RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATP9B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000024566

Ensembl transcript IDs: ENSMUST00000091790.5, ENSMUST00000223926.2, ENSMUST00000224709.2, ENSMUST00000225205.2, ENSMUST00000225235.2, ENSMUST00000225980.2, ENSMUST00000226064.2

Found 386 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCCTCAGCCCGCCAGCAGTGCCAGTCCCTCATGCTGCCCAGCGCATaGGTCTCTACCTGGCCTCATGCCCCACTCAGGAGGACAGCTTGG +
Preference number: 1 (lower is better)
Translates to: PSARQQCQSLMLPSA*VSTWPHAPLRRTAW
Trigger: CCAAGCTGTCCTCCTGAGTGGGGCATGAGGCCAGGTAGAGACTCATGCGCTGGGCAGCATGAGGGACTGGCACTGCTGGCGGGCTGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225235.2
3UTR GCA 90 bp GCTCAGGTCAAAGGCATCTGGGATGGATGGCTGAGCAGCTTTATTTaGTCACAGGGAGGAGCGGGTGGAGGGCCTGCACACACTCACGGC +
Preference number: 1 (lower is better)
Translates to: AQVKGIWDGWLSSFI*SQGGAGGGPAHTHG
Trigger: GCCGTGAGTGTGTGCAGGCCCTCCACCCGCTCCTCCCTGTGAGCAAATAAAGCTGCTCAGCCATCCATCCCAGATGCCTTTGACCTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
3UTR CCA 90 bp GCATTGCGCAGCATCTCTAGTGTGGGCCTCACATCAGCTTGCAGCTaGTCCTCCACCCCAGTGAGGCACAACAGCTCCATCTCTCTCTCC +
Preference number: 1 (lower is better)
Translates to: ALRSISSVGLTSACS*SSTPVRHNSSISLS
Trigger: GGAGAGAGAGATGGAGCTGTTGTGCCTCACTGGGGTGGAGGACCAGCTGCAAGCTGATGTGAGGCCCACACTAGAGATGCTGCGCAATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225235.2
3UTR GCA 90 bp GCTGGAGGCCTGGTAGGTGCGGTTCTCATCACTAAAGTCTTGGTCTaGTTCAGCAAACTCAGTCTCCCCAGTGATGCCAGCCCGAGCCTC +
Preference number: 1 (lower is better)
Translates to: AGGLVGAVLITKVLV*FSKLSLPSDASPSL
Trigger: GAGGCTCGGGCTGGCATCACTGGGGAGACTGAGTTTGCTGAAGCAGACCAAGACTTTAGTGATGAGAACCGCACCTACCAGGCCTCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000225205.2
ENSMUST00000225235.2
3UTR GCA 90 bp CCTCCTTTCCTTCAATCCCAATCCCACAGTCAGCAGCCTGGATCATaGTCACGTCATTCCCTCCGTCGCCGATGGCACAGGTGCGCTTTC +
Preference number: 1 (lower is better)
Translates to: PPFLQSQSHSQQPGS*SRHSLRRRWHRCAF
Trigger: GAAAGCGCACCTGTGCCATCGGCGACGGAGGGAATGACGTGAGCATGATCCAGGCTGCTGACTGTGGGATTGGGATTGAAGGAAAGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225235.2
3UTR CCA 90 bp TCAGGAATGGCTTTCTGCAGTTCACCACCGCAGAAATTACACTTCTaGCGCTCAGGAGCGAAGCCTGCCCAGCTGTGCCGAGGCTGTCAC +
Preference number: 1 (lower is better)
Translates to: SGMAFCSSPPQKLHF*RSGAKPAQLCRGCH
Trigger: GTGACAGCCTCGGCACAGCTGGGCAGGCTTCGCTCCTGAGCGCCAGAAGTGTAATTTCTGCGGTGGTGAACTGCAGAAAGCCATTCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
3UTR CCA 90 bp CTCTCACAGCGTGCGCTTCCTTCCCCAAGGAAGTCAGGGTCTCAGTaGCCACGTCTGAGGGGAGGTCAAGCTGAAGAGCACAGGCATATA +
Preference number: 1 (lower is better)
Translates to: LSQRALPSPRKSGSQ*PRLRGGQAEEHRHI
Trigger: TATATGCCTGTGCTCTTCAGCTTGACCTCCCCTCAGACGTGGCCACTGAGACCCTGACTTCCTTGGGGAAGGAAGCGCACGCTGTGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
3UTR TCA 90 bp TGTGCCAGGTGTATGACCAGGGCTTCCTCCCATCCTTGTCTCGTGTaGCCCAACAGCGGCATCCTGAGGGGCAGATGCTGTTCACTTCAA +
Preference number: 1 (lower is better)
Translates to: CARCMTRASSHPCLV*PNSGILRGRCCSLQ
Trigger: TTGAAGTGAACAGCATCTGCCCCTCAGGATGCCGCTGTTGGGTCACACGAGACAAGGATGGGAGGAAGCCCTGGTCATACACCTGGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
3UTR GCA 90 bp CAGAAATTACACTTCTGGCGCTCAGGAGCGAAGCCTGCCCAGCTGTaGCGAGGCTGTCACTTCCTCTCAGTAGCTGTTCACGCAGTGCAA +
Preference number: 1 (lower is better)
Translates to: QKLHFWRSGAKPAQL*RGCHFLSVAVHAVQ
Trigger: TTGCACTGCGTGAACAGCTACTGAGAGGAAGTGACAGCCTCGGCACAGCTGGGCAGGCTTCGCTCCTGAGCGCCAGAAGTGTAATTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
3UTR GCA 90 bp ACCCACTGTCTCCTGAGGTGCAATGGCATGTGCAGGCATGGCCCCTaGAGTCTGATCAGGAATGGCTTTCTGCAGTTCACCACCGCAGAA +
Preference number: 1 (lower is better)
Translates to: THCLLRCNGMCRHGP*SLIRNGFLQFTTAE
Trigger: TTCTGCGGTGGTGAACTGCAGAAAGCCATTCCTGATCAGACTGCAGGGGCCATGCCTGCACATGCCATTGCACCTCAGGAGACAGTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
3UTR CCA 90 bp ACGAGTTACCCACTGTCTCCTGAGGTGCAATGGCATGTGCAGGCATaGCCCCTGCAGTCTGATCAGGAATGGCTTTCTGCAGTTCACCAC +
Preference number: 1 (lower is better)
Translates to: TSYPLSPEVQWHVQA*PLQSDQEWLSAVHH
Trigger: GTGGTGAACTGCAGAAAGCCATTCCTGATCAGACTGCAGGGGCCATGCCTGCACATGCCATTGCACCTCAGGAGACAGTGGGTAACTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
3UTR CCA 90 bp CTGCATCTGAAGAGGACGAGTTACCCACTGTCTCCTGAGGTGCAATaGCATGTGCAGGCATGGCCCCTGCAGTCTGATCAGGAATGGCTT +
Preference number: 1 (lower is better)
Translates to: LHLKRTSYPLSPEVQ*HVQAWPLQSDQEWL
Trigger: AAGCCATTCCTGATCAGACTGCAGGGGCCATGCCTGCACATGCCATTGCACCTCAGGAGACAGTGGGTAACTCGTCCTCTTCAGATGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
3UTR TCA 90 bp CAGTGTCACCGCTTGGCCACCTGGGCTTGTGTGTGTGGTGTCCGCTaGAAAGCAAAACTGCATCTGAAGAGGACGAGTTACCCACTGTCT +
Preference number: 1 (lower is better)
Translates to: QCHRLATWACVCGVR*KAKLHLKRTSYPLS
Trigger: AGACAGTGGGTAACTCGTCCTCTTCAGATGCAGTTTTGCTTTTCAGCGGACACCACACACACAAGCCCAGGTGGCCAAGCGGTGACACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
3UTR CCA 90 bp GTCTACACCCTGACCCTGGCACTGTGGCCTTGGCTCATAGCCTTCTaGCACTTTCTTAATTCACGCTGTATCAATGAGGGCATGGGGGCA +
Preference number: 1 (lower is better)
Translates to: VYTLTLALWPWLIAF*HFLNSRCINEGMGA
Trigger: TGCCCCCATGCCCTCATTGATACAGCGTGAATTAAGAAAGTGCCAGAAGGCTATGAGCCAAGGCCACAGTGCCAGGGTCAGGGTGTAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
3UTR TCA 90 bp CCTGGGCTTGTGTGTGTGGTGTCCGCTGAAAAGCAAAACTGCATCTaGAGAGGACGAGTTACCCACTGTCTCCTGAGGTGCAATGGCATG +
Preference number: 1 (lower is better)
Translates to: PGLVCVVSAEKQNCI*RGRVTHCLLRCNGM
Trigger: CATGCCATTGCACCTCAGGAGACAGTGGGTAACTCGTCCTCTTCAGATGCAGTTTTGCTTTTCAGCGGACACCACACACACAAGCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
3UTR CCA 90 bp TGCTCACAGGTTGCTAAGAACAAAGGCGCTCAGGTCAAAGGCATCTaGGATGGATGGCTGAGCAGCTTTATTTGCTCACAGGGAGGAGCG +
Preference number: 1 (lower is better)
Translates to: CSQVAKNKGAQVKGI*DGWLSSFICSQGGA
Trigger: CGCTCCTCCCTGTGAGCAAATAAAGCTGCTCAGCCATCCATCCCAGATGCCTTTGACCTGAGCGCCTTTGTTCTTAGCAACCTGTGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
3UTR CCA 90 bp GACTTCTCAAGCCTGACTCCTCCTGCTGTTCCATATTCACCACTGTaGGAAGGTCTGCTCTGCATCAAAGCAGCTGAACCGCAGAGGTTC +
Preference number: 1 (lower is better)
Translates to: DFSSLTPPAVPYSPL*EGLLCIKAAEPQRF
Trigger: GAACCTCTGCGGTTCAGCTGCTTTGATGCAGAGCAGACCTTCCCACAGTGGTGAATATGGAACAGCAGGAGGAGTCAGGCTTGAGAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
3UTR CCA 90 bp TGGATTCTACTGCTGACGCTCTTCTTGACTTTAGGCGTTGAGGACTaGCTTCTTCTCAGTGGAGCAGAGCTTGGGTTGTGCCCACTTGGC +
Preference number: 1 (lower is better)
Translates to: WILLLTLFLTLGVED*LLLSGAELGLCPLG
Trigger: GCCAAGTGGGCACAACCCAAGCTCTGCTCCACTGAGAAGAAGCCAGTCCTCAACGCCTAAAGTCAAGAAGAGCGTCAGCAGTAGAATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000225205.2
ENSMUST00000225235.2
3UTR CCA 90 bp ATCGGCTCTCAAAATCCTGGTATTGCTCTTCTGTCAGAGTCCTCTTaGCTACCACAAGGGTTCGCAGGCCCTCTCGTGCCATGTTTCCAC +
Preference number: 1 (lower is better)
Translates to: IGSQNPGIALLSESS*LPQGFAGPLVPCFH
Trigger: GTGGAAACATGGCACGAGAGGGCCTGCGAACCCTTGTGGTAGCCAAGAGGACTCTGACAGAAGAGCAATACCAGGATTTTGAGAGCCGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225235.2
3UTR TCA 90 bp TGCTTCATGGATTCTACTGCTGACGCTCTTCTTGACTTTAGGCGTTaGGGACTGGCTTCTTCTCAGTGGAGCAGAGCTTGGGTTGTGCCC +
Preference number: 1 (lower is better)
Translates to: CFMDSTADALLDFRR*GLASSQWSRAWVVP
Trigger: GGGCACAACCCAAGCTCTGCTCCACTGAGAAGAAGCCAGTCCTCAACGCCTAAAGTCAAGAAGAGCGTCAGCAGTAGAATCCATGAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000225205.2
ENSMUST00000225235.2
3UTR CCA 90 bp TATAAGCACACGGACGAGGACTCCTACTCAGGGAGCAAAGCATTGTaGTTGGTGCTGTGGCAGCACAGGACAGCTGAGTTCTACGTAAAC +
Preference number: 1 (lower is better)
Translates to: YKHTDEDSYSGSKAL*LVLWQHRTAEFYVN
Trigger: GTTTACGTAGAACTCAGCTGTCCTGTGCTGCCACAGCACCAACCACAATGCTTTGCTCCCTGAGTAGGAGTCCTCGTCCGTGTGCTTATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
3UTR CCA 90 bp GACGAGGACTCCTACTCAGGGAGCAAAGCATTGTGGTTGGTGCTGTaGCAGCACAGGACAGCTGAGTTCTACGTAAACAGTTCTGAGTAT +
Preference number: 1 (lower is better)
Translates to: DEDSYSGSKALWLVL*QHRTAEFYVNSSEY
Trigger: ATACTCAGAACTGTTTACGTAGAACTCAGCTGTCCTGTGCTGCCACAGCACCAACCACAATGCTTTGCTCCCTGAGTAGGAGTCCTCGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
3UTR CCA 90 bp AGTGACCAGCACTCAGTCTACACCCTGACCCTGGCACTGTGGCCTTaGCTCATAGCCTTCTGGCACTTTCTTAATTCACGCTGTATCAAT +
Preference number: 1 (lower is better)
Translates to: SDQHSVYTLTLALWP*LIAFWHFLNSRCIN
Trigger: ATTGATACAGCGTGAATTAAGAAAGTGCCAGAAGGCTATGAGCCAAGGCCACAGTGCCAGGGTCAGGGTGTAGACTGAGTGCTGGTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
3UTR CCA 90 bp CTTGAAGGAAAGGGATCTTCCCTTGGTGAGGTCCTTGTACAGCTCTaGGTAGAGAATCGCCATCTCTGGCTTTACATCTTGGTCCAACAC +
Preference number: 1 (lower is better)
Translates to: LEGKGSSLGEVLVQL*VENRHLWLYILVQH
Trigger: GTGTTGGACCAAGATGTAAAGCCAGAGATGGCGATTCTCTACCCAGAGCTGTACAAGGACCTCACCAAGGGAAGATCCCTTTCCTTCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225235.2
3UTR TCA 90 bp ACAGCAGCGACTTTCAGAGCCCGGTCATGGATACTCAGTTTGGCTTaGCTGTATCGGCTCTCAAAATCCTGGTATTGCTCTTCTGTCAGA +
Preference number: 1 (lower is better)
Translates to: TAATFRARSWILSLA*LYRLSKSWYCSSVR
Trigger: TCTGACAGAAGAGCAATACCAGGATTTTGAGAGCCGATACAGTCAAGCCAAACTGAGTATCCATGACCGGGCTCTGAAAGTCGCTGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225235.2
3UTR GCA 90 bp AGACAGTGCTCCAGAGAATCCCCAGATATAACCAGTGCACAGTCATaGTTCCTTCTAAACGCATTTAGCTCCAAATGGGCTTCTCCCCGA +
Preference number: 1 (lower is better)
Translates to: RQCSRESPDITSAQS*FLLNAFSSKWASPR
Trigger: TCGGGGAGAAGCCCATTTGGAGCTAAATGCGTTTAGAAGGAAGCATGACTGTGCACTGGTTATATCTGGGGATTCTCTGGAGCACTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000225235.2
3UTR CCA 90 bp CAGCAAACAGTGACACCGTGTGGAGAATGGGAGAAACAGCTTTTCTaGTTGCAGTTTCGTCTGTCAGGGGAATATGCTCACAGGTTGCTA +
Preference number: 1 (lower is better)
Translates to: QQTVTPCGEWEKQLF*LQFRLSGEYAHRLL
Trigger: TAGCAACCTGTGAGCATATTCCCCTGACAGACGAAACTGCAACCAGAAAAGCTGTTTCTCCCATTCTCCACACGGTGTCACTGTTTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
3UTR CCA 90 bp CTACAACAGCAGCGACTTTCAGAGCCCGGTCATGGATACTCAGTTTaGCTTGACTGTATCGGCTCTCAAAATCCTGGTATTGCTCTTCTG +
Preference number: 1 (lower is better)
Translates to: LQQQRLSEPGHGYSV*LDCIGSQNPGIALL
Trigger: CAGAAGAGCAATACCAGGATTTTGAGAGCCGATACAGTCAAGCCAAACTGAGTATCCATGACCGGGCTCTGAAAGTCGCTGCTGTTGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225235.2
3UTR GCA 90 bp CTCATACACAGGAGTGACATTATGACAAAGGGCAATGGCTTTCACTaGTTCATGGATTCTACTGCTGACGCTCTTCTTGACTTTAGGCGT +
Preference number: 1 (lower is better)
Translates to: LIHRSDIMTKGNGFH*FMDSTADALLDFRR
Trigger: ACGCCTAAAGTCAAGAAGAGCGTCAGCAGTAGAATCCATGAAGCAGTGAAAGCCATTGCCCTTTGTCATAATGTCACTCCTGTGTATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000225205.2
ENSMUST00000225235.2
3UTR CCA 90 bp AGGAGAAGAGAGCTGGTCCCAGTCCTAGCCACCTCAGTCTCACTCTaGAACCCAATTACTAATCAATACACAACTCTAACAGTGACTATT +
Preference number: 1 (lower is better)
Translates to: RRRELVPVLATSVSL*NPITNQYTTLTVTI
Trigger: AATAGTCACTGTTAGAGTTGTGTATTGATTAGTAATTGGGTTCCAGAGTGAGACTGAGGTGGCTAGGACTGGGACCAGCTCTCTTCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225205.2
3UTR TCA 90 bp GTATGGTTTTACAGATATAAAATGCATCAGCTAACAGCAGTGCCTTaGGGAATGGTTTACATTCATAGCTGCAACGGAATTAGGACAGCA +
Preference number: 1 (lower is better)
Translates to: VWFYRYKMHQLTAVP*GMVYIHSCNGIRTA
Trigger: TGCTGTCCTAATTCCGTTGCAGCTATGAATGTAAACCATTCCTCAAGGCACTGCTGTTAGCTGATGCATTTTATATCTGTAAAACCATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
3UTR GCA 90 bp TGTACCAGGAATATTCTCATCTTTCATAATCATCCATCCATATGCTaGTTTGCCCATATCCAAGTTTACTCGCAGACTTATGGGAATGAT +
Preference number: 1 (lower is better)
Translates to: CTRNILIFHNHPSIC*FAHIQVYSQTYGND
Trigger: ATCATTCCCATAAGTCTGCGAGTAAACTTGGATATGGGCAAAGCAGCATATGGATGGATGATTATGAAAGATGAGAATATTCCTGGTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000225205.2
ENSMUST00000225235.2
3UTR GCA 90 bp AACTGTACCAGGAATATTCTCATCTTTCATAATCATCCATCCATATaGTGCTTTGCCCATATCCAAGTTTACTCGCAGACTTATGGGAAT +
Preference number: 1 (lower is better)
Translates to: NCTRNILIFHNHPSI*CFAHIQVYSQTYGN
Trigger: ATTCCCATAAGTCTGCGAGTAAACTTGGATATGGGCAAAGCAGCATATGGATGGATGATTATGAAAGATGAGAATATTCCTGGTACAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000225205.2
ENSMUST00000225235.2
3UTR CCA 90 bp GTCTTCAGGGAGTTTAATTTATTCATGTCTCTGATTAAATCAAACTaGCCTGAAGGAGATATTGATTCATATTGCCAAGACCATCGTGAA +
Preference number: 1 (lower is better)
Translates to: VFREFNLFMSLIKSN*PEGDIDSYCQDHRE
Trigger: TTCACGATGGTCTTGGCAATATGAATCAATATCTCCTTCAGGCCAGTTTGATTTAATCAGAGACATGAATAAATTAAACTCCCTGAAGAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225205.2
3UTR TCA 90 bp TGGCATTTTACTAGGTCTTCAGGGAGTTTAATTTATTCATGTCTCTaGTTAAATCAAACTGGCCTGAAGGAGATATTGATTCATATTGCC +
Preference number: 1 (lower is better)
Translates to: WHFTRSSGSLIYSCL*LNQTGLKEILIHIA
Trigger: GGCAATATGAATCAATATCTCCTTCAGGCCAGTTTGATTTAATCAGAGACATGAATAAATTAAACTCCCTGAAGACCTAGTAAAATGCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225205.2
3UTR-3UTR GCA 90 bp CACGGACGAGGACTCCTACTCAGGGAGCAAAGCATTGTGGTTGGTGCTGTGGCACTCAGGAGCGAAGCCTaGCCAGCTGTGCCGAGGCTG +
Preference number: 2 (lower is better)
Translates to: HGRGLLLREQSIVVGAVALRSEA*PAVPRL
Trigger: CAGCCTCGGCACAGCTGGGCAGGCTTCGCTCCTGAG...TGCCACAGCACCAACCACAATGCTTTGCTCCCTGAGTAGGAGTCCTCGTCCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
3UTR-3UTR GCA 90 bp TTCTGCAGTTCACCACCGCAGAAATTACACTTCTGGCGCTCAGGAGCGAAGCCTTCAGCCCGCCAGCAGTaGCAGTCCCTCATGCTGCCC +
Preference number: 2 (lower is better)
Translates to: FCSSPPQKLHFWRSGAKPSARQQ*QSLMLP
Trigger: GGGCAGCATGAGGGACTGGCACTGCTGGCGGGCTGA...AGGCTTCGCTCCTGAGCGCCAGAAGTGTAATTTCTGCGGTGGTGAACTGCAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
3UTR-3UTR TCA 90 bp TGTGACAGGAACACGCTGTACAGTGCAGAGCTGCACGCACAACTCCTGGGGCTAATGCTGCCCAGCGCATaGGTCTCTACCTGGCCTCAT +
Preference number: 2 (lower is better)
Translates to: CDRNTLYSAELHAQLLGLMLPSA*VSTWPH
Trigger: ATGAGGCCAGGTAGAGACTCATGCGCTGGGCAGCAT...TAGCCCCAGGAGTTGTGCGTGCAGCTCTGCACTGTACAGCGTGTTCCTGTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
3UTR-3UTR GCA 90 bp GGGCTCCCTCTTAGAGCAGGGAGGAAACCAGCCCGTGAACTGTCAGCAAACAGTGTTCACGCAGTGCAATaGTGGGTGAGCTCGCCCTCA +
Preference number: 2 (lower is better)
Translates to: GLPLRAGRKPARELSANSVHAVQ*WVSSPS
Trigger: TGAGGGCGAGCTCACCCAGCATTGCACTGCGTGAAC...ACTGTTTGCTGACAGTTCACGGGCTGGTTTCCTCCCTGCTCTAAGAGGGAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
3UTR-3UTR GCA 90 bp TCTCCTGAGGTGCAATGGCATGTGCAGGCATGGCCCCTGCAGTCTGATCAGGAAGTTCACGCAGTGCAATaGTGGGTGAGCTCGCCCTCA +
Preference number: 2 (lower is better)
Translates to: SPEVQWHVQAWPLQSDQEVHAVQ*WVSSPS
Trigger: TGAGGGCGAGCTCACCCAGCATTGCACTGCGTGAAC...TTCCTGATCAGACTGCAGGGGCCATGCCTGCACATGCCATTGCACCTCAGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
3UTR-3UTR CCA 90 bp TGTGACAGGAACACGCTGTACAGTGCAGAGCTGCACGCACAACTCCTGGGGCTAAGCAGTGTCACCGCTTaGCCACCTGGGCTTGTGTGT +
Preference number: 2 (lower is better)
Translates to: CDRNTLYSAELHAQLLGLSSVTA*PPGLVC
Trigger: ACACACAAGCCCAGGTGGCCAAGCGGTGACACTGCT...TAGCCCCAGGAGTTGTGCGTGCAGCTCTGCACTGTACAGCGTGTTCCTGTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
3UTR-3UTR GCA 90 bp AAACTGCATCTGAAGAGGACGAGTTACCCACTGTCTCCTGAGGTGCAATGGCATTCAGCCCGCCAGCAGTaGCAGTCCCTCATGCTGCCC +
Preference number: 2 (lower is better)
Translates to: KLHLKRTSYPLSPEVQWHSARQQ*QSLMLP
Trigger: GGGCAGCATGAGGGACTGGCACTGCTGGCGGGCTGA...ATGCCATTGCACCTCAGGAGACAGTGGGTAACTCGTCCTCTTCAGATGCAGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
3UTR-3UTR CCA 90 bp TTCATAGCTGCAACGGAATTAGGACAGCAGTGTCACCGCTTGGCCACCTGGGCTTCTCCTGAGGTGCAATaGCATGTGCAGGCATGGCCC +
Preference number: 2 (lower is better)
Translates to: FIAATELGQQCHRLATWASPEVQ*HVQAWP
Trigger: GGGCCATGCCTGCACATGCCATTGCACCTCAGGAGA...AGCCCAGGTGGCCAAGCGGTGACACTGCTGTCCTAATTCCGTTGCAGCTATGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
3UTR-3UTR CCA 90 bp CACTCAGTCTACACCCTGACCCTGGCACTGTGGCCTTGGCTCATAGCCTTCTGGGTATCAATGAGGGCATaGGGGCATCTCGAAGTCAGG +
Preference number: 2 (lower is better)
Translates to: HSVYTLTLALWPWLIAFWVSMRA*GHLEVR
Trigger: CCTGACTTCGAGATGCCCCCATGCCCTCATTGATAC...CCAGAAGGCTATGAGCCAAGGCCACAGTGCCAGGGTCAGGGTGTAGACTGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
3UTR-3UTR TCA 90 bp TGCAGAGCTGCACGCACAACTCCTGGGGCTAACTCTAAGGCCAGAATTCCTCTAATGCTGCCCAGCGCATaGGTCTCTACCTGGCCTCAT +
Preference number: 2 (lower is better)
Translates to: CRAARTTPGANSKARIPLMLPSA*VSTWPH
Trigger: ATGAGGCCAGGTAGAGACTCATGCGCTGGGCAGCAT...TAGAGGAATTCTGGCCTTAGAGTTAGCCCCAGGAGTTGTGCGTGCAGCTCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
3UTR-3UTR CCA 90 bp CAGGTCAAAGGCATCTGGGATGGATGGCTGAGCAGCTTTATTTGCTCACAGGGACACCGCTTGGCCACCTaGGCTTGTGTGTGTGGTGTC +
Preference number: 2 (lower is better)
Translates to: QVKGIWDGWLSSFICSQGHRLAT*ACVCGV
Trigger: GACACCACACACACAAGCCCAGGTGGCCAAGCGGTG...TCCCTGTGAGCAAATAAAGCTGCTCAGCCATCCATCCCAGATGCCTTTGACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
3UTR CAA 90 bp GGGTATAAGCACACGGACGAGGACTCCTACTCAGGGAGCAAAGCATaGTGGTTGGTGCTGTGGCAGCACAGGACAGCTGAGTTCTACGTA +
Preference number: 2 (lower is better)
Translates to: GYKHTDEDSYSGSKA*WLVLWQHRTAEFYV
Trigger: TACGTAGAACTCAGCTGTCCTGTGCTGCCACAGCACCAACCACAATGCTTTGCTCCCTGAGTAGGAGTCCTCGTCCGTGTGCTTATACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
3UTR-3UTR TCA 90 bp GGGGCTAACTCTAAGGCCAGAATTCCTCTAAAGAGCTCCCATGAGCCCTCAGTGATGGCCCCTGCAGTCTaGTCAGGAATGGCTTTCTGC +
Preference number: 2 (lower is better)
Translates to: GANSKARIPLKSSHEPSVMAPAV*SGMAFC
Trigger: GCAGAAAGCCATTCCTGATCAGACTGCAGGGGCCAT...CACTGAGGGCTCATGGGAGCTCTTTAGAGGAATTCTGGCCTTAGAGTTAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
3UTR-3UTR TCA 90 bp TTCTGCAGTTCACCACCGCAGAAATTACACTTCTGGCGCTCAGGAGCGAAGCCTTCTAAAGAGCTCCCATaGGCCCTCAGTGCAGCCTTC +
Preference number: 2 (lower is better)
Translates to: FCSSPPQKLHFWRSGAKPSKELP*ALSAAF
Trigger: GAAGGCTGCACTGAGGGCTCATGGGAGCTCTTTAGA...AGGCTTCGCTCCTGAGCGCCAGAAGTGTAATTTCTGCGGTGGTGAACTGCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
3UTR-3UTR TCA 90 bp GGCAGACCTGGGAGACAGTGCTCCAGAGAATCCCCAGATATAACCAGTGCACAGAAGAGGTCCACTGTGTaGCAGGAACACGCTGTACAG +
Preference number: 2 (lower is better)
Translates to: GRPGRQCSRESPDITSAQKRSTV*QEHAVQ
Trigger: CTGTACAGCGTGTTCCTGTCACACAGTGGACCTCTT...CTGTGCACTGGTTATATCTGGGGATTCTCTGGAGCACTGTCTCCCAGGTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225235.2
3UTR-3UTR GCA 90 bp CACTCAGTCTACACCCTGACCCTGGCACTGTGGCCTTGGCTCATAGCCTTCTGGTCAGGAATGGCTTTCTaGAGTTCACCACCGCAGAAA +
Preference number: 2 (lower is better)
Translates to: HSVYTLTLALWPWLIAFWSGMAF*SSPPQK
Trigger: TTTCTGCGGTGGTGAACTGCAGAAAGCCATTCCTGA...CCAGAAGGCTATGAGCCAAGGCCACAGTGCCAGGGTCAGGGTGTAGACTGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
3UTR-3UTR CCA 90 bp TATAAGCACACGGACGAGGACTCCTACTCAGGGAGCAAAGCATTGTGGTTGGTGTCTCCTGAGGTGCAATaGCATGTGCAGGCATGGCCC +
Preference number: 2 (lower is better)
Translates to: YKHTDEDSYSGSKALWLVSPEVQ*HVQAWP
Trigger: GGGCCATGCCTGCACATGCCATTGCACCTCAGGAGA...CACCAACCACAATGCTTTGCTCCCTGAGTAGGAGTCCTCGTCCGTGTGCTTATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
3UTR CAA 90 bp AAGCACACGGACGAGGACTCCTACTCAGGGAGCAAAGCATTGTGGTaGGTGCTGTGGCAGCACAGGACAGCTGAGTTCTACGTAAACAGT +
Preference number: 2 (lower is better)
Translates to: KHTDEDSYSGSKALW*VLWQHRTAEFYVNS
Trigger: ACTGTTTACGTAGAACTCAGCTGTCCTGTGCTGCCACAGCACCAACCACAATGCTTTGCTCCCTGAGTAGGAGTCCTCGTCCGTGTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
3UTR-3UTR TCA 90 bp GGGGCTAACTCTAAGGCCAGAATTCCTCTAAAGAGCTCCCATGAGCCCTCAGTGGAGGGGAGGTCAAGCTaGAGAGCACAGGCATATACA +
Preference number: 2 (lower is better)
Translates to: GANSKARIPLKSSHEPSVEGRSS*RAQAYT
Trigger: TGTATATGCCTGTGCTCTTCAGCTTGACCTCCCCTC...CACTGAGGGCTCATGGGAGCTCTTTAGAGGAATTCTGGCCTTAGAGTTAGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
3UTR-3UTR TCA 90 bp GGGGCTAACTCTAAGGCCAGAATTCCTCTAAAGAGCTCCCATGAGCCCTCAGTGTCGACTTCTCAAGCCTaGCTCCTCCTGCTGTTCCAT +
Preference number: 2 (lower is better)
Translates to: GANSKARIPLKSSHEPSVSTSQA*LLLLFH
Trigger: ATGGAACAGCAGGAGGAGTCAGGCTTGAGAAGTCGA...CACTGAGGGCTCATGGGAGCTCTTTAGAGGAATTCTGGCCTTAGAGTTAGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
3UTR-3UTR TCA 90 bp TTCTGCAGTTCACCACCGCAGAAATTACACTTCTGGCGCTCAGGAGCGAAGCCTTTTCTTCAGTCCTCCTaGGTCACTGTGTGCCAGGTG +
Preference number: 2 (lower is better)
Translates to: FCSSPPQKLHFWRSGAKPFLQSS*VTVCQV
Trigger: CACCTGGCACACAGTGACTCAGGAGGACTGAAGAAA...AGGCTTCGCTCCTGAGCGCCAGAAGTGTAATTTCTGCGGTGGTGAACTGCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
3UTR-3UTR GCA 90 bp GAGGACTCCTACTCAGGGAGCAAAGCATTGTGGTTGGTGCTGTGGCAGCACAGGTCAGGAATGGCTTTCTaGAGTTCACCACCGCAGAAA +
Preference number: 2 (lower is better)
Translates to: EDSYSGSKALWLVLWQHRSGMAF*SSPPQK
Trigger: TTTCTGCGGTGGTGAACTGCAGAAAGCCATTCCTGA...CCTGTGCTGCCACAGCACCAACCACAATGCTTTGCTCCCTGAGTAGGAGTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
3UTR-3UTR CCA 90 bp TGCAGAGCTGCACGCACAACTCCTGGGGCTAACTCTAAGGCCAGAATTCCTCTAGCAAAGCATTGTGGTTaGTGCTGTGGCAGCACAGGA +
Preference number: 2 (lower is better)
Translates to: CRAARTTPGANSKARIPLAKHCG*CCGSTG
Trigger: TCCTGTGCTGCCACAGCACCAACCACAATGCTTTGC...TAGAGGAATTCTGGCCTTAGAGTTAGCCCCAGGAGTTGTGCGTGCAGCTCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
3UTR-3UTR CCA 90 bp TTCTGCAGTTCACCACCGCAGAAATTACACTTCTGGCGCTCAGGAGCGAAGCCTGCAAAGCATTGTGGTTaGTGCTGTGGCAGCACAGGA +
Preference number: 2 (lower is better)
Translates to: FCSSPPQKLHFWRSGAKPAKHCG*CCGSTG
Trigger: TCCTGTGCTGCCACAGCACCAACCACAATGCTTTGC...AGGCTTCGCTCCTGAGCGCCAGAAGTGTAATTTCTGCGGTGGTGAACTGCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
3UTR-3UTR CCA 90 bp CAGTCTGATCAGGAATGGCTTTCTGCAGTTCACCACCGCAGAAATTACACTTCTACAGGGAGGAGCGGGTaGAGGGCCTGCACACACTCA +
Preference number: 2 (lower is better)
Translates to: QSDQEWLSAVHHRRNYTSTGRSG*RACTHS
Trigger: TGAGTGTGTGCAGGCCCTCCACCCGCTCCTCCCTGT...AGAAGTGTAATTTCTGCGGTGGTGAACTGCAGAAAGCCATTCCTGATCAGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
3UTR-3UTR CCA 90 bp TGTGACAGGAACACGCTGTACAGTGCAGAGCTGCACGCACAACTCCTGGGGCTAACACCGTGTGGAGAATaGGAGAAACAGCTTTTCTGG +
Preference number: 2 (lower is better)
Translates to: CDRNTLYSAELHAQLLGLTPCGE*EKQLFW
Trigger: CCAGAAAAGCTGTTTCTCCCATTCTCCACACGGTGT...TAGCCCCAGGAGTTGTGCGTGCAGCTCTGCACTGTACAGCGTGTTCCTGTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
3UTR-3UTR CCA 90 bp TTCTGCAGTTCACCACCGCAGAAATTACACTTCTGGCGCTCAGGAGCGAAGCCTCTGTGCATGACAAACTaGCCAAGTGCTGCAGACCGT +
Preference number: 2 (lower is better)
Translates to: FCSSPPQKLHFWRSGAKPLCMTN*PSAADR
Trigger: ACGGTCTGCAGCACTTGGCCAGTTTGTCATGCACAG...AGGCTTCGCTCCTGAGCGCCAGAAGTGTAATTTCTGCGGTGGTGAACTGCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225235.2
3UTR-3UTR TCA 90 bp CAGGTCAAAGGCATCTGGGATGGATGGCTGAGCAGCTTTATTTGCTCACAGGGATTACCCACTGTCTCCTaGGGTGCAATGGCATGTGCA +
Preference number: 2 (lower is better)
Translates to: QVKGIWDGWLSSFICSQGLPTVS*GAMACA
Trigger: TGCACATGCCATTGCACCTCAGGAGACAGTGGGTAA...TCCCTGTGAGCAAATAAAGCTGCTCAGCCATCCATCCCAGATGCCTTTGACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
3UTR-3UTR TCA 90 bp GGGGCTAACTCTAAGGCCAGAATTCCTCTAAAGAGCTCCCATGAGCCCTCAGTGTCAGGTCAGATAAGCTaGGGTCAGACAAGCTGGTCT +
Preference number: 2 (lower is better)
Translates to: GANSKARIPLKSSHEPSVSGQIS*GQTSWS
Trigger: AGACCAGCTTGTCTGACCTCAGCTTATCTGACCTGA...CACTGAGGGCTCATGGGAGCTCTTTAGAGGAATTCTGGCCTTAGAGTTAGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
3UTR-3UTR TCA 90 bp AAACTGCATCTGAAGAGGACGAGTTACCCACTGTCTCCTGAGGTGCAATGGCATGCTTGCTCTCGGAGGTaGAGGGGAACATCTGTAGGA +
Preference number: 2 (lower is better)
Translates to: KLHLKRTSYPLSPEVQWHACSRR*RGTSVG
Trigger: TCCTACAGATGTTCCCCTTCACCTCCGAGAGCAAGC...ATGCCATTGCACCTCAGGAGACAGTGGGTAACTCGTCCTCTTCAGATGCAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225235.2
3UTR-3UTR GCA 90 bp ACTCCTACTCAGGGAGCAAAGCATTGTGGTTGGTGCTGTGGCAGCACAGGACAGTCAGGAATGGCTTTCTaGAGTTCACCACCGCAGAAA +
Preference number: 2 (lower is better)
Translates to: TPTQGAKHCGWCCGSTGQSGMAF*SSPPQK
Trigger: TTTCTGCGGTGGTGAACTGCAGAAAGCCATTCCTGA...CTGTCCTGTGCTGCCACAGCACCAACCACAATGCTTTGCTCCCTGAGTAGGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
3UTR-3UTR CCA 90 bp TTCATAGCTGCAACGGAATTAGGACAGCAGTGTCACCGCTTGGCCACCTGGGCTCAGTCTGATCAGGAATaGCTTTCTGCAGTTCACCAC +
Preference number: 2 (lower is better)
Translates to: FIAATELGQQCHRLATWAQSDQE*LSAVHH
Trigger: GTGGTGAACTGCAGAAAGCCATTCCTGATCAGACTG...AGCCCAGGTGGCCAAGCGGTGACACTGCTGTCCTAATTCCGTTGCAGCTATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
3UTR-3UTR CCA 90 bp CTCTGGAGCCAAGAAGCTCTAGAATTTAAAACTACACCCACAAGGTTGTCTCAGACAGGGAGGAGCGGGTaGAGGGCCTGCACACACTCA +
Preference number: 2 (lower is better)
Translates to: LWSQEALEFKTTPTRLSQTGRSG*RACTHS
Trigger: TGAGTGTGTGCAGGCCCTCCACCCGCTCCTCCCTGT...CTGAGACAACCTTGTGGGTGTAGTTTTAAATTCTAGAGCTTCTTGGCTCCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091790.5
3UTR-3UTR CCA 90 bp TCACTAAAGTCTTGGTCTGCTTCAGCAAACTCAGTCTCCCCAGTGATGCCAGCCCTGGCTTCTTCTCAGTaGAGCAGAGCTTGGGTTGTG +
Preference number: 2 (lower is better)
Translates to: SLKSWSASANSVSPVMPALASSQ*SRAWVV
Trigger: CACAACCCAAGCTCTGCTCCACTGAGAAGAAGCCAG...GGCTGGCATCACTGGGGAGACTGAGTTTGCTGAAGCAGACCAAGACTTTAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000225205.2
ENSMUST00000225235.2
3UTR-3UTR GCA 90 bp TTAGCTTCCTGTGTGTTCCTTTCTACCCAGCATACAGGAGGAGTGAGTGACCAGCACTGTCTCCTGAGGTaGAATGGCATGTGCAGGCAT +
Preference number: 2 (lower is better)
Translates to: LASCVFLSTQHTGGVSDQHCLLR*NGMCRH
Trigger: ATGCCTGCACATGCCATTGCACCTCAGGAGACAGTG...CTGGTCACTCACTCCTCCTGTATGCTGGGTAGAAAGGAACACACAGGAAGCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
3UTR-3UTR GCA 90 bp TGTGACAGGAACACGCTGTACAGTGCAGAGCTGCACGCACAACTCCTGGGGCTACATCCATCCATATGCTaGTTTGCCCATATCCAAGTT +
Preference number: 2 (lower is better)
Translates to: CDRNTLYSAELHAQLLGLHPSIC*FAHIQV
Trigger: AACTTGGATATGGGCAAAGCAGCATATGGATGGATG...TAGCCCCAGGAGTTGTGCGTGCAGCTCTGCACTGTACAGCGTGTTCCTGTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225235.2
3UTR-3UTR TCA 90 bp CTGGTTGCAGTTTCGTCTGTCAGGGGAATATGCTCACAGGTTGCTAAGAACAAAATGGCCCCTGCAGTCTaGTCAGGAATGGCTTTCTGC +
Preference number: 2 (lower is better)
Translates to: LVAVSSVRGICSQVAKNKMAPAV*SGMAFC
Trigger: GCAGAAAGCCATTCCTGATCAGACTGCAGGGGCCAT...TTTGTTCTTAGCAACCTGTGAGCATATTCCCCTGACAGACGAAACTGCAACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
3UTR-3UTR GCA 90 bp GGGCTCCCTCTTAGAGCAGGGAGGAAACCAGCCCGTGAACTGTCAGCAAACAGTGTTTACATTCATAGCTaGAACGGAATTAGGACAGCA +
Preference number: 2 (lower is better)
Translates to: GLPLRAGRKPARELSANSVYIHS*NGIRTA
Trigger: TGCTGTCCTAATTCCGTTGCAGCTATGAATGTAAAC...ACTGTTTGCTGACAGTTCACGGGCTGGTTTCCTCCCTGCTCTAAGAGGGAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
3UTR-3UTR CCA 90 bp TCACTAAAGTCTTGGTCTGCTTCAGCAAACTCAGTCTCCCCAGTGATGCCAGCCCAGTCTGATCAGGAATaGCTTTCTGCAGTTCACCAC +
Preference number: 2 (lower is better)
Translates to: SLKSWSASANSVSPVMPAQSDQE*LSAVHH
Trigger: GTGGTGAACTGCAGAAAGCCATTCCTGATCAGACTG...GGCTGGCATCACTGGGGAGACTGAGTTTGCTGAAGCAGACCAAGACTTTAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225235.2
3UTR-3UTR CCA 90 bp TATAAGCACACGGACGAGGACTCCTACTCAGGGAGCAAAGCATTGTGGTTGGTGCAGTCTGATCAGGAATaGCTTTCTGCAGTTCACCAC +
Preference number: 2 (lower is better)
Translates to: YKHTDEDSYSGSKALWLVQSDQE*LSAVHH
Trigger: GTGGTGAACTGCAGAAAGCCATTCCTGATCAGACTG...CACCAACCACAATGCTTTGCTCCCTGAGTAGGAGTCCTCGTCCGTGTGCTTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
3UTR-3UTR CCA 90 bp CTTGTGAGGCTTTCTATAACTCTTGACAAGCATGCTGTTAGCTTCCTGTGTGTTCACCGCTTGGCCACCTaGGCTTGTGTGTGTGGTGTC +
Preference number: 2 (lower is better)
Translates to: LVRLSITLDKHAVSFLCVHRLAT*ACVCGV
Trigger: GACACCACACACACAAGCCCAGGTGGCCAAGCGGTG...AACACACAGGAAGCTAACAGCATGCTTGTCAAGAGTTATAGAAAGCCTCACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
3UTR-3UTR CCA 90 bp AAACTGCATCTGAAGAGGACGAGTTACCCACTGTCTCCTGAGGTGCAATGGCATCCATATTCACCACTGTaGGAAGGTCTGCTCTGCATC +
Preference number: 2 (lower is better)
Translates to: KLHLKRTSYPLSPEVQWHPYSPL*EGLLCI
Trigger: GATGCAGAGCAGACCTTCCCACAGTGGTGAATATGG...ATGCCATTGCACCTCAGGAGACAGTGGGTAACTCGTCCTCTTCAGATGCAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
3UTR-3UTR CCA 90 bp TTCTGCAGTTCACCACCGCAGAAATTACACTTCTGGCGCTCAGGAGCGAAGCCTGTCCATGAGAATCTCTaGAGCCAAGAAGCTCTAGAA +
Preference number: 2 (lower is better)
Translates to: FCSSPPQKLHFWRSGAKPVHENL*SQEALE
Trigger: TTCTAGAGCTTCTTGGCTCCAGAGATTCTCATGGAC...AGGCTTCGCTCCTGAGCGCCAGAAGTGTAATTTCTGCGGTGGTGAACTGCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091790.5
3UTR-3UTR CCA 90 bp ACTCCTACTCAGGGAGCAAAGCATTGTGGTTGGTGCTGTGGCAGCACAGGACAGTATGACAAAGGGCAATaGCTTTCACTGCTTCATGGA +
Preference number: 2 (lower is better)
Translates to: TPTQGAKHCGWCCGSTGQYDKGQ*LSLLHG
Trigger: TCCATGAAGCAGTGAAAGCCATTGCCCTTTGTCATA...CTGTCCTGTGCTGCCACAGCACCAACCACAATGCTTTGCTCCCTGAGTAGGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225235.2
3UTR CAA 90 bp GATACTCAGTTTGGCTTGACTGTATCGGCTCTCAAAATCCTGGTATaGCTCTTCTGTCAGAGTCCTCTTGGCTACCACAAGGGTTCGCAG +
Preference number: 2 (lower is better)
Translates to: DTQFGLTVSALKILV*LFCQSPLGYHKGSQ
Trigger: CTGCGAACCCTTGTGGTAGCCAAGAGGACTCTGACAGAAGAGCAATACCAGGATTTTGAGAGCCGATACAGTCAAGCCAAACTGAGTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225235.2
3UTR CAA 90 bp AACAGCAGCGACTTTCAGAGCCCGGTCATGGATACTCAGTTTGGCTaGACTGTATCGGCTCTCAAAATCCTGGTATTGCTCTTCTGTCAG +
Preference number: 2 (lower is better)
Translates to: NSSDFQSPVMDTQFG*TVSALKILVLLFCQ
Trigger: CTGACAGAAGAGCAATACCAGGATTTTGAGAGCCGATACAGTCAAGCCAAACTGAGTATCCATGACCGGGCTCTGAAAGTCGCTGCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225235.2
3UTR-3UTR TCA 90 bp CAGTCTGATCAGGAATGGCTTTCTGCAGTTCACCACCGCAGAAATTACACTTCTTTTCTTCAGTCCTCCTaGGTCACTGTGTGCCAGGTG +
Preference number: 2 (lower is better)
Translates to: QSDQEWLSAVHHRRNYTSFLQSS*VTVCQV
Trigger: CACCTGGCACACAGTGACTCAGGAGGACTGAAGAAA...AGAAGTGTAATTTCTGCGGTGGTGAACTGCAGAAAGCCATTCCTGATCAGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
3UTR-3UTR TCA 90 bp TCTGTCAGCGCCTTAGAAAGCTTCATGAAGACATTTTGTACAGAGCTGAGAATAACTCAGTCTCCCCAGTaGTGCCAGCCCGAGCCTCAT +
Preference number: 2 (lower is better)
Translates to: SVSALESFMKTFCTELRITQSPQ*CQPEPH
Trigger: ATGAGGCTCGGGCTGGCATCACTGGGGAGACTGAGT...TATTCTCAGCTCTGTACAAAATGTCTTCATGAAGCTTTCTAAGGCGCTGACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000225205.2
3UTR-3UTR GCA 90 bp CAGTCTGATCAGGAATGGCTTTCTGCAGTTCACCACCGCAGAAATTACACTTCTCACTGTCTCCTGAGGTaGAATGGCATGTGCAGGCAT +
Preference number: 2 (lower is better)
Translates to: QSDQEWLSAVHHRRNYTSHCLLR*NGMCRH
Trigger: ATGCCTGCACATGCCATTGCACCTCAGGAGACAGTG...AGAAGTGTAATTTCTGCGGTGGTGAACTGCAGAAAGCCATTCCTGATCAGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
3UTR-3UTR GCA 90 bp ACTCCTACTCAGGGAGCAAAGCATTGTGGTTGGTGCTGTGGCAGCACAGGACAGGTTTACATTCATAGCTaGAACGGAATTAGGACAGCA +
Preference number: 2 (lower is better)
Translates to: TPTQGAKHCGWCCGSTGQVYIHS*NGIRTA
Trigger: TGCTGTCCTAATTCCGTTGCAGCTATGAATGTAAAC...CTGTCCTGTGCTGCCACAGCACCAACCACAATGCTTTGCTCCCTGAGTAGGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
3UTR-3UTR GCA 90 bp GGCAGACCTGGGAGACAGTGCTCCAGAGAATCCCCAGATATAACCAGTGCACAGGTTTACATTCATAGCTaGAACGGAATTAGGACAGCA +
Preference number: 2 (lower is better)
Translates to: GRPGRQCSRESPDITSAQVYIHS*NGIRTA
Trigger: TGCTGTCCTAATTCCGTTGCAGCTATGAATGTAAAC...CTGTGCACTGGTTATATCTGGGGATTCTCTGGAGCACTGTCTCCCAGGTCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225235.2
3UTR-3UTR GCA 90 bp TATAAGCACACGGACGAGGACTCCTACTCAGGGAGCAAAGCATTGTGGTTGGTGGGCAATGGCTTTCACTaGTTCATGGATTCTACTGCT +
Preference number: 2 (lower is better)
Translates to: YKHTDEDSYSGSKALWLVGNGFH*FMDSTA
Trigger: AGCAGTAGAATCCATGAAGCAGTGAAAGCCATTGCC...CACCAACCACAATGCTTTGCTCCCTGAGTAGGAGTCCTCGTCCGTGTGCTTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225235.2
3UTR CAA 90 bp CAAACAGTGACACCGTGTGGAGAATGGGAGAAACAGCTTTTCTGGTaGCAGTTTCGTCTGTCAGGGGAATATGCTCACAGGTTGCTAAGA +
Preference number: 2 (lower is better)
Translates to: QTVTPCGEWEKQLFW*QFRLSGEYAHRLLR
Trigger: TCTTAGCAACCTGTGAGCATATTCCCCTGACAGACGAAACTGCAACCAGAAAAGCTGTTTCTCCCATTCTCCACACGGTGTCACTGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
3UTR-3UTR CCA 90 bp CAGTCTGATCAGGAATGGCTTTCTGCAGTTCACCACCGCAGAAATTACACTTCTGCATTTAGCTCCAAATaGGCTTCTCCCCGACTGGTT +
Preference number: 2 (lower is better)
Translates to: QSDQEWLSAVHHRRNYTSAFSSK*ASPRLV
Trigger: AACCAGTCGGGGAGAAGCCCATTTGGAGCTAAATGC...AGAAGTGTAATTTCTGCGGTGGTGAACTGCAGAAAGCCATTCCTGATCAGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225235.2
3UTR-3UTR TCA 90 bp CTTGTGAGGCTTTCTATAACTCTTGACAAGCATGCTGTTAGCTTCCTGTGTGTTAAGAGGTCCACTGTGTaGCAGGAACACGCTGTACAG +
Preference number: 2 (lower is better)
Translates to: LVRLSITLDKHAVSFLCVKRSTV*QEHAVQ
Trigger: CTGTACAGCGTGTTCCTGTCACACAGTGGACCTCTT...AACACACAGGAAGCTAACAGCATGCTTGTCAAGAGTTATAGAAAGCCTCACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
3UTR-3UTR TCA 90 bp CAGTCTGATCAGGAATGGCTTTCTGCAGTTCACCACCGCAGAAATTACACTTCTTCTGGACACCAAGTGTaGGCTTTTGGCAATACAAGT +
Preference number: 2 (lower is better)
Translates to: QSDQEWLSAVHHRRNYTSSGHQV*AFGNTS
Trigger: ACTTGTATTGCCAAAAGCTCACACTTGGTGTCCAGA...AGAAGTGTAATTTCTGCGGTGGTGAACTGCAGAAAGCCATTCCTGATCAGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225235.2
3UTR-3UTR GCA 90 bp GTTCTCATCACTAAAGTCTTGGTCTGCTTCAGCAAACTCAGTCTCCCCAGTGATGGCAATGGCTTTCACTaGTTCATGGATTCTACTGCT +
Preference number: 2 (lower is better)
Translates to: VLITKVLVCFSKLSLPSDGNGFH*FMDSTA
Trigger: AGCAGTAGAATCCATGAAGCAGTGAAAGCCATTGCC...ATCACTGGGGAGACTGAGTTTGCTGAAGCAGACCAAGACTTTAGTGATGAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000225205.2
ENSMUST00000225235.2
3UTR CAA 90 bp TACAGAGCTGAGAATAACGTGCTTACCTCCTCTTCTAGCCAATCATaGTACTGGACAATGGTGGACATTGCGACATCAGCACCTTTCATA +
Preference number: 2 (lower is better)
Translates to: YRAENNVLTSSSSQS*YWTMVDIATSAPFI
Trigger: TATGAAAGGTGCTGATGTCGCAATGTCCACCATTGTCCAGTACAATGATTGGCTAGAAGAGGAGGTAAGCACGTTATTCTCAGCTCTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225205.2
3UTR CAA 90 bp TTTTGTCTGTCAGTAAGTACACCAGGCGTCCAAGTTCTTCTGGTATaGTGCTGGTCCGAACAACTGTACCAGGAATATTCTCATCTTTCA +
Preference number: 2 (lower is better)
Translates to: FCLSVSTPGVQVLLV*CWSEQLYQEYSHLS
Trigger: TGAAAGATGAGAATATTCCTGGTACAGTTGTTCGGACCAGCACAATACCAGAAGAACTTGGACGCCTGGTGTACTTACTGACAGACAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000225205.2
ENSMUST00000225235.2
3UTR-3UTR GCA 90 bp TCTGTCAGCGCCTTAGAAAGCTTCATGAAGACATTTTGTACAGAGCTGAGAATAGACAATGGTGGACATTaGGACATCAGCACCTTTCAT +
Preference number: 2 (lower is better)
Translates to: SVSALESFMKTFCTELRIDNGGH*DISTFH
Trigger: ATGAAAGGTGCTGATGTCGCAATGTCCACCATTGTC...TATTCTCAGCTCTGTACAAAATGTCTTCATGAAGCTTTCTAAGGCGCTGACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225205.2
3UTR-3UTR CCA 90 bp TGGTATTGTGCTGGTCCGAACAACTGTACCAGGAATATTCTCATCTTTCATAATCTTCTGGTATTGTGCTaGTCCGAACAACTGTACCAG +
Preference number: 2 (lower is better)
Translates to: WYCAGPNNCTRNILIFHNLLVLC*SEQLYQ
Trigger: CTGGTACAGTTGTTCGGACCAGCACAATACCAGAAG...ATTATGAAAGATGAGAATATTCCTGGTACAGTTGTTCGGACCAGCACAATACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000225205.2
ENSMUST00000225235.2
3UTR-3UTR GCA 90 bp TCTGTCAGCGCCTTAGAAAGCTTCATGAAGACATTTTGTACAGAGCTGAGAATACATCCATCCATATGCTaGTTTGCCCATATCCAAGTT +
Preference number: 2 (lower is better)
Translates to: SVSALESFMKTFCTELRIHPSIC*FAHIQV
Trigger: AACTTGGATATGGGCAAAGCAGCATATGGATGGATG...TATTCTCAGCTCTGTACAAAATGTCTTCATGAAGCTTTCTAAGGCGCTGACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225205.2
3UTR-3UTR CCA 90 bp AAGAAGGTCACGGTTGTGATGAAGGCAACATCAAAATACTCATTTAGAAAAGCATCCCCGACTGGTTACTaGTCTGAAAACATGAATGTC +
Preference number: 2 (lower is better)
Translates to: KKVTVVMKATSKYSFRKASPTGY*SENMNV
Trigger: GACATTCATGTTTTCAGACCAGTAACCAGTCGGGGA...TGCTTTTCTAAATGAGTATTTTGATGTTGCCTTCATCACAACCGTGACCTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000225235.2
3UTR TCA 72 bp CGCCAGCAGTGCCAGTCCCTCATGCTGCCCAGCGCATaGGTCTCTACCTGGCCTCATGCCCCACTCAGGAGG +
Preference number: 3 (lower is better)
Translates to: RQQCQSLMLPSA*VSTWPHAPLRR
Trigger: CCTCCTGAGTGGGGCATGAGGCCAGGTAGAGACTCATGCGCTGGGCAGCATGAGGGACTGGCACTGCTGGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225235.2
3UTR GCA 72 bp CCTCCGTCGCCGATGGCACAGGTGCGCTTTCTGGTATaGTGGCGTAACAGGGTCACGATGTGGGCCTTCTGG +
Preference number: 3 (lower is better)
Translates to: PPSPMAQVRFLV*WRNRVTMWAFW
Trigger: CCAGAAGGCCCACATCGTGACCCTGTTACGCCAGCATACCAGAAAGCGCACCTGTGCCATCGGCGACGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225235.2
3UTR TCA 72 bp CAGGGAAGGAGGCCTGCAGAAGACACAGAAGCCCTGTaGGGGCTGGATAGTGCTCACCAGCAGGCAAGCCTG +
Preference number: 3 (lower is better)
Translates to: QGRRPAEDTEAL*GLDSAHQQASL
Trigger: CAGGCTTGCCTGCTGGTGAGCACTATCCAGCCCTCACAGGGCTTCTGTGTCTTCTGCAGGCCTCCTTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091790.5
3UTR GCA 72 bp CACTTCTGGCGCTCAGGAGCGAAGCCTGCCCAGCTGTaGCGAGGCTGTCACTTCCTCTCAGTAGCTGTTCAC +
Preference number: 3 (lower is better)
Translates to: HFWRSGAKPAQL*RGCHFLSVAVH
Trigger: GTGAACAGCTACTGAGAGGAAGTGACAGCCTCGGCACAGCTGGGCAGGCTTCGCTCCTGAGCGCCAGAAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
3UTR GCA 72 bp CCGGTTAAGGCTCTCCCCAAGGCTCCTCTCACAGCGTaGGCTTCCTTCCCCAAGGAAGTCAGGGTCTCAGTG +
Preference number: 3 (lower is better)
Translates to: PVKALPKAPLTA*ASFPKEVRVSV
Trigger: CACTGAGACCCTGACTTCCTTGGGGAAGGAAGCGCACGCTGTGAGAGGAGCCTTGGGGAGAGCCTTAACCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
3UTR CCA 72 bp GCTGAGCAGCTTTATTTGCTCACAGGGAGGAGCGGGTaGAGGGCCTGCACACACTCACGGCCGGTTAAGGCT +
Preference number: 3 (lower is better)
Translates to: AEQLYLLTGRSG*RACTHSRPVKA
Trigger: AGCCTTAACCGGCCGTGAGTGTGTGCAGGCCCTCCACCCGCTCCTCCCTGTGAGCAAATAAAGCTGCTCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
3UTR-3UTR CAA 90 bp GTGCAAAGGAGACTCCCACAGCCTGCTCCCGAGCGTGAAGAGCCGAGGCCAAGAAGCAAAGCATTGTGGTaGGTGCTGTGGCAGCACAGG +
Preference number: 3 (lower is better)
Translates to: VQRRLPQPAPEREEPRPRSKALW*VLWQHR
Trigger: CCTGTGCTGCCACAGCACCAACCACAATGCTTTGCT...TCTTGGCCTCGGCTCTTCACGCTCGGGAGCAGGCTGTGGGAGTCTCCTTTGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
3UTR-3UTR CAA 90 bp GGCAGACCTGGGAGACAGTGCTCCAGAGAATCCCCAGATATAACCAGTGCACAGCTTGGCCACCTGGGCTaGTGTGTGTGGTGTCCGCTG +
Preference number: 3 (lower is better)
Translates to: GRPGRQCSRESPDITSAQLGHLG*CVWCPL
Trigger: CAGCGGACACCACACACACAAGCCCAGGTGGCCAAG...CTGTGCACTGGTTATATCTGGGGATTCTCTGGAGCACTGTCTCCCAGGTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225235.2
3UTR-3UTR CAA 90 bp CCACAAGGGTTCGCAGGCCCTCTCGTGCCATGTTTCCACACTCCTCTTCTAGCCTTGGGTTGTGCCCACTaGGCTGTGAGTGTACCTGCA +
Preference number: 3 (lower is better)
Translates to: PQGFAGPLVPCFHTPLLALGCAH*AVSVPA
Trigger: TGCAGGTACACTCACAGCCAAGTGGGCACAACCCAA...GGCTAGAAGAGGAGTGTGGAAACATGGCACGAGAGGGCCTGCGAACCCTTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225235.2
3UTR TCA 72 bp GGTGCAATGGCATGTGCAGGCATGGCCCCTGCAGTCTaGTCAGGAATGGCTTTCTGCAGTTCACCACCGCAG +
Preference number: 3 (lower is better)
Translates to: GAMACAGMAPAV*SGMAFCSSPPQ
Trigger: CTGCGGTGGTGAACTGCAGAAAGCCATTCCTGATCAGACTGCAGGGGCCATGCCTGCACATGCCATTGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
3UTR TCA 72 bp TGTATGACCAGGGCTTCCTCCCATCCTTGTCTCGTGTaGCCCAACAGCGGCATCCTGAGGGGCAGATGCTGT +
Preference number: 3 (lower is better)
Translates to: CMTRASSHPCLV*PNSGILRGRCC
Trigger: ACAGCATCTGCCCCTCAGGATGCCGCTGTTGGGTCACACGAGACAAGGATGGGAGGAAGCCCTGGTCATACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
3UTR GCA 72 bp CGAGTTACCCACTGTCTCCTGAGGTGCAATGGCATGTaGAGGCATGGCCCCTGCAGTCTGATCAGGAATGGC +
Preference number: 3 (lower is better)
Translates to: RVTHCLLRCNGM*RHGPCSLIRNG
Trigger: GCCATTCCTGATCAGACTGCAGGGGCCATGCCTGCACATGCCATTGCACCTCAGGAGACAGTGGGTAACTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
3UTR GCA 72 bp AAAGGCATCTGGGATGGATGGCTGAGCAGCTTTATTTaGTCACAGGGAGGAGCGGGTGGAGGGCCTGCACAC +
Preference number: 3 (lower is better)
Translates to: KGIWDGWLSSFI*SQGGAGGGPAH
Trigger: GTGTGCAGGCCCTCCACCCGCTCCTCCCTGTGAGCAAATAAAGCTGCTCAGCCATCCATCCCAGATGCCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
3UTR CCA 72 bp GCTTTCTGCAGTTCACCACCGCAGAAATTACACTTCTaGCGCTCAGGAGCGAAGCCTGCCCAGCTGTGCCGA +
Preference number: 3 (lower is better)
Translates to: AFCSSPPQKLHF*RSGAKPAQLCR
Trigger: TCGGCACAGCTGGGCAGGCTTCGCTCCTGAGCGCCAGAAGTGTAATTTCTGCGGTGGTGAACTGCAGAAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
3UTR CCA 72 bp AGCATCTCTAGTGTGGGCCTCACATCAGCTTGCAGCTaGTCCTCCACCCCAGTGAGGCACAACAGCTCCATC +
Preference number: 3 (lower is better)
Translates to: SISSVGLTSACS*SSTPVRHNSSI
Trigger: GATGGAGCTGTTGTGCCTCACTGGGGTGGAGGACCAGCTGCAAGCTGATGTGAGGCCCACACTAGAGATGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225235.2
3UTR TCA 72 bp AAGGCGCTCAGGTCAAAGGCATCTGGGATGGATGGCTaGGCAGCTTTATTTGCTCACAGGGAGGAGCGGGTG +
Preference number: 3 (lower is better)
Translates to: KALRSKASGMDG*AALFAHREERV
Trigger: CACCCGCTCCTCCCTGTGAGCAAATAAAGCTGCTCAGCCATCCATCCCAGATGCCTTTGACCTGAGCGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
3UTR TCA 72 bp GGGCATGGGGGCATCTCGAAGTCAGGTCAGATAAGCTaGGGTCAGACAAGCTGGTCTGGGCTCCCTCTTAGA +
Preference number: 3 (lower is better)
Translates to: GHGGISKSGQIS*GQTSWSGLPLR
Trigger: TCTAAGAGGGAGCCCAGACCAGCTTGTCTGACCTCAGCTTATCTGACCTGACTTCGAGATGCCCCCATGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
3UTR GCA 72 bp CTCCTGAGGTGCAATGGCATGTGCAGGCATGGCCCCTaGAGTCTGATCAGGAATGGCTTTCTGCAGTTCACC +
Preference number: 3 (lower is better)
Translates to: LLRCNGMCRHGP*SLIRNGFLQFT
Trigger: GGTGAACTGCAGAAAGCCATTCCTGATCAGACTGCAGGGGCCATGCCTGCACATGCCATTGCACCTCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
3UTR CCA 72 bp CCACTGTCTCCTGAGGTGCAATGGCATGTGCAGGCATaGCCCCTGCAGTCTGATCAGGAATGGCTTTCTGCA +
Preference number: 3 (lower is better)
Translates to: PLSPEVQWHVQA*PLQSDQEWLSA
Trigger: TGCAGAAAGCCATTCCTGATCAGACTGCAGGGGCCATGCCTGCACATGCCATTGCACCTCAGGAGACAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
3UTR CCA 72 bp ACGGACGAGGACTCCTACTCAGGGAGCAAAGCATTGTaGTTGGTGCTGTGGCAGCACAGGACAGCTGAGTTC +
Preference number: 3 (lower is better)
Translates to: TDEDSYSGSKAL*LVLWQHRTAEF
Trigger: GAACTCAGCTGTCCTGTGCTGCCACAGCACCAACCACAATGCTTTGCTCCCTGAGTAGGAGTCCTCGTCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
3UTR-3UTR CAA 90 bp TTAGCTTCCTGTGTGTTCCTTTCTACCCAGCATACAGGAGGAGTGAGTGACCAGCTTGGCCACCTGGGCTaGTGTGTGTGGTGTCCGCTG +
Preference number: 3 (lower is better)
Translates to: LASCVFLSTQHTGGVSDQLGHLG*CVWCPL
Trigger: CAGCGGACACCACACACACAAGCCCAGGTGGCCAAG...CTGGTCACTCACTCCTCCTGTATGCTGGGTAGAAAGGAACACACAGGAAGCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
3UTR CCA 72 bp GCAGTGTCACCGCTTGGCCACCTGGGCTTGTGTGTGTaGTGTCCGCTGAAAAGCAAAACTGCATCTGAAGAG +
Preference number: 3 (lower is better)
Translates to: AVSPLGHLGLCV*CPLKSKTASEE
Trigger: CTCTTCAGATGCAGTTTTGCTTTTCAGCGGACACCACACACACAAGCCCAGGTGGCCAAGCGGTGACACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
3UTR CCA 72 bp ACGAGGACTCCTACTCAGGGAGCAAAGCATTGTGGTTaGTGCTGTGGCAGCACAGGACAGCTGAGTTCTACG +
Preference number: 3 (lower is better)
Translates to: TRTPTQGAKHCG*CCGSTGQLSST
Trigger: CGTAGAACTCAGCTGTCCTGTGCTGCCACAGCACCAACCACAATGCTTTGCTCCCTGAGTAGGAGTCCTCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
3UTR CCA 72 bp TCCTTTCCTTCAATCCCAATCCCACAGTCAGCAGCCTaGATCATGCTCACGTCATTCCCTCCGTCGCCGATG +
Preference number: 3 (lower is better)
Translates to: SFPSIPIPQSAA*IMLTSFPPSPM
Trigger: CATCGGCGACGGAGGGAATGACGTGAGCATGATCCAGGCTGCTGACTGTGGGATTGGGATTGAAGGAAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225235.2
3UTR-3UTR CAA 90 bp ACAGTGACACCGTGTGGAGAATGGGAGAAACAGCTTTTCTGGTTGCAGTTTCGTCTTGGCCACCTGGGCTaGTGTGTGTGGTGTCCGCTG +
Preference number: 3 (lower is better)
Translates to: TVTPCGEWEKQLFWLQFRLGHLG*CVWCPL
Trigger: CAGCGGACACCACACACACAAGCCCAGGTGGCCAAG...ACGAAACTGCAACCAGAAAAGCTGTTTCTCCCATTCTCCACACGGTGTCACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
3UTR-3UTR CAA 90 bp TTCTGCAGTTCACCACCGCAGAAATTACACTTCTGGCGCTCAGGAGCGAAGCCTTCAGGGAGCAAAGCATaGTGGTTGGTGCTGTGGCAG +
Preference number: 3 (lower is better)
Translates to: FCSSPPQKLHFWRSGAKPSGSKA*WLVLWQ
Trigger: CTGCCACAGCACCAACCACAATGCTTTGCTCCCTGA...AGGCTTCGCTCCTGAGCGCCAGAAGTGTAATTTCTGCGGTGGTGAACTGCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
3UTR-3UTR CAA 90 bp GGGGCTAACTCTAAGGCCAGAATTCCTCTAAAGAGCTCCCATGAGCCCTCAGTGTCAGGGAGCAAAGCATaGTGGTTGGTGCTGTGGCAG +
Preference number: 3 (lower is better)
Translates to: GANSKARIPLKSSHEPSVSGSKA*WLVLWQ
Trigger: CTGCCACAGCACCAACCACAATGCTTTGCTCCCTGA...CACTGAGGGCTCATGGGAGCTCTTTAGAGGAATTCTGGCCTTAGAGTTAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
3UTR TCA 72 bp CGCTTGGCCACCTGGGCTTGTGTGTGTGGTGTCCGCTaGAAAGCAAAACTGCATCTGAAGAGGACGAGTTAC +
Preference number: 3 (lower is better)
Translates to: RLATWACVCGVR*KAKLHLKRTSY
Trigger: GTAACTCGTCCTCTTCAGATGCAGTTTTGCTTTTCAGCGGACACCACACACACAAGCCCAGGTGGCCAAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
3UTR CCA 72 bp CACTCAGTCTACACCCTGACCCTGGCACTGTGGCCTTaGCTCATAGCCTTCTGGCACTTTCTTAATTCACGC +
Preference number: 3 (lower is better)
Translates to: HSVYTLTLALWP*LIAFWHFLNSR
Trigger: GCGTGAATTAAGAAAGTGCCAGAAGGCTATGAGCCAAGGCCACAGTGCCAGGGTCAGGGTGTAGACTGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
3UTR CCA 72 bp GACCAGCACTCAGTCTACACCCTGACCCTGGCACTGTaGCCTTGGCTCATAGCCTTCTGGCACTTTCTTAAT +
Preference number: 3 (lower is better)
Translates to: DQHSVYTLTLAL*PWLIAFWHFLN
Trigger: ATTAAGAAAGTGCCAGAAGGCTATGAGCCAAGGCCACAGTGCCAGGGTCAGGGTGTAGACTGAGTGCTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
3UTR CCA 72 bp AGCCTGACTCCTCCTGCTGTTCCATATTCACCACTGTaGGAAGGTCTGCTCTGCATCAAAGCAGCTGAACCG +
Preference number: 3 (lower is better)
Translates to: SLTPPAVPYSPL*EGLLCIKAAEP
Trigger: CGGTTCAGCTGCTTTGATGCAGAGCAGACCTTCCCACAGTGGTGAATATGGAACAGCAGGAGGAGTCAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
3UTR CCA 72 bp CAAAATCCTGGTATTGCTCTTCTGTCAGAGTCCTCTTaGCTACCACAAGGGTTCGCAGGCCCTCTCGTGCCA +
Preference number: 3 (lower is better)
Translates to: QNPGIALLSESS*LPQGFAGPLVP
Trigger: TGGCACGAGAGGGCCTGCGAACCCTTGTGGTAGCCAAGAGGACTCTGACAGAAGAGCAATACCAGGATTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225235.2
3UTR TCA 72 bp GTGTGTGTGGTGTCCGCTGAAAAGCAAAACTGCATCTaGAGAGGACGAGTTACCCACTGTCTCCTGAGGTGC +
Preference number: 3 (lower is better)
Translates to: VCVVSAEKQNCI*RGRVTHCLLRC
Trigger: GCACCTCAGGAGACAGTGGGTAACTCGTCCTCTTCAGATGCAGTTTTGCTTTTCAGCGGACACCACACACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
3UTR GCA 72 bp CTCCTGCTGTTCCATATTCACCACTGTGGGAAGGTCTaGTCTGCATCAAAGCAGCTGAACCGCAGAGGTTCA +
Preference number: 3 (lower is better)
Translates to: LLLFHIHHCGKV*SASKQLNRRGS
Trigger: TGAACCTCTGCGGTTCAGCTGCTTTGATGCAGAGCAGACCTTCCCACAGTGGTGAATATGGAACAGCAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
3UTR GCA 72 bp CTTGGTGCATCTCGACTTCTCAAGCCTGACTCCTCCTaGTGTTCCATATTCACCACTGTGGGAAGGTCTGCT +
Preference number: 3 (lower is better)
Translates to: LGASRLLKPDSS*CSIFTTVGRSA
Trigger: AGCAGACCTTCCCACAGTGGTGAATATGGAACAGCAGGAGGAGTCAGGCTTGAGAAGTCGAGATGCACCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
3UTR GCA 72 bp CTGGTAGGTGCGGTTCTCATCACTAAAGTCTTGGTCTaGTTCAGCAAACTCAGTCTCCCCAGTGATGCCAGC +
Preference number: 3 (lower is better)
Translates to: LVGAVLITKVLV*FSKLSLPSDAS
Trigger: GCTGGCATCACTGGGGAGACTGAGTTTGCTGAAGCAGACCAAGACTTTAGTGATGAGAACCGCACCTACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000225205.2
ENSMUST00000225235.2
3UTR CCA 72 bp CATGTGCAGGCATGGCCCCTGCAGTCTGATCAGGAATaGCTTTCTGCAGTTCACCACCGCAGAAATTACACT +
Preference number: 3 (lower is better)
Translates to: HVQAWPLQSDQE*LSAVHHRRNYT
Trigger: AGTGTAATTTCTGCGGTGGTGAACTGCAGAAAGCCATTCCTGATCAGACTGCAGGGGCCATGCCTGCACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
3UTR CCA 72 bp CTGACCCTGGCACTGTGGCCTTGGCTCATAGCCTTCTaGCACTTTCTTAATTCACGCTGTATCAATGAGGGC +
Preference number: 3 (lower is better)
Translates to: LTLALWPWLIAF*HFLNSRCINEG
Trigger: GCCCTCATTGATACAGCGTGAATTAAGAAAGTGCCAGAAGGCTATGAGCCAAGGCCACAGTGCCAGGGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
3UTR-3UTR CAA 90 bp CACGGACGAGGACTCCTACTCAGGGAGCAAAGCATTGTGGTTGGTGCTGTGGCAGCTAACAGCAGTGCCTaGAGGAATGGTTTACATTCA +
Preference number: 3 (lower is better)
Translates to: HGRGLLLREQSIVVGAVAANSSA*RNGLHS
Trigger: TGAATGTAAACCATTCCTCAAGGCACTGCTGTTAGC...TGCCACAGCACCAACCACAATGCTTTGCTCCCTGAGTAGGAGTCCTCGTCCGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
3UTR-3UTR CAA 90 bp ACTGTCTTCCCTGGTAAATGTTCCTTCAAAGCTATGAATATCCAGTTGTGGCTTGAGGGCTGGCAGCCGTaGTGTGCAGCTCACCGCCAC +
Preference number: 3 (lower is better)
Translates to: TVFPGKCSFKAMNIQLWLEGWQP*CAAHRH
Trigger: GTGGCGGTGAGCTGCACACAACGGCTGCCAGCCCTC...AAGCCACAACTGGATATTCATAGCTTTGAAGGAACATTTACCAGGGAAGACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224709.2
3UTR-3UTR CAA 90 bp ACAGAGCTGAGAATAACGTGCTTACCTCCTCTTCTAGCCAATCATTGTACTGGAGGAGCAGAGCTTGGGTaGTGCCCACTTGGCTGTGAG +
Preference number: 3 (lower is better)
Translates to: TELRITCLPPLLANHCTGGAELG*CPLGCE
Trigger: CTCACAGCCAAGTGGGCACAACCCAAGCTCTGCTCC...TCCAGTACAATGATTGGCTAGAAGAGGAGGTAAGCACGTTATTCTCAGCTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225205.2
3UTR TCA 72 bp CTAACTAGGACTTGGTGCATCTCGACTTCTCAAGCCTaGCTCCTCCTGCTGTTCCATATTCACCACTGTGGG +
Preference number: 3 (lower is better)
Translates to: LTRTWCISTSQA*LLLLFHIHHCG
Trigger: CCCACAGTGGTGAATATGGAACAGCAGGAGGAGTCAGGCTTGAGAAGTCGAGATGCACCAAGTCCTAGTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
3UTR CCA 72 bp TCCTACTCAGGGAGCAAAGCATTGTGGTTGGTGCTGTaGCAGCACAGGACAGCTGAGTTCTACGTAAACAGT +
Preference number: 3 (lower is better)
Translates to: SYSGSKALWLVL*QHRTAEFYVNS
Trigger: ACTGTTTACGTAGAACTCAGCTGTCCTGTGCTGCCACAGCACCAACCACAATGCTTTGCTCCCTGAGTAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
3UTR CCA 72 bp CCAGCCCGTGAACTGTCAGCAAACAGTGACACCGTGTaGAGAATGGGAGAAACAGCTTTTCTGGTTGCAGTT +
Preference number: 3 (lower is better)
Translates to: PARELSANSDTV*RMGETAFLVAV
Trigger: AACTGCAACCAGAAAAGCTGTTTCTCCCATTCTCCACACGGTGTCACTGTTTGCTGACAGTTCACGGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
3UTR GCA 72 bp CACCGTGTGGAGAATGGGAGAAACAGCTTTTCTGGTTaGAGTTTCGTCTGTCAGGGGAATATGCTCACAGGT +
Preference number: 3 (lower is better)
Translates to: HRVENGRNSFSG*SFVCQGNMLTG
Trigger: ACCTGTGAGCATATTCCCCTGACAGACGAAACTGCAACCAGAAAAGCTGTTTCTCCCATTCTCCACACGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
3UTR GCA 72 bp CACAACATGGACAAACTCGTCCTCGAAGAGCAGCAGTaGCCCATACATGAGGATGCCTCCTTGGTAAATACT +
Preference number: 3 (lower is better)
Translates to: HNMDKLVLEEQQ*PIHEDASLVNT
Trigger: AGTATTTACCAAGGAGGCATCCTCATGTATGGGGCACTGCTGCTCTTCGAGGACGAGTTTGTCCATGTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225235.2
3UTR-3UTR CAA 90 bp TCTGTCAGCGCCTTAGAAAGCTTCATGAAGACATTTTGTACAGAGCTGAGAATAATGATGCCCATCCGCTaGCTCTCGGAGGTGAAGGGG +
Preference number: 3 (lower is better)
Translates to: SVSALESFMKTFCTELRIMMPIR*LSEVKG
Trigger: CCCCTTCACCTCCGAGAGCAAGCGGATGGGCATCAT...TATTCTCAGCTCTGTACAAAATGTCTTCATGAAGCTTTCTAAGGCGCTGACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225205.2
3UTR TCA 72 bp TCCCTGGTACAGCGGTACAGATGCAAAGTAGAAGACTaGAGAAAACACAGCCTGCATGGTGGAGATGATGAG +
Preference number: 3 (lower is better)
Translates to: SLVQRYRCKVED*RKHSLHGGDDE
Trigger: CTCATCATCTCCACCATGCAGGCTGTGTTTTCTTCAGTCTTCTACTTTGCATCTGTACCGCTGTACCAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225235.2
3UTR TCA 72 bp ATATCGGGTGTGGCTGCTGTGCTGACAGACCATGTCTaGAGTCTGAGTGAAACAAGAACAAGAACAAGGCAC +
Preference number: 3 (lower is better)
Translates to: ISGVAAVLTDHV*SLSETRTRTRH
Trigger: GTGCCTTGTTCTTGTTCTTGTTTCACTCAGACTTCAGACATGGTCTGTCAGCACAGCAGCCACACCCGATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225205.2
3UTR CCA 72 bp GTGAACTGTCAGCAAACAGTGACACCGTGTGGAGAATaGGAGAAACAGCTTTTCTGGTTGCAGTTTCGTCTG +
Preference number: 3 (lower is better)
Translates to: VNCQQTVTPCGE*EKQLFWLQFRL
Trigger: CAGACGAAACTGCAACCAGAAAAGCTGTTTCTCCCATTCTCCACACGGTGTCACTGTTTGCTGACAGTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
3UTR CCA 72 bp CAGCGACTTTCAGAGCCCGGTCATGGATACTCAGTTTaGCTTGACTGTATCGGCTCTCAAAATCCTGGTATT +
Preference number: 3 (lower is better)
Translates to: QRLSEPGHGYSV*LDCIGSQNPGI
Trigger: AATACCAGGATTTTGAGAGCCGATACAGTCAAGCCAAACTGAGTATCCATGACCGGGCTCTGAAAGTCGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225235.2
3UTR-3UTR CAA 90 bp AGTGTCCGTTCCGTAGGAGACAGTGCCCAGATGGAGCCGCTTAAATACCATTTCCATCCATATGCTGCTTaGCCCATATCCAAGTTTACT +
Preference number: 3 (lower is better)
Translates to: SVRSVGDSAQMEPLKYHFHPYAA*PISKFT
Trigger: AGTAAACTTGGATATGGGCAAAGCAGCATATGGATG...GAAATGGTATTTAAGCGGCTCCATCTGGGCACTGTCTCCTACGGAACGGACACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000225205.2
ENSMUST00000225235.2
3UTR-3UTR CAA 90 bp TCTGTCAGCGCCTTAGAAAGCTTCATGAAGACATTTTGTACAGAGCTGAGAATATCAGTGGAGCAGAGCTaGGGTTGTGCCCACTTGGCT +
Preference number: 3 (lower is better)
Translates to: SVSALESFMKTFCTELRISVEQS*GCAHLA
Trigger: AGCCAAGTGGGCACAACCCAAGCTCTGCTCCACTGA...TATTCTCAGCTCTGTACAAAATGTCTTCATGAAGCTTTCTAAGGCGCTGACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225205.2
3UTR-3UTR CAA 90 bp GTGGTGACAACAGTATTTCAAGTATGGGAAGGGACTACTTTTCTGTCAGCGCCTCAAGTTCTTCTGGTATaGTGCTGGTCCGAACAACTG +
Preference number: 3 (lower is better)
Translates to: VVTTVFQVWEGTTFLSAPQVLLV*CWSEQL
Trigger: CAGTTGTTCGGACCAGCACAATACCAGAAGAACTTG...AGGCGCTGACAGAAAAGTAGTCCCTTCCCATACTTGAAATACTGTTGTCACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225205.2
3UTR TCA 72 bp ACTTTCAGAGCCCGGTCATGGATACTCAGTTTGGCTTaGCTGTATCGGCTCTCAAAATCCTGGTATTGCTCT +
Preference number: 3 (lower is better)
Translates to: TFRARSWILSLA*LYRLSKSWYCS
Trigger: AGAGCAATACCAGGATTTTGAGAGCCGATACAGTCAAGCCAAACTGAGTATCCATGACCGGGCTCTGAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225235.2
3UTR CCA 72 bp CAGTCATGCTTCCTTCTAAACGCATTTAGCTCCAAATaGGCTTCTCCCCGACTGGTTACTGGTCTGAAAACA +
Preference number: 3 (lower is better)
Translates to: QSCFLLNAFSSK*ASPRLVTGLKT
Trigger: TGTTTTCAGACCAGTAACCAGTCGGGGAGAAGCCCATTTGGAGCTAAATGCGTTTAGAAGGAAGCATGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000225235.2
3UTR CCA 72 bp GAGCTGGTCCCAGTCCTAGCCACCTCAGTCTCACTCTaGAACCCAATTACTAATCAATACACAACTCTAACA +
Preference number: 3 (lower is better)
Translates to: ELVPVLATSVSL*NPITNQYTTLT
Trigger: TGTTAGAGTTGTGTATTGATTAGTAATTGGGTTCCAGAGTGAGACTGAGGTGGCTAGGACTGGGACCAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225205.2
3UTR-3UTR CAA 90 bp AAAGAGAAGGAGGAACCGAAAAAGATTACGGTACCATGGGCCTGCAAATCCCTGGCTATGAATATCCAGTaGTGGCTTCTGAGCATAAAC +
Preference number: 3 (lower is better)
Translates to: KEKEEPKKITVPWACKSLAMNIQ*WLLSIN
Trigger: GTTTATGCTCAGAAGCCACAACTGGATATTCATAGC...CAGGGATTTGCAGGCCCATGGTACCGTAATCTTTTTCGGTTCCTCCTTCTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000224709.2
3UTR TCA 72 bp AATGATCCTTTATTAAGCAGTTTTCTTCAGTCCTCCTaGGTCACTGTGTGCCAGGTGTATGACCAGGGCTTC +
Preference number: 3 (lower is better)
Translates to: NDPLLSSFLQSS*VTVCQVYDQGF
Trigger: GAAGCCCTGGTCATACACCTGGCACACAGTGACTCAGGAGGACTGAAGAAAACTGCTTAATAAAGGATCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
3UTR GCA 72 bp GTAAGTACACCAGGCGTCCAAGTTCTTCTGGTATTGTaGTGGTCCGAACAACTGTACCAGGAATATTCTCAT +
Preference number: 3 (lower is better)
Translates to: VSTPGVQVLLVL*WSEQLYQEYSH
Trigger: ATGAGAATATTCCTGGTACAGTTGTTCGGACCAGCACAATACCAGAAGAACTTGGACGCCTGGTGTACTTAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000225205.2
ENSMUST00000225235.2
3UTR GCA 72 bp TCCAGAGAATCCCCAGATATAACCAGTGCACAGTCATaGTTCCTTCTAAACGCATTTAGCTCCAAATGGGCT +
Preference number: 3 (lower is better)
Translates to: SRESPDITSAQS*FLLNAFSSKWA
Trigger: AGCCCATTTGGAGCTAAATGCGTTTAGAAGGAAGCATGACTGTGCACTGGTTATATCTGGGGATTCTCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225235.2
3UTR CCA 72 bp AGTACACCAGGCGTCCAAGTTCTTCTGGTATTGTGCTaGTCCGAACAACTGTACCAGGAATATTCTCATCTT +
Preference number: 3 (lower is better)
Translates to: STPGVQVLLVLC*SEQLYQEYSHL
Trigger: AAGATGAGAATATTCCTGGTACAGTTGTTCGGACCAGCACAATACCAGAAGAACTTGGACGCCTGGTGTACT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000225205.2
ENSMUST00000225235.2
3UTR CCA 72 bp ATGTTTCCACACTCCTCTTCTAGCCAATCATTGTACTaGACAATGGTGGACATTGCGACATCAGCACCTTTC +
Preference number: 3 (lower is better)
Translates to: MFPHSSSSQSLY*TMVDIATSAPF
Trigger: GAAAGGTGCTGATGTCGCAATGTCCACCATTGTCCAGTACAATGATTGGCTAGAAGAGGAGTGTGGAAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225235.2
3UTR GCA 72 bp AAATCAAACTGGCCTGAAGGAGATATTGATTCATATTaGCAAGACCATCGTGAATATCGGGTGTGGCTGCTG +
Preference number: 3 (lower is better)
Translates to: KSNWPEGDIDSY*QDHREYRVWLL
Trigger: CAGCAGCCACACCCGATATTCACGATGGTCTTGGCAATATGAATCAATATCTCCTTCAGGCCAGTTTGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225205.2
3UTR CCA 72 bp CACACTCCTCTTCTAGCCAATCATTGTACTGGACAATaGTGGACATTGCGACATCAGCACCTTTCATATAGA +
Preference number: 3 (lower is better)
Translates to: HTPLLANHCTGQ*WTLRHQHLSYR
Trigger: TCTATATGAAAGGTGCTGATGTCGCAATGTCCACCATTGTCCAGTACAATGATTGGCTAGAAGAGGAGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225235.2
3UTR CCA 72 bp CCTCCTCTTCTAGCCAATCATTGTACTGGACAATGGTaGACATTGCGACATCAGCACCTTTCATATAGAATG +
Preference number: 3 (lower is better)
Translates to: PPLLANHCTGQW*TLRHQHLSYRM
Trigger: CATTCTATATGAAAGGTGCTGATGTCGCAATGTCCACCATTGTCCAGTACAATGATTGGCTAGAAGAGGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225205.2
3UTR TCA 72 bp GAGAGAGAAATATCATCCTTGGTCACGAATGCTGCTTaGAGTGGTGACAACAGTATTTCAAGTATGGGAAGG +
Preference number: 3 (lower is better)
Translates to: EREISSLVTNAA*SGDNSISSMGR
Trigger: CCTTCCCATACTTGAAATACTGTTGTCACCACTTCAAGCAGCATTCGTGACCAAGGATGATATTTCTCTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225205.2
3UTR CCA 72 bp ACTCCTCTTCTAGCCAATCATTGTACTGGACAATGGTaGACATTGCGACATCAGCACCTTTCATATAGAATG +
Preference number: 3 (lower is better)
Translates to: TPLLANHCTGQW*TLRHQHLSYRM
Trigger: CATTCTATATGAAAGGTGCTGATGTCGCAATGTCCACCATTGTCCAGTACAATGATTGGCTAGAAGAGGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225235.2
3UTR TCA 72 bp AATATCATCCTTGGTCACGAATGCTGCTTGAAGTGGTaGCAACAGTATTTCAAGTATGGGAAGGGACTACTT +
Preference number: 3 (lower is better)
Translates to: NIILGHECCLKW*QQYFKYGKGLL
Trigger: AAGTAGTCCCTTCCCATACTTGAAATACTGTTGTCACCACTTCAAGCAGCATTCGTGACCAAGGATGATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225205.2
3UTR TCA 72 bp AGAACAACTAAAGCCAGAAATAGCGCCTTTGTCAGCTaGTTGAGTTCGAGGTCCAATAAACCAACCTTATTT +
Preference number: 3 (lower is better)
Translates to: RTTKARNSAFVS*LSSRSNKPTLF
Trigger: AAATAAGGTTGGTTTATTGGACCTCGAACTCAATCAGCTGACAAAGGCGCTATTTCTGGCTTTAGTTGTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224709.2
3UTR-3UTR CAA 90 bp AAGAAGGTCACGGTTGTGATGAAGGCAACATCAAAATACTCATTTAGAAAAGCACATCCATATGCTGCTTaGCCCATATCCAAGTTTACT +
Preference number: 3 (lower is better)
Translates to: KKVTVVMKATSKYSFRKAHPYAA*PISKFT
Trigger: AGTAAACTTGGATATGGGCAAAGCAGCATATGGATG...TGCTTTTCTAAATGAGTATTTTGATGTTGCCTTCATCACAACCGTGACCTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000225235.2
3UTR TCA 72 bp TACAGATATAAAATGCATCAGCTAACAGCAGTGCCTTaGGGAATGGTTTACATTCATAGCTGCAACGGAATT +
Preference number: 3 (lower is better)
Translates to: YRYKMHQLTAVP*GMVYIHSCNGI
Trigger: AATTCCGTTGCAGCTATGAATGTAAACCATTCCTCAAGGCACTGCTGTTAGCTGATGCATTTTATATCTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
3UTR CCA 72 bp GGTAAATGTTCCTTCAAAGCTATGAATATCCAGTTGTaGCTTCTGAGCATAAACATAGGCACTGATAGAAAA +
Preference number: 3 (lower is better)
Translates to: GKCSFKAMNIQL*LLSINIGTDRK
Trigger: TTTTCTATCAGTGCCTATGTTTATGCTCAGAAGCCACAACTGGATATTCATAGCTTTGAAGGAACATTTACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224709.2
3UTR TCA 72 bp TCAATACACAACTCTAACAGTGACTATTACATCTCATaGGGCGAACTACAAATACACTTGTTCAGGAATAAT +
Preference number: 3 (lower is better)
Translates to: SIHNSNSDYYIS*GELQIHLFRNN
Trigger: ATTATTCCTGAACAAGTGTATTTGTAGTTCGCCTCATGAGATGTAATAGTCACTGTTAGAGTTGTGTATTGA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225205.2
3UTR TCA 72 bp ACTAGGTCTTCAGGGAGTTTAATTTATTCATGTCTCTaGTTAAATCAAACTGGCCTGAAGGAGATATTGATT +
Preference number: 3 (lower is better)
Translates to: TRSSGSLIYSCL*LNQTGLKEILI
Trigger: AATCAATATCTCCTTCAGGCCAGTTTGATTTAATCAGAGACATGAATAAATTAAACTCCCTGAAGACCTAGT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225205.2
CDS-3UTR TCA 90 bp GCCCTCAGCCCGCCAGCAGTGCCAGTCCCTCATGCTGCCCAGCGCATGAGTCTCCATAGCAGCCCAGACTaGGGAACTCCGCCACAACCA +
Preference number: 4 (lower is better)
Translates to: ALSPPAVPVPHAAQRMSLHSSPD*GTPPQP
Trigger: TGGTTGTGGCGGAGTTCCTCAGTCTGGGCTGCTATG...GAGACTCATGCGCTGGGCAGCATGAGGGACTGGCACTGCTGGCGGGCTGAGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CCA 90 bp GTGCAAAGGAGACTCCCACAGCCTGCTCCCGAGCGTGAAGAGCCGAGGCCAAGACCACCTCATCGGGGCTaGAGGCCTGGTAGGTGCGGT +
Preference number: 4 (lower is better)
Translates to: VQRRLPQPAPEREEPRPRPPHRG*RPGRCG
Trigger: ACCGCACCTACCAGGCCTCCAGCCCCGATGAGGTGG...TCTTGGCCTCGGCTCTTCACGCTCGGGAGCAGGCTGTGGGAGTCTCCTTTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CCA 90 bp AGGACAGCAGTGTCACCGCTTGGCCACCTGGGCTTGTGTGTGTGGTGTCCGCTGCCACCTCATCGGGGCTaGAGGCCTGGTAGGTGCGGT +
Preference number: 4 (lower is better)
Translates to: RTAVSPLGHLGLCVWCPLPPHRG*RPGRCG
Trigger: ACCGCACCTACCAGGCCTCCAGCCCCGATGAGGTGG...CAGCGGACACCACACACACAAGCCCAGGTGGCCAAGCGGTGACACTGCTGTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CCA 90 bp CCTGCCCAGCTGTGCCGAGGCTGTCACTTCCTCTCAGTAGCTGTTCACGCAGTGGACTCATCCTCCAGCTaGTACCTGCCGCGCCGGTCG +
Preference number: 4 (lower is better)
Translates to: PAQLCRGCHFLSVAVHAVDSSSS*YLPRRS
Trigger: CGACCGGCGCGGCAGGTACCAGCTGGAGGATGAGTC...CACTGCGTGAACAGCTACTGAGAGGAAGTGACAGCCTCGGCACAGCTGGGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
CDS-3UTR CCA 90 bp GTGCAAAGGAGACTCCCACAGCCTGCTCCCGAGCGTGAAGAGCCGAGGCCAAGAACGATGTGGGCCTTCTaGGTGGGTGAGCAGCGGCAG +
Preference number: 4 (lower is better)
Translates to: VQRRLPQPAPEREEPRPRTMWAF*VGEQRQ
Trigger: CTGCCGCTGCTCACCCACCCAGAAGGCCCACATCGT...TCTTGGCCTCGGCTCTTCACGCTCGGGAGCAGGCTGTGGGAGTCTCCTTTGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR GCA 90 bp CGCCCTCAGCCCGCCAGCAGTGCCAGTCCCTCATGCTGCCCAGCGCATGAGTCTATGATGAGGCCCCTGTaGATGACAAACTGGCCAAGT +
Preference number: 4 (lower is better)
Translates to: RPQPASSASPSCCPAHESMMRPL*MTNWPS
Trigger: ACTTGGCCAGTTTGTCATGCACAGGGGCCTCATCAT...AGACTCATGCGCTGGGCAGCATGAGGGACTGGCACTGCTGGCGGGCTGAGGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CCA 90 bp GCCCTCAGCCCGCCAGCAGTGCCAGTCCCTCATGCTGCCCAGCGCATGAGTCTCGTCCTTGTACAGCTCTaGGTAGAGAATCGCCATCTC +
Preference number: 4 (lower is better)
Translates to: ALSPPAVPVPHAAQRMSLVLVQL*VENRHL
Trigger: GAGATGGCGATTCTCTACCCAGAGCTGTACAAGGAC...GAGACTCATGCGCTGGGCAGCATGAGGGACTGGCACTGCTGGCGGGCTGAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR TCA 90 bp GCCCTCAGCCCGCCAGCAGTGCCAGTCCCTCATGCTGCCCAGCGCATGAGTCTCTGCTGGTACAAACTGTaGGCAGGACACTACCAGAAA +
Preference number: 4 (lower is better)
Translates to: ALSPPAVPVPHAAQRMSLCWYKL*AGHYQK
Trigger: TTTCTGGTAGTGTCCTGCTCACAGTTTGTACCAGCA...GAGACTCATGCGCTGGGCAGCATGAGGGACTGGCACTGCTGGCGGGCTGAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
CDS-3UTR CCA 90 bp CACGGACGAGGACTCCTACTCAGGGAGCAAAGCATTGTGGTTGGTGCTGTGGCAACGATGTGGGCCTTCTaGGTGGGTGAGCAGCGGCAG +
Preference number: 4 (lower is better)
Translates to: HGRGLLLREQSIVVGAVATMWAF*VGEQRQ
Trigger: CTGCCGCTGCTCACCCACCCAGAAGGCCCACATCGT...TGCCACAGCACCAACCACAATGCTTTGCTCCCTGAGTAGGAGTCCTCGTCCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR TCA 90 bp AGGTCCCCGAGGGCTGGCAGCCGTTGTGTGCAGCTCACCGCCACCTTCAGCTTCTGCTGGTACAAACTGTaGGCAGGACACTACCAGAAA +
Preference number: 4 (lower is better)
Translates to: RSPRAGSRCVQLTATFSFCWYKL*AGHYQK
Trigger: TTTCTGGTAGTGTCCTGCTCACAGTTTGTACCAGCA...GAAGCTGAAGGTGGCGGTGAGCTGCACACAACGGCTGCCAGCCCTCGGGGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224709.2
CDS-3UTR TCA 90 bp ACTCCTACTCAGGGAGCAAAGCATTGTGGTTGGTGCTGTGGCAGCACAGGACAGTCCGTCCGTGCACCATaGGCAGCCTGCCGATGTGTC +
Preference number: 4 (lower is better)
Translates to: TPTQGAKHCGWCCGSTGQSVRAP*AACRCV
Trigger: GACACATCGGCAGGCTGCTCATGGTGCACGGACGGA...CTGTCCTGTGCTGCCACAGCACCAACCACAATGCTTTGCTCCCTGAGTAGGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CCA 90 bp CGCCCTCAGCCCGCCAGCAGTGCCAGTCCCTCATGCTGCCCAGCGCATGAGTCTAGCCAATCATTGTACTaGACAATGGTGGACATTGCG +
Preference number: 4 (lower is better)
Translates to: RPQPASSASPSCCPAHESSQSLY*TMVDIA
Trigger: CGCAATGTCCACCATTGTCCAGTACAATGATTGGCT...AGACTCATGCGCTGGGCAGCATGAGGGACTGGCACTGCTGGCGGGCTGAGGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CCA 90 bp CGCCCTCAGCCCGCCAGCAGTGCCAGTCCCTCATGCTGCCCAGCGCATGAGTCTCGGCTCTCAAAATCCTaGTATTGCTCTTCTGTCAGA +
Preference number: 4 (lower is better)
Translates to: RPQPASSASPSCCPAHESRLSKS*YCSSVR
Trigger: TCTGACAGAAGAGCAATACCAGGATTTTGAGAGCCG...AGACTCATGCGCTGGGCAGCATGAGGGACTGGCACTGCTGGCGGGCTGAGGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR TCA 90 bp TTCATAGCTGCAACGGAATTAGGACAGCAGTGTCACCGCTTGGCCACCTGGGCTACTCAGTCTCCCCAGTaGTGCCAGCCCGAGCCTCAT +
Preference number: 4 (lower is better)
Translates to: FIAATELGQQCHRLATWATQSPQ*CQPEPH
Trigger: ATGAGGCTCGGGCTGGCATCACTGGGGAGACTGAGT...AGCCCAGGTGGCCAAGCGGTGACACTGCTGTCCTAATTCCGTTGCAGCTATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CCA 90 bp CAGGTCAAAGGCATCTGGGATGGATGGCTGAGCAGCTTTATTTGCTCACAGGGAGACTCATCCTCCAGCTaGTACCTGCCGCGCCGGTCG +
Preference number: 4 (lower is better)
Translates to: QVKGIWDGWLSSFICSQGDSSSS*YLPRRS
Trigger: CGACCGGCGCGGCAGGTACCAGCTGGAGGATGAGTC...TCCCTGTGAGCAAATAAAGCTGCTCAGCCATCCATCCCAGATGCCTTTGACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CCA 90 bp CGCCCTCAGCCCGCCAGCAGTGCCAGTCCCTCATGCTGCCCAGCGCATGAGTCTGAATGTCTTGTGTTCTaGACACCAAGTGTGAGCTTT +
Preference number: 4 (lower is better)
Translates to: RPQPASSASPSCCPAHESECLVF*TPSVSF
Trigger: AAAGCTCACACTTGGTGTCCAGAACACAAGACATTC...AGACTCATGCGCTGGGCAGCATGAGGGACTGGCACTGCTGGCGGGCTGAGGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CCA 90 bp GCCCTCAGCCCGCCAGCAGTGCCAGTCCCTCATGCTGCCCAGCGCATGAGTCTCGAATGTCTTGTGTTCTaGACACCAAGTGTGAGCTTT +
Preference number: 4 (lower is better)
Translates to: ALSPPAVPVPHAAQRMSLECLVF*TPSVSF
Trigger: AAAGCTCACACTTGGTGTCCAGAACACAAGACATTC...GAGACTCATGCGCTGGGCAGCATGAGGGACTGGCACTGCTGGCGGGCTGAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
3UTR CAA 72 bp CACACGGACGAGGACTCCTACTCAGGGAGCAAAGCATaGTGGTTGGTGCTGTGGCAGCACAGGACAGCTGAG +
Preference number: 4 (lower is better)
Translates to: HTDEDSYSGSKA*WLVLWQHRTAE
Trigger: CTCAGCTGTCCTGTGCTGCCACAGCACCAACCACAATGCTTTGCTCCCTGAGTAGGAGTCCTCGTCCGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
CDS-3UTR TCA 90 bp GTGCAAAGGAGACTCCCACAGCCTGCTCCCGAGCGTGAAGAGCCGAGGCCAAGATGCTGGTACAAACTGTaGGCAGGACACTACCAGAAA +
Preference number: 4 (lower is better)
Translates to: VQRRLPQPAPEREEPRPRCWYKL*AGHYQK
Trigger: TTTCTGGTAGTGTCCTGCTCACAGTTTGTACCAGCA...TCTTGGCCTCGGCTCTTCACGCTCGGGAGCAGGCTGTGGGAGTCTCCTTTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
CDS-3UTR TCA 90 bp AGGACAGCAGTGTCACCGCTTGGCCACCTGGGCTTGTGTGTGTGGTGTCCGCTGGAGTGTTCTCTATGCTaGGACTCTCATGAATGGGAG +
Preference number: 4 (lower is better)
Translates to: RTAVSPLGHLGLCVWCPLECSLC*DSHEWE
Trigger: CTCCCATTCATGAGAGTCTCAGCATAGAGAACACTC...CAGCGGACACCACACACACAAGCCCAGGTGGCCAAGCGGTGACACTGCTGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
CDS-3UTR TCA 90 bp TGTGACAGGAACACGCTGTACAGTGCAGAGCTGCACGCACAACTCCTGGGGCTAGGGATCTTCCCTTGGTaGGGTCCTTGTACAGCTCTG +
Preference number: 4 (lower is better)
Translates to: CDRNTLYSAELHAQLLGLGIFPW*GPCTAL
Trigger: CAGAGCTGTACAAGGACCTCACCAAGGGAAGATCCC...TAGCCCCAGGAGTTGTGCGTGCAGCTCTGCACTGTACAGCGTGTTCCTGTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR TCA 90 bp CAATGGCATGTGCAGGCATGGCCCCTGCAGTCTGATCAGGAATGGCTTTCTGCACATAGCAGCCCAGACTaGGGAACTCCGCCACAACCA +
Preference number: 4 (lower is better)
Translates to: QWHVQAWPLQSDQEWLSAHSSPD*GTPPQP
Trigger: TGGTTGTGGCGGAGTTCCTCAGTCTGGGCTGCTATG...TGCAGAAAGCCATTCCTGATCAGACTGCAGGGGCCATGCCTGCACATGCCATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR GCA 90 bp GGGCTCCCTCTTAGAGCAGGGAGGAAACCAGCCCGTGAACTGTCAGCAAACAGTCTCGAAGAGCAGCAGTaGCCCATACATGAGGATGCC +
Preference number: 4 (lower is better)
Translates to: GLPLRAGRKPARELSANSLEEQQ*PIHEDA
Trigger: GGCATCCTCATGTATGGGGCACTGCTGCTCTTCGAG...ACTGTTTGCTGACAGTTCACGGGCTGGTTTCCTCCCTGCTCTAAGAGGGAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CCA 90 bp CCTGCCCAGCTGTGCCGAGGCTGTCACTTCCTCTCAGTAGCTGTTCACGCAGTGGCATTTAGCTCCAAATaGGCTTCTCCCCGACTGGTT +
Preference number: 4 (lower is better)
Translates to: PAQLCRGCHFLSVAVHAVAFSSK*ASPRLV
Trigger: AACCAGTCGGGGAGAAGCCCATTTGGAGCTAAATGC...CACTGCGTGAACAGCTACTGAGAGGAAGTGACAGCCTCGGCACAGCTGGGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
3UTR CAA 72 bp GCGTTGAGGACTGGCTTCTTCTCAGTGGAGCAGAGCTaGGGTTGTGCCCACTTGGCTGTGAGTGTACCTGCA +
Preference number: 4 (lower is better)
Translates to: ALRTGFFSVEQS*GCAHLAVSVPA
Trigger: TGCAGGTACACTCACAGCCAAGTGGGCACAACCCAAGCTCTGCTCCACTGAGAAGAAGCCAGTCCTCAACGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000225205.2
ENSMUST00000225235.2
CDS-3UTR TCA 90 bp CCTGCCCAGCTGTGCCGAGGCTGTCACTTCCTCTCAGTAGCTGTTCACGCAGTGTGCTGGTACAAACTGTaGGCAGGACACTACCAGAAA +
Preference number: 4 (lower is better)
Translates to: PAQLCRGCHFLSVAVHAVCWYKL*AGHYQK
Trigger: TTTCTGGTAGTGTCCTGCTCACAGTTTGTACCAGCA...CACTGCGTGAACAGCTACTGAGAGGAAGTGACAGCCTCGGCACAGCTGGGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
CDS-3UTR TCA 90 bp GGTCCCCGAGGGCTGGCAGCCGTTGTGTGCAGCTCACCGCCACCTTCAGCTTCCTCCAACTTGTATGTCTaGGCTCTTAACTTGAACTTT +
Preference number: 4 (lower is better)
Translates to: GPRGLAAVVCSSPPPSASSNLYV*ALNLNF
Trigger: AAAGTTCAAGTTAAGAGCTCAGACATACAAGTTGGA...GGAAGCTGAAGGTGGCGGTGAGCTGCACACAACGGCTGCCAGCCCTCGGGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000224709.2
CDS-3UTR TCA 90 bp TTCATAGCTGCAACGGAATTAGGACAGCAGTGTCACCGCTTGGCCACCTGGGCTGCTTGCTCTCGGAGGTaGAGGGGAACATCTGTAGGA +
Preference number: 4 (lower is better)
Translates to: FIAATELGQQCHRLATWAACSRR*RGTSVG
Trigger: TCCTACAGATGTTCCCCTTCACCTCCGAGAGCAAGC...AGCCCAGGTGGCCAAGCGGTGACACTGCTGTCCTAATTCCGTTGCAGCTATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR TCA 90 bp TATAAGCACACGGACGAGGACTCCTACTCAGGGAGCAAAGCATTGTGGTTGGTGGGTCCTCCACCCCAGTaGGGCACAACAGCTCCATCT +
Preference number: 4 (lower is better)
Translates to: YKHTDEDSYSGSKALWLVGPPPQ*GTTAPS
Trigger: AGATGGAGCTGTTGTGCCTCACTGGGGTGGAGGACC...CACCAACCACAATGCTTTGCTCCCTGAGTAGGAGTCCTCGTCCGTGTGCTTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CCA 90 bp CACGGACGAGGACTCCTACTCAGGGAGCAAAGCATTGTGGTTGGTGCTGTGGCACTGGCTTCTTCTCAGTaGAGCAGAGCTTGGGTTGTG +
Preference number: 4 (lower is better)
Translates to: HGRGLLLREQSIVVGAVALASSQ*SRAWVV
Trigger: CACAACCCAAGCTCTGCTCCACTGAGAAGAAGCCAG...TGCCACAGCACCAACCACAATGCTTTGCTCCCTGAGTAGGAGTCCTCGTCCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CCA 90 bp GTGCAAAGGAGACTCCCACAGCCTGCTCCCGAGCGTGAAGAGCCGAGGCCAAGACATGGATACTCAGTTTaGCTTGACTGTATCGGCTCT +
Preference number: 4 (lower is better)
Translates to: VQRRLPQPAPEREEPRPRHGYSV*LDCIGS
Trigger: AGAGCCGATACAGTCAAGCCAAACTGAGTATCCATG...TCTTGGCCTCGGCTCTTCACGCTCGGGAGCAGGCTGTGGGAGTCTCCTTTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CCA 90 bp AGGACAGCAGTGTCACCGCTTGGCCACCTGGGCTTGTGTGTGTGGTGTCCGCTGGAGAATCGCCATCTCTaGCTTTACATCTTGGTCCAA +
Preference number: 4 (lower is better)
Translates to: RTAVSPLGHLGLCVWCPLENRHL*LYILVQ
Trigger: TTGGACCAAGATGTAAAGCCAGAGATGGCGATTCTC...CAGCGGACACCACACACACAAGCCCAGGTGGCCAAGCGGTGACACTGCTGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
3UTR CAA 72 bp GACGAGGACTCCTACTCAGGGAGCAAAGCATTGTGGTaGGTGCTGTGGCAGCACAGGACAGCTGAGTTCTAC +
Preference number: 4 (lower is better)
Translates to: DEDSYSGSKALW*VLWQHRTAEFY
Trigger: GTAGAACTCAGCTGTCCTGTGCTGCCACAGCACCAACCACAATGCTTTGCTCCCTGAGTAGGAGTCCTCGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
CDS-3UTR TCA 90 bp GTGCAAAGGAGACTCCCACAGCCTGCTCCCGAGCGTGAAGAGCCGAGGCCAAGAGTTCCTTCAAAGCTATaGATATCCAGTTGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: VQRRLPQPAPEREEPRPRVPSKL*ISSCGF
Trigger: GAAGCCACAACTGGATATTCATAGCTTTGAAGGAAC...TCTTGGCCTCGGCTCTTCACGCTCGGGAGCAGGCTGTGGGAGTCTCCTTTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
CDS-3UTR TCA 90 bp AGGACAGCAGTGTCACCGCTTGGCCACCTGGGCTTGTGTGTGTGGTGTCCGCTGGACTGGTTACTGGTCTaGAAACATGAATGTCTTGTG +
Preference number: 4 (lower is better)
Translates to: RTAVSPLGHLGLCVWCPLDWLLV*KHECLV
Trigger: CACAAGACATTCATGTTTTCAGACCAGTAACCAGTC...CAGCGGACACCACACACACAAGCCCAGGTGGCCAAGCGGTGACACTGCTGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR TCA 90 bp GGGGCTAACTCTAAGGCCAGAATTCCTCTAAAGAGCTCCCATGAGCCCTCAGTGGGGATCTTCCCTTGGTaGGGTCCTTGTACAGCTCTG +
Preference number: 4 (lower is better)
Translates to: GANSKARIPLKSSHEPSVGIFPW*GPCTAL
Trigger: CAGAGCTGTACAAGGACCTCACCAAGGGAAGATCCC...CACTGAGGGCTCATGGGAGCTCTTTAGAGGAATTCTGGCCTTAGAGTTAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR GCA 90 bp TTCTGCAGTTCACCACCGCAGAAATTACACTTCTGGCGCTCAGGAGCGAAGCCTCTGGGGGTCTTCAGCTaGATGGAAGCAAGATCCCTG +
Preference number: 4 (lower is better)
Translates to: FCSSPPQKLHFWRSGAKPLGVFS*MEARSL
Trigger: CAGGGATCTTGCTTCCATGCAGCTGAAGACCCCCAG...AGGCTTCGCTCCTGAGCGCCAGAAGTGTAATTTCTGCGGTGGTGAACTGCAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CCA 90 bp AGTCTGATCAGGAATGGCTTTCTGCAGTTCACCACCGCAGAAATTACACTTCTGGACTCATCCTCCAGCTaGTACCTGCCGCGCCGGTCG +
Preference number: 4 (lower is better)
Translates to: SLIRNGFLQFTTAEITLLDSSSS*YLPRRS
Trigger: CGACCGGCGCGGCAGGTACCAGCTGGAGGATGAGTC...CAGAAGTGTAATTTCTGCGGTGGTGAACTGCAGAAAGCCATTCCTGATCAGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
CDS-3UTR CCA 90 bp AGGACAGCAGTGTCACCGCTTGGCCACCTGGGCTTGTGTGTGTGGTGTCCGCTGTTCAGACATCATCAGTaGCATTTCATCCAAATGGGC +
Preference number: 4 (lower is better)
Translates to: RTAVSPLGHLGLCVWCPLFRHHQ*HFIQMG
Trigger: GCCCATTTGGATGAAATGCCACTGATGATGTCTGAA...CAGCGGACACCACACACACAAGCCCAGGTGGCCAAGCGGTGACACTGCTGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
CDS-3UTR CCA 90 bp CACTCAGTCTACACCCTGACCCTGGCACTGTGGCCTTGGCTCATAGCCTTCTGGGCCAATCACAGCAACTaGTACAGAGGAACTTCCATC +
Preference number: 4 (lower is better)
Translates to: HSVYTLTLALWPWLIAFWANHSN*YRGTSI
Trigger: GATGGAAGTTCCTCTGTACCAGTTGCTGTGATTGGC...CCAGAAGGCTATGAGCCAAGGCCACAGTGCCAGGGTCAGGGTGTAGACTGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CCA 90 bp ACTCCTACTCAGGGAGCAAAGCATTGTGGTTGGTGCTGTGGCAGCACAGGACAGCTGTCAGAGTCCTCTTaGCTACCACAAGGGTTCGCA +
Preference number: 4 (lower is better)
Translates to: TPTQGAKHCGWCCGSTGQLSESS*LPQGFA
Trigger: TGCGAACCCTTGTGGTAGCCAAGAGGACTCTGACAG...CTGTCCTGTGCTGCCACAGCACCAACCACAATGCTTTGCTCCCTGAGTAGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CCA 90 bp GAGGACTCCTACTCAGGGAGCAAAGCATTGTGGTTGGTGCTGTGGCAGCACAGGGTCCTTGTACAGCTCTaGGTAGAGAATCGCCATCTC +
Preference number: 4 (lower is better)
Translates to: EDSYSGSKALWLVLWQHRVLVQL*VENRHL
Trigger: GAGATGGCGATTCTCTACCCAGAGCTGTACAAGGAC...CCTGTGCTGCCACAGCACCAACCACAATGCTTTGCTCCCTGAGTAGGAGTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
3UTR CAA 72 bp ATTAGGACAGCAGTGTCACCGCTTGGCCACCTGGGCTaGTGTGTGTGGTGTCCGCTGAAAAGCAAAACTGCA +
Preference number: 4 (lower is better)
Translates to: IRTAVSPLGHLG*CVWCPLKSKTA
Trigger: TGCAGTTTTGCTTTTCAGCGGACACCACACACACAAGCCCAGGTGGCCAAGCGGTGACACTGCTGTCCTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
3UTR CAA 72 bp TCAAAATCCTGGTATTGCTCTTCTGTCAGAGTCCTCTaGGCTACCACAAGGGTTCGCAGGCCCTCTCGTGCC +
Preference number: 4 (lower is better)
Translates to: SKSWYCSSVRVL*ATTRVRRPSRA
Trigger: GGCACGAGAGGGCCTGCGAACCCTTGTGGTAGCCAAGAGGACTCTGACAGAAGAGCAATACCAGGATTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225235.2
CDS-3UTR TCA 90 bp CACTCAGTCTACACCCTGACCCTGGCACTGTGGCCTTGGCTCATAGCCTTCTGGCCTTTGTCAGCTGATTaGGTTCGAGGTCCAATAAAC +
Preference number: 4 (lower is better)
Translates to: HSVYTLTLALWPWLIAFWPLSAD*VRGPIN
Trigger: GTTTATTGGACCTCGAACTCAATCAGCTGACAAAGG...CCAGAAGGCTATGAGCCAAGGCCACAGTGCCAGGGTCAGGGTGTAGACTGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR GCA 90 bp TGTGACAGGAACACGCTGTACAGTGCAGAGCTGCACGCACAACTCCTGGGGCTAGAAGAAAACACAGCCTaGATGGTGGAGATGATGAGG +
Preference number: 4 (lower is better)
Translates to: CDRNTLYSAELHAQLLGLEENTA*MVEMMR
Trigger: CCTCATCATCTCCACCATGCAGGCTGTGTTTTCTTC...TAGCCCCAGGAGTTGTGCGTGCAGCTCTGCACTGTACAGCGTGTTCCTGTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR GCA 90 bp AGGACAGCAGTGTCACCGCTTGGCCACCTGGGCTTGTGTGTGTGGTGTCCGCTGCGCCAAAAGACACTCTaGCTATACCAAAATACTCAT +
Preference number: 4 (lower is better)
Translates to: RTAVSPLGHLGLCVWCPLRQKTL*LYQNTH
Trigger: ATGAGTATTTTGGTATAGGCAGAGTGTCTTTTGGCG...CAGCGGACACCACACACACAAGCCCAGGTGGCCAAGCGGTGACACTGCTGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091790.5
CDS-3UTR CCA 90 bp GAGGACTCCTACTCAGGGAGCAAAGCATTGTGGTTGGTGCTGTGGCAGCACAGGGCCAATCACAGCAACTaGTACAGAGGAACTTCCATC +
Preference number: 4 (lower is better)
Translates to: EDSYSGSKALWLVLWQHRANHSN*YRGTSI
Trigger: GATGGAAGTTCCTCTGTACCAGTTGCTGTGATTGGC...CCTGTGCTGCCACAGCACCAACCACAATGCTTTGCTCCCTGAGTAGGAGTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
CDS-3UTR CCA 90 bp TTAGCTTCCTGTGTGTTCCTTTCTACCCAGCATACAGGAGGAGTGAGTGACCAGCAGTGGAGCAGAGCTTaGGTTGTGCCCACTTGGCTG +
Preference number: 4 (lower is better)
Translates to: LASCVFLSTQHTGGVSDQQWSRA*VVPTWL
Trigger: CAGCCAAGTGGGCACAACCCAAGCTCTGCTCCACTG...CTGGTCACTCACTCCTCCTGTATGCTGGGTAGAAAGGAACACACAGGAAGCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CCA 90 bp GTGCAAAGGAGACTCCCACAGCCTGCTCCCGAGCGTGAAGAGCCGAGGCCAAGATCATCACTAAAGTCTTaGTCTGCTTCAGCAAACTCA +
Preference number: 4 (lower is better)
Translates to: VQRRLPQPAPEREEPRPRSSLKS*SASANS
Trigger: TGAGTTTGCTGAAGCAGACCAAGACTTTAGTGATGA...TCTTGGCCTCGGCTCTTCACGCTCGGGAGCAGGCTGTGGGAGTCTCCTTTGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CCA 90 bp CACTCAGTCTACACCCTGACCCTGGCACTGTGGCCTTGGCTCATAGCCTTCTGGCATGGATACTCAGTTTaGCTTGACTGTATCGGCTCT +
Preference number: 4 (lower is better)
Translates to: HSVYTLTLALWPWLIAFWHGYSV*LDCIGS
Trigger: AGAGCCGATACAGTCAAGCCAAACTGAGTATCCATG...CCAGAAGGCTATGAGCCAAGGCCACAGTGCCAGGGTCAGGGTGTAGACTGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CCA 90 bp GGGGCTAACTCTAAGGCCAGAATTCCTCTAAAGAGCTCCCATGAGCCCTCAGTGCTGTGCATGACAAACTaGCCAAGTGCTGCAGACCGT +
Preference number: 4 (lower is better)
Translates to: GANSKARIPLKSSHEPSVLCMTN*PSAADR
Trigger: ACGGTCTGCAGCACTTGGCCAGTTTGTCATGCACAG...CACTGAGGGCTCATGGGAGCTCTTTAGAGGAATTCTGGCCTTAGAGTTAGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
3UTR CAA 72 bp TTCTTCTCAGTGGAGCAGAGCTTGGGTTGTGCCCACTaGGCTGTGAGTGTACCTGCAGGTAGGAATTCAGGA +
Preference number: 4 (lower is better)
Translates to: FFSVEQSLGCAH*AVSVPAGRNSG
Trigger: TCCTGAATTCCTACCTGCAGGTACACTCACAGCCAAGTGGGCACAACCCAAGCTCTGCTCCACTGAGAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000225205.2
ENSMUST00000225235.2
CDS-3UTR TCA 90 bp CCTGCCCAGCTGTGCCGAGGCTGTCACTTCCTCTCAGTAGCTGTTCACGCAGTGATTTCCTTGTCTCGCTaGAAACGTCGAAATTCATCA +
Preference number: 4 (lower is better)
Translates to: PAQLCRGCHFLSVAVHAVISLSR*KRRNSS
Trigger: TGATGAATTTCGACGTTTTCAGCGAGACAAGGAAAT...CACTGCGTGAACAGCTACTGAGAGGAAGTGACAGCCTCGGCACAGCTGGGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
CDS-3UTR TCA 90 bp CTGGTTGCAGTTTCGTCTGTCAGGGGAATATGCTCACAGGTTGCTAAGAACAAAACTCAGTCTCCCCAGTaGTGCCAGCCCGAGCCTCAT +
Preference number: 4 (lower is better)
Translates to: LVAVSSVRGICSQVAKNKTQSPQ*CQPEPH
Trigger: ATGAGGCTCGGGCTGGCATCACTGGGGAGACTGAGT...TTTGTTCTTAGCAACCTGTGAGCATATTCCCCTGACAGACGAAACTGCAACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR TCA 90 bp AGTCTGATCAGGAATGGCTTTCTGCAGTTCACCACCGCAGAAATTACACTTCTGGGTCCTCCACCCCAGTaGGGCACAACAGCTCCATCT +
Preference number: 4 (lower is better)
Translates to: SLIRNGFLQFTTAEITLLGPPPQ*GTTAPS
Trigger: AGATGGAGCTGTTGTGCCTCACTGGGGTGGAGGACC...CAGAAGTGTAATTTCTGCGGTGGTGAACTGCAGAAAGCCATTCCTGATCAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR TCA 90 bp CTCTGGAGCCAAGAAGCTCTAGAATTTAAAACTACACCCACAAGGTTGTCTCAGTCCGTCCGTGCACCATaGGCAGCCTGCCGATGTGTC +
Preference number: 4 (lower is better)
Translates to: LWSQEALEFKTTPTRLSQSVRAP*AACRCV
Trigger: GACACATCGGCAGGCTGCTCATGGTGCACGGACGGA...CTGAGACAACCTTGTGGGTGTAGTTTTAAATTCTAGAGCTTCTTGGCTCCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091790.5
CDS-3UTR TCA 90 bp GGGGCTAACTCTAAGGCCAGAATTCCTCTAAAGAGCTCCCATGAGCCCTCAGTGGACCACAGTGATGGCTaGCACTTTCCACAAGAAGGT +
Preference number: 4 (lower is better)
Translates to: GANSKARIPLKSSHEPSVDHSDG*HFPQEG
Trigger: ACCTTCTTGTGGAAAGTGTCAGCCATCACTGTGGTC...CACTGAGGGCTCATGGGAGCTCTTTAGAGGAATTCTGGCCTTAGAGTTAGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR GCA 90 bp GGGCTCCCTCTTAGAGCAGGGAGGAAACCAGCCCGTGAACTGTCAGCAAACAGTGGCAATGGCTTTCACTaGTTCATGGATTCTACTGCT +
Preference number: 4 (lower is better)
Translates to: GLPLRAGRKPARELSANSGNGFH*FMDSTA
Trigger: AGCAGTAGAATCCATGAAGCAGTGAAAGCCATTGCC...ACTGTTTGCTGACAGTTCACGGGCTGGTTTCCTCCCTGCTCTAAGAGGGAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR GCA 90 bp TGTGACAGGAACACGCTGTACAGTGCAGAGCTGCACGCACAACTCCTGGGGCTAGACAATGGTGGACATTaGGACATCAGCACCTTTCAT +
Preference number: 4 (lower is better)
Translates to: CDRNTLYSAELHAQLLGLDNGGH*DISTFH
Trigger: ATGAAAGGTGCTGATGTCGCAATGTCCACCATTGTC...TAGCCCCAGGAGTTGTGCGTGCAGCTCTGCACTGTACAGCGTGTTCCTGTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR GCA 90 bp TGCAGAGCTGCACGCACAACTCCTGGGGCTAACTCTAAGGCCAGAATTCCTCTACCAGAGAAGCCTGTTTaGCCTCCTTTCCTTCAATCC +
Preference number: 4 (lower is better)
Translates to: CRAARTTPGANSKARIPLPEKPV*PPFLQS
Trigger: GGATTGAAGGAAAGGAGGGCAAACAGGCTTCTCTGG...TAGAGGAATTCTGGCCTTAGAGTTAGCCCCAGGAGTTGTGCGTGCAGCTCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CCA 90 bp CACGGACGAGGACTCCTACTCAGGGAGCAAAGCATTGTGGTTGGTGCTGTGGCACTCTTCACACTTCTCTaGACATCCAAGCCATACTGT +
Preference number: 4 (lower is better)
Translates to: HGRGLLLREQSIVVGAVALFTLL*TSKPYC
Trigger: ACAGTATGGCTTGGATGTCCAGAGAAGTGTGAAGAG...TGCCACAGCACCAACCACAATGCTTTGCTCCCTGAGTAGGAGTCCTCGTCCGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
CDS-3UTR CCA 90 bp TATAAGCACACGGACGAGGACTCCTACTCAGGGAGCAAAGCATTGTGGTTGGTGCTGGCTTCTTCTCAGTaGAGCAGAGCTTGGGTTGTG +
Preference number: 4 (lower is better)
Translates to: YKHTDEDSYSGSKALWLVLASSQ*SRAWVV
Trigger: CACAACCCAAGCTCTGCTCCACTGAGAAGAAGCCAG...CACCAACCACAATGCTTTGCTCCCTGAGTAGGAGTCCTCGTCCGTGTGCTTATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CCA 90 bp TGTGACAGGAACACGCTGTACAGTGCAGAGCTGCACGCACAACTCCTGGGGCTATCCCCGACTGGTTACTaGTCTGAAAACATGAATGTC +
Preference number: 4 (lower is better)
Translates to: CDRNTLYSAELHAQLLGLSPTGY*SENMNV
Trigger: GACATTCATGTTTTCAGACCAGTAACCAGTCGGGGA...TAGCCCCAGGAGTTGTGCGTGCAGCTCTGCACTGTACAGCGTGTTCCTGTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR TCA 90 bp CACCAGGCGTCCAAGTTCTTCTGGTATTGTGCTGGTCCGAACAACTGTACCAGGATGCTGAGACTCTCATaGATGGGAGGATCACTGTCT +
Preference number: 4 (lower is better)
Translates to: HQASKFFWYCAGPNNCTRMLRLS*MGGSLS
Trigger: AGACAGTGATCCTCCCATTCATGAGAGTCTCAGCAT...CCTGGTACAGTTGTTCGGACCAGCACAATACCAGAAGAACTTGGACGCCTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000223926.2
ENSMUST00000225205.2
ENSMUST00000225235.2
CDS-3UTR TCA 90 bp TTCATAGCTGCAACGGAATTAGGACAGCAGTGTCACCGCTTGGCCACCTGGGCTCCTTTGTCAGCTGATTaGGTTCGAGGTCCAATAAAC +
Preference number: 4 (lower is better)
Translates to: FIAATELGQQCHRLATWAPLSAD*VRGPIN
Trigger: GTTTATTGGACCTCGAACTCAATCAGCTGACAAAGG...AGCCCAGGTGGCCAAGCGGTGACACTGCTGTCCTAATTCCGTTGCAGCTATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
CDS-3UTR GCA 90 bp TTCTGCAGTTCACCACCGCAGAAATTACACTTCTGGCGCTCAGGAGCGAAGCCTGAAGAAAACACAGCCTaGATGGTGGAGATGATGAGG +
Preference number: 4 (lower is better)
Translates to: FCSSPPQKLHFWRSGAKPEENTA*MVEMMR
Trigger: CCTCATCATCTCCACCATGCAGGCTGTGTTTTCTTC...AGGCTTCGCTCCTGAGCGCCAGAAGTGTAATTTCTGCGGTGGTGAACTGCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CCA 90 bp CACGGACGAGGACTCCTACTCAGGGAGCAAAGCATTGTGGTTGGTGCTGTGGCATTCAGACATCATCAGTaGCATTTCATCCAAATGGGC +
Preference number: 4 (lower is better)
Translates to: HGRGLLLREQSIVVGAVAFRHHQ*HFIQMG
Trigger: GCCCATTTGGATGAAATGCCACTGATGATGTCTGAA...TGCCACAGCACCAACCACAATGCTTTGCTCCCTGAGTAGGAGTCCTCGTCCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
CDS-3UTR CCA 90 bp GGGCTCCCTCTTAGAGCAGGGAGGAAACCAGCCCGTGAACTGTCAGCAAACAGTTTCAGACATCATCAGTaGCATTTCATCCAAATGGGC +
Preference number: 4 (lower is better)
Translates to: GLPLRAGRKPARELSANSFRHHQ*HFIQMG
Trigger: GCCCATTTGGATGAAATGCCACTGATGATGTCTGAA...ACTGTTTGCTGACAGTTCACGGGCTGGTTTCCTCCCTGCTCTAAGAGGGAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CCA 90 bp TTCTGCAGTTCACCACCGCAGAAATTACACTTCTGGCGCTCAGGAGCGAAGCCTCTTCTGGTATTGTGCTaGTCCGAACAACTGTACCAG +
Preference number: 4 (lower is better)
Translates to: FCSSPPQKLHFWRSGAKPLLVLC*SEQLYQ
Trigger: CTGGTACAGTTGTTCGGACCAGCACAATACCAGAAG...AGGCTTCGCTCCTGAGCGCCAGAAGTGTAATTTCTGCGGTGGTGAACTGCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CCA 90 bp CTGGTTGCAGTTTCGTCTGTCAGGGGAATATGCTCACAGGTTGCTAAGAACAAACAGTGGAGCAGAGCTTaGGTTGTGCCCACTTGGCTG +
Preference number: 4 (lower is better)
Translates to: LVAVSSVRGICSQVAKNKQWSRA*VVPTWL
Trigger: CAGCCAAGTGGGCACAACCCAAGCTCTGCTCCACTG...TTTGTTCTTAGCAACCTGTGAGCATATTCCCCTGACAGACGAAACTGCAACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR TCA 90 bp TATAAGCACACGGACGAGGACTCCTACTCAGGGAGCAAAGCATTGTGGTTGGTGATGCTGAGACTCTCATaGATGGGAGGATCACTGTCT +
Preference number: 4 (lower is better)
Translates to: YKHTDEDSYSGSKALWLVMLRLS*MGGSLS
Trigger: AGACAGTGATCCTCCCATTCATGAGAGTCTCAGCAT...CACCAACCACAATGCTTTGCTCCCTGAGTAGGAGTCCTCGTCCGTGTGCTTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
CDS-3UTR TCA 90 bp TCACTAAAGTCTTGGTCTGCTTCAGCAAACTCAGTCTCCCCAGTGATGCCAGCCATGCTGAGACTCTCATaGATGGGAGGATCACTGTCT +
Preference number: 4 (lower is better)
Translates to: SLKSWSASANSVSPVMPAMLRLS*MGGSLS
Trigger: AGACAGTGATCCTCCCATTCATGAGAGTCTCAGCAT...GGCTGGCATCACTGGGGAGACTGAGTTTGCTGAAGCAGACCAAGACTTTAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000225205.2
ENSMUST00000225235.2
CDS-3UTR TCA 90 bp ACACCAGGCGTCCAAGTTCTTCTGGTATTGTGCTGGTCCGAACAACTGTACCAGATGCTGAGACTCTCATaGATGGGAGGATCACTGTCT +
Preference number: 4 (lower is better)
Translates to: TPGVQVLLVLCWSEQLYQMLRLS*MGGSLS
Trigger: AGACAGTGATCCTCCCATTCATGAGAGTCTCAGCAT...CTGGTACAGTTGTTCGGACCAGCACAATACCAGAAGAACTTGGACGCCTGGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000223926.2
ENSMUST00000225205.2
ENSMUST00000225235.2
CDS-3UTR TCA 90 bp ACACCAGGCGTCCAAGTTCTTCTGGTATTGTGCTGGTCCGAACAACTGTACCAGGAGTGTTCTCTATGCTaGGACTCTCATGAATGGGAG +
Preference number: 4 (lower is better)
Translates to: TPGVQVLLVLCWSEQLYQECSLC*DSHEWE
Trigger: CTCCCATTCATGAGAGTCTCAGCATAGAGAACACTC...CTGGTACAGTTGTTCGGACCAGCACAATACCAGAAGAACTTGGACGCCTGGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000223926.2
ENSMUST00000225205.2
ENSMUST00000225235.2
CDS-3UTR TCA 90 bp CACCAGGCGTCCAAGTTCTTCTGGTATTGTGCTGGTCCGAACAACTGTACCAGGCCTTTGTCAGCTGATTaGGTTCGAGGTCCAATAAAC +
Preference number: 4 (lower is better)
Translates to: HQASKFFWYCAGPNNCTRPLSAD*VRGPIN
Trigger: GTTTATTGGACCTCGAACTCAATCAGCTGACAAAGG...CCTGGTACAGTTGTTCGGACCAGCACAATACCAGAAGAACTTGGACGCCTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000225205.2
ENSMUST00000225235.2
CDS-3UTR TCA 90 bp GGGGCTAACTCTAAGGCCAGAATTCCTCTAAAGAGCTCCCATGAGCCCTCAGTGTCTGGACACCAAGTGTaGGCTTTTGGCAATACAAGT +
Preference number: 4 (lower is better)
Translates to: GANSKARIPLKSSHEPSVSGHQV*AFGNTS
Trigger: ACTTGTATTGCCAAAAGCTCACACTTGGTGTCCAGA...CACTGAGGGCTCATGGGAGCTCTTTAGAGGAATTCTGGCCTTAGAGTTAGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR GCA 90 bp TTCTGCAGTTCACCACCGCAGAAATTACACTTCTGGCGCTCAGGAGCGAAGCCTGACAATGGTGGACATTaGGACATCAGCACCTTTCAT +
Preference number: 4 (lower is better)
Translates to: FCSSPPQKLHFWRSGAKPDNGGH*DISTFH
Trigger: ATGAAAGGTGCTGATGTCGCAATGTCCACCATTGTC...AGGCTTCGCTCCTGAGCGCCAGAAGTGTAATTTCTGCGGTGGTGAACTGCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR GCA 90 bp TTCTGCAGTTCACCACCGCAGAAATTACACTTCTGGCGCTCAGGAGCGAAGCCTCCCAGATATAACCAGTaGACAGTCATGCTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: FCSSPPQKLHFWRSGAKPPRYNQ*TVMLPS
Trigger: AGAAGGAAGCATGACTGTGCACTGGTTATATCTGGG...AGGCTTCGCTCCTGAGCGCCAGAAGTGTAATTTCTGCGGTGGTGAACTGCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR GCA 90 bp AAACTGCATCTGAAGAGGACGAGTTACCCACTGTCTCCTGAGGTGCAATGGCATCCAGAGAAGCCTGTTTaGCCTCCTTTCCTTCAATCC +
Preference number: 4 (lower is better)
Translates to: KLHLKRTSYPLSPEVQWHPEKPV*PPFLQS
Trigger: GGATTGAAGGAAAGGAGGGCAAACAGGCTTCTCTGG...ATGCCATTGCACCTCAGGAGACAGTGGGTAACTCGTCCTCTTCAGATGCAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CCA 90 bp ATTGTGCTGGTCCGAACAACTGTACCAGGAATATTCTCATCTTTCATAATCATCGACTCATCCTCCAGCTaGTACCTGCCGCGCCGGTCG +
Preference number: 4 (lower is better)
Translates to: IVLVRTTVPGIFSSFIIIDSSSS*YLPRRS
Trigger: CGACCGGCGCGGCAGGTACCAGCTGGAGGATGAGTC...GATGATTATGAAAGATGAGAATATTCCTGGTACAGTTGTTCGGACCAGCACAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000225205.2
ENSMUST00000225235.2
CDS-3UTR CCA 90 bp GGGGCTAACTCTAAGGCCAGAATTCCTCTAAAGAGCTCCCATGAGCCCTCAGTGCTCTTCACACTTCTCTaGACATCCAAGCCATACTGT +
Preference number: 4 (lower is better)
Translates to: GANSKARIPLKSSHEPSVLFTLL*TSKPYC
Trigger: ACAGTATGGCTTGGATGTCCAGAGAAGTGTGAAGAG...CACTGAGGGCTCATGGGAGCTCTTTAGAGGAATTCTGGCCTTAGAGTTAGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
CDS-3UTR CCA 90 bp AAGGCCAGAATTCCTCTAAAGAGCTCCCATGAGCCCTCAGTGCAGCCTTCGACAAGCCAATCATTGTACTaGACAATGGTGGACATTGCG +
Preference number: 4 (lower is better)
Translates to: KARIPLKSSHEPSVQPSTSQSLY*TMVDIA
Trigger: CGCAATGTCCACCATTGTCCAGTACAATGATTGGCT...TGTCGAAGGCTGCACTGAGGGCTCATGGGAGCTCTTTAGAGGAATTCTGGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CCA 90 bp AAGGCCAGAATTCCTCTAAAGAGCTCCCATGAGCCCTCAGTGCAGCCTTCGACAGAGAATCGCCATCTCTaGCTTTACATCTTGGTCCAA +
Preference number: 4 (lower is better)
Translates to: KARIPLKSSHEPSVQPSTENRHL*LYILVQ
Trigger: TTGGACCAAGATGTAAAGCCAGAGATGGCGATTCTC...TGTCGAAGGCTGCACTGAGGGCTCATGGGAGCTCTTTAGAGGAATTCTGGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
3UTR CAA 72 bp ACACCGTGTGGAGAATGGGAGAAACAGCTTTTCTGGTaGCAGTTTCGTCTGTCAGGGGAATATGCTCACAGG +
Preference number: 4 (lower is better)
Translates to: TPCGEWEKQLFW*QFRLSGEYAHR
Trigger: CCTGTGAGCATATTCCCCTGACAGACGAAACTGCAACCAGAAAAGCTGTTTCTCCCATTCTCCACACGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
3UTR CAA 72 bp TTATCGCCTGTTAGCATCCAAATCTTGATCCCTGCATaGCGCAGCATCTCTAGTGTGGGCCTCACATCAGCT +
Preference number: 4 (lower is better)
Translates to: LSPVSIQILIPA*RSISSVGLTSA
Trigger: AGCTGATGTGAGGCCCACACTAGAGATGCTGCGCAATGCAGGGATCAAGATTTGGATGCTAACAGGCGATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225235.2
CDS-3UTR TCA 90 bp GTCCATAGTGTCCGTTCCGTAGGAGACAGTGCCCAGATGGAGCCGCTTAAATACGTTCCTTCAAAGCTATaGATATCCAGTTGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: VHSVRSVGDSAQMEPLKYVPSKL*ISSCGF
Trigger: GAAGCCACAACTGGATATTCATAGCTTTGAAGGAAC...GTATTTAAGCGGCTCCATCTGGGCACTGTCTCCTACGGAACGGACACTATGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000223926.2
ENSMUST00000225205.2
ENSMUST00000225235.2
CDS-3UTR TCA 90 bp GGGGCTAACTCTAAGGCCAGAATTCCTCTAAAGAGCTCCCATGAGCCCTCAGTGGTTCCTTCAAAGCTATaGATATCCAGTTGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: GANSKARIPLKSSHEPSVVPSKL*ISSCGF
Trigger: GAAGCCACAACTGGATATTCATAGCTTTGAAGGAAC...CACTGAGGGCTCATGGGAGCTCTTTAGAGGAATTCTGGCCTTAGAGTTAGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
CDS-3UTR TCA 90 bp GTAAGTACACCAGGCGTCCAAGTTCTTCTGGTATTGTGCTGGTCCGAACAACTGGAGTGTTCTCTATGCTaGGACTCTCATGAATGGGAG +
Preference number: 4 (lower is better)
Translates to: VSTPGVQVLLVLCWSEQLECSLC*DSHEWE
Trigger: CTCCCATTCATGAGAGTCTCAGCATAGAGAACACTC...CAGTTGTTCGGACCAGCACAATACCAGAAGAACTTGGACGCCTGGTGTACTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000223926.2
ENSMUST00000225205.2
ENSMUST00000225235.2
CDS-3UTR TCA 90 bp GGGGCTAACTCTAAGGCCAGAATTCCTCTAAAGAGCTCCCATGAGCCCTCAGTGAATACCATTTCATTCTaGGTGAGCGTCCCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: GANSKARIPLKSSHEPSVNTISF*VSVPVL
Trigger: CAAAACAGGGACGCTCACTCAGAATGAAATGGTATT...CACTGAGGGCTCATGGGAGCTCTTTAGAGGAATTCTGGCCTTAGAGTTAGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR TCA 90 bp TATAAGCACACGGACGAGGACTCCTACTCAGGGAGCAAAGCATTGTGGTTGGTGTCTGGACACCAAGTGTaGGCTTTTGGCAATACAAGT +
Preference number: 4 (lower is better)
Translates to: YKHTDEDSYSGSKALWLVSGHQV*AFGNTS
Trigger: ACTTGTATTGCCAAAAGCTCACACTTGGTGTCCAGA...CACCAACCACAATGCTTTGCTCCCTGAGTAGGAGTCCTCGTCCGTGTGCTTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR GCA 90 bp ACAGTGACACCGTGTGGAGAATGGGAGAAACAGCTTTTCTGGTTGCAGTTTCGTATGATGAGGCCCCTGTaGATGACAAACTGGCCAAGT +
Preference number: 4 (lower is better)
Translates to: TVTPCGEWEKQLFWLQFRMMRPL*MTNWPS
Trigger: ACTTGGCCAGTTTGTCATGCACAGGGGCCTCATCAT...ACGAAACTGCAACCAGAAAAGCTGTTTCTCCCATTCTCCACACGGTGTCACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CCA 90 bp ACTCCTACTCAGGGAGCAAAGCATTGTGGTTGGTGCTGTGGCAGCACAGGACAGTCATCACTAAAGTCTTaGTCTGCTTCAGCAAACTCA +
Preference number: 4 (lower is better)
Translates to: TPTQGAKHCGWCCGSTGQSSLKS*SASANS
Trigger: TGAGTTTGCTGAAGCAGACCAAGACTTTAGTGATGA...CTGTCCTGTGCTGCCACAGCACCAACCACAATGCTTTGCTCCCTGAGTAGGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CCA 90 bp ACAGTGACACCGTGTGGAGAATGGGAGAAACAGCTTTTCTGGTTGCAGTTTCGTGCATTTAGCTCCAAATaGGCTTCTCCCCGACTGGTT +
Preference number: 4 (lower is better)
Translates to: TVTPCGEWEKQLFWLQFRAFSSK*ASPRLV
Trigger: AACCAGTCGGGGAGAAGCCCATTTGGAGCTAAATGC...ACGAAACTGCAACCAGAAAAGCTGTTTCTCCCATTCTCCACACGGTGTCACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
3UTR CAA 72 bp GACTTTCAGAGCCCGGTCATGGATACTCAGTTTGGCTaGACTGTATCGGCTCTCAAAATCCTGGTATTGCTC +
Preference number: 4 (lower is better)
Translates to: DFQSPVMDTQFG*TVSALKILVLL
Trigger: GAGCAATACCAGGATTTTGAGAGCCGATACAGTCAAGCCAAACTGAGTATCCATGACCGGGCTCTGAAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225235.2
CDS-3UTR TCA 90 bp GGGGCTAACTCTAAGGCCAGAATTCCTCTAAAGAGCTCCCATGAGCCCTCAGTGATTTCCTTGTCTCGCTaGAAACGTCGAAATTCATCA +
Preference number: 4 (lower is better)
Translates to: GANSKARIPLKSSHEPSVISLSR*KRRNSS
Trigger: TGATGAATTTCGACGTTTTCAGCGAGACAAGGAAAT...CACTGAGGGCTCATGGGAGCTCTTTAGAGGAATTCTGGCCTTAGAGTTAGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
CDS-3UTR TCA 90 bp CAATGGCATGTGCAGGCATGGCCCCTGCAGTCTGATCAGGAATGGCTTTCTGCATCCAACTTGTATGTCTaGGCTCTTAACTTGAACTTT +
Preference number: 4 (lower is better)
Translates to: QWHVQAWPLQSDQEWLSASNLYV*ALNLNF
Trigger: AAAGTTCAAGTTAAGAGCTCAGACATACAAGTTGGA...TGCAGAAAGCCATTCCTGATCAGACTGCAGGGGCCATGCCTGCACATGCCATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
CDS-3UTR TCA 90 bp ACACCAGGCGTCCAAGTTCTTCTGGTATTGTGCTGGTCCGAACAACTGTACCAGGTTCCTTCAAAGCTATaGATATCCAGTTGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: TPGVQVLLVLCWSEQLYQVPSKL*ISSCGF
Trigger: GAAGCCACAACTGGATATTCATAGCTTTGAAGGAAC...CTGGTACAGTTGTTCGGACCAGCACAATACCAGAAGAACTTGGACGCCTGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000223926.2
ENSMUST00000225205.2
ENSMUST00000225235.2
CDS-3UTR TCA 90 bp AGTCTGATCAGGAATGGCTTTCTGCAGTTCACCACCGCAGAAATTACACTTCTGGACCACAGTGATGGCTaGCACTTTCCACAAGAAGGT +
Preference number: 4 (lower is better)
Translates to: SLIRNGFLQFTTAEITLLDHSDG*HFPQEG
Trigger: ACCTTCTTGTGGAAAGTGTCAGCCATCACTGTGGTC...CAGAAGTGTAATTTCTGCGGTGGTGAACTGCAGAAAGCCATTCCTGATCAGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR GCA 90 bp CTTGTGAGGCTTTCTATAACTCTTGACAAGCATGCTGTTAGCTTCCTGTGTGTTCTGGGGGTCTTCAGCTaGATGGAAGCAAGATCCCTG +
Preference number: 4 (lower is better)
Translates to: LVRLSITLDKHAVSFLCVLGVFS*MEARSL
Trigger: CAGGGATCTTGCTTCCATGCAGCTGAAGACCCCCAG...AACACACAGGAAGCTAACAGCATGCTTGTCAAGAGTTATAGAAAGCCTCACAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR GCA 90 bp TTAGCTTCCTGTGTGTTCCTTTCTACCCAGCATACAGGAGGAGTGAGTGACCAGCCCAGATATAACCAGTaGACAGTCATGCTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LASCVFLSTQHTGGVSDQPRYNQ*TVMLPS
Trigger: AGAAGGAAGCATGACTGTGCACTGGTTATATCTGGG...CTGGTCACTCACTCCTCCTGTATGCTGGGTAGAAAGGAACACACAGGAAGCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CCA 90 bp ACACCAGGCGTCCAAGTTCTTCTGGTATTGTGCTGGTCCGAACAACTGTACCAGTTCAGACATCATCAGTaGCATTTCATCCAAATGGGC +
Preference number: 4 (lower is better)
Translates to: TPGVQVLLVLCWSEQLYQFRHHQ*HFIQMG
Trigger: GCCCATTTGGATGAAATGCCACTGATGATGTCTGAA...CTGGTACAGTTGTTCGGACCAGCACAATACCAGAAGAACTTGGACGCCTGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000225205.2
ENSMUST00000225235.2
CDS-3UTR CCA 90 bp TGTGACAGGAACACGCTGTACAGTGCAGAGCTGCACGCACAACTCCTGGGGCTATCTGATGGAATTCTTTaGTTCTTTTCCACTATGATG +
Preference number: 4 (lower is better)
Translates to: CDRNTLYSAELHAQLLGLSDGIL*FFSTMM
Trigger: CATCATAGTGGAAAAGAACCAAAGAATTCCATCAGA...TAGCCCCAGGAGTTGTGCGTGCAGCTCTGCACTGTACAGCGTGTTCCTGTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
CDS-3UTR CCA 90 bp CAGTCTGATCAGGAATGGCTTTCTGCAGTTCACCACCGCAGAAATTACACTTCTGCGTCCAAGTTCTTCTaGTATTGTGCTGGTCCGAAC +
Preference number: 4 (lower is better)
Translates to: QSDQEWLSAVHHRRNYTSASKFF*YCAGPN
Trigger: GTTCGGACCAGCACAATACCAGAAGAACTTGGACGC...AGAAGTGTAATTTCTGCGGTGGTGAACTGCAGAAAGCCATTCCTGATCAGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CCA 90 bp CAGGTCAAAGGCATCTGGGATGGATGGCTGAGCAGCTTTATTTGCTCACAGGGATATGACAAAGGGCAATaGCTTTCACTGCTTCATGGA +
Preference number: 4 (lower is better)
Translates to: QVKGIWDGWLSSFICSQGYDKGQ*LSLLHG
Trigger: TCCATGAAGCAGTGAAAGCCATTGCCCTTTGTCATA...TCCCTGTGAGCAAATAAAGCTGCTCAGCCATCCATCCCAGATGCCTTTGACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CCA 90 bp CTCTGGAGCCAAGAAGCTCTAGAATTTAAAACTACACCCACAAGGTTGTCTCAGCTGTCAGAGTCCTCTTaGCTACCACAAGGGTTCGCA +
Preference number: 4 (lower is better)
Translates to: LWSQEALEFKTTPTRLSQLSESS*LPQGFA
Trigger: TGCGAACCCTTGTGGTAGCCAAGAGGACTCTGACAG...CTGAGACAACCTTGTGGGTGTAGTTTTAAATTCTAGAGCTTCTTGGCTCCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091790.5
CDS-3UTR TCA 90 bp CATAGTGTCCGTTCCGTAGGAGACAGTGCCCAGATGGAGCCGCTTAAATACCATATTTCCTTGTCTCGCTaGAAACGTCGAAATTCATCA +
Preference number: 4 (lower is better)
Translates to: HSVRSVGDSAQMEPLKYHISLSR*KRRNSS
Trigger: TGATGAATTTCGACGTTTTCAGCGAGACAAGGAAAT...ATGGTATTTAAGCGGCTCCATCTGGGCACTGTCTCCTACGGAACGGACACTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000225205.2
ENSMUST00000225235.2
CDS-3UTR TCA 90 bp GGGGCTAACTCTAAGGCCAGAATTCCTCTAAAGAGCTCCCATGAGCCCTCAGTGTCCAACTTGTATGTCTaGGCTCTTAACTTGAACTTT +
Preference number: 4 (lower is better)
Translates to: GANSKARIPLKSSHEPSVSNLYV*ALNLNF
Trigger: AAAGTTCAAGTTAAGAGCTCAGACATACAAGTTGGA...CACTGAGGGCTCATGGGAGCTCTTTAGAGGAATTCTGGCCTTAGAGTTAGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
CDS-3UTR TCA 90 bp AGTCTGATCAGGAATGGCTTTCTGCAGTTCACCACCGCAGAAATTACACTTCTGATGCTGAGACTCTCATaGATGGGAGGATCACTGTCT +
Preference number: 4 (lower is better)
Translates to: SLIRNGFLQFTTAEITLLMLRLS*MGGSLS
Trigger: AGACAGTGATCCTCCCATTCATGAGAGTCTCAGCAT...CAGAAGTGTAATTTCTGCGGTGGTGAACTGCAGAAAGCCATTCCTGATCAGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
CDS-3UTR TCA 90 bp GCGTCCAAGTTCTTCTGGTATTGTGCTGGTCCGAACAACTGTACCAGGAATATTGAGTGTTCTCTATGCTaGGACTCTCATGAATGGGAG +
Preference number: 4 (lower is better)
Translates to: ASKFFWYCAGPNNCTRNIECSLC*DSHEWE
Trigger: CTCCCATTCATGAGAGTCTCAGCATAGAGAACACTC...AATATTCCTGGTACAGTTGTTCGGACCAGCACAATACCAGAAGAACTTGGACGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000223926.2
ENSMUST00000225205.2
ENSMUST00000225235.2
CDS-3UTR TCA 90 bp TTAGCTTCCTGTGTGTTCCTTTCTACCCAGCATACAGGAGGAGTGAGTGACCAGACTGGTCTGAAAACATaGATGTCTTGTGTTCTGGAC +
Preference number: 4 (lower is better)
Translates to: LASCVFLSTQHTGGVSDQTGLKT*MSCVLD
Trigger: GTCCAGAACACAAGACATTCATGTTTTCAGACCAGT...CTGGTCACTCACTCCTCCTGTATGCTGGGTAGAAAGGAACACACAGGAAGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR TCA 90 bp TTAGCTTCCTGTGTGTTCCTTTCTACCCAGCATACAGGAGGAGTGAGTGACCAGTGCAAAGTAGAAGACTaGAGAAAACACAGCCTGCAT +
Preference number: 4 (lower is better)
Translates to: LASCVFLSTQHTGGVSDQCKVED*RKHSLH
Trigger: ATGCAGGCTGTGTTTTCTTCAGTCTTCTACTTTGCA...CTGGTCACTCACTCCTCCTGTATGCTGGGTAGAAAGGAACACACAGGAAGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR TCA 90 bp TCTGTCAGTAAGTACACCAGGCGTCCAAGTTCTTCTGGTATTGTGCTGGTCCGATCCAATAAACCAACCTaGTGCAACAATAGTGCTTGC +
Preference number: 4 (lower is better)
Translates to: SVSKYTRRPSSSGIVLVRSNKPT*CNNSAC
Trigger: GCAAGCACTATTGTTGCATCAGGTTGGTTTATTGGA...TCGGACCAGCACAATACCAGAAGAACTTGGACGCCTGGTGTACTTACTGACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000225205.2
ENSMUST00000225235.2
CDS-3UTR GCA 90 bp CTGTCAGTAAGTACACCAGGCGTCCAAGTTCTTCTGGTATTGTGCTGGTCCGAACATCCATCCATATGCTaGTTTGCCCATATCCAAGTT +
Preference number: 4 (lower is better)
Translates to: LSVSTPGVQVLLVLCWSEHPSIC*FAHIQV
Trigger: AACTTGGATATGGGCAAAGCAGCATATGGATGGATG...TTCGGACCAGCACAATACCAGAAGAACTTGGACGCCTGGTGTACTTACTGACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223926.2
CDS-3UTR CCA 90 bp CTGGTTGCAGTTTCGTCTGTCAGGGGAATATGCTCACAGGTTGCTAAGAACAAAGCCAATCACAGCAACTaGTACAGAGGAACTTCCATC +
Preference number: 4 (lower is better)
Translates to: LVAVSSVRGICSQVAKNKANHSN*YRGTSI
Trigger: GATGGAAGTTCCTCTGTACCAGTTGCTGTGATTGGC...TTTGTTCTTAGCAACCTGTGAGCATATTCCCCTGACAGACGAAACTGCAACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CCA 90 bp TCAGTAAGTACACCAGGCGTCCAAGTTCTTCTGGTATTGTGCTGGTCCGAACAACTCTTCACACTTCTCTaGACATCCAAGCCATACTGT +
Preference number: 4 (lower is better)
Translates to: SVSTPGVQVLLVLCWSEQLFTLL*TSKPYC
Trigger: ACAGTATGGCTTGGATGTCCAGAGAAGTGTGAAGAG...TTGTTCGGACCAGCACAATACCAGAAGAACTTGGACGCCTGGTGTACTTACTGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000225205.2
ENSMUST00000225235.2
CDS-3UTR CCA 90 bp ACTCCTACTCAGGGAGCAAAGCATTGTGGTTGGTGCTGTGGCAGCACAGGACAGTCTGATGGAATTCTTTaGTTCTTTTCCACTATGATG +
Preference number: 4 (lower is better)
Translates to: TPTQGAKHCGWCCGSTGQSDGIL*FFSTMM
Trigger: CATCATAGTGGAAAAGAACCAAAGAATTCCATCAGA...CTGTCCTGTGCTGCCACAGCACCAACCACAATGCTTTGCTCCCTGAGTAGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
3UTR CAA 72 bp TTTGGCTTGACTGTATCGGCTCTCAAAATCCTGGTATaGCTCTTCTGTCAGAGTCCTCTTGGCTACCACAAG +
Preference number: 4 (lower is better)
Translates to: FGLTVSALKILV*LFCQSPLGYHK
Trigger: CTTGTGGTAGCCAAGAGGACTCTGACAGAAGAGCAATACCAGGATTTTGAGAGCCGATACAGTCAAGCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225235.2
CDS-3UTR TCA 90 bp CTGTCAGTAAGTACACCAGGCGTCCAAGTTCTTCTGGTATTGTGCTGGTCCGAAATTTCCTTGTCTCGCTaGAAACGTCGAAATTCATCA +
Preference number: 4 (lower is better)
Translates to: LSVSTPGVQVLLVLCWSEISLSR*KRRNSS
Trigger: TGATGAATTTCGACGTTTTCAGCGAGACAAGGAAAT...TTCGGACCAGCACAATACCAGAAGAACTTGGACGCCTGGTGTACTTACTGACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000225205.2
ENSMUST00000225235.2
CDS-3UTR TCA 90 bp ACAGTGACACCGTGTGGAGAATGGGAGAAACAGCTTTTCTGGTTGCAGTTTCGTAATACCATTTCATTCTaGGTGAGCGTCCCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: TVTPCGEWEKQLFWLQFRNTISF*VSVPVL
Trigger: CAAAACAGGGACGCTCACTCAGAATGAAATGGTATT...ACGAAACTGCAACCAGAAAAGCTGTTTCTCCCATTCTCCACACGGTGTCACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR GCA 90 bp AGTCTGATCAGGAATGGCTTTCTGCAGTTCACCACCGCAGAAATTACACTTCTGGGCAATGGCTTTCACTaGTTCATGGATTCTACTGCT +
Preference number: 4 (lower is better)
Translates to: SLIRNGFLQFTTAEITLLGNGFH*FMDSTA
Trigger: AGCAGTAGAATCCATGAAGCAGTGAAAGCCATTGCC...CAGAAGTGTAATTTCTGCGGTGGTGAACTGCAGAAAGCCATTCCTGATCAGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CCA 90 bp CTTGTGAGGCTTTCTATAACTCTTGACAAGCATGCTGTTAGCTTCCTGTGTGTTGGCATTTCATCCAAATaGGCAGACTCATCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LVRLSITLDKHAVSFLCVGISSK*ADSSSS
Trigger: GCTGGAGGATGAGTCTGCCCATTTGGATGAAATGCC...AACACACAGGAAGCTAACAGCATGCTTGTCAAGAGTTATAGAAAGCCTCACAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CCA 90 bp GGGAAGGGACTACTTTTCTGTCAGCGCCTTAGAAAGCTTCATGAAGACATTTTGGCCAATCACAGCAACTaGTACAGAGGAACTTCCATC +
Preference number: 4 (lower is better)
Translates to: GKGLLFCQRLRKLHEDILANHSN*YRGTSI
Trigger: GATGGAAGTTCCTCTGTACCAGTTGCTGTGATTGGC...CAAAATGTCTTCATGAAGCTTTCTAAGGCGCTGACAGAAAAGTAGTCCCTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000225205.2
CDS-3UTR CCA 90 bp TTCTGCAGTTCACCACCGCAGAAATTACACTTCTGGCGCTCAGGAGCGAAGCCTATGAATATCCAGTTGTaGCTTCTGAGCATAAACATA +
Preference number: 4 (lower is better)
Translates to: FCSSPPQKLHFWRSGAKPMNIQL*LLSINI
Trigger: TATGTTTATGCTCAGAAGCCACAACTGGATATTCAT...AGGCTTCGCTCCTGAGCGCCAGAAGTGTAATTTCTGCGGTGGTGAACTGCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
CDS-3UTR CCA 90 bp CTCTGGAGCCAAGAAGCTCTAGAATTTAAAACTACACCCACAAGGTTGTCTCAGCTTCTGGTATTGTGCTaGTCCGAACAACTGTACCAG +
Preference number: 4 (lower is better)
Translates to: LWSQEALEFKTTPTRLSQLLVLC*SEQLYQ
Trigger: CTGGTACAGTTGTTCGGACCAGCACAATACCAGAAG...CTGAGACAACCTTGTGGGTGTAGTTTTAAATTCTAGAGCTTCTTGGCTCCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091790.5
CDS-3UTR CCA 90 bp CTTGTGAGGCTTTCTATAACTCTTGACAAGCATGCTGTTAGCTTCCTGTGTGTTGCGTCCAAGTTCTTCTaGTATTGTGCTGGTCCGAAC +
Preference number: 4 (lower is better)
Translates to: LVRLSITLDKHAVSFLCVASKFF*YCAGPN
Trigger: GTTCGGACCAGCACAATACCAGAAGAACTTGGACGC...AACACACAGGAAGCTAACAGCATGCTTGTCAAGAGTTATAGAAAGCCTCACAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CCA 90 bp CTGGTTGCAGTTTCGTCTGTCAGGGGAATATGCTCACAGGTTGCTAAGAACAAACGGCTCTCAAAATCCTaGTATTGCTCTTCTGTCAGA +
Preference number: 4 (lower is better)
Translates to: LVAVSSVRGICSQVAKNKRLSKS*YCSSVR
Trigger: TCTGACAGAAGAGCAATACCAGGATTTTGAGAGCCG...TTTGTTCTTAGCAACCTGTGAGCATATTCCCCTGACAGACGAAACTGCAACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
3UTR CAA 72 bp TCAGTAAGTACACCAGGCGTCCAAGTTCTTCTGGTATaGTGCTGGTCCGAACAACTGTACCAGGAATATTCT +
Preference number: 4 (lower is better)
Translates to: SVSTPGVQVLLV*CWSEQLYQEYS
Trigger: AGAATATTCCTGGTACAGTTGTTCGGACCAGCACAATACCAGAAGAACTTGGACGCCTGGTGTACTTACTGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000225205.2
ENSMUST00000225235.2
3UTR CAA 72 bp GAGAATAACGTGCTTACCTCCTCTTCTAGCCAATCATaGTACTGGACAATGGTGGACATTGCGACATCAGCA +
Preference number: 4 (lower is better)
Translates to: ENNVLTSSSSQS*YWTMVDIATSA
Trigger: TGCTGATGTCGCAATGTCCACCATTGTCCAGTACAATGATTGGCTAGAAGAGGAGGTAAGCACGTTATTCTC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225205.2
CDS-3UTR TCA 90 bp CTTGTGAGGCTTTCTATAACTCTTGACAAGCATGCTGTTAGCTTCCTGTGTGTTGAGTGTTCTCTATGCTaGGACTCTCATGAATGGGAG +
Preference number: 4 (lower is better)
Translates to: LVRLSITLDKHAVSFLCVECSLC*DSHEWE
Trigger: CTCCCATTCATGAGAGTCTCAGCATAGAGAACACTC...AACACACAGGAAGCTAACAGCATGCTTGTCAAGAGTTATAGAAAGCCTCACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR TCA 90 bp GGGAAGGGACTACTTTTCTGTCAGCGCCTTAGAAAGCTTCATGAAGACATTTTGCCTTTGTCAGCTGATTaGGTTCGAGGTCCAATAAAC +
Preference number: 4 (lower is better)
Translates to: GKGLLFCQRLRKLHEDILPLSAD*VRGPIN
Trigger: GTTTATTGGACCTCGAACTCAATCAGCTGACAAAGG...CAAAATGTCTTCATGAAGCTTTCTAAGGCGCTGACAGAAAAGTAGTCCCTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000225205.2
CDS-3UTR TCA 90 bp CAGTCTGATCAGGAATGGCTTTCTGCAGTTCACCACCGCAGAAATTACACTTCTGACTGGTTACTGGTCTaGAAACATGAATGTCTTGTG +
Preference number: 4 (lower is better)
Translates to: QSDQEWLSAVHHRRNYTSDWLLV*KHECLV
Trigger: CACAAGACATTCATGTTTTCAGACCAGTAACCAGTC...AGAAGTGTAATTTCTGCGGTGGTGAACTGCAGAAAGCCATTCCTGATCAGACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR TCA 90 bp CAGTCTGATCAGGAATGGCTTTCTGCAGTTCACCACCGCAGAAATTACACTTCTTGCAAAGTAGAAGACTaGAGAAAACACAGCCTGCAT +
Preference number: 4 (lower is better)
Translates to: QSDQEWLSAVHHRRNYTSCKVED*RKHSLH
Trigger: ATGCAGGCTGTGTTTTCTTCAGTCTTCTACTTTGCA...AGAAGTGTAATTTCTGCGGTGGTGAACTGCAGAAAGCCATTCCTGATCAGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR GCA 90 bp CTGGTTGCAGTTTCGTCTGTCAGGGGAATATGCTCACAGGTTGCTAAGAACAAACATCCATCCATATGCTaGTTTGCCCATATCCAAGTT +
Preference number: 4 (lower is better)
Translates to: LVAVSSVRGICSQVAKNKHPSIC*FAHIQV
Trigger: AACTTGGATATGGGCAAAGCAGCATATGGATGGATG...TTTGTTCTTAGCAACCTGTGAGCATATTCCCCTGACAGACGAAACTGCAACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CCA 90 bp TCACTAAAGTCTTGGTCTGCTTCAGCAAACTCAGTCTCCCCAGTGATGCCAGCCTCTGATGGAATTCTTTaGTTCTTTTCCACTATGATG +
Preference number: 4 (lower is better)
Translates to: SLKSWSASANSVSPVMPASDGIL*FFSTMM
Trigger: CATCATAGTGGAAAAGAACCAAAGAATTCCATCAGA...GGCTGGCATCACTGGGGAGACTGAGTTTGCTGAAGCAGACCAAGACTTTAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000225205.2
ENSMUST00000225235.2
CDS-3UTR CCA 90 bp CTCTGGAGCCAAGAAGCTCTAGAATTTAAAACTACACCCACAAGGTTGTCTCAGTCCCCGACTGGTTACTaGTCTGAAAACATGAATGTC +
Preference number: 4 (lower is better)
Translates to: LWSQEALEFKTTPTRLSQSPTGY*SENMNV
Trigger: GACATTCATGTTTTCAGACCAGTAACCAGTCGGGGA...CTGAGACAACCTTGTGGGTGTAGTTTTAAATTCTAGAGCTTCTTGGCTCCAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000091790.5
CDS-3UTR TCA 90 bp ACAGTGACACCGTGTGGAGAATGGGAGAAACAGCTTTTCTGGTTGCAGTTTCGTTCCAACTTGTATGTCTaGGCTCTTAACTTGAACTTT +
Preference number: 4 (lower is better)
Translates to: TVTPCGEWEKQLFWLQFRSNLYV*ALNLNF
Trigger: AAAGTTCAAGTTAAGAGCTCAGACATACAAGTTGGA...ACGAAACTGCAACCAGAAAAGCTGTTTCTCCCATTCTCCACACGGTGTCACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR TCA 90 bp TCAGTAAGTACACCAGGCGTCCAAGTTCTTCTGGTATTGTGCTGGTCCGAACAATCCAACTTGTATGTCTaGGCTCTTAACTTGAACTTT +
Preference number: 4 (lower is better)
Translates to: SVSTPGVQVLLVLCWSEQSNLYV*ALNLNF
Trigger: AAAGTTCAAGTTAAGAGCTCAGACATACAAGTTGGA...TTGTTCGGACCAGCACAATACCAGAAGAACTTGGACGCCTGGTGTACTTACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000225205.2
ENSMUST00000225235.2
CDS-3UTR TCA 90 bp GGGAAGGGACTACTTTTCTGTCAGCGCCTTAGAAAGCTTCATGAAGACATTTTGTCCAATAAACCAACCTaGTGCAACAATAGTGCTTGC +
Preference number: 4 (lower is better)
Translates to: GKGLLFCQRLRKLHEDILSNKPT*CNNSAC
Trigger: GCAAGCACTATTGTTGCATCAGGTTGGTTTATTGGA...CAAAATGTCTTCATGAAGCTTTCTAAGGCGCTGACAGAAAAGTAGTCCCTTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000225205.2
CDS-3UTR CCA 90 bp GTAAGTACACCAGGCGTCCAAGTTCTTCTGGTATTGTGCTGGTCCGAACAACTGTCTGATGGAATTCTTTaGTTCTTTTCCACTATGATG +
Preference number: 4 (lower is better)
Translates to: VSTPGVQVLLVLCWSEQLSDGIL*FFSTMM
Trigger: CATCATAGTGGAAAAGAACCAAAGAATTCCATCAGA...CAGTTGTTCGGACCAGCACAATACCAGAAGAACTTGGACGCCTGGTGTACTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000223926.2
ENSMUST00000225205.2
ENSMUST00000225235.2
CDS-3UTR CCA 90 bp TTAGCTTCCTGTGTGTTCCTTTCTACCCAGCATACAGGAGGAGTGAGTGACCAGATGAATATCCAGTTGTaGCTTCTGAGCATAAACATA +
Preference number: 4 (lower is better)
Translates to: LASCVFLSTQHTGGVSDQMNIQL*LLSINI
Trigger: TATGTTTATGCTCAGAAGCCACAACTGGATATTCAT...CTGGTCACTCACTCCTCCTGTATGCTGGGTAGAAAGGAACACACAGGAAGCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CCA 90 bp CTGTCAGTAAGTACACCAGGCGTCCAAGTTCTTCTGGTATTGTGCTGGTCCGAAATGAATATCCAGTTGTaGCTTCTGAGCATAAACATA +
Preference number: 4 (lower is better)
Translates to: LSVSTPGVQVLLVLCWSEMNIQL*LLSINI
Trigger: TATGTTTATGCTCAGAAGCCACAACTGGATATTCAT...TTCGGACCAGCACAATACCAGAAGAACTTGGACGCCTGGTGTACTTACTGACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000223926.2
ENSMUST00000225205.2
ENSMUST00000225235.2
CDS-3UTR CCA 90 bp TCTGTCAGTAAGTACACCAGGCGTCCAAGTTCTTCTGGTATTGTGCTGGTCCGAATGAATATCCAGTTGTaGCTTCTGAGCATAAACATA +
Preference number: 4 (lower is better)
Translates to: SVSKYTRRPSSSGIVLVRMNIQL*LLSINI
Trigger: TATGTTTATGCTCAGAAGCCACAACTGGATATTCAT...TCGGACCAGCACAATACCAGAAGAACTTGGACGCCTGGTGTACTTACTGACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000223926.2
ENSMUST00000225205.2
ENSMUST00000225235.2
CDS-3UTR CCA 90 bp GAGCCCGGTCATGGATACTCAGTTTGGCTTGACTGTATCGGCTCTCAAAATCCTATGAATATCCAGTTGTaGCTTCTGAGCATAAACATA +
Preference number: 4 (lower is better)
Translates to: EPGHGYSVWLDCIGSQNPMNIQL*LLSINI
Trigger: TATGTTTATGCTCAGAAGCCACAACTGGATATTCAT...AGGATTTTGAGAGCCGATACAGTCAAGCCAAACTGAGTATCCATGACCGGGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000225235.2
3UTR CAA 72 bp TTCTGTCAGCGCCTTAGAAAGCTTCATGAAGACATTTaGTACAGAGCTGAGAATAACGTGCTTACCTCCTCT +
Preference number: 4 (lower is better)
Translates to: FCQRLRKLHEDI*YRAENNVLTSS
Trigger: AGAGGAGGTAAGCACGTTATTCTCAGCTCTGTACAAAATGTCTTCATGAAGCTTTCTAAGGCGCTGACAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000225205.2
CDS-3UTR TCA 90 bp TGGTATTGTGCTGGTCCGAACAACTGTACCAGGAATATTCTCATCTTTCATAATTGCTGGTACAAACTGTaGGCAGGACACTACCAGAAA +
Preference number: 4 (lower is better)
Translates to: WYCAGPNNCTRNILIFHNCWYKL*AGHYQK
Trigger: TTTCTGGTAGTGTCCTGCTCACAGTTTGTACCAGCA...ATTATGAAAGATGAGAATATTCCTGGTACAGTTGTTCGGACCAGCACAATACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000225205.2
ENSMUST00000225235.2
CDS-3UTR TCA 90 bp CTTGTGAGGCTTTCTATAACTCTTGACAAGCATGCTGTTAGCTTCCTGTGTGTTACTGGTCTGAAAACATaGATGTCTTGTGTTCTGGAC +
Preference number: 4 (lower is better)
Translates to: LVRLSITLDKHAVSFLCVTGLKT*MSCVLD
Trigger: GTCCAGAACACAAGACATTCATGTTTTCAGACCAGT...AACACACAGGAAGCTAACAGCATGCTTGTCAAGAGTTATAGAAAGCCTCACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR GCA 90 bp CTTGTGAGGCTTTCTATAACTCTTGACAAGCATGCTGTTAGCTTCCTGTGTGTTCATCCATCCATATGCTaGTTTGCCCATATCCAAGTT +
Preference number: 4 (lower is better)
Translates to: LVRLSITLDKHAVSFLCVHPSIC*FAHIQV
Trigger: AACTTGGATATGGGCAAAGCAGCATATGGATGGATG...AACACACAGGAAGCTAACAGCATGCTTGTCAAGAGTTATAGAAAGCCTCACAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CCA 90 bp CATATCCAAGTTTACTCGCAGACTTATGGGAATGATGTAGGAAAAGAGAAGGAGCTCTTCACACTTCTCTaGACATCCAAGCCATACTGT +
Preference number: 4 (lower is better)
Translates to: HIQVYSQTYGNDVGKEKELFTLL*TSKPYC
Trigger: ACAGTATGGCTTGGATGTCCAGAGAAGTGTGAAGAG...CTCCTTCTCTTTTCCTACATCATTCCCATAAGTCTGCGAGTAAACTTGGATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000225205.2
ENSMUST00000225235.2
CDS-3UTR CCA 90 bp CCATCCATATGCTGCTTTGCCCATATCCAAGTTTACTCGCAGACTTATGGGAATTCTGATGGAATTCTTTaGTTCTTTTCCACTATGATG +
Preference number: 4 (lower is better)
Translates to: PSICCFAHIQVYSQTYGNSDGIL*FFSTMM
Trigger: CATCATAGTGGAAAAGAACCAAAGAATTCCATCAGA...ATTCCCATAAGTCTGCGAGTAAACTTGGATATGGGCAAAGCAGCATATGGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000225205.2
ENSMUST00000225235.2
3UTR CAA 72 bp CCTGGTAAATGTTCCTTCAAAGCTATGAATATCCAGTaGTGGCTTCTGAGCATAAACATAGGCACTGATAGA +
Preference number: 4 (lower is better)
Translates to: PGKCSFKAMNIQ*WLLSINIGTDR
Trigger: TCTATCAGTGCCTATGTTTATGCTCAGAAGCCACAACTGGATATTCATAGCTTTGAAGGAACATTTACCAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000224709.2
CDS-3UTR TCA 90 bp AAGAAGGTCACGGTTGTGATGAAGGCAACATCAAAATACTCATTTAGAAAAGCAGTTCCTTCAAAGCTATaGATATCCAGTTGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: KKVTVVMKATSKYSFRKAVPSKL*ISSCGF
Trigger: GAAGCCACAACTGGATATTCATAGCTTTGAAGGAAC...TGCTTTTCTAAATGAGTATTTTGATGTTGCCTTCATCACAACCGTGACCTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000225235.2
CDS GCA 90 bp CCCGGGCCCGGCGGAGCTGTAGTAGGCCGCACGTCTGTGGCTGGCTaGGGCGCCCGCGCTGCGCACGGGGTACAGGGGAATCTGGTCCGC +
Preference number: 5 (lower is better)
Translates to: PGPGGAVVGRTSVAG*GARAAHGVQGNLVR
Trigger: GCGGACCAGATTCCCCTGTACCCCGTGCGCAGCGCGGGCGCCGCAGCCAGCCACAGACGTGCGGCCTACTACAGCTCCGCCGGGCCCGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000091790.5
ENSMUST00000225205.2
ENSMUST00000225235.2
ENSMUST00000225980.2
ENSMUST00000226064.2
CDS GCA 90 bp GTGGCATTTCATCCAAATGGGCAGACTCATCCTCCAGCTGGTACCTaGCGCGCCGGTCGGCACCGGGCCCGGGCCCGGCGGAGCTGTAGT +
Preference number: 5 (lower is better)
Translates to: VAFHPNGQTHPPAGT*RAGRHRARARRSCS
Trigger: ACTACAGCTCCGCCGGGCCCGGGCCCGGTGCCGACCGGCGCGGCAGGTACCAGCTGGAGGATGAGTCTGCCCATTTGGATGAAATGCCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000091790.5
ENSMUST00000225205.2
ENSMUST00000225235.2
ENSMUST00000225980.2
CDS CCA 90 bp ATCATCAGTGGCATTTCATCCAAATGGGCAGACTCATCCTCCAGCTaGTACCTGCCGCGCCGGTCGGCACCGGGCCCGGGCCCGGCGGAG +
Preference number: 5 (lower is better)
Translates to: IISGISSKWADSSSS*YLPRRSAPGPGPAE
Trigger: CTCCGCCGGGCCCGGGCCCGGTGCCGACCGGCGCGGCAGGTACCAGCTGGAGGATGAGTCTGCCCATTTGGATGAAATGCCACTGATGAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000091790.5
ENSMUST00000225205.2
ENSMUST00000225235.2
ENSMUST00000225980.2
CDS GCA 90 bp TCCATCCATATGCTGCTTTGCCCATATCCAAGTTTACTCGCAGACTaGCGCGCCGGTCGGCACCGGGCCCGGGCCCGGCGGAGCTGTAGT +
Preference number: 5 (lower is better)
Translates to: SIHMLLCPYPSLLAD*RAGRHRARARRSCS
Trigger: ACTACAGCTCCGCCGGGCCCGGGCCCGGTGCCGACCGGCGCGGCAGTCTGCGAGTAAACTTGGATATGGGCAAAGCAGCATATGGATGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226064.2
CDS-3UTR CAA 90 bp GCCCTCAGCCCGCCAGCAGTGCCAGTCCCTCATGCTGCCCAGCGCATGAGTCTCTTGGGTTGTGCCCACTaGGCTGTGAGTGTACCTGCA +
Preference number: 5 (lower is better)
Translates to: ALSPPAVPVPHAAQRMSLLGCAH*AVSVPA
Trigger: TGCAGGTACACTCACAGCCAAGTGGGCACAACCCAA...GAGACTCATGCGCTGGGCAGCATGAGGGACTGGCACTGCTGGCGGGCTGAGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CAA 90 bp AGGACAGCAGTGTCACCGCTTGGCCACCTGGGCTTGTGTGTGTGGTGTCCGCTGGGAGCAGAGCTTGGGTaGTGCCCACTTGGCTGTGAG +
Preference number: 5 (lower is better)
Translates to: RTAVSPLGHLGLCVWCPLGAELG*CPLGCE
Trigger: CTCACAGCCAAGTGGGCACAACCCAAGCTCTGCTCC...CAGCGGACACCACACACACAAGCCCAGGTGGCCAAGCGGTGACACTGCTGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CAA 90 bp CCTGCCCAGCTGTGCCGAGGCTGTCACTTCCTCTCAGTAGCTGTTCACGCAGTGATGATGCCCATCCGCTaGCTCTCGGAGGTGAAGGGG +
Preference number: 5 (lower is better)
Translates to: PAQLCRGCHFLSVAVHAVMMPIR*LSEVKG
Trigger: CCCCTTCACCTCCGAGAGCAAGCGGATGGGCATCAT...CACTGCGTGAACAGCTACTGAGAGGAAGTGACAGCCTCGGCACAGCTGGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CAA 90 bp CGCCCTCAGCCCGCCAGCAGTGCCAGTCCCTCATGCTGCCCAGCGCATGAGTCTCAGATGAGGAAGGTCTaGAAGGAAAGGGATCTTCCC +
Preference number: 5 (lower is better)
Translates to: RPQPASSASPSCCPAHESQMRKV*KERDLP
Trigger: GGGAAGATCCCTTTCCTTCAAGACCTTCCTCATCTG...AGACTCATGCGCTGGGCAGCATGAGGGACTGGCACTGCTGGCGGGCTGAGGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CAA 90 bp CCTGCCCAGCTGTGCCGAGGCTGTCACTTCCTCTCAGTAGCTGTTCACGCAGTGGCCAGAGAAGCCTGTTaGCCCTCCTTTCCTTCAATC +
Preference number: 5 (lower is better)
Translates to: PAQLCRGCHFLSVAVHAVAREAC*PSFPSI
Trigger: GATTGAAGGAAAGGAGGGCAAACAGGCTTCTCTGGC...CACTGCGTGAACAGCTACTGAGAGGAAGTGACAGCCTCGGCACAGCTGGGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CAA 90 bp AAGGCCAGAATTCCTCTAAAGAGCTCCCATGAGCCCTCAGTGCAGCCTTCGACAGGAGCAGAGCTTGGGTaGTGCCCACTTGGCTGTGAG +
Preference number: 5 (lower is better)
Translates to: KARIPLKSSHEPSVQPSTGAELG*CPLGCE
Trigger: CTCACAGCCAAGTGGGCACAACCCAAGCTCTGCTCC...TGTCGAAGGCTGCACTGAGGGCTCATGGGAGCTCTTTAGAGGAATTCTGGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CAA 90 bp GAGGACTCCTACTCAGGGAGCAAAGCATTGTGGTTGGTGCTGTGGCAGCACAGGTCTGTCAGAGTCCTCTaGGCTACCACAAGGGTTCGC +
Preference number: 5 (lower is better)
Translates to: EDSYSGSKALWLVLWQHRSVRVL*ATTRVR
Trigger: GCGAACCCTTGTGGTAGCCAAGAGGACTCTGACAGA...CCTGTGCTGCCACAGCACCAACCACAATGCTTTGCTCCCTGAGTAGGAGTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CAA 90 bp CAGTCTGATCAGGAATGGCTTTCTGCAGTTCACCACCGCAGAAATTACACTTCTGAGGGCTGGCAGCCGTaGTGTGCAGCTCACCGCCAC +
Preference number: 5 (lower is better)
Translates to: QSDQEWLSAVHHRRNYTSEGWQP*CAAHRH
Trigger: GTGGCGGTGAGCTGCACACAACGGCTGCCAGCCCTC...AGAAGTGTAATTTCTGCGGTGGTGAACTGCAGAAAGCCATTCCTGATCAGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
CDS-3UTR CAA 90 bp GTGCAAAGGAGACTCCCACAGCCTGCTCCCGAGCGTGAAGAGCCGAGGCCAAGAGATACTCAGTTTGGCTaGACTGTATCGGCTCTCAAA +
Preference number: 5 (lower is better)
Translates to: VQRRLPQPAPEREEPRPRDTQFG*TVSALK
Trigger: TTTGAGAGCCGATACAGTCAAGCCAAACTGAGTATC...TCTTGGCCTCGGCTCTTCACGCTCGGGAGCAGGCTGTGGGAGTCTCCTTTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS CCA 90 bp TTCTCAAAGCCTTCTTCAGACATCATCAGTGGCATTTCATCCAAATaGGCAGACTCATCCTCCAGCTGGTACCTGCCGCGCCGGTCGGCA +
Preference number: 5 (lower is better)
Translates to: FSKPSSDIISGISSK*ADSSSSWYLPRRSA
Trigger: TGCCGACCGGCGCGGCAGGTACCAGCTGGAGGATGAGTCTGCCCATTTGGATGAAATGCCACTGATGATGTCTGAAGAAGGCTTTGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000091790.5
ENSMUST00000225205.2
ENSMUST00000225235.2
ENSMUST00000225980.2
CDS-3UTR CAA 90 bp GTGCAAAGGAGACTCCCACAGCCTGCTCCCGAGCGTGAAGAGCCGAGGCCAAGAGCTATGAATATCCAGTaGTGGCTTCTGAGCATAAAC +
Preference number: 5 (lower is better)
Translates to: VQRRLPQPAPEREEPRPRAMNIQ*WLLSIN
Trigger: GTTTATGCTCAGAAGCCACAACTGGATATTCATAGC...TCTTGGCCTCGGCTCTTCACGCTCGGGAGCAGGCTGTGGGAGTCTCCTTTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
CDS-3UTR CAA 90 bp AGGACAGCAGTGTCACCGCTTGGCCACCTGGGCTTGTGTGTGTGGTGTCCGCTGCATGAGGATGCCTCCTaGGTAAATACTGATCAAAAC +
Preference number: 5 (lower is better)
Translates to: RTAVSPLGHLGLCVWCPLHEDAS*VNTDQN
Trigger: GTTTTGATCAGTATTTACCAAGGAGGCATCCTCATG...CAGCGGACACCACACACACAAGCCCAGGTGGCCAAGCGGTGACACTGCTGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CAA 90 bp CCTGCCCAGCTGTGCCGAGGCTGTCACTTCCTCTCAGTAGCTGTTCACGCAGTGGCTATGAATATCCAGTaGTGGCTTCTGAGCATAAAC +
Preference number: 5 (lower is better)
Translates to: PAQLCRGCHFLSVAVHAVAMNIQ*WLLSIN
Trigger: GTTTATGCTCAGAAGCCACAACTGGATATTCATAGC...CACTGCGTGAACAGCTACTGAGAGGAAGTGACAGCCTCGGCACAGCTGGGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
CDS-3UTR CAA 90 bp GTGCAAAGGAGACTCCCACAGCCTGCTCCCGAGCGTGAAGAGCCGAGGCCAAGACCTCTTACTGTAAGCTaGCTATATAACTGTGAATTC +
Preference number: 5 (lower is better)
Translates to: VQRRLPQPAPEREEPRPRPLTVS*LYNCEF
Trigger: GAATTCACAGTTATATAGCAAGCTTACAGTAAGAGG...TCTTGGCCTCGGCTCTTCACGCTCGGGAGCAGGCTGTGGGAGTCTCCTTTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
CDS-3UTR CAA 90 bp CAATGGCATGTGCAGGCATGGCCCCTGCAGTCTGATCAGGAATGGCTTTCTGCACAAGTTCTTCTGGTATaGTGCTGGTCCGAACAACTG +
Preference number: 5 (lower is better)
Translates to: QWHVQAWPLQSDQEWLSAQVLLV*CWSEQL
Trigger: CAGTTGTTCGGACCAGCACAATACCAGAAGAACTTG...TGCAGAAAGCCATTCCTGATCAGACTGCAGGGGCCATGCCTGCACATGCCATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CAA 90 bp AGTCTGATCAGGAATGGCTTTCTGCAGTTCACCACCGCAGAAATTACACTTCTGATGATGCCCATCCGCTaGCTCTCGGAGGTGAAGGGG +
Preference number: 5 (lower is better)
Translates to: SLIRNGFLQFTTAEITLLMMPIR*LSEVKG
Trigger: CCCCTTCACCTCCGAGAGCAAGCGGATGGGCATCAT...CAGAAGTGTAATTTCTGCGGTGGTGAACTGCAGAAAGCCATTCCTGATCAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CAA 90 bp CACGGACGAGGACTCCTACTCAGGGAGCAAAGCATTGTGGTTGGTGCTGTGGCAGATACTCAGTTTGGCTaGACTGTATCGGCTCTCAAA +
Preference number: 5 (lower is better)
Translates to: HGRGLLLREQSIVVGAVADTQFG*TVSALK
Trigger: TTTGAGAGCCGATACAGTCAAGCCAAACTGAGTATC...TGCCACAGCACCAACCACAATGCTTTGCTCCCTGAGTAGGAGTCCTCGTCCGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CAA 90 bp TGCAGAGCTGCACGCACAACTCCTGGGGCTAACTCTAAGGCCAGAATTCCTCTAATCTTGATCCCTGCATaGCGCAGCATCTCTAGTGTG +
Preference number: 5 (lower is better)
Translates to: CRAARTTPGANSKARIPLILIPA*RSISSV
Trigger: CACACTAGAGATGCTGCGCAATGCAGGGATCAAGAT...TAGAGGAATTCTGGCCTTAGAGTTAGCCCCAGGAGTTGTGCGTGCAGCTCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CAA 90 bp GGGGCTAACTCTAAGGCCAGAATTCCTCTAAAGAGCTCCCATGAGCCCTCAGTGGTTAGCATCCAAATCTaGATCCCTGCATTGCGCAGC +
Preference number: 5 (lower is better)
Translates to: GANSKARIPLKSSHEPSVVSIQI*IPALRS
Trigger: GCTGCGCAATGCAGGGATCAAGATTTGGATGCTAAC...CACTGAGGGCTCATGGGAGCTCTTTAGAGGAATTCTGGCCTTAGAGTTAGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CAA 90 bp GGGGCTAACTCTAAGGCCAGAATTCCTCTAAAGAGCTCCCATGAGCCCTCAGTGCAAGTTCTTCTGGTATaGTGCTGGTCCGAACAACTG +
Preference number: 5 (lower is better)
Translates to: GANSKARIPLKSSHEPSVQVLLV*CWSEQL
Trigger: CAGTTGTTCGGACCAGCACAATACCAGAAGAACTTG...CACTGAGGGCTCATGGGAGCTCTTTAGAGGAATTCTGGCCTTAGAGTTAGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CAA 90 bp CTGGTTGCAGTTTCGTCTGTCAGGGGAATATGCTCACAGGTTGCTAAGAACAAATCAGTGGAGCAGAGCTaGGGTTGTGCCCACTTGGCT +
Preference number: 5 (lower is better)
Translates to: LVAVSSVRGICSQVAKNKSVEQS*GCAHLA
Trigger: AGCCAAGTGGGCACAACCCAAGCTCTGCTCCACTGA...TTTGTTCTTAGCAACCTGTGAGCATATTCCCCTGACAGACGAAACTGCAACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CAA 90 bp CAGGTCAAAGGCATCTGGGATGGATGGCTGAGCAGCTTTATTTGCTCACAGGGAGTTAGCATCCAAATCTaGATCCCTGCATTGCGCAGC +
Preference number: 5 (lower is better)
Translates to: QVKGIWDGWLSSFICSQGVSIQI*IPALRS
Trigger: GCTGCGCAATGCAGGGATCAAGATTTGGATGCTAAC...TCCCTGTGAGCAAATAAAGCTGCTCAGCCATCCATCCCAGATGCCTTTGACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS GCA 90 bp AGGCAGACCTCCAGAGAATCCCCAGATATAACCAGTGCACAGTCATaGTTCCTTCTAAACGCATTTAGCTCCAAATGGGCTTCTCCCCGA +
Preference number: 5 (lower is better)
Translates to: RQTSRESPDITSAQS*FLLNAFSSKWASPR
Trigger: TCGGGGAGAAGCCCATTTGGAGCTAAATGCGTTTAGAAGGAAGCATGACTGTGCACTGGTTATATCTGGGGATTCTCTGGAGGTCTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CAA 90 bp CTCTGGAGCCAAGAAGCTCTAGAATTTAAAACTACACCCACAAGGTTGTCTCAGTCAGTGGAGCAGAGCTaGGGTTGTGCCCACTTGGCT +
Preference number: 5 (lower is better)
Translates to: LWSQEALEFKTTPTRLSQSVEQS*GCAHLA
Trigger: AGCCAAGTGGGCACAACCCAAGCTCTGCTCCACTGA...CTGAGACAACCTTGTGGGTGTAGTTTTAAATTCTAGAGCTTCTTGGCTCCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091790.5
CDS-3UTR CAA 90 bp CTGGTTGCAGTTTCGTCTGTCAGGGGAATATGCTCACAGGTTGCTAAGAACAAATCTGTCAGAGTCCTCTaGGCTACCACAAGGGTTCGC +
Preference number: 5 (lower is better)
Translates to: LVAVSSVRGICSQVAKNKSVRVL*ATTRVR
Trigger: GCGAACCCTTGTGGTAGCCAAGAGGACTCTGACAGA...TTTGTTCTTAGCAACCTGTGAGCATATTCCCCTGACAGACGAAACTGCAACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CAA 90 bp AAGGCCAGAATTCCTCTAAAGAGCTCCCATGAGCCCTCAGTGCAGCCTTCGACACTCAAAATCCTGGTATaGCTCTTCTGTCAGAGTCCT +
Preference number: 5 (lower is better)
Translates to: KARIPLKSSHEPSVQPSTLKILV*LFCQSP
Trigger: AGGACTCTGACAGAAGAGCAATACCAGGATTTTGAG...TGTCGAAGGCTGCACTGAGGGCTCATGGGAGCTCTTTAGAGGAATTCTGGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CAA 90 bp ACAGTGACACCGTGTGGAGAATGGGAGAAACAGCTTTTCTGGTTGCAGTTTCGTGAAAGGGATCTTCCCTaGGTGAGGTCCTTGTACAGC +
Preference number: 5 (lower is better)
Translates to: TVTPCGEWEKQLFWLQFRERDLP*VRSLYS
Trigger: GCTGTACAAGGACCTCACCAAGGGAAGATCCCTTTC...ACGAAACTGCAACCAGAAAAGCTGTTTCTCCCATTCTCCACACGGTGTCACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CAA 90 bp AAGGCCAGAATTCCTCTAAAGAGCTCCCATGAGCCCTCAGTGCAGCCTTCGACACATCCATATGCTGCTTaGCCCATATCCAAGTTTACT +
Preference number: 5 (lower is better)
Translates to: KARIPLKSSHEPSVQPSTHPYAA*PISKFT
Trigger: AGTAAACTTGGATATGGGCAAAGCAGCATATGGATG...TGTCGAAGGCTGCACTGAGGGCTCATGGGAGCTCTTTAGAGGAATTCTGGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CAA 90 bp GGGGCTAACTCTAAGGCCAGAATTCCTCTAAAGAGCTCCCATGAGCCCTCAGTGCATCCATATGCTGCTTaGCCCATATCCAAGTTTACT +
Preference number: 5 (lower is better)
Translates to: GANSKARIPLKSSHEPSVHPYAA*PISKFT
Trigger: AGTAAACTTGGATATGGGCAAAGCAGCATATGGATG...CACTGAGGGCTCATGGGAGCTCTTTAGAGGAATTCTGGCCTTAGAGTTAGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CAA 90 bp AGTCTGATCAGGAATGGCTTTCTGCAGTTCACCACCGCAGAAATTACACTTCTGGCCAGAGAAGCCTGTTaGCCCTCCTTTCCTTCAATC +
Preference number: 5 (lower is better)
Translates to: SLIRNGFLQFTTAEITLLAREAC*PSFPSI
Trigger: GATTGAAGGAAAGGAGGGCAAACAGGCTTCTCTGGC...CAGAAGTGTAATTTCTGCGGTGGTGAACTGCAGAAAGCCATTCCTGATCAGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS GCA 90 bp TTCCTTGTCTCGCTGAAAACGTCGAAATTCATCAATCGCTTCACGTaGAATCGTAACGGCCAAAACAAATCCCAGAGGAGCCCAGTAGGT +
Preference number: 5 (lower is better)
Translates to: FLVSLKTSKFINRFT*NRNGQNKSQRSPVG
Trigger: ACCTACTGGGCTCCTCTGGGATTTGTTTTGGCCGTTACGATTGCACGTGAAGCGATTGATGAATTTCGACGTTTTCAGCGAGACAAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000091790.5
ENSMUST00000225205.2
ENSMUST00000225235.2
ENSMUST00000225980.2
CDS-3UTR CAA 90 bp CATAGTGTCCGTTCCGTAGGAGACAGTGCCCAGATGGAGCCGCTTAAATACCATGCTATGAATATCCAGTaGTGGCTTCTGAGCATAAAC +
Preference number: 5 (lower is better)
Translates to: HSVRSVGDSAQMEPLKYHAMNIQ*WLLSIN
Trigger: GTTTATGCTCAGAAGCCACAACTGGATATTCATAGC...ATGGTATTTAAGCGGCTCCATCTGGGCACTGTCTCCTACGGAACGGACACTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000223926.2
ENSMUST00000225205.2
ENSMUST00000225235.2
CDS-3UTR CAA 90 bp CTTGTGAGGCTTTCTATAACTCTTGACAAGCATGCTGTTAGCTTCCTGTGTGTTTTGGGTTGTGCCCACTaGGCTGTGAGTGTACCTGCA +
Preference number: 5 (lower is better)
Translates to: LVRLSITLDKHAVSFLCVLGCAH*AVSVPA
Trigger: TGCAGGTACACTCACAGCCAAGTGGGCACAACCCAA...AACACACAGGAAGCTAACAGCATGCTTGTCAAGAGTTATAGAAAGCCTCACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CAA 90 bp TTAGCTTCCTGTGTGTTCCTTTCTACCCAGCATACAGGAGGAGTGAGTGACCAGCTCAAAATCCTGGTATaGCTCTTCTGTCAGAGTCCT +
Preference number: 5 (lower is better)
Translates to: LASCVFLSTQHTGGVSDQLKILV*LFCQSP
Trigger: AGGACTCTGACAGAAGAGCAATACCAGGATTTTGAG...CTGGTCACTCACTCCTCCTGTATGCTGGGTAGAAAGGAACACACAGGAAGCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CAA 90 bp CAGTCTGATCAGGAATGGCTTTCTGCAGTTCACCACCGCAGAAATTACACTTCTATCTTGATCCCTGCATaGCGCAGCATCTCTAGTGTG +
Preference number: 5 (lower is better)
Translates to: QSDQEWLSAVHHRRNYTSILIPA*RSISSV
Trigger: CACACTAGAGATGCTGCGCAATGCAGGGATCAAGAT...AGAAGTGTAATTTCTGCGGTGGTGAACTGCAGAAAGCCATTCCTGATCAGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS-3UTR CAA 90 bp CAGTCTGATCAGGAATGGCTTTCTGCAGTTCACCACCGCAGAAATTACACTTCTCAGATGAGGAAGGTCTaGAAGGAAAGGGATCTTCCC +
Preference number: 5 (lower is better)
Translates to: QSDQEWLSAVHHRRNYTSQMRKV*KERDLP
Trigger: GGGAAGATCCCTTTCCTTCAAGACCTTCCTCATCTG...AGAAGTGTAATTTCTGCGGTGGTGAACTGCAGAAAGCCATTCCTGATCAGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS GCA 90 bp TGTACCAGGAATATTCTCATCTTTCATAATCATCCATCCATATGCTaGTTTGCCCATATCCAAGTTTACTCGCAGACTGCCGCGCCGGTC +
Preference number: 5 (lower is better)
Translates to: CTRNILIFHNHPSIC*FAHIQVYSQTAAPV
Trigger: GACCGGCGCGGCAGTCTGCGAGTAAACTTGGATATGGGCAAAGCAGCATATGGATGGATGATTATGAAAGATGAGAATATTCCTGGTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226064.2
CDS-3UTR CAA 90 bp TCTGTCAGTAAGTACACCAGGCGTCCAAGTTCTTCTGGTATTGTGCTGGTCCGAGCTATGAATATCCAGTaGTGGCTTCTGAGCATAAAC +
Preference number: 5 (lower is better)
Translates to: SVSKYTRRPSSSGIVLVRAMNIQ*WLLSIN
Trigger: GTTTATGCTCAGAAGCCACAACTGGATATTCATAGC...TCGGACCAGCACAATACCAGAAGAACTTGGACGCCTGGTGTACTTACTGACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000223926.2
ENSMUST00000225205.2
ENSMUST00000225235.2
CDS-3UTR CAA 90 bp TCTGTCAGTAAGTACACCAGGCGTCCAAGTTCTTCTGGTATTGTGCTGGTCCGACATCCATATGCTGCTTaGCCCATATCCAAGTTTACT +
Preference number: 5 (lower is better)
Translates to: SVSKYTRRPSSSGIVLVRHPYAA*PISKFT
Trigger: AGTAAACTTGGATATGGGCAAAGCAGCATATGGATG...TCGGACCAGCACAATACCAGAAGAACTTGGACGCCTGGTGTACTTACTGACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223926.2
CDS-3UTR CAA 90 bp AAACTGCATCTGAAGAGGACGAGTTACCCACTGTCTCCTGAGGTGCAATGGCATCATGAGGATGCCTCCTaGGTAAATACTGATCAAAAC +
Preference number: 5 (lower is better)
Translates to: KLHLKRTSYPLSPEVQWHHEDAS*VNTDQN
Trigger: GTTTTGATCAGTATTTACCAAGGAGGCATCCTCATG...ATGCCATTGCACCTCAGGAGACAGTGGGTAACTCGTCCTCTTCAGATGCAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000091790.5
ENSMUST00000225980.2
CDS GCA 90 bp AACTGTACCAGGAATATTCTCATCTTTCATAATCATCCATCCATATaGTGCTTTGCCCATATCCAAGTTTACTCGCAGACTGCCGCGCCG +
Preference number: 5 (lower is better)
Translates to: NCTRNILIFHNHPSI*CFAHIQVYSQTAAP
Trigger: CGGCGCGGCAGTCTGCGAGTAAACTTGGATATGGGCAAAGCAGCATATGGATGGATGATTATGAAAGATGAGAATATTCCTGGTACAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226064.2
CDS-3UTR CAA 90 bp TATAAGCACACGGACGAGGACTCCTACTCAGGGAGCAAAGCATTGTGGTTGGTGCCTCTTACTGTAAGCTaGCTATATAACTGTGAATTC +
Preference number: 5 (lower is better)
Translates to: YKHTDEDSYSGSKALWLVPLTVS*LYNCEF
Trigger: GAATTCACAGTTATATAGCAAGCTTACAGTAAGAGG...CACCAACCACAATGCTTTGCTCCCTGAGTAGGAGTCCTCGTCCGTGTGCTTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
CDS CCA 90 bp GTAATCACTTTCATCATTCTCAAAGCCTTCTTCAGACATCATCAGTaGCATTTCATCCAAATGGGCAGACTCATCCTCCAGCTGGTACCT +
Preference number: 5 (lower is better)
Translates to: VITFIILKAFFRHHQ*HFIQMGRLILQLVP
Trigger: AGGTACCAGCTGGAGGATGAGTCTGCCCATTTGGATGAAATGCCACTGATGATGTCTGAAGAAGGCTTTGAGAATGATGAAAGTGATTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000091790.5
ENSMUST00000225205.2
ENSMUST00000225235.2
ENSMUST00000225980.2
CDS-3UTR CAA 90 bp CTGTCAGTAAGTACACCAGGCGTCCAAGTTCTTCTGGTATTGTGCTGGTCCGAACCTCTTACTGTAAGCTaGCTATATAACTGTGAATTC +
Preference number: 5 (lower is better)
Translates to: LSVSTPGVQVLLVLCWSEPLTVS*LYNCEF
Trigger: GAATTCACAGTTATATAGCAAGCTTACAGTAAGAGG...TTCGGACCAGCACAATACCAGAAGAACTTGGACGCCTGGTGTACTTACTGACAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000225205.2
ENSMUST00000225235.2
CDS-3UTR CAA 90 bp CAGTCTGATCAGGAATGGCTTTCTGCAGTTCACCACCGCAGAAATTACACTTCTGCTATGAATATCCAGTaGTGGCTTCTGAGCATAAAC +
Preference number: 5 (lower is better)
Translates to: QSDQEWLSAVHHRRNYTSAMNIQ*WLLSIN
Trigger: GTTTATGCTCAGAAGCCACAACTGGATATTCATAGC...AGAAGTGTAATTTCTGCGGTGGTGAACTGCAGAAAGCCATTCCTGATCAGACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091790.5
ENSMUST00000225235.2
ENSMUST00000225980.2
CDS TCA 90 bp CAGAAAGAACAACTAAAGCCAGAAATAGCGCCTTTGTCAGCTGATTaGGTTCGAGGTCCAATAAACCAACCTGATGCAACAATAGTGCTT +
Preference number: 5 (lower is better)
Translates to: QKEQLKPEIAPLSAD*VRGPINQPDATIVL
Trigger: AAGCACTATTGTTGCATCAGGTTGGTTTATTGGACCTCGAACTCAATCAGCTGACAAAGGCGCTATTTCTGGCTTTAGTTGTTCTTTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000225205.2
ENSMUST00000225235.2
CDS TCA 90 bp ACTGTAAGCTTGCTATATAACTGTGAATTCATTTCCTTGTCTCGCTaGAAACGTCGAAATTCATCAATCGCTTCACGTGCAATCGTAACG +
Preference number: 5 (lower is better)
Translates to: TVSLLYNCEFISLSR*KRRNSSIASRAIVT
Trigger: CGTTACGATTGCACGTGAAGCGATTGATGAATTTCGACGTTTTCAGCGAGACAAGGAAATGAATTCACAGTTATATAGCAAGCTTACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000091790.5
ENSMUST00000225205.2
ENSMUST00000225235.2
ENSMUST00000225980.2
CDS-3UTR CAA 90 bp TGGTATTGTGCTGGTCCGAACAACTGTACCAGGAATATTCTCATCTTTCATAATCCTCTTACTGTAAGCTaGCTATATAACTGTGAATTC +
Preference number: 5 (lower is better)
Translates to: WYCAGPNNCTRNILIFHNPLTVS*LYNCEF
Trigger: GAATTCACAGTTATATAGCAAGCTTACAGTAAGAGG...ATTATGAAAGATGAGAATATTCCTGGTACAGTTGTTCGGACCAGCACAATACCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000225205.2
ENSMUST00000225235.2
CDS GCA 72 bp CATCCAAATGGGCAGACTCATCCTCCAGCTGGTACCTaGCGCGCCGGTCGGCACCGGGCCCGGGCCCGGCGG +
Preference number: 6 (lower is better)
Translates to: HPNGQTHPPAGT*RAGRHRARARR
Trigger: CCGCCGGGCCCGGGCCCGGTGCCGACCGGCGCGGCAGGTACCAGCTGGAGGATGAGTCTGCCCATTTGGATG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000091790.5
ENSMUST00000225205.2
ENSMUST00000225235.2
ENSMUST00000225980.2
CDS GCA 72 bp GGCGGAGCTGTAGTAGGCCGCACGTCTGTGGCTGGCTaGGGCGCCCGCGCTGCGCACGGGGTACAGGGGAAT +
Preference number: 6 (lower is better)
Translates to: GGAVVGRTSVAG*GARAAHGVQGN
Trigger: ATTCCCCTGTACCCCGTGCGCAGCGCGGGCGCCGCAGCCAGCCACAGACGTGCGGCCTACTACAGCTCCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000091790.5
ENSMUST00000225205.2
ENSMUST00000225235.2
ENSMUST00000225980.2
ENSMUST00000226064.2
CDS GCA 72 bp ATGCTGCTTTGCCCATATCCAAGTTTACTCGCAGACTaGCGCGCCGGTCGGCACCGGGCCCGGGCCCGGCGG +
Preference number: 6 (lower is better)
Translates to: MLLCPYPSLLAD*RAGRHRARARR
Trigger: CCGCCGGGCCCGGGCCCGGTGCCGACCGGCGCGGCAGTCTGCGAGTAAACTTGGATATGGGCAAAGCAGCAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226064.2
CDS CCA 72 bp GGCATTTCATCCAAATGGGCAGACTCATCCTCCAGCTaGTACCTGCCGCGCCGGTCGGCACCGGGCCCGGGC +
Preference number: 6 (lower is better)
Translates to: GISSKWADSSSS*YLPRRSAPGPG
Trigger: GCCCGGGCCCGGTGCCGACCGGCGCGGCAGGTACCAGCTGGAGGATGAGTCTGCCCATTTGGATGAAATGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000091790.5
ENSMUST00000225205.2
ENSMUST00000225235.2
ENSMUST00000225980.2
CDS CAA 90 bp CCAGGAATATTCTCATCTTTCATAATCATCCATCCATATGCTGCTTaGCCCATATCCAAGTTTACTCGCAGACTGCCGCGCCGGTCGGCA +
Preference number: 6 (lower is better)
Translates to: PGIFSSFIIIHPYAA*PISKFTRRLPRRSA
Trigger: TGCCGACCGGCGCGGCAGTCTGCGAGTAAACTTGGATATGGGCAAAGCAGCATATGGATGGATGATTATGAAAGATGAGAATATTCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226064.2
CDS GCA 72 bp TCGCTGAAAACGTCGAAATTCATCAATCGCTTCACGTaGAATCGTAACGGCCAAAACAAATCCCAGAGGAGC +
Preference number: 6 (lower is better)
Translates to: SLKTSKFINRFT*NRNGQNKSQRS
Trigger: GCTCCTCTGGGATTTGTTTTGGCCGTTACGATTGCACGTGAAGCGATTGATGAATTTCGACGTTTTCAGCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000091790.5
ENSMUST00000225205.2
ENSMUST00000225235.2
ENSMUST00000225980.2
CDS TCA 72 bp CAACTAAAGCCAGAAATAGCGCCTTTGTCAGCTGATTaGGTTCGAGGTCCAATAAACCAACCTGATGCAACA +
Preference number: 6 (lower is better)
Translates to: QLKPEIAPLSAD*VRGPINQPDAT
Trigger: TGTTGCATCAGGTTGGTTTATTGGACCTCGAACTCAATCAGCTGACAAAGGCGCTATTTCTGGCTTTAGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000225205.2
ENSMUST00000225235.2
CDS CCA 72 bp TTCATCATTCTCAAAGCCTTCTTCAGACATCATCAGTaGCATTTCATCCAAATGGGCAGACTCATCCTCCAG +
Preference number: 6 (lower is better)
Translates to: FIILKAFFRHHQ*HFIQMGRLILQ
Trigger: CTGGAGGATGAGTCTGCCCATTTGGATGAAATGCCACTGATGATGTCTGAAGAAGGCTTTGAGAATGATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000091790.5
ENSMUST00000225205.2
ENSMUST00000225235.2
ENSMUST00000225980.2
CDS TCA 72 bp TTGCTATATAACTGTGAATTCATTTCCTTGTCTCGCTaGAAACGTCGAAATTCATCAATCGCTTCACGTGCA +
Preference number: 6 (lower is better)
Translates to: LLYNCEFISLSR*KRRNSSIASRA
Trigger: TGCACGTGAAGCGATTGATGAATTTCGACGTTTTCAGCGAGACAAGGAAATGAATTCACAGTTATATAGCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000091790.5
ENSMUST00000225205.2
ENSMUST00000225235.2
ENSMUST00000225980.2