACTCCCTA | + |
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Preference number: 1 (lower is better) Translates to: QTPGLRDIKSLSKAS*REQELCSDSKAHSL Trigger: TAGGGAGTGAGCTTTGGAATCTGAGCAGAGTTCCTGTTCCCTGCAGGAGGCCTTGGACAGTGACTTAATGTCTCTGAGCCCTGGTGTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161061.3 |
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| 3UTR GCA 90 bp | GACATTAAGTCACTGTCCAAGGCCTCCTGCAGGGAACAGGAACTCTaGTCAGATTCCAAAGCTCACTCCCTATTCACCCTTACTGACCAA | + |
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Preference number: 1 (lower is better) Translates to: DIKSLSKASCREQEL*SDSKAHSLFTLTDQ Trigger: TTGGTCAGTAAGGGTGAATAGGGAGTGAGCTTTGGAATCTGAGCAGAGTTCCTGTTCCCTGCAGGAGGCCTTGGACAGTGACTTAATGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161061.3 |
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| 3UTR TCA 90 bp | GGAACTCTGCTCAGATTCCAAAGCTCACTCCCTATTCACCCTTACTaGCCAATACACAGATCCCAGCCAGAGCTCAGTCACTCACTGTTA | + |
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Preference number: 1 (lower is better) Translates to: GTLLRFQSSLPIHPY*PIHRSQPELSHSLL Trigger: TAACAGTGAGTGACTGAGCTCTGGCTGGGATCTGTGTATTGGTCAGTAAGGGTGAATAGGGAGTGAGCTTTGGAATCTGAGCAGAGTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161061.3 |
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| 3UTR GCA 90 bp | ACAGAAATTCAGTCATGGACAAAACCACAGGAAACTGCAGGTGTTTaGCTAAGTGCCCTGCCCTCTTCACCCGAGCCATTAAACCATGCT | + |
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Preference number: 1 (lower is better) Translates to: TEIQSWTKPQETAGV*LSALPSSPEPLNHA Trigger: AGCATGGTTTAATGGCTCGGGTGAAGAGGGCAGGGCACTTAGGCAAACACCTGCAGTTTCCTGTGGTTTTGTCCATGACTGAATTTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042702.7 ENSMUST00000161061.3 |
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| 3UTR CCA 90 bp | AACATGAAAGTCCCATTAGGACCTGTGGGATTTAGATCCCAGATGTaGGAGGGGAGTCCCATCTTTTCTCTGACAAGAGCACATGAGCTG | + |
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Preference number: 1 (lower is better) Translates to: NMKVPLGPVGFRSQM*EGSPIFSLTRAHEL Trigger: CAGCTCATGTGCTCTTGTCAGAGAAAAGATGGGACTCCCCTCCCACATCTGGGATCTAAATCCCACAGGTCCTAATGGGACTTTCATGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161061.3 |
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| 3UTR TCA 90 bp | AAATACTGTTGGCAGAGCAAAGACTGTGTGGTTAGGTTTAAAAACTaGTCCCCAGACCCATGTCCAGTGTGTCACTGTCCTGGTGGCAGA | + |
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Preference number: 1 (lower is better) Translates to: KYCWQSKDCVVRFKN*SPDPCPVCHCPGGR Trigger: TCTGCCACCAGGACAGTGACACACTGGACATGGGTCTGGGGATCAGTTTTTAAACCTAACCACACAGTCTTTGCTCTGCCAACAGTATTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161061.3 |
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| 3UTR GCA 90 bp | GGGGAGCAGCAGTCGACAAATGATTTAATGCCTACACCTTCCATGTaGTCCTCACAGACATACAAAGCTTCTATTTCTTCAGAGAGCTGT | + |
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Preference number: 1 (lower is better) Translates to: GEQQSTNDLMPTPSM*SSQTYKASISSESC Trigger: ACAGCTCTCTGAAGAAATAGAAGCTTTGTATGTCTGTGAGGAGCACATGGAAGGTGTAGGCATTAAATCATTTGTCGACTGCTGCTCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161061.3 |
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| 3UTR TCA 90 bp | CTTCTCATCACAAACCAGCAGAGCCTCAACAGACATCACGTGTCATaGATGATCGATGAAATACATGTATCCCAATTGGTCCTTGCTTAC | + |
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Preference number: 1 (lower is better) Translates to: LLITNQQSLNRHHVS*MIDEIHVSQLVLAY Trigger: GTAAGCAAGGACCAATTGGGATACATGTATTTCATCGATCATTCATGACACGTGATGTCTGTTGAGGCTCTGCTGGTTTGTGATGAGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161061.3 |
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| 3UTR GCA 90 bp | CCGTGTGAAACTGCCCTTCAAAAAGCAGCAGAGCTTAAACTTAAATaGTTCTCTGAGTTCTGTTCATTTTCTCAAGAACGGAAGATTAGC | + |
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Preference number: 1 (lower is better) Translates to: PCETALQKAAELKLK*FSEFCSFSQERKIS Trigger: GCTAATCTTCCGTTCTTGAGAAAATGAACAGAACTCAGAGAAGCATTTAAGTTTAAGCTCTGCTGCTTTTTGAAGGGCAGTTTCACACGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042702.7 ENSMUST00000161061.3 |
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| 3UTR-3UTR TCA 90 bp | TGGTGGCAGACACCAGGGCTCAGAGACATTAAGTCACTGTCCAAGGCCTCCTGCACCATGCTGCTGAGATaGTACCTTCTGACCCACAGA | + |
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Preference number: 2 (lower is better) Translates to: WWQTPGLRDIKSLSKASCTMLLR*YLLTHR Trigger: TCTGTGGGTCAGAAGGTATCATCTCAGCAGCATGGT...GCAGGAGGCCTTGGACAGTGACTTAATGTCTCTGAGCCCTGGTGTCTGCCACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161061.3 |
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| 3UTR-3UTR GCA 90 bp | ACCACAGGAAACTGCAGGTGTTTGCCTAAGTGCCCTGCCCTCTTCACCCGAGCCTTACTTATATCTTCATaGACCCTATCCAGGATGTCC | + |
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Preference number: 2 (lower is better) Translates to: TTGNCRCLPKCPALFTRALLISS*TLSRMS Trigger: GGACATCCTGGATAGGGTGCATGAAGATATAAGTAA...GGCTCGGGTGAAGAGGGCAGGGCACTTAGGCAAACACCTGCAGTTTCCTGTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042702.7 ENSMUST00000161061.3 |
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| 3UTR CAA 90 bp | TACAGAAATTCAGTCATGGACAAAACCACAGGAAACTGCAGGTGTTaGCCTAAGTGCCCTGCCCTCTTCACCCGAGCCATTAAACCATGC | + |
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Preference number: 2 (lower is better) Translates to: YRNSVMDKTTGNCRC*PKCPALFTRAIKPC Trigger: GCATGGTTTAATGGCTCGGGTGAAGAGGGCAGGGCACTTAGGCAAACACCTGCAGTTTCCTGTGGTTTTGTCCATGACTGAATTTCTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042702.7 ENSMUST00000161061.3 |
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| 3UTR-3UTR TCA 90 bp | TTAGCTACACACTACAGAAATTCAGTCATGGACAAAACCACAGGAAACTGCAGGCCACCCCAGGCCGTGTaGAACTGCCCTTCAAAAAGC | + |
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Preference number: 2 (lower is better) Translates to: LATHYRNSVMDKTTGNCRPPQAV*NCPSKS Trigger: GCTTTTTGAAGGGCAGTTTCACACGGCCTGGGGTGG...CCTGCAGTTTCCTGTGGTTTTGTCCATGACTGAATTTCTGTAGTGTGTAGCTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000042702.7 ENSMUST00000161061.3 |
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| 3UTR-3UTR TCA 90 bp | TTAGGACCTGTGGGATTTAGATCCCAGATGTGGGAGGGGAGTCCCATCTTTTCTCCTATTCACCCTTACTaGCCAATACACAGATCCCAG | + |
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Preference number: 2 (lower is better) Translates to: LGPVGFRSQMWEGSPIFSPIHPY*PIHRSQ Trigger: CTGGGATCTGTGTATTGGTCAGTAAGGGTGAATAGG...AGAAAAGATGGGACTCCCCTCCCACATCTGGGATCTAAATCCCACAGGTCCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161061.3 |
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| 3UTR-3UTR CCA 90 bp | CAGCAGTCGACAAATGATTTAATGCCTACACCTTCCATGTGCTCCTCACAGACAAGGAGCACCTTTTACTaGGCAGGTAGAAGTGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: QQSTNDLMPTPSMCSSQTRSTFY*AGRSGR Trigger: CCTTCCACTTCTACCTGCCCAGTAAAAGGTGCTCCT...TGTCTGTGAGGAGCACATGGAAGGTGTAGGCATTAAATCATTTGTCGACTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161061.3 |
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| 3UTR-3UTR TCA 90 bp | TTAGCTACACACTACAGAAATTCAGTCATGGACAAAACCACAGGAAACTGCAGGACCATGCTGCTGAGATaGTACCTTCTGACCCACAGA | + |
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Preference number: 2 (lower is better) Translates to: LATHYRNSVMDKTTGNCRTMLLR*YLLTHR Trigger: TCTGTGGGTCAGAAGGTATCATCTCAGCAGCATGGT...CCTGCAGTTTCCTGTGGTTTTGTCCATGACTGAATTTCTGTAGTGTGTAGCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042702.7 ENSMUST00000161061.3 |
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| 3UTR-3UTR TCA 90 bp | CTCACAGACATACAAAGCTTCTATTTCTTCAGAGAGCTGTTTCTACATTCTACATCTGACAAGAGCACATaGGCTGAGCTGCCACCACTC | + |
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Preference number: 2 (lower is better) Translates to: LTDIQSFYFFRELFLHSTSDKST*AELPPL Trigger: GAGTGGTGGCAGCTCAGCTCATGTGCTCTTGTCAGA...TGTAGAATGTAGAAACAGCTCTCTGAAGAAATAGAAGCTTTGTATGTCTGTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161061.3 |
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| 3UTR-3UTR GCA 90 bp | CCTGTGGGATTTAGATCCCAGATGTGGGAGGGGAGTCCCATCTTTTCTCTGACAGAGCTTAAACTTAAATaGTTCTCTGAGTTCTGTTCA | + |
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Preference number: 2 (lower is better) Translates to: PVGFRSQMWEGSPIFSLTELKLK*FSEFCS Trigger: TGAACAGAACTCAGAGAAGCATTTAAGTTTAAGCTC...TGTCAGAGAAAAGATGGGACTCCCCTCCCACATCTGGGATCTAAATCCCACAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161061.3 |
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| 3UTR-3UTR GCA 90 bp | ATGTCTTCTCATCACAAACCAGCAGAGCCTCAACAGACATCACGTGTCATGAATATCCCAATTGGTCCTTaGTTACAAGGAAGATATCAA | + |
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Preference number: 2 (lower is better) Translates to: MSSHHKPAEPQQTSRVMNIPIGP*LQGRYQ Trigger: TTGATATCTTCCTTGTAAGCAAGGACCAATTGGGAT...ATTCATGACACGTGATGTCTGTTGAGGCTCTGCTGGTTTGTGATGAGAAGACAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161061.3 |
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| 3UTR-3UTR GCA 90 bp | CACTACAGAAATTCAGTCATGGACAAAACCACAGGAAACTGCAGGTGTTTGCCTGAGCTTAAACTTAAATaGTTCTCTGAGTTCTGTTCA | + |
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Preference number: 2 (lower is better) Translates to: HYRNSVMDKTTGNCRCLPELKLK*FSEFCS Trigger: TGAACAGAACTCAGAGAAGCATTTAAGTTTAAGCTC...AGGCAAACACCTGCAGTTTCCTGTGGTTTTGTCCATGACTGAATTTCTGTAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042702.7 ENSMUST00000161061.3 |
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| 3UTR-3UTR CCA 90 bp | CTCACAGACATACAAAGCTTCTATTTCTTCAGAGAGCTGTTTCTACATTCTACAAGAGCAAAGACTGTGTaGTTAGGTTTAAAAACTGAT | + |
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Preference number: 2 (lower is better) Translates to: LTDIQSFYFFRELFLHSTRAKTV*LGLKTD Trigger: ATCAGTTTTTAAACCTAACCACACAGTCTTTGCTCT...TGTAGAATGTAGAAACAGCTCTCTGAAGAAATAGAAGCTTTGTATGTCTGTGAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161061.3 |
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| 3UTR CCA 72 bp | ATCCCCAGACCCATGTCCAGTGTGTCACTGTCCTGGTaGCAGACACCAGGGCTCAGAGACATTAAGTCACTG | + |
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Preference number: 3 (lower is better) Translates to: IPRPMSSVSLSW*QTPGLRDIKSL Trigger: CAGTGACTTAATGTCTCTGAGCCCTGGTGTCTGCCACCAGGACAGTGACACACTGGACATGGGTCTGGGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161061.3 |
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| 3UTR CCA 72 bp | CCCTATCCAGGATGTCCCACTAGGAGCACCTTTTACTaGGCAGGTAGAAGTGGAAGGATCAGAAGTTCCGGG | + |
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Preference number: 3 (lower is better) Translates to: PYPGCPTRSTFY*AGRSGRIRSSG Trigger: CCCGGAACTTCTGATCCTTCCACTTCTACCTGCCCAGTAAAAGGTGCTCCTAGTGGGACATCCTGGATAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042702.7 ENSMUST00000161061.3 |
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| 3UTR GCA 72 bp | GACAAAACCACAGGAAACTGCAGGTGTTTGCCTAAGTaGCCTGCCCTCTTCACCCGAGCCATTAAACCATGC | + |
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Preference number: 3 (lower is better) Translates to: DKTTGNCRCLPK*PALFTRAIKPC Trigger: GCATGGTTTAATGGCTCGGGTGAAGAGGGCAGGGCACTTAGGCAAACACCTGCAGTTTCCTGTGGTTTTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042702.7 ENSMUST00000161061.3 |
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| 3UTR GCA 72 bp | CAGTCATGGACAAAACCACAGGAAACTGCAGGTGTTTaGCTAAGTGCCCTGCCCTCTTCACCCGAGCCATTA | + |
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Preference number: 3 (lower is better) Translates to: QSWTKPQETAGV*LSALPSSPEPL Trigger: TAATGGCTCGGGTGAAGAGGGCAGGGCACTTAGGCAAACACCTGCAGTTTCCTGTGGTTTTGTCCATGACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042702.7 ENSMUST00000161061.3 |
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| 3UTR TCA 72 bp | GAGCTGCCACCACTCAGGATTCACTTTTCCGATCTATaGAGCCTGTCTACTCACACGCAAAGGTCGTCCCTA | + |
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Preference number: 3 (lower is better) Translates to: ELPPLRIHFSDL*SLSTHTQRSSL Trigger: TAGGGACGACCTTTGCGTGTGAGTAGACAGGCTTCATAGATCGGAAAAGTGAATCCTGAGTGGTGGCAGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161061.3 |
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| 3UTR CCA 72 bp | GTCCCATTAGGACCTGTGGGATTTAGATCCCAGATGTaGGAGGGGAGTCCCATCTTTTCTCTGACAAGAGCA | + |
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Preference number: 3 (lower is better) Translates to: VPLGPVGFRSQM*EGSPIFSLTRA Trigger: TGCTCTTGTCAGAGAAAAGATGGGACTCCCCTCCCACATCTGGGATCTAAATCCCACAGGTCCTAATGGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161061.3 |
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| 3UTR TCA 72 bp | CTCAGATTCCAAAGCTCACTCCCTATTCACCCTTACTaGCCAATACACAGATCCCAGCCAGAGCTCAGTCAC | + |
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Preference number: 3 (lower is better) Translates to: LRFQSSLPIHPY*PIHRSQPELSH Trigger: GTGACTGAGCTCTGGCTGGGATCTGTGTATTGGTCAGTAAGGGTGAATAGGGAGTGAGCTTTGGAATCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161061.3 |
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| 3UTR TCA 72 bp | CTCAGTCACTCACTGTTAAACCTTCTCTCTTCTCCCTaGGCCAAGGATGTTCCCGAAAAGCCTCATCAGATC | + |
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Preference number: 3 (lower is better) Translates to: LSHSLLNLLSSP*AKDVPEKPHQI Trigger: GATCTGATGAGGCTTTTCGGGAACATCCTTGGCTCAGGGAGAAGAGAGAAGGTTTAACAGTGAGTGACTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161061.3 |
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| 3UTR TCA 72 bp | TGGCAGAGCAAAGACTGTGTGGTTAGGTTTAAAAACTaGTCCCCAGACCCATGTCCAGTGTGTCACTGTCCT | + |
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Preference number: 3 (lower is better) Translates to: WQSKDCVVRFKN*SPDPCPVCHCP Trigger: AGGACAGTGACACACTGGACATGGGTCTGGGGATCAGTTTTTAAACCTAACCACACAGTCTTTGCTCTGCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161061.3 |
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| 3UTR GCA 72 bp | CCCATCTTTTCTCTGACAAGAGCACATGAGCTGAGCTaGCACCACTCAGGATTCACTTTTCCGATCTATGAA | + |
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Preference number: 3 (lower is better) Translates to: PIFSLTRAHELS*HHSGFTFPIYE Trigger: TTCATAGATCGGAAAAGTGAATCCTGAGTGGTGGCAGCTCAGCTCATGTGCTCTTGTCAGAGAAAAGATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161061.3 |
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| 3UTR-3UTR CAA 90 bp | ATGTCTTCTCATCACAAACCAGCAGAGCCTCAACAGACATCACGTGTCATGAATTATCCCAATTGGTCCTaGCTTACAAGGAAGATATCA | + |
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Preference number: 3 (lower is better) Translates to: MSSHHKPAEPQQTSRVMNYPNWS*LTRKIS Trigger: TGATATCTTCCTTGTAAGCAAGGACCAATTGGGATA...ATTCATGACACGTGATGTCTGTTGAGGCTCTGCTGGTTTGTGATGAGAAGACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161061.3 |
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| 3UTR GCA 72 bp | CAGTCGACAAATGATTTAATGCCTACACCTTCCATGTaGTCCTCACAGACATACAAAGCTTCTATTTCTTCA | + |
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Preference number: 3 (lower is better) Translates to: QSTNDLMPTPSM*SSQTYKASISS Trigger: TGAAGAAATAGAAGCTTTGTATGTCTGTGAGGAGCACATGGAAGGTGTAGGCATTAAATCATTTGTCGACTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161061.3 |
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| 3UTR-3UTR CAA 90 bp | CTCACAGACATACAAAGCTTCTATTTCTTCAGAGAGCTGTTTCTACATTCTACAATACATGTATCCCAATaGGTCCTTGCTTACAAGGAA | + |
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Preference number: 3 (lower is better) Translates to: LTDIQSFYFFRELFLHSTIHVSQ*VLAYKE Trigger: TTCCTTGTAAGCAAGGACCAATTGGGATACATGTAT...TGTAGAATGTAGAAACAGCTCTCTGAAGAAATAGAAGCTTTGTATGTCTGTGAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161061.3 |
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| CDS-3UTR TCA 90 bp | ACCACAGGAAACTGCAGGTGTTTGCCTAAGTGCCCTGCCCTCTTCACCCGAGCCGCTCCGTGTCTCAGATaGGGAGGCCTGCAGGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: TTGNCRCLPKCPALFTRAAPCLR*GGLQAC Trigger: GCAGGCCTGCAGGCCTCCTCATCTGAGACACGGAGC...GGCTCGGGTGAAGAGGGCAGGGCACTTAGGCAAACACCTGCAGTTTCCTGTGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042702.7 ENSMUST00000161061.3 |
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| CDS-3UTR GCA 90 bp | GGAAACTGCAGGTGTTTGCCTAAGTGCCCTGCCCTCTTCACCCGAGCCATTAAATCAGATGAGGAGGCCTaGAGGCCTGCTGTCTCCGAG | + |
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Preference number: 4 (lower is better) Translates to: GNCRCLPKCPALFTRAIKSDEEA*RPAVSE Trigger: CTCGGAGACAGCAGGCCTGCAGGCCTCCTCATCTGA...TTTAATGGCTCGGGTGAAGAGGGCAGGGCACTTAGGCAAACACCTGCAGTTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042702.7 ENSMUST00000161061.3 |
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| CDS-3UTR CCA 90 bp | AGCACCTTTTACTGGGCAGGTAGAAGTGGAAGGATCAGAAGTTCCGGGTCATCGGTCTGGAGTCCAGCGTaGGAACGGGAACCGACAGGC | + |
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Preference number: 4 (lower is better) Translates to: STFYWAGRSGRIRSSGSSVWSPA*EREPTG Trigger: GCCTGTCGGTTCCCGTTCCCACGCTGGACTCCAGAC...CGATGACCCGGAACTTCTGATCCTTCCACTTCTACCTGCCCAGTAAAAGGTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042702.7 ENSMUST00000161061.3 |
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| CDS-3UTR CCA 90 bp | TACTGGGCAGGTAGAAGTGGAAGGATCAGAAGTTCCGGGTCATCGTGCTCAGTAGTCTGGAGTCCAGCGTaGGAACGGGAACCGACAGGC | + |
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Preference number: 4 (lower is better) Translates to: YWAGRSGRIRSSGSSCSVVWSPA*EREPTG Trigger: GCCTGTCGGTTCCCGTTCCCACGCTGGACTCCAGAC...TACTGAGCACGATGACCCGGAACTTCTGATCCTTCCACTTCTACCTGCCCAGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042702.7 ENSMUST00000161061.3 |
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| CDS-3UTR TCA 90 bp | AGCCTGTCTACTCACACGCAAAGGTCGTCCCTAACTTGTCTTCCCTCTAAATCAGCTCCGTGTCTCAGATaGGGAGGCCTGCAGGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: SLSTHTQRSSLTCLPSKSAPCLR*GGLQAC Trigger: GCAGGCCTGCAGGCCTCCTCATCTGAGACACGGAGC...TGATTTAGAGGGAAGACAAGTTAGGGACGACCTTTGCGTGTGAGTAGACAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161061.3 |
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| CDS-3UTR GCA 90 bp | TATCCAGGATGTCCCACTAGGAGCACCTTTTACTGGGCAGGTAGAAGTGGAAGGTCAGATGAGGAGGCCTaGAGGCCTGCTGTCTCCGAG | + |
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Preference number: 4 (lower is better) Translates to: YPGCPTRSTFYWAGRSGRSDEEA*RPAVSE Trigger: CTCGGAGACAGCAGGCCTGCAGGCCTCCTCATCTGA...CCTTCCACTTCTACCTGCCCAGTAAAAGGTGCTCCTAGTGGGACATCCTGGATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042702.7 ENSMUST00000161061.3 |
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| CDS-3UTR TCA 90 bp | ACCACAGGAAACTGCAGGTGTTTGCCTAAGTGCCCTGCCCTCTTCACCCGAGCCAGTACTGTGCAAAGGTaGCCTTCCAGAGATCTGAAA | + |
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Preference number: 4 (lower is better) Translates to: TTGNCRCLPKCPALFTRASTVQR*PSRDLK Trigger: TTTCAGATCTCTGGAAGGTCACCTTTGCACAGTACT...GGCTCGGGTGAAGAGGGCAGGGCACTTAGGCAAACACCTGCAGTTTCCTGTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042702.7 ENSMUST00000161061.3 |
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| CDS-3UTR GCA 90 bp | ACTGCAGGTGTTTGCCTAAGTGCCCTGCCCTCTTCACCCGAGCCATTAAACCATATACACTGTCAGCAGTaGACCACCAACGACCCCAGT | + |
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Preference number: 4 (lower is better) Translates to: TAGVCLSALPSSPEPLNHIHCQQ*TTNDPS Trigger: ACTGGGGTCGTTGGTGGTGCACTGCTGACAGTGTAT...ATGGTTTAATGGCTCGGGTGAAGAGGGCAGGGCACTTAGGCAAACACCTGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042702.7 |
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| CDS-3UTR CCA 90 bp | TACTGGGCAGGTAGAAGTGGAAGGATCAGAAGTTCCGGGTCATCGTGCTCAGTACTTCTTCTCCAGCTGTaGCATCATCTGGGGCACACC | + |
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Preference number: 4 (lower is better) Translates to: YWAGRSGRIRSSGSSCSVLLLQL*HHLGHT Trigger: GGTGTGCCCCAGATGATGCCACAGCTGGAGAAGAAG...TACTGAGCACGATGACCCGGAACTTCTGATCCTTCCACTTCTACCTGCCCAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042702.7 ENSMUST00000161061.3 |
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| CDS-3UTR CCA 90 bp | AGTAAGTGCAAGGCCACCCCAGGCCGTGTGAAACTGCCCTTCAAAAAGCAGCAGTCAAGAATCCCCAACTaGTCCTCTTTGAACTGTCGG | + |
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Preference number: 4 (lower is better) Translates to: SKCKATPGRVKLPFKKQQSRIPN*SSLNCR Trigger: CCGACAGTTCAAAGAGGACCAGTTGGGGATTCTTGA...CTGCTGCTTTTTGAAGGGCAGTTTCACACGGCCTGGGGTGGCCTTGCACTTACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042702.7 |
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| CDS-3UTR GCA 90 bp | TATCCAGGATGTCCCACTAGGAGCACCTTTTACTGGGCAGGTAGAAGTGGAAGGTGGGAAGCCTTCCTTTaGAGCTGCAATCACAATCCG | + |
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Preference number: 4 (lower is better) Translates to: YPGCPTRSTFYWAGRSGRWEAFL*SCNHNP Trigger: CGGATTGTGATTGCAGCTGCAAAGGAAGGCTTCCCA...CCTTCCACTTCTACCTGCCCAGTAAAAGGTGCTCCTAGTGGGACATCCTGGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042702.7 ENSMUST00000161061.3 |
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| CDS-3UTR GCA 90 bp | CACACTACAGAAATTCAGTCATGGACAAAACCACAGGAAACTGCAGGTGTTTGCAACTTGGCAGAGCCATaGACGCCTGCCCTCCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: HTTEIQSWTKPQETAGVCNLAEP*TPALQA Trigger: TGCCTGGAGGGCAGGCGTGCATGGCTCTGCCAAGTT...GCAAACACCTGCAGTTTCCTGTGGTTTTGTCCATGACTGAATTTCTGTAGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042702.7 ENSMUST00000161061.3 |
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| CDS-3UTR TCA 90 bp | TGGTGGCAGACACCAGGGCTCAGAGACATTAAGTCACTGTCCAAGGCCTCCTGCGACCTTCCAGAGATCTaGAATATAAAACTTGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: WWQTPGLRDIKSLSKASCDLPEI*NIKLGR Trigger: TCTGCCAAGTTTTATATTTCAGATCTCTGGAAGGTC...GCAGGAGGCCTTGGACAGTGACTTAATGTCTCTGAGCCCTGGTGTCTGCCACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161061.3 |
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| CDS-3UTR TCA 90 bp | TATCCAGGATGTCCCACTAGGAGCACCTTTTACTGGGCAGGTAGAAGTGGAAGGGGGGCACACCAAAAATaGCAACATTGGAGTACTGTG | + |
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Preference number: 4 (lower is better) Translates to: YPGCPTRSTFYWAGRSGRGAHQK*QHWSTV Trigger: CACAGTACTCCAATGTTGTCATTTTTGGTGTGCCCC...CCTTCCACTTCTACCTGCCCAGTAAAAGGTGCTCCTAGTGGGACATCCTGGATA 50% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000042702.7 ENSMUST00000161061.3 |
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| CDS-3UTR GCA 90 bp | AGCACCTTTTACTGGGCAGGTAGAAGTGGAAGGATCAGAAGTTCCGGGTCATCGAACATTGGAGTACTGTaGAAAGGTGACCTTCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: STFYWAGRSGRIRSSGSSNIGVL*KGDLPE Trigger: CTCTGGAAGGTCACCTTTGCACAGTACTCCAATGTT...CGATGACCCGGAACTTCTGATCCTTCCACTTCTACCTGCCCAGTAAAAGGTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042702.7 ENSMUST00000161061.3 |
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| CDS-3UTR TCA 90 bp | AGCACCTTTTACTGGGCAGGTAGAAGTGGAAGGATCAGAAGTTCCGGGTCATCGGACCTTCCAGAGATCTaGAATATAAAACTTGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: STFYWAGRSGRIRSSGSSDLPEI*NIKLGR Trigger: TCTGCCAAGTTTTATATTTCAGATCTCTGGAAGGTC...CGATGACCCGGAACTTCTGATCCTTCCACTTCTACCTGCCCAGTAAAAGGTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042702.7 ENSMUST00000161061.3 |
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| CDS-3UTR GCA 90 bp | ATGTCTTCTCATCACAAACCAGCAGAGCCTCAACAGACATCACGTGTCATGAATTGGGAAGCCTTCCTTTaGAGCTGCAATCACAATCCG | + |
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Preference number: 4 (lower is better) Translates to: MSSHHKPAEPQQTSRVMNWEAFL*SCNHNP Trigger: CGGATTGTGATTGCAGCTGCAAAGGAAGGCTTCCCA...ATTCATGACACGTGATGTCTGTTGAGGCTCTGCTGGTTTGTGATGAGAAGACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161061.3 |
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| CDS-3UTR CCA 90 bp | TTTAATGCCTACACCTTCCATGTGCTCCTCACAGACATACAAAGCTTCTATTTCCTTCTTCTCCAGCTGTaGCATCATCTGGGGCACACC | + |
|
Preference number: 4 (lower is better) Translates to: FNAYTFHVLLTDIQSFYFLLLQL*HHLGHT Trigger: GGTGTGCCCCAGATGATGCCACAGCTGGAGAAGAAG...GAAATAGAAGCTTTGTATGTCTGTGAGGAGCACATGGAAGGTGTAGGCATTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161061.3 |
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| CDS-3UTR GCA 90 bp | TCTTCTCATCACAAACCAGCAGAGCCTCAACAGACATCACGTGTCATGAATGATAACATTGGAGTACTGTaGAAAGGTGACCTTCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: SSHHKPAEPQQTSRVMNDNIGVL*KGDLPE Trigger: CTCTGGAAGGTCACCTTTGCACAGTACTCCAATGTT...ATCATTCATGACACGTGATGTCTGTTGAGGCTCTGCTGGTTTGTGATGAGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161061.3 |
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| CDS-3UTR TCA 90 bp | GCAGAGCTTAAACTTAAATGCTTCTCTGAGTTCTGTTCATTTTCTCAAGAACGGAGTACTGTGCAAAGGTaGCCTTCCAGAGATCTGAAA | + |
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Preference number: 4 (lower is better) Translates to: AELKLKCFSEFCSFSQERSTVQR*PSRDLK Trigger: TTTCAGATCTCTGGAAGGTCACCTTTGCACAGTACT...CCGTTCTTGAGAAAATGAACAGAACTCAGAGAAGCATTTAAGTTTAAGCTCTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042702.7 ENSMUST00000161061.3 |
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| CDS-3UTR GCA 90 bp | GCAGAGCTTAAACTTAAATGCTTCTCTGAGTTCTGTTCATTTTCTCAAGAACGGACAACATTTTCAACCTaGTTCGAAGTTGCAGGCACG | + |
|
Preference number: 4 (lower is better) Translates to: AELKLKCFSEFCSFSQERTTFST*FEVAGT Trigger: CGTGCCTGCAACTTCGAAGCAGGTTGAAAATGTTGT...CCGTTCTTGAGAAAATGAACAGAACTCAGAGAAGCATTTAAGTTTAAGCTCTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042702.7 |
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| CDS CCA 90 bp | CACGGTGTCGATGCCCTCTCCAGTGGTGTGGTCTGGAGTCCAGCGTaGGAACGGGAACCGACAGGCAATGACTCGAGCTCCGTCCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: HGVDALSSGVVWSPA*EREPTGNDSSSVLQ Trigger: CTGGAGGACGGAGCTCGAGTCATTGCCTGTCGGTTCCCGTTCCCACGCTGGACTCCAGACCACACCACTGGAGAGGGCATCGACACCGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042702.7 ENSMUST00000161061.3 |
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| CDS GCA 90 bp | CCCGTCCTCTCTGAGCACTCATGTCATAGGCCCACACGGTGTCGATaGCCTCTCCAGTGGTGTGGTCTGGAGTCCAGCGTGGGAACGGGA | + |
|
Preference number: 5 (lower is better) Translates to: PVLSEHSCHRPTRCR*PLQWCGLESSVGTG Trigger: TCCCGTTCCCACGCTGGACTCCAGACCACACCACTGGAGAGGGCATCGACACCGTGTGGGCCTATGACATGAGTGCTCAGAGAGGACGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042702.7 ENSMUST00000161061.3 |
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| CDS CCA 90 bp | GAGCACTCATGTCATAGGCCCACACGGTGTCGATGCCCTCTCCAGTaGTGTGGTCTGGAGTCCAGCGTGGGAACGGGAACCGACAGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: EHSCHRPTRCRCPLQ*CGLESSVGTGTDRQ Trigger: TTGCCTGTCGGTTCCCGTTCCCACGCTGGACTCCAGACCACACCACTGGAGAGGGCATCGACACCGTGTGGGCCTATGACATGAGTGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042702.7 ENSMUST00000161061.3 |
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| CDS GCA 90 bp | CAGCCATGGATTCAATTCATACCCCACCGCTGGGAAGCCTTCCTTTaGAGCTGCAATCACAATCCGCCCATCGCCACTGCCGATGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: QPWIQFIPHRWEAFL*SCNHNPPIATADVH Trigger: GTGGACATCGGCAGTGGCGATGGGCGGATTGTGATTGCAGCTGCAAAGGAAGGCTTCCCAGCGGTGGGGTATGAATTGAATCCATGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042702.7 ENSMUST00000161061.3 |
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| CDS-3UTR CAA 90 bp | CAGACCCATGTCCAGTGTGTCACTGTCCTGGTGGCAGACACCAGGGCTCAGAGACTGGGAAGCCTTCCTTaGCAGCTGCAATCACAATCC | + |
|
Preference number: 5 (lower is better) Translates to: QTHVQCVTVLVADTRAQRLGSLP*QLQSQS Trigger: GGATTGTGATTGCAGCTGCAAAGGAAGGCTTCCCAG...TCTCTGAGCCCTGGTGTCTGCCACCAGGACAGTGACACACTGGACATGGGTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161061.3 |
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| CDS CCA 90 bp | AAAACTTGGCAGAGCCATGCACGCCTGCCCTCCAGGCACGATATCTaGAGTACCAAACCAGCCATGGATTCAATTCATACCCCACCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KTWQSHARLPSRHDI*STKPAMDSIHTPPL Trigger: CAGCGGTGGGGTATGAATTGAATCCATGGCTGGTTTGGTACTCCAGATATCGTGCCTGGAGGGCAGGCGTGCATGGCTCTGCCAAGTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042702.7 ENSMUST00000161061.3 |
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| CDS-3UTR CAA 90 bp | ACTGCAGGTGTTTGCCTAAGTGCCCTGCCCTCTTCACCCGAGCCATTAAACCATCCCAACTGGTCCTCTTaGAACTGTCGGATTCCAGAC | + |
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Preference number: 5 (lower is better) Translates to: TAGVCLSALPSSPEPLNHPNWSS*NCRIPD Trigger: GTCTGGAATCCGACAGTTCAAAGAGGACCAGTTGGG...ATGGTTTAATGGCTCGGGTGAAGAGGGCAGGGCACTTAGGCAAACACCTGCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042702.7 |
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| CDS GCA 90 bp | TCTGTGTCGCAGCATCCTGACAACATTTTCAACCTGCTTCGAAGTTaGAGGCACGAATGGCAAACAAACTTTCCGGAGGGCCGGGGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: SVSQHPDNIFNLLRS*RHEWQTNFPEGRGD Trigger: ATCACCCCGGCCCTCCGGAAAGTTTGTTTGCCATTCGTGCCTGCAACTTCGAAGCAGGTTGAAAATGTTGTCAGGATGCTGCGACACAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042702.7 |
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| CDS-3UTR CAA 90 bp | TACTGGGCAGGTAGAAGTGGAAGGATCAGAAGTTCCGGGTCATCGTGCTCAGTACTGGGAAGCCTTCCTTaGCAGCTGCAATCACAATCC | + |
|
Preference number: 5 (lower is better) Translates to: YWAGRSGRIRSSGSSCSVLGSLP*QLQSQS Trigger: GGATTGTGATTGCAGCTGCAAAGGAAGGCTTCCCAG...TACTGAGCACGATGACCCGGAACTTCTGATCCTTCCACTTCTACCTGCCCAGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042702.7 ENSMUST00000161061.3 |
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| CDS GCA 90 bp | AGGGGTCCTCTTCTGTGTCGCAGCATCCTGACAACATTTTCAACCTaGTTCGAAGTTGCAGGCACGAATGGCAAACAAACTTTCCGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RGPLLCRSILTTFST*FEVAGTNGKQTFRR Trigger: CCTCCGGAAAGTTTGTTTGCCATTCGTGCCTGCAACTTCGAAGCAGGTTGAAAATGTTGTCAGGATGCTGCGACACAGAAGAGGACCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042702.7 |
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| CDS TCA 90 bp | AATGACAACATTGGAGTACTGTGCAAAGGTGACCTTCCAGAGATCTaGAATATAAAACTTGGCAGAGCCATGCACGCCTGCCCTCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: NDNIGVLCKGDLPEI*NIKLGRAMHACPPG Trigger: GCCTGGAGGGCAGGCGTGCATGGCTCTGCCAAGTTTTATATTTCAGATCTCTGGAAGGTCACCTTTGCACAGTACTCCAATGTTGTCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042702.7 ENSMUST00000161061.3 |
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| CDS-3UTR CAA 90 bp | AGCTACACACTACAGAAATTCAGTCATGGACAAAACCACAGGAAACTGCAGGTGCCAAAAATGACAACATaGGAGTACTGTGCAAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SYTLQKFSHGQNHRKLQVPKMTT*EYCAKV Trigger: CACCTTTGCACAGTACTCCAATGTTGTCATTTTTGG...CACCTGCAGTTTCCTGTGGTTTTGTCCATGACTGAATTTCTGTAGTGTGTAGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042702.7 ENSMUST00000161061.3 |
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| CDS-3UTR CAA 90 bp | ATGTCTTCTCATCACAAACCAGCAGAGCCTCAACAGACATCACGTGTCATGAATCCAAAAATGACAACATaGGAGTACTGTGCAAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: MSSHHKPAEPQQTSRVMNPKMTT*EYCAKV Trigger: CACCTTTGCACAGTACTCCAATGTTGTCATTTTTGG...ATTCATGACACGTGATGTCTGTTGAGGCTCTGCTGGTTTGTGATGAGAAGACAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161061.3 |
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| CDS TCA 72 bp | CTGGAGTCCAGCGTGGGAACGGGAACCGACAGGCAATaGCTCGAGCTCCGTCCTCCAGCTCCAGCTCAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LESSVGTGTDRQ*LELRPPAPAQA Trigger: AGCTTGAGCTGGAGCTGGAGGACGGAGCTCGAGTCATTGCCTGTCGGTTCCCGTTCCCACGCTGGACTCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042702.7 ENSMUST00000161061.3 |
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| CDS CCA 72 bp | TGTCATAGGCCCACACGGTGTCGATGCCCTCTCCAGTaGTGTGGTCTGGAGTCCAGCGTGGGAACGGGAACC | + |
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Preference number: 6 (lower is better) Translates to: CHRPTRCRCPLQ*CGLESSVGTGT Trigger: GGTTCCCGTTCCCACGCTGGACTCCAGACCACACCACTGGAGAGGGCATCGACACCGTGTGGGCCTATGACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042702.7 ENSMUST00000161061.3 |
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| CDS GCA 72 bp | TCTGAGCACTCATGTCATAGGCCCACACGGTGTCGATaGCCTCTCCAGTGGTGTGGTCTGGAGTCCAGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: SEHSCHRPTRCR*PLQWCGLESSV Trigger: CACGCTGGACTCCAGACCACACCACTGGAGAGGGCATCGACACCGTGTGGGCCTATGACATGAGTGCTCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042702.7 ENSMUST00000161061.3 |
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| CDS TCA 72 bp | TCACTCAACGTCAAGGAGCTTGCTCCGTGTCTCAGATaGGGAGGCCTGCAGGCCTGCTGTCTCCGAGAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: SLNVKELAPCLR*GGLQACCLREV Trigger: AACCTCTCGGAGACAGCAGGCCTGCAGGCCTCCTCATCTGAGACACGGAGCAAGCTCCTTGACGTTGAGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042702.7 ENSMUST00000161061.3 |
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| CDS GCA 72 bp | ATTCAATTCATACCCCACCGCTGGGAAGCCTTCCTTTaGAGCTGCAATCACAATCCGCCCATCGCCACTGCC | + |
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Preference number: 6 (lower is better) Translates to: IQFIPHRWEAFL*SCNHNPPIATA Trigger: GGCAGTGGCGATGGGCGGATTGTGATTGCAGCTGCAAAGGAAGGCTTCCCAGCGGTGGGGTATGAATTGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042702.7 ENSMUST00000161061.3 |
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| CDS CAA 72 bp | GATTCAATTCATACCCCACCGCTGGGAAGCCTTCCTTaGCAGCTGCAATCACAATCCGCCCATCGCCACTGC | + |
|
Preference number: 6 (lower is better) Translates to: DSIHTPPLGSLP*QLQSQSAHRHC Trigger: GCAGTGGCGATGGGCGGATTGTGATTGCAGCTGCAAAGGAAGGCTTCCCAGCGGTGGGGTATGAATTGAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042702.7 ENSMUST00000161061.3 |
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| CDS CCA 72 bp | CAGAGCCATGCACGCCTGCCCTCCAGGCACGATATCTaGAGTACCAAACCAGCCATGGATTCAATTCATACC | + |
|
Preference number: 6 (lower is better) Translates to: QSHARLPSRHDI*STKPAMDSIHT Trigger: GGTATGAATTGAATCCATGGCTGGTTTGGTACTCCAGATATCGTGCCTGGAGGGCAGGCGTGCATGGCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042702.7 ENSMUST00000161061.3 |
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| CDS TCA 72 bp | TGTCCACCAGGGGTCCTCTTCTGTGTCGCAGCATCCTaGCAACATTTTCAACCTGCTTCGAAGTTGCAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: CPPGVLFCVAAS*QHFQPASKLQA Trigger: TGCCTGCAACTTCGAAGCAGGTTGAAAATGTTGTCAGGATGCTGCGACACAGAAGAGGACCCCTGGTGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042702.7 |
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| CDS GCA 72 bp | CAGCATCCTGACAACATTTTCAACCTGCTTCGAAGTTaGAGGCACGAATGGCAAACAAACTTTCCGGAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: QHPDNIFNLLRS*RHEWQTNFPEG Trigger: GCCCTCCGGAAAGTTTGTTTGCCATTCGTGCCTGCAACTTCGAAGCAGGTTGAAAATGTTGTCAGGATGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042702.7 |
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| CDS CCA 72 bp | AACATTTTCAACCTGCTTCGAAGTTGCAGGCACGAATaGCAAACAAACTTTCCGGAGGGCCGGGGTGATGAA | + |
|
Preference number: 6 (lower is better) Translates to: NIFNLLRSCRHE*QTNFPEGRGDE Trigger: TTCATCACCCCGGCCCTCCGGAAAGTTTGTTTGCCATTCGTGCCTGCAACTTCGAAGCAGGTTGAAAATGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042702.7 |
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| CDS TCA 72 bp | ATTGGAGTACTGTGCAAAGGTGACCTTCCAGAGATCTaGAATATAAAACTTGGCAGAGCCATGCACGCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: IGVLCKGDLPEI*NIKLGRAMHAC Trigger: GCAGGCGTGCATGGCTCTGCCAAGTTTTATATTTCAGATCTCTGGAAGGTCACCTTTGCACAGTACTCCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042702.7 ENSMUST00000161061.3 |
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| CDS CAA 72 bp | TGTGGCATCATCTGGGGCACACCAAAAATGACAACATaGGAGTACTGTGCAAAGGTGACCTTCCAGAGATCT | + |
|
Preference number: 6 (lower is better) Translates to: CGIIWGTPKMTT*EYCAKVTFQRS Trigger: AGATCTCTGGAAGGTCACCTTTGCACAGTACTCCAATGTTGTCATTTTTGGTGTGCCCCAGATGATGCCACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042702.7 ENSMUST00000161061.3 |
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