Pregenerated sensors for ATP8B4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000060131Ensembl transcript IDs: ENSMUST00000040128.12, ENSMUST00000040149.13, ENSMUST00000129187.2, ENSMUST00000147517.8
Found 227 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAGGAGGTGCTCCGAAACAGGAATGGGAGAACTGTCTCACGGCCCTaGCCCTTCCCAGACTCCCTTTCCTTCAACACGCACCTGAGTTCT | + |
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Preference number: 1 (lower is better) Translates to: KEVLRNRNGRTVSRP*PFPDSLSFNTHLSS Trigger: AGAACTCAGGTGCGTGTTGAAGGAAAGGGAGTCTGGGAAGGGGCAGGGCCGTGAGACAGTTCTCCCATTCCTGTTTCGGAGCACCTCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147517.8 |
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| 3UTR TCA 90 bp | GACAGTGCCCATCTGGCCTGGAATCCTGCAGAAAACATCGCTATCTaGCAGGCGTTGGCAGCTGGAGGCCATGGATTTAAGTTAAGCAAT | + |
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Preference number: 1 (lower is better) Translates to: DSAHLAWNPAENIAI*QALAAGGHGFKLSN Trigger: ATTGCTTAACTTAAATCCATGGCCTCCAGCTGCCAACGCCTGTCAGATAGCGATGTTTTCTGCAGGATTCCAGGCCAGATGGGCACTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
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| 3UTR GCA 90 bp | ACTTGTCCCATGAGGCCTTGGTCTACAGAATCACAGATTGGACAGTaGCCATCTGGCCTGGAATCCTGCAGAAAACATCGCTATCTGACA | + |
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Preference number: 1 (lower is better) Translates to: TCPMRPWSTESQIGQ*PSGLESCRKHRYLT Trigger: TGTCAGATAGCGATGTTTTCTGCAGGATTCCAGGCCAGATGGGCACTGTCCAATCTGTGATTCTGTAGACCAAGGCCTCATGGGACAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
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| 3UTR TCA 90 bp | ACCTTACCTCCCCATCACGGAGGTAAGTGGGTGTCAGCAGCAATTTaGATACAGAACCTAGTGAGTTGTCTACAGATCCCCAAATTGGGC | + |
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Preference number: 1 (lower is better) Translates to: TLPPHHGGKWVSAAI*IQNLVSCLQIPKLG Trigger: GCCCAATTTGGGGATCTGTAGACAACTCACTAGGTTCTGTATTCAAATTGCTGCTGACACCCACTTACCTCCGTGATGGGGAGGTAAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
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| 3UTR CCA 90 bp | AATCTGTACTTGTCCCATGAGGCCTTGGTCTACAGAATCACAGATTaGACAGTGCCCATCTGGCCTGGAATCCTGCAGAAAACATCGCTA | + |
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Preference number: 1 (lower is better) Translates to: NLYLSHEALVYRITD*TVPIWPGILQKTSL Trigger: TAGCGATGTTTTCTGCAGGATTCCAGGCCAGATGGGCACTGTCCAATCTGTGATTCTGTAGACCAAGGCCTCATGGGACAAGTACAGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
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| 3UTR CCA 90 bp | TTAAAGCACAACATACATGACTTGAGATTCTTCCCTGAGAACACCTaGGAAATGTTGGAGGCCCGAAGGCAATGCCTCGTTGCCAATATC | + |
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Preference number: 1 (lower is better) Translates to: LKHNIHDLRFFPENT*EMLEARRQCLVANI Trigger: GATATTGGCAACGAGGCATTGCCTTCGGGCCTCCAACATTTCCCAGGTGTTCTCAGGGAAGAATCTCAAGTCATGTATGTTGTGCTTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147517.8 |
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| 3UTR TCA 90 bp | TACAGTTTTATTTGCTTTCTATCATACTTAGCAACCTCATTTCTTTaGCAGTCCCACTGGCGACTGGCATCCCAGGTCCTGAAGTCTCTC | + |
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Preference number: 1 (lower is better) Translates to: YSFICFLSYLATSFL*QSHWRLASQVLKSL Trigger: GAGAGACTTCAGGACCTGGGATGCCAGTCGCCAGTGGGACTGTCAAAGAAATGAGGTTGCTAAGTATGATAGAAAGCAAATAAAACTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
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| 3UTR TCA 90 bp | AGACCACATAAGATTAACAAGCTCTTTGTGCAAAGTAGTTTTGGTTaGTCAGCAATTGCCTGGGAACCCAGAGAAGGAAGGCTAGAGAGC | + |
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Preference number: 1 (lower is better) Translates to: RPHKINKLFVQSSFG*SAIAWEPREGRLES Trigger: GCTCTCTAGCCTTCCTTCTCTGGGTTCCCAGGCAATTGCTGATCAACCAAAACTACTTTGCACAAAGAGCTTGTTAATCTTATGTGGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
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| 3UTR TCA 90 bp | TCGGATGGATTGGTGTTTAAGTTAATAAAATCTGTACTTGTCCCATaGGGCCTTGGTCTACAGAATCACAGATTGGACAGTGCCCATCTG | + |
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Preference number: 1 (lower is better) Translates to: SDGLVFKLIKSVLVP*GLGLQNHRLDSAHL Trigger: CAGATGGGCACTGTCCAATCTGTGATTCTGTAGACCAAGGCCTCATGGGACAAGTACAGATTTTATTAACTTAAACACCAATCCATCCGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
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| 3UTR CCA 90 bp | CTGATAAGTCACCGGTGTTCCCAATTCTTCTATTGTAATTGTCTCTaGAGTTCGAGACTTAAAAATGAACCCAAAATTTCTAGCAGCAGT | + |
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Preference number: 1 (lower is better) Translates to: LISHRCSQFFYCNCL*SSRLKNEPKISSSS Trigger: ACTGCTGCTAGAAATTTTGGGTTCATTTTTAAGTCTCGAACTCCAGAGACAATTACAATAGAAGAATTGGGAACACCGGTGACTTATCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147517.8 |
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| 3UTR-3UTR GCA 90 bp | GTGCCCATCTGGCCTGGAATCCTGCAGAAAACATCGCTATCTGACAGGCGTTGGCAATGTGATCTGCCCTaGTCCTGGCCCCTGAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: VPIWPGILQKTSLSDRRWQCDLP*SWPLSC Trigger: GCAGCTCAGGGGCCAGGAGCAGGGCAGATCACATTG...CCAACGCCTGTCAGATAGCGATGTTTTCTGCAGGATTCCAGGCCAGATGGGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
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| 3UTR-3UTR GCA 90 bp | GCCTTGGTCTACAGAATCACAGATTGGACAGTGCCCATCTGGCCTGGAATCCTGCAATGTGATCTGCCCTaGTCCTGGCCCCTGAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: ALVYRITDWTVPIWPGILQCDLP*SWPLSC Trigger: GCAGCTCAGGGGCCAGGAGCAGGGCAGATCACATTG...CAGGATTCCAGGCCAGATGGGCACTGTCCAATCTGTGATTCTGTAGACCAAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
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| 3UTR-3UTR CCA 90 bp | GATTGGACAGTGCCCATCTGGCCTGGAATCCTGCAGAAAACATCGCTATCTGACGATCTGCCCTGCTCCTaGCCCCTGAGCTGCCTAAGC | + |
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Preference number: 2 (lower is better) Translates to: DWTVPIWPGILQKTSLSDDLPCS*PLSCLS Trigger: GCTTAGGCAGCTCAGGGGCCAGGAGCAGGGCAGATC...GTCAGATAGCGATGTTTTCTGCAGGATTCCAGGCCAGATGGGCACTGTCCAATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
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| 3UTR-3UTR GCA 90 bp | GATTGGACAGTGCCCATCTGGCCTGGAATCCTGCAGAAAACATCGCTATCTGACTCCTGGCCCCTGAGCTaGCTAAGCTCAGCCCCAGAT | + |
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Preference number: 2 (lower is better) Translates to: DWTVPIWPGILQKTSLSDSWPLS*LSSAPD Trigger: ATCTGGGGCTGAGCTTAGGCAGCTCAGGGGCCAGGA...GTCAGATAGCGATGTTTTCTGCAGGATTCCAGGCCAGATGGGCACTGTCCAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
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| 3UTR-3UTR CCA 90 bp | TACTTGTCCCATGAGGCCTTGGTCTACAGAATCACAGATTGGACAGTGCCCATCGATCTGCCCTGCTCCTaGCCCCTGAGCTGCCTAAGC | + |
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Preference number: 2 (lower is better) Translates to: YLSHEALVYRITDWTVPIDLPCS*PLSCLS Trigger: GCTTAGGCAGCTCAGGGGCCAGGAGCAGGGCAGATC...GATGGGCACTGTCCAATCTGTGATTCTGTAGACCAAGGCCTCATGGGACAAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
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| 3UTR-3UTR TCA 90 bp | CACAGATTGGACAGTGCCCATCTGGCCTGGAATCCTGCAGAAAACATCGCTATCCAGCCCCAGATGAGGTaGAAAGACGGCTTTGTGGTC | + |
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Preference number: 2 (lower is better) Translates to: HRLDSAHLAWNPAENIAIQPQMR*KDGFVV Trigger: GACCACAAAGCCGTCTTTTCACCTCATCTGGGGCTG...GATAGCGATGTTTTCTGCAGGATTCCAGGCCAGATGGGCACTGTCCAATCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
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| 3UTR-3UTR TCA 90 bp | TCCCATGAGGCCTTGGTCTACAGAATCACAGATTGGACAGTGCCCATCTGGCCTAAGCTCAGCCCCAGATaGGGTGAAAAGACGGCTTTG | + |
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Preference number: 2 (lower is better) Translates to: SHEALVYRITDWTVPIWPKLSPR*GEKTAL Trigger: CAAAGCCGTCTTTTCACCTCATCTGGGGCTGAGCTT...AGGCCAGATGGGCACTGTCCAATCTGTGATTCTGTAGACCAAGGCCTCATGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
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| 3UTR-3UTR TCA 90 bp | TCACAGATTGGACAGTGCCCATCTGGCCTGGAATCCTGCAGAAAACATCGCTATCAGCCCCAGATGAGGTaGAAAGACGGCTTTGTGGTC | + |
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Preference number: 2 (lower is better) Translates to: SQIGQCPSGLESCRKHRYQPQMR*KDGFVV Trigger: GACCACAAAGCCGTCTTTTCACCTCATCTGGGGCTG...ATAGCGATGTTTTCTGCAGGATTCCAGGCCAGATGGGCACTGTCCAATCTGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
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| 3UTR-3UTR GCA 90 bp | TTGCTTTCTATCATACTTAGCAACCTCATTTCTTTGACAGTCCCACTGGCGACTTCCTGGCCCCTGAGCTaGCTAAGCTCAGCCCCAGAT | + |
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Preference number: 2 (lower is better) Translates to: LLSIILSNLISLTVPLATSWPLS*LSSAPD Trigger: ATCTGGGGCTGAGCTTAGGCAGCTCAGGGGCCAGGA...AGTCGCCAGTGGGACTGTCAAAGAAATGAGGTTGCTAAGTATGATAGAAAGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
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| 3UTR-3UTR GCA 90 bp | AGACTCCCTTTCCTTCAACACGCACCTGAGTTCTTCTCGCACTTCCCCAGCCGTTCTGATGTTAAGGACTaGAGGTCTTCATTGGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: RLPFLQHAPEFFSHFPSRSDVKD*RSSLEG Trigger: TCCTTCCAATGAAGACCTGCAGTCCTTAACATCAGA...ACGGCTGGGGAAGTGCGAGAAGAACTCAGGTGCGTGTTGAAGGAAAGGGAGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147517.8 |
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| 3UTR-3UTR CCA 90 bp | CTCGATTTCTTCATACAGCCCAGATATCCGTTCATCCCTTTCCAAGGTGGCAGAGGAATTCATGGACTTTaGGGTCCCCCAGCTCAATGG | + |
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Preference number: 2 (lower is better) Translates to: LDFFIQPRYPFIPFQGGRGIHGL*GPPAQW Trigger: CCATTGAGCTGGGGGACCCCAAAGTCCATGAATTCC...TCTGCCACCTTGGAAAGGGATGAACGGATATCTGGGCTGTATGAAGAAATCGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147517.8 |
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| 3UTR CAA 90 bp | AACATACATGACTTGAGATTCTTCCCTGAGAACACCTGGGAAATGTaGGAGGCCCGAAGGCAATGCCTCGTTGCCAATATCAACCCTTGG | + |
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Preference number: 2 (lower is better) Translates to: NIHDLRFFPENTWEM*EARRQCLVANINPW Trigger: CCAAGGGTTGATATTGGCAACGAGGCATTGCCTTCGGGCCTCCAACATTTCCCAGGTGTTCTCAGGGAAGAATCTCAAGTCATGTATGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147517.8 |
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| 3UTR-3UTR TCA 90 bp | CTGCCCCTTCCCAGACTCCCTTTCCTTCAACACGCACCTGAGTTCTTCTCGCACTTTTCCGGATGTTGTTaGAATCCAAAAAGGCAAGTA | + |
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Preference number: 2 (lower is better) Translates to: LPLPRLPFLQHAPEFFSHFSGCC*NPKRQV Trigger: TACTTGCCTTTTTGGATTTCAACAACATCCGGAAAA...GTGCGAGAAGAACTCAGGTGCGTGTTGAAGGAAAGGGAGTCTGGGAAGGGGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000147517.8 |
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| 3UTR-3UTR CCA 90 bp | AAACAGGAATGGGAGAACTGTCTCACGGCCCTGCCCCTTCCCAGACTCCCTTTCTTTTATACGTCCTTCTaGGTTTCGAACTATGACAGA | + |
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Preference number: 2 (lower is better) Translates to: KQEWENCLTALPLPRLPFFYTSF*VSNYDR Trigger: TCTGTCATAGTTCGAAACCCAGAAGGACGTATAAAA...GAAAGGGAGTCTGGGAAGGGGCAGGGCCGTGAGACAGTTCTCCCATTCCTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147517.8 |
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| 3UTR-3UTR CCA 90 bp | AGCAATTTGAATACAGAACCTAGTGAGTTGTCTACAGATCCCCAAATTGGGCTGTGCCCATGGCCTGCATaGAACACTGTCAATAAAGGG | + |
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Preference number: 2 (lower is better) Translates to: SNLNTEPSELSTDPQIGLCPWPA*NTVNKG Trigger: CCCTTTATTGACAGTGTTCCATGCAGGCCATGGGCA...CAGCCCAATTTGGGGATCTGTAGACAACTCACTAGGTTCTGTATTCAAATTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
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| 3UTR CAA 90 bp | CTACAGTTTTATTTGCTTTCTATCATACTTAGCAACCTCATTTCTTaGACAGTCCCACTGGCGACTGGCATCCCAGGTCCTGAAGTCTCT | + |
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Preference number: 2 (lower is better) Translates to: LQFYLLSIILSNLIS*TVPLATGIPGPEVS Trigger: AGAGACTTCAGGACCTGGGATGCCAGTCGCCAGTGGGACTGTCAAAGAAATGAGGTTGCTAAGTATGATAGAAAGCAAATAAAACTGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
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| 3UTR CAA 90 bp | TCCCAGCCCATCATCCATCAAGACCACATAAGATTAACAAGCTCTTaGTGCAAAGTAGTTTTGGTTGATCAGCAATTGCCTGGGAACCCA | + |
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Preference number: 2 (lower is better) Translates to: SQPIIHQDHIRLTSS*CKVVLVDQQLPGNP Trigger: TGGGTTCCCAGGCAATTGCTGATCAACCAAAACTACTTTGCACAAAGAGCTTGTTAATCTTATGTGGTCTTGATGGATGATGGGCTGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
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| 3UTR-3UTR TCA 90 bp | AGCAATTTGAATACAGAACCTAGTGAGTTGTCTACAGATCCCCAAATTGGGCTGTCTGTACTTGTCCCATaGGGCCTTGGTCTACAGAAT | + |
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Preference number: 2 (lower is better) Translates to: SNLNTEPSELSTDPQIGLSVLVP*GLGLQN Trigger: ATTCTGTAGACCAAGGCCTCATGGGACAAGTACAGA...CAGCCCAATTTGGGGATCTGTAGACAACTCACTAGGTTCTGTATTCAAATTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
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| 3UTR-3UTR TCA 90 bp | CATCATCCATCAAGACCACATAAGATTAACAAGCTCTTTGTGCAAAGTAGTTTTAAGCTCAGCCCCAGATaGGGTGAAAAGACGGCTTTG | + |
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Preference number: 2 (lower is better) Translates to: HHPSRPHKINKLFVQSSFKLSPR*GEKTAL Trigger: CAAAGCCGTCTTTTCACCTCATCTGGGGCTGAGCTT...AAAACTACTTTGCACAAAGAGCTTGTTAATCTTATGTGGTCTTGATGGATGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
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| 3UTR-3UTR CCA 90 bp | CATCATCCATCAAGACCACATAAGATTAACAAGCTCTTTGTGCAAAGTAGTTTTTGGACAGTGCCCATCTaGCCTGGAATCCTGCAGAAA | + |
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Preference number: 2 (lower is better) Translates to: HHPSRPHKINKLFVQSSFWTVPI*PGILQK Trigger: TTTCTGCAGGATTCCAGGCCAGATGGGCACTGTCCA...AAAACTACTTTGCACAAAGAGCTTGTTAATCTTATGTGGTCTTGATGGATGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
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| 3UTR-3UTR CCA 90 bp | TTGCTTTCTATCATACTTAGCAACCTCATTTCTTTGACAGTCCCACTGGCGACTGTTGACATGCGTTTTTaGTTGAAACACATCATTGGA | + |
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Preference number: 2 (lower is better) Translates to: LLSIILSNLISLTVPLATVDMRF*LKHIIG Trigger: TCCAATGATGTGTTTCAACCAAAAACGCATGTCAAC...AGTCGCCAGTGGGACTGTCAAAGAAATGAGGTTGCTAAGTATGATAGAAAGCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
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| 3UTR CAA 90 bp | TTCTGTGACGACACCACTCATCGTCACTTAATATCTTCCAGGTTTTaGTCAAGGAACATTTTAAAGCACAACATACATGACTTGAGATTC | + |
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Preference number: 2 (lower is better) Translates to: FCDDTTHRHLISSRF*SRNILKHNIHDLRF Trigger: GAATCTCAAGTCATGTATGTTGTGCTTTAAAATGTTCCTTGACAAAAACCTGGAAGATATTAAGTGACGATGAGTGGTGTCGTCACAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147517.8 |
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| 3UTR CCA 72 bp | CCCAGTACTCCATACCCCAGAGACCTGACTCGGAGATaGAAGGGAGCCAGGAAACGGGTTTTTAAAGCGTAC | + |
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Preference number: 3 (lower is better) Translates to: PSTPYPRDLTRR*KGARKRVFKAY Trigger: GTACGCTTTAAAAACCCGTTTCCTGGCTCCCTTCCATCTCCGAGTCAGGTCTCTGGGGTATGGAGTACTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147517.8 |
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| 3UTR-3UTR CAA 90 bp | ACCTGGGAAATGTTGGAGGCCCGAAGGCAATGCCTCGTTGCCAATATCAACCCTAGGAATTCATGGACTTaGGGGTCCCCCAGCTCAATG | + |
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Preference number: 3 (lower is better) Translates to: TWEMLEARRQCLVANINPRNSWT*GSPSSM Trigger: CATTGAGCTGGGGGACCCCAAAGTCCATGAATTCCT...AGGGTTGATATTGGCAACGAGGCATTGCCTTCGGGCCTCCAACATTTCCCAGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147517.8 |
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| 3UTR GCA 72 bp | CTGGGAAATGTTGGAGGCCCGAAGGCAATGCCTCGTTaGCAATATCAACCCTTGGTGAGGAACGTGATTGAG | + |
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Preference number: 3 (lower is better) Translates to: LGNVGGPKAMPR*QYQPLVRNVIE Trigger: CTCAATCACGTTCCTCACCAAGGGTTGATATTGGCAACGAGGCATTGCCTTCGGGCCTCCAACATTTCCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147517.8 |
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| 3UTR-3UTR CAA 90 bp | AAACAGGAATGGGAGAACTGTCTCACGGCCCTGCCCCTTCCCAGACTCCCTTTCTCCTTCATCAGGCGATaGAACTTGGTAAACCAGTTG | + |
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Preference number: 3 (lower is better) Translates to: KQEWENCLTALPLPRLPFSFIRR*NLVNQL Trigger: CAACTGGTTTACCAAGTTCAATCGCCTGATGAAGGA...GAAAGGGAGTCTGGGAAGGGGCAGGGCCGTGAGACAGTTCTCCCATTCCTGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147517.8 |
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| 3UTR TCA 72 bp | GATAGTCATCAACCACGGGAGGTAGGTAGTGCGTCCTaGCTTTGTAGAGGAGTCTCAGGAAAGGCACCTTAC | + |
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Preference number: 3 (lower is better) Translates to: DSHQPREVGSAS*LCRGVSGKAPY Trigger: GTAAGGTGCCTTTCCTGAGACTCCTCTACAAAGTCAGGACGCACTACCTACCTCCCGTGGTTGATGACTATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
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| 3UTR CCA 72 bp | TTGTCCCATGAGGCCTTGGTCTACAGAATCACAGATTaGACAGTGCCCATCTGGCCTGGAATCCTGCAGAAA | + |
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Preference number: 3 (lower is better) Translates to: LSHEALVYRITD*TVPIWPGILQK Trigger: TTTCTGCAGGATTCCAGGCCAGATGGGCACTGTCCAATCTGTGATTCTGTAGACCAAGGCCTCATGGGACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
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| 3UTR TCA 72 bp | CCCCATCACGGAGGTAAGTGGGTGTCAGCAGCAATTTaGATACAGAACCTAGTGAGTTGTCTACAGATCCCC | + |
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Preference number: 3 (lower is better) Translates to: PHHGGKWVSAAI*IQNLVSCLQIP Trigger: GGGGATCTGTAGACAACTCACTAGGTTCTGTATTCAAATTGCTGCTGACACCCACTTACCTCCGTGATGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
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| 3UTR TCA 72 bp | AGGCTTAGAAATCAAGACCCATTGGGCAGGGGACACTaGCCTATTAACACCATCCCAGCCCATCATCCATCA | + |
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Preference number: 3 (lower is better) Translates to: RLRNQDPLGRGH*PINTIPAHHPS Trigger: TGATGGATGATGGGCTGGGATGGTGTTAATAGGTCAGTGTCCCCTGCCCAATGGGTCTTGATTTCTAAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
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| 3UTR CCA 72 bp | AAGGTTCGGAGGCCTTCCCCTGCAAATTCGCTGAGATaGTCTGATGTTAAGGACTGCAGGTCTTCATTGGAA | + |
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Preference number: 3 (lower is better) Translates to: KVRRPSPANSLR*SDVKDCRSSLE Trigger: TTCCAATGAAGACCTGCAGTCCTTAACATCAGACCATCTCAGCGAATTTGCAGGGGAAGGCCTCCGAACCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147517.8 |
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| 3UTR CCA 72 bp | CAGCCGTGTTCCCCGTTATCACAAATAGAGCATCCATaGCGTCTGTCAGCACATTGCAGGCATAACCGATAT | + |
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Preference number: 3 (lower is better) Translates to: QPCSPLSQIEHP*RLSAHCRHNRY Trigger: ATATCGGTTATGCCTGCAATGTGCTGACAGACGCCATGGATGCTCTATTTGTGATAACGGGGAACACGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147517.8 |
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| 3UTR TCA 72 bp | GGAACACTGTCAATAAAGGGCAGTGTTCTACCACGCTaGTGGTTCTGTCTGCATCCATGTAACATGCAACGG | + |
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Preference number: 3 (lower is better) Translates to: GTLSIKGSVLPR*WFCLHPCNMQR Trigger: CCGTTGCATGTTACATGGATGCAGACAGAACCATCAGCGTGGTAGAACACTGCCCTTTATTGACAGTGTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
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| 3UTR CCA 72 bp | TTGGTCTACAGAATCACAGATTGGACAGTGCCCATCTaGCCTGGAATCCTGCAGAAAACATCGCTATCTGAC | + |
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Preference number: 3 (lower is better) Translates to: LVYRITDWTVPI*PGILQKTSLSD Trigger: GTCAGATAGCGATGTTTTCTGCAGGATTCCAGGCCAGATGGGCACTGTCCAATCTGTGATTCTGTAGACCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
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| 3UTR-3UTR CAA 90 bp | GGATCTGTCAGCAGCATTTGCCCATGGCCTGCATGGAACACTGTCAATAAAGGGGACATGCGTTTTTGGTaGAAACACATCATTGGAACA | + |
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Preference number: 3 (lower is better) Translates to: GSVSSICPWPAWNTVNKGDMRFW*KHIIGT Trigger: TGTTCCAATGATGTGTTTCAACCAAAAACGCATGTC...CCCTTTATTGACAGTGTTCCATGCAGGCCATGGGCAAATGCTGCTGACAGATCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
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| 3UTR CCA 72 bp | CATACAGCCCAGATATCCGTTCATCCCTTTCCAAGGTaGCAGAATTTGCATCTTCAAGCATCTTCTGCCACA | + |
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Preference number: 3 (lower is better) Translates to: HTAQISVHPFPR*QNLHLQASSAT Trigger: TGTGGCAGAAGATGCTTGAAGATGCAAATTCTGCCACCTTGGAAAGGGATGAACGGATATCTGGGCTGTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147517.8 |
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| 3UTR GCA 72 bp | CCTGCAAATTCGCTGAGATGGTCTGATGTTAAGGACTaGAGGTCTTCATTGGAAGGATGGAGCTTTTCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: PANSLRWSDVKD*RSSLEGWSFSN Trigger: GTTTGAAAAGCTCCATCCTTCCAATGAAGACCTGCAGTCCTTAACATCAGACCATCTCAGCGAATTTGCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147517.8 |
||
| 3UTR CCA 72 bp | CTGCCTGTAGAGACTTTCAAGTTTCAAGTTTTTAAATaGGATCTGTCAGCAGCATTTGCCCATGGCCTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: LPVETFKFQVFK*DLSAAFAHGLH Trigger: ATGCAGGCCATGGGCAAATGCTGCTGACAGATCCCATTTAAAAACTTGAAACTTGAAAGTCTCTACAGGCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
||
| 3UTR TCA 72 bp | AAGATTAACAAGCTCTTTGTGCAAAGTAGTTTTGGTTaGTCAGCAATTGCCTGGGAACCCAGAGAAGGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: KINKLFVQSSFG*SAIAWEPREGR Trigger: CCTTCCTTCTCTGGGTTCCCAGGCAATTGCTGATCAACCAAAACTACTTTGCACAAAGAGCTTGTTAATCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
||
| 3UTR TCA 72 bp | CTGACCACCTACGCTATCCCCTACAAGCTGAGTGTTTaGAAGTTATCTTATCACAAACTGCATGTGCCTATT | + |
|
Preference number: 3 (lower is better) Translates to: LTTYAIPYKLSV*KLSYHKLHVPI Trigger: AATAGGCACATGCAGTTTGTGATAAGATAACTTTCAAACACTCAGCTTGTAGGGGATAGCGTAGGTGGTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147517.8 |
||
| 3UTR-3UTR CAA 90 bp | CATCAAATCCCTCTCGATTTCTTCATACAGCCCAGATATCCGTTCATCCCTTTCATCCTTTTCCGGATGTaGTTGAAATCCAAAAAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: HQIPLDFFIQPRYPFIPFILFRM*LKSKKA Trigger: TGCCTTTTTGGATTTCAACAACATCCGGAAAAGGAT...GAAAGGGATGAACGGATATCTGGGCTGTATGAAGAAATCGAGAGGGATTTGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147517.8 |
||
| 3UTR CCA 72 bp | ATGTATAGAGAAAGGAATCATGACAAGCATTTGCTATaGGTAAAGGCTCTAGGTAGTAGGCTACTGCATACC | + |
|
Preference number: 3 (lower is better) Translates to: MYRERNHDKHLL*VKALGSRLLHT Trigger: GGTATGCAGTAGCCTACTACCTAGAGCCTTTACCCATAGCAAATGCTTGTCATGATTCCTTTCTCTATACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
||
| 3UTR TCA 72 bp | AGCCTGATGAGTACATTCGTATGTGAGTTGTGTTTCTaGTGGTTTGAGAATGTGTGCTTGATAGTCATCAAC | + |
|
Preference number: 3 (lower is better) Translates to: SLMSTFVCELCF*WFENVCLIVIN Trigger: GTTGATGACTATCAAGCACACATTCTCAAACCATCAGAAACACAACTCACATACGAATGTACTCATCAGGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
||
| 3UTR TCA 72 bp | TTGGTGTTTAAGTTAATAAAATCTGTACTTGTCCCATaGGGCCTTGGTCTACAGAATCACAGATTGGACAGT | + |
|
Preference number: 3 (lower is better) Translates to: LVFKLIKSVLVP*GLGLQNHRLDS Trigger: ACTGTCCAATCTGTGATTCTGTAGACCAAGGCCTCATGGGACAAGTACAGATTTTATTAACTTAAACACCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR TCA 90 bp | GTGCCCATCTGGCCTGGAATCCTGCAGAAAACATCGCTATCTGACAGGCGTTGGCTTTCTGGAGTGGGGTaGCTCTGCAGCAAACCACAG | + |
|
Preference number: 4 (lower is better) Translates to: VPIWPGILQKTSLSDRRWLSGVG*LCSKPQ Trigger: CTGTGGTTTGCTGCAGAGTCACCCCACTCCAGAAAG...CCAACGCCTGTCAGATAGCGATGTTTTCTGCAGGATTCCAGGCCAGATGGGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR TCA 90 bp | GTGCCCATCTGGCCTGGAATCCTGCAGAAAACATCGCTATCTGACAGGCGTTGGCTCCAAGTTCTGAGGTaGCAGGTAGTGCCTGACGAA | + |
|
Preference number: 4 (lower is better) Translates to: VPIWPGILQKTSLSDRRWLQVLR*QVVPDE Trigger: TTCGTCAGGCACTACCTGTCACCTCAGAACTTGGAG...CCAACGCCTGTCAGATAGCGATGTTTTCTGCAGGATTCCAGGCCAGATGGGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR TCA 90 bp | ATGAGGCCTTGGTCTACAGAATCACAGATTGGACAGTGCCCATCTGGCCTGGAACCACCACCACTGGCATaGCTGACGTCACTGCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: MRPWSTESQIGQCPSGLEPPPLA*LTSLLS Trigger: TGACAGCAGTGACGTCAGTCATGCCAGTGGTGGTGG...TTCCAGGCCAGATGGGCACTGTCCAATCTGTGATTCTGTAGACCAAGGCCTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR TCA 90 bp | CACAGATTGGACAGTGCCCATCTGGCCTGGAATCCTGCAGAAAACATCGCTATCCCACCACCACTGGCATaGCTGACGTCACTGCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: HRLDSAHLAWNPAENIAIPPPLA*LTSLLS Trigger: TGACAGCAGTGACGTCAGTCATGCCAGTGGTGGTGG...GATAGCGATGTTTTCTGCAGGATTCCAGGCCAGATGGGCACTGTCCAATCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR GCA 90 bp | GTGCCCATCTGGCCTGGAATCCTGCAGAAAACATCGCTATCTGACAGGCGTTGGGTGTTGCCCGTCCTCTaGAGCCACATTGTAAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VPIWPGILQKTSLSDRRWVLPVL*SHIVKG Trigger: GCCTTTTACAATGTGGCTGCAGAGGACGGGCAACAC...CCAACGCCTGTCAGATAGCGATGTTTTCTGCAGGATTCCAGGCCAGATGGGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR GCA 90 bp | TGTCCCATGAGGCCTTGGTCTACAGAATCACAGATTGGACAGTGCCCATCTGGCGGGTCTGAGGCCTTCTaGTTCGCAGGGGTCTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CPMRPWSTESQIGQCPSGGSEAF*FAGVFS Trigger: AGAAAAGACCCCTGCGAAGCAGAAGGCCTCAGACCC...GCCAGATGGGCACTGTCCAATCTGTGATTCTGTAGACCAAGGCCTCATGGGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR CCA 90 bp | GTGCCCATCTGGCCTGGAATCCTGCAGAAAACATCGCTATCTGACAGGCGTTGGTGTAGTCACGGTCATTaGCTTTCACCACCCGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VPIWPGILQKTSLSDRRWCSHGH*LSPPAP Trigger: TGGAGCGGGTGGTGAAAGCCAATGACCGTGACTACA...CCAACGCCTGTCAGATAGCGATGTTTTCTGCAGGATTCCAGGCCAGATGGGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR CCA 90 bp | GTGCCCATCTGGCCTGGAATCCTGCAGAAAACATCGCTATCTGACAGGCGTTGGACTACTTGGGCTTTCTaGAGTGGGGTGACTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VPIWPGILQKTSLSDRRWTTWAF*SGVTLQ Trigger: CTGCAGAGTCACCCCACTCCAGAAAGCCCAAGTAGT...CCAACGCCTGTCAGATAGCGATGTTTTCTGCAGGATTCCAGGCCAGATGGGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR CCA 90 bp | TCACAGATTGGACAGTGCCCATCTGGCCTGGAATCCTGCAGAAAACATCGCTATTTCCAGCCCCGATGCTaGGGCTGGACTTTTCGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SQIGQCPSGLESCRKHRYFQPRC*GWTFRS Trigger: CGAGCGAAAAGTCCAGCCCCAGCATCGGGGCTGGAA...ATAGCGATGTTTTCTGCAGGATTCCAGGCCAGATGGGCACTGTCCAATCTGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR TCA 90 bp | GAATCACAGATTGGACAGTGCCCATCTGGCCTGGAATCCTGCAGAAAACATCGCCTTTCTGGAGTGGGGTaGCTCTGCAGCAAACCACAG | + |
|
Preference number: 4 (lower is better) Translates to: ESQIGQCPSGLESCRKHRLSGVG*LCSKPQ Trigger: CTGTGGTTTGCTGCAGAGTCACCCCACTCCAGAAAG...GCGATGTTTTCTGCAGGATTCCAGGCCAGATGGGCACTGTCCAATCTGTGATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR TCA 90 bp | GTGCCCATCTGGCCTGGAATCCTGCAGAAAACATCGCTATCTGACAGGCGTTGGTTCACTGTCTTATCATaGCTAAAGCCGCTCACCGCG | + |
|
Preference number: 4 (lower is better) Translates to: VPIWPGILQKTSLSDRRWFTVLS*LKPLTA Trigger: CGCGGTGAGCGGCTTTAGTCATGATAAGACAGTGAA...CCAACGCCTGTCAGATAGCGATGTTTTCTGCAGGATTCCAGGCCAGATGGGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR GCA 90 bp | ATGAGGCCTTGGTCTACAGAATCACAGATTGGACAGTGCCCATCTGGCCTGGAAAGGTCAGCAATGTGTTaGCCGTCCTCTGCAGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: MRPWSTESQIGQCPSGLERSAMC*PSSAAT Trigger: TGTGGCTGCAGAGGACGGGCAACACATTGCTGACCT...TTCCAGGCCAGATGGGCACTGTCCAATCTGTGATTCTGTAGACCAAGGCCTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR GCA 90 bp | GGATCTGTCAGCAGCATTTGCCCATGGCCTGCATGGAACACTGTCAATAAAGGGGGGTCTGAGGCCTTCTaGTTCGCAGGGGTCTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GSVSSICPWPAWNTVNKGGSEAF*FAGVFS Trigger: AGAAAAGACCCCTGCGAAGCAGAAGGCCTCAGACCC...CCCTTTATTGACAGTGTTCCATGCAGGCCATGGGCAAATGCTGCTGACAGATCC 53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
||
| CDS-3UTR CCA 90 bp | GCCTTGGTCTACAGAATCACAGATTGGACAGTGCCCATCTGGCCTGGAATCCTGTGTAGTCACGGTCATTaGCTTTCACCACCCGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ALVYRITDWTVPIWPGILCSHGH*LSPPAP Trigger: TGGAGCGGGTGGTGAAAGCCAATGACCGTGACTACA...CAGGATTCCAGGCCAGATGGGCACTGTCCAATCTGTGATTCTGTAGACCAAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR CCA 90 bp | GCCTTGGTCTACAGAATCACAGATTGGACAGTGCCCATCTGGCCTGGAATCCTGACTACTTGGGCTTTCTaGAGTGGGGTGACTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ALVYRITDWTVPIWPGILTTWAF*SGVTLQ Trigger: CTGCAGAGTCACCCCACTCCAGAAAGCCCAAGTAGT...CAGGATTCCAGGCCAGATGGGCACTGTCCAATCTGTGATTCTGTAGACCAAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR CCA 90 bp | GTGCCCATCTGGCCTGGAATCCTGCAGAAAACATCGCTATCTGACAGGCGTTGGACCAACTCTACTACTTaGGCTTTCTGGAGTGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VPIWPGILQKTSLSDRRWTNSTT*AFWSGV Trigger: CACCCCACTCCAGAAAGCCCAAGTAGTAGAGTTGGT...CCAACGCCTGTCAGATAGCGATGTTTTCTGCAGGATTCCAGGCCAGATGGGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR CCA 90 bp | TTAAATGGGATCTGTCAGCAGCATTTGCCCATGGCCTGCATGGAACACTGTCAATTCCAGCCCCGATGCTaGGGCTGGACTTTTCGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LNGICQQHLPMACMEHCQFQPRC*GWTFRS Trigger: CGAGCGAAAAGTCCAGCCCCAGCATCGGGGCTGGAA...TTGACAGTGTTCCATGCAGGCCATGGGCAAATGCTGCTGACAGATCCCATTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
||
| CDS-3UTR TCA 90 bp | TCACAGATTGGACAGTGCCCATCTGGCCTGGAATCCTGCAGAAAACATCGCTATGTCCTTCCTGACCACTaGTGCCAATGCCAATGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SQIGQCPSGLESCRKHRYVLPDH*CQCQCG Trigger: CCCACATTGGCATTGGCATCAGTGGTCAGGAAGGAC...ATAGCGATGTTTTCTGCAGGATTCCAGGCCAGATGGGCACTGTCCAATCTGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR TCA 90 bp | GATTGGACAGTGCCCATCTGGCCTGGAATCCTGCAGAAAACATCGCTATCTGACAGGCCCCGTAGGGAATaGAGAAAAGGGCTAATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: DWTVPIWPGILQKTSLSDRPRRE*RKGLMR Trigger: CCTCATTAGCCCTTTTCTTCATTCCCTACGGGGCCT...GTCAGATAGCGATGTTTTCTGCAGGATTCCAGGCCAGATGGGCACTGTCCAATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR TCA 90 bp | CTGTACTTGTCCCATGAGGCCTTGGTCTACAGAATCACAGATTGGACAGTGCCCAGGCCCCGTAGGGAATaGAGAAAAGGGCTAATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LYLSHEALVYRITDWTVPRPRRE*RKGLMR Trigger: CCTCATTAGCCCTTTTCTTCATTCCCTACGGGGCCT...GGGCACTGTCCAATCTGTGATTCTGTAGACCAAGGCCTCATGGGACAAGTACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR GCA 90 bp | GGATCTGTCAGCAGCATTTGCCCATGGCCTGCATGGAACACTGTCAATAAAGGGGTGTTGCCCGTCCTCTaGAGCCACATTGTAAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GSVSSICPWPAWNTVNKGVLPVL*SHIVKG Trigger: GCCTTTTACAATGTGGCTGCAGAGGACGGGCAACAC...CCCTTTATTGACAGTGTTCCATGCAGGCCATGGGCAAATGCTGCTGACAGATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
||
| CDS-3UTR CCA 90 bp | GTGCGAGTAAGCGAAGGAATTCATGGACTTTGGGGTCCCCCAGCTCAATGGATTTGTAGTCACGGTCATTaGCTTTCACCACCCGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VRVSEGIHGLWGPPAQWICSHGH*LSPPAP Trigger: TGGAGCGGGTGGTGAAAGCCAATGACCGTGACTACA...AATCCATTGAGCTGGGGGACCCCAAAGTCCATGAATTCCTTCGCTTACTCGCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147517.8 |
||
| CDS-3UTR CCA 90 bp | ATGAGGCCTTGGTCTACAGAATCACAGATTGGACAGTGCCCATCTGGCCTGGAAATAACAGAGACCGTGTaGCTCACTGCTCGACAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: MRPWSTESQIGQCPSGLEITETV*LTARQE Trigger: CTCCTGTCGAGCAGTGAGCCACACGGTCTCTGTTAT...TTCCAGGCCAGATGGGCACTGTCCAATCTGTGATTCTGTAGACCAAGGCCTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR CCA 90 bp | GATTGGACAGTGCCCATCTGGCCTGGAATCCTGCAGAAAACATCGCTATCTGACGGAATTCATGGACTTTaGGGTCCCCCAGCTCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: DWTVPIWPGILQKTSLSDGIHGL*GPPAQW Trigger: CCATTGAGCTGGGGGACCCCAAAGTCCATGAATTCC...GTCAGATAGCGATGTTTTCTGCAGGATTCCAGGCCAGATGGGCACTGTCCAATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR CCA 90 bp | ATGAGGCCTTGGTCTACAGAATCACAGATTGGACAGTGCCCATCTGGCCTGGAAGGAATTCATGGACTTTaGGGTCCCCCAGCTCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: MRPWSTESQIGQCPSGLEGIHGL*GPPAQW Trigger: CCATTGAGCTGGGGGACCCCAAAGTCCATGAATTCC...TTCCAGGCCAGATGGGCACTGTCCAATCTGTGATTCTGTAGACCAAGGCCTCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR CCA 90 bp | GTGCCCATCTGGCCTGGAATCCTGCAGAAAACATCGCTATCTGACAGGCGTTGGGCATGGGCCAAACTGTaGCCATTTATGACTAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VPIWPGILQKTSLSDRRWAWAKL*PFMTKA Trigger: TGCCTTAGTCATAAATGGCCACAGTTTGGCCCATGC...CCAACGCCTGTCAGATAGCGATGTTTTCTGCAGGATTCCAGGCCAGATGGGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR CCA 90 bp | TCCCATGAGGCCTTGGTCTACAGAATCACAGATTGGACAGTGCCCATCTGGCCTACCAACTCTACTACTTaGGCTTTCTGGAGTGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SHEALVYRITDWTVPIWPTNSTT*AFWSGV Trigger: CACCCCACTCCAGAAAGCCCAAGTAGTAGAGTTGGT...AGGCCAGATGGGCACTGTCCAATCTGTGATTCTGTAGACCAAGGCCTCATGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR TCA 90 bp | ATGAGGCCTTGGTCTACAGAATCACAGATTGGACAGTGCCCATCTGGCCTGGAATTCACTGTCTTATCATaGCTAAAGCCGCTCACCGCG | + |
|
Preference number: 4 (lower is better) Translates to: MRPWSTESQIGQCPSGLEFTVLS*LKPLTA Trigger: CGCGGTGAGCGGCTTTAGTCATGATAAGACAGTGAA...TTCCAGGCCAGATGGGCACTGTCCAATCTGTGATTCTGTAGACCAAGGCCTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR GCA 90 bp | TCACAGATTGGACAGTGCCCATCTGGCCTGGAATCCTGCAGAAAACATCGCTATTGGTTGCTGAGGGCATaGTTGCTGTCCTTCCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SQIGQCPSGLESCRKHRYWLLRA*LLSFQE Trigger: CTCTTGGAAGGACAGCAAGCATGCCCTCAGCAACCA...ATAGCGATGTTTTCTGCAGGATTCCAGGCCAGATGGGCACTGTCCAATCTGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR GCA 90 bp | TGCAAAGTAGTTTTGGTTGATCAGCAATTGCCTGGGAACCCAGAGAAGGAAGGCAGGTCAGCAATGTGTTaGCCGTCCTCTGCAGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: CKVVLVDQQLPGNPEKEGRSAMC*PSSAAT Trigger: TGTGGCTGCAGAGGACGGGCAACACATTGCTGACCT...GCCTTCCTTCTCTGGGTTCCCAGGCAATTGCTGATCAACCAAAACTACTTTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
||
| CDS-3UTR CCA 90 bp | TCACAGATTGGACAGTGCCCATCTGGCCTGGAATCCTGCAGAAAACATCGCTATTTGGGCTTTCTGGAGTaGGGTGACTCTGCAGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SQIGQCPSGLESCRKHRYLGFLE*GDSAAN Trigger: GTTTGCTGCAGAGTCACCCCACTCCAGAAAGCCCAA...ATAGCGATGTTTTCTGCAGGATTCCAGGCCAGATGGGCACTGTCCAATCTGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR CCA 90 bp | CTGTACTTGTCCCATGAGGCCTTGGTCTACAGAATCACAGATTGGACAGTGCCCTGGCCCCATCACCAATaGCCAAAGTCACAGCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: LYLSHEALVYRITDWTVPWPHHQ*PKSQHF Trigger: GAAATGCTGTGACTTTGGCCATTGGTGATGGGGCCA...GGGCACTGTCCAATCTGTGATTCTGTAGACCAAGGCCTCATGGGACAAGTACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR CCA 90 bp | TGTCCCATGAGGCCTTGGTCTACAGAATCACAGATTGGACAGTGCCCATCTGGCGTAACTGCAAAGGACTaGAGGTCAGCAATGTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: CPMRPWSTESQIGQCPSGVTAKD*RSAMCC Trigger: GCAACACATTGCTGACCTCCAGTCCTTTGCAGTTAC...GCCAGATGGGCACTGTCCAATCTGTGATTCTGTAGACCAAGGCCTCATGGGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR TCA 90 bp | ATCTGTACTTGTCCCATGAGGCCTTGGTCTACAGAATCACAGATTGGACAGTGCCTCCAAGTTCTGAGGTaGCAGGTAGTGCCTGACGAA | + |
|
Preference number: 4 (lower is better) Translates to: ICTCPMRPWSTESQIGQCLQVLR*QVVPDE Trigger: TTCGTCAGGCACTACCTGTCACCTCAGAACTTGGAG...GCACTGTCCAATCTGTGATTCTGTAGACCAAGGCCTCATGGGACAAGTACAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR TCA 90 bp | TCACAGATTGGACAGTGCCCATCTGGCCTGGAATCCTGCAGAAAACATCGCTATTTATCTTCTGGTTGCTaGGGGCATGCTTGCTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SQIGQCPSGLESCRKHRYLSSGC*GHACCP Trigger: AGGACAGCAAGCATGCCCTCAGCAACCAGAAGATAA...ATAGCGATGTTTTCTGCAGGATTCCAGGCCAGATGGGCACTGTCCAATCTGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR GCA 90 bp | TTAAATGGGATCTGTCAGCAGCATTTGCCCATGGCCTGCATGGAACACTGTCAATGGTTGCTGAGGGCATaGTTGCTGTCCTTCCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LNGICQQHLPMACMEHCQWLLRA*LLSFQE Trigger: CTCTTGGAAGGACAGCAAGCATGCCCTCAGCAACCA...TTGACAGTGTTCCATGCAGGCCATGGGCAAATGCTGCTGACAGATCCCATTTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
||
| CDS-3UTR GCA 90 bp | CACAGATTGGACAGTGCCCATCTGGCCTGGAATCCTGCAGAAAACATCGCTATCAAGGCAAACCAGAAGTaGACAAGGGTGAACGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: HRLDSAHLAWNPAENIAIKANQK*TRVNAK Trigger: CTTTGCGTTCACCCTTGTGCACTTCTGGTTTGCCTT...GATAGCGATGTTTTCTGCAGGATTCCAGGCCAGATGGGCACTGTCCAATCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR CCA 90 bp | TGTCCCATGAGGCCTTGGTCTACAGAATCACAGATTGGACAGTGCCCATCTGGCTCTGACATTACAGTATaGCAGAGTGCGAGTAAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: CPMRPWSTESQIGQCPSGSDITV*QSASKR Trigger: TCGCTTACTCGCACTCTGCCATACTGTAATGTCAGA...GCCAGATGGGCACTGTCCAATCTGTGATTCTGTAGACCAAGGCCTCATGGGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR CCA 90 bp | GGATCTGTCAGCAGCATTTGCCCATGGCCTGCATGGAACACTGTCAATAAAGGGGCATGGGCCAAACTGTaGCCATTTATGACTAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GSVSSICPWPAWNTVNKGAWAKL*PFMTKA Trigger: TGCCTTAGTCATAAATGGCCACAGTTTGGCCCATGC...CCCTTTATTGACAGTGTTCCATGCAGGCCATGGGCAAATGCTGCTGACAGATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
||
| CDS-3UTR TCA 90 bp | GGCAGAGTGCGAGTAAGCGAAGGAATTCATGGACTTTGGGGTCCCCCAGCTCAAAAGAGATTTCTGGAATaGGCTGTAGTATCAGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GRVRVSEGIHGLWGPPAQKRFLE*AVVSEG Trigger: TCCTTCTGATACTACAGCTCATTCCAGAAATCTCTT...TTGAGCTGGGGGACCCCAAAGTCCATGAATTCCTTCGCTTACTCGCACTCTGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000147517.8 |
||
| CDS-3UTR TCA 90 bp | TGCAAAGTAGTTTTGGTTGATCAGCAATTGCCTGGGAACCCAGAGAAGGAAGGCTTATCTTCTGGTTGCTaGGGGCATGCTTGCTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: CKVVLVDQQLPGNPEKEGLSSGC*GHACCP Trigger: AGGACAGCAAGCATGCCCTCAGCAACCAGAAGATAA...GCCTTCCTTCTCTGGGTTCCCAGGCAATTGCTGATCAACCAAAACTACTTTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
||
| CDS-3UTR TCA 90 bp | CTCTCGATTTCTTCATACAGCCCAGATATCCGTTCATCCCTTTCCAAGGTGGCATTATCTTCTGGTTGCTaGGGGCATGCTTGCTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LSISSYSPDIRSSLSKVALSSGC*GHACCP Trigger: AGGACAGCAAGCATGCCCTCAGCAACCAGAAGATAA...TGCCACCTTGGAAAGGGATGAACGGATATCTGGGCTGTATGAAGAAATCGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147517.8 |
||
| CDS-3UTR TCA 90 bp | TCACAGATTGGACAGTGCCCATCTGGCCTGGAATCCTGCAGAAAACATCGCTATTTTCCTTTGCTTTCCTaGGTTCTTCTCGCACTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SQIGQCPSGLESCRKHRYFPLLS*VLLALP Trigger: GGGAAGTGCGAGAAGAACTCAGGAAAGCAAAGGAAA...ATAGCGATGTTTTCTGCAGGATTCCAGGCCAGATGGGCACTGTCCAATCTGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR CCA 90 bp | ATCTGTACTTGTCCCATGAGGCCTTGGTCTACAGAATCACAGATTGGACAGTGCGGTCCCCCAGCTCAATaGATTCCATTAGACTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ICTCPMRPWSTESQIGQCGPPAQ*IPLDSG Trigger: ACCAGAGTCTAATGGAATCCATTGAGCTGGGGGACC...GCACTGTCCAATCTGTGATTCTGTAGACCAAGGCCTCATGGGACAAGTACAGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR CCA 90 bp | TCCCATGAGGCCTTGGTCTACAGAATCACAGATTGGACAGTGCCCATCTGGCCTATGCCAATGCCAATGTaGGCACTTTTAATCATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SHEALVYRITDWTVPIWPMPMPM*ALLIML Trigger: CAGCATGATTAAAAGTGCCCACATTGGCATTGGCAT...AGGCCAGATGGGCACTGTCCAATCTGTGATTCTGTAGACCAAGGCCTCATGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR CCA 90 bp | CACAGATTGGACAGTGCCCATCTGGCCTGGAATCCTGCAGAAAACATCGCTATCGCATGGCCAGTAAAATaGAGAAATAGGTGGCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: HRLDSAHLAWNPAENIAIAWPVK*RNRWQH Trigger: GTGTTGCCACCTATTTCTCCATTTTACTGGCCATGC...GATAGCGATGTTTTCTGCAGGATTCCAGGCCAGATGGGCACTGTCCAATCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR TCA 90 bp | GTGCCCATCTGGCCTGGAATCCTGCAGAAAACATCGCTATCTGACAGGCGTTGGTTTTCCGGATGTTGTTaGAATCCAAAAAGGCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: VPIWPGILQKTSLSDRRWFSGCC*NPKRQV Trigger: TACTTGCCTTTTTGGATTTCAACAACATCCGGAAAA...CCAACGCCTGTCAGATAGCGATGTTTTCTGCAGGATTCCAGGCCAGATGGGCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR TCA 90 bp | GAATCACAGATTGGACAGTGCCCATCTGGCCTGGAATCCTGCAGAAAACATCGCAACTGTGGCCATTTATaGCTAAGGCATATTCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ESQIGQCPSGLESCRKHRNCGHL*LRHILL Trigger: CAGGAGAATATGCCTTAGTCATAAATGGCCACAGTT...GCGATGTTTTCTGCAGGATTCCAGGCCAGATGGGCACTGTCCAATCTGTGATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR GCA 90 bp | GTGCCCATCTGGCCTGGAATCCTGCAGAAAACATCGCTATCTGACAGGCGTTGGTTTAGTGTCTGGACCTaGAAAAAGAACCATTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VPIWPGILQKTSLSDRRWFSVWT*KKNHSK Trigger: TTTGGAATGGTTCTTTTTGCAGGTCCAGACACTAAA...CCAACGCCTGTCAGATAGCGATGTTTTCTGCAGGATTCCAGGCCAGATGGGCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR GCA 90 bp | TGTCCCATGAGGCCTTGGTCTACAGAATCACAGATTGGACAGTGCCCATCTGGCGTCTTACCACTGTTCTaGATTAGTTTAGTGTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: CPMRPWSTESQIGQCPSGVLPLF*ISLVSG Trigger: TCCAGACACTAAACTAATGCAGAACAGTGGTAAGAC...GCCAGATGGGCACTGTCCAATCTGTGATTCTGTAGACCAAGGCCTCATGGGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR GCA 90 bp | ATGAGGCCTTGGTCTACAGAATCACAGATTGGACAGTGCCCATCTGGCCTGGAATCTGATGTTAAGGACTaGAGGTCTTCATTGGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: MRPWSTESQIGQCPSGLESDVKD*RSSLEG Trigger: TCCTTCCAATGAAGACCTGCAGTCCTTAACATCAGA...TTCCAGGCCAGATGGGCACTGTCCAATCTGTGATTCTGTAGACCAAGGCCTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR GCA 90 bp | TTAAATGGGATCTGTCAGCAGCATTTGCCCATGGCCTGCATGGAACACTGTCAAAAGGCAAACCAGAAGTaGACAAGGGTGAACGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LNGICQQHLPMACMEHCQKANQK*TRVNAK Trigger: CTTTGCGTTCACCCTTGTGCACTTCTGGTTTGCCTT...TTGACAGTGTTCCATGCAGGCCATGGGCAAATGCTGCTGACAGATCCCATTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
||
| CDS-3UTR GCA 90 bp | TCCCATGAGGCCTTGGTCTACAGAATCACAGATTGGACAGTGCCCATCTGGCCTGCTGAGGATAGTCCATaGTGTTCTGTTCATTTATGT | + |
|
Preference number: 4 (lower is better) Translates to: SHEALVYRITDWTVPIWPAEDSP*CSVHLC Trigger: ACATAAATGAACAGAACAGCATGGACTATCCTCAGC...AGGCCAGATGGGCACTGTCCAATCTGTGATTCTGTAGACCAAGGCCTCATGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR GCA 90 bp | TCCCATGAGGCCTTGGTCTACAGAATCACAGATTGGACAGTGCCCATCTGGCCTGGTGTAGATTCCATGTaGCACACAGATGAAAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: SHEALVYRITDWTVPIWPGVDSM*HTDEKS Trigger: AGATTTTTCATCTGTGTGGCACATGGAATCTACACC...AGGCCAGATGGGCACTGTCCAATCTGTGATTCTGTAGACCAAGGCCTCATGGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR CCA 90 bp | TTAAATGGGATCTGTCAGCAGCATTTGCCCATGGCCTGCATGGAACACTGTCAACCAATGCATAGTCACTaGCTAAGACTGCTTGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LNGICQQHLPMACMEHCQPMHSH*LRLLAV Trigger: GACTGCAAGCAGTCTTAGCCAGTGACTATGCATTGG...TTGACAGTGTTCCATGCAGGCCATGGGCAAATGCTGCTGACAGATCCCATTTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
||
| CDS-3UTR CCA 90 bp | ATCTGTACTTGTCCCATGAGGCCTTGGTCTACAGAATCACAGATTGGACAGTGCCCAATGCATAGTCACTaGCTAAGACTGCTTGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: ICTCPMRPWSTESQIGQCPMHSH*LRLLAV Trigger: GACTGCAAGCAGTCTTAGCCAGTGACTATGCATTGG...GCACTGTCCAATCTGTGATTCTGTAGACCAAGGCCTCATGGGACAAGTACAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR CCA 90 bp | TCACAGATTGGACAGTGCCCATCTGGCCTGGAATCCTGCAGAAAACATCGCTATGCATGGCCAGTAAAATaGAGAAATAGGTGGCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: SQIGQCPSGLESCRKHRYAWPVK*RNRWQH Trigger: GTGTTGCCACCTATTTCTCCATTTTACTGGCCATGC...ATAGCGATGTTTTCTGCAGGATTCCAGGCCAGATGGGCACTGTCCAATCTGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR CCA 90 bp | CACAGATTGGACAGTGCCCATCTGGCCTGGAATCCTGCAGAAAACATCGCTATCCACCATCACTGTGCATaGCCAGTAAAATGGAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: HRLDSAHLAWNPAENIAIHHHCA*PVKWRN Trigger: ATTTCTCCATTTTACTGGCCATGCACAGTGATGGTG...GATAGCGATGTTTTCTGCAGGATTCCAGGCCAGATGGGCACTGTCCAATCTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR TCA 90 bp | TTTGTCCCCACATGGAACAGTCTGAACACTCTCTCTATAAACCTAACCATGTTAGTCCTTCCTGACCACTaGTGCCAATGCCAATGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: FVPTWNSLNTLSINLTMLVLPDH*CQCQCG Trigger: CCCACATTGGCATTGGCATCAGTGGTCAGGAAGGAC...TAACATGGTTAGGTTTATAGAGAGAGTGTTCAGACTGTTCCATGTGGGGACAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
||
| CDS-3UTR GCA 90 bp | GTGCCCATCTGGCCTGGAATCCTGCAGAAAACATCGCTATCTGACAGGCGTTGGATCCATTTTTCATTCTaGAGTTTGCTATTGATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VPIWPGILQKTSLSDRRWIHFSF*SLLLMS Trigger: GCTCATCAATAGCAAACTGCAGAATGAAAAATGGAT...CCAACGCCTGTCAGATAGCGATGTTTTCTGCAGGATTCCAGGCCAGATGGGCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR GCA 90 bp | TGTCCCATGAGGCCTTGGTCTACAGAATCACAGATTGGACAGTGCCCATCTGGCTTTAGTGTCTGGACCTaGAAAAAGAACCATTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: CPMRPWSTESQIGQCPSGFSVWT*KKNHSK Trigger: TTTGGAATGGTTCTTTTTGCAGGTCCAGACACTAAA...GCCAGATGGGCACTGTCCAATCTGTGATTCTGTAGACCAAGGCCTCATGGGACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR GCA 90 bp | CTTGGTCTACAGAATCACAGATTGGACAGTGCCCATCTGGCCTGGAATCCTGCAGCTGAGGATAGTCCATaGTGTTCTGTTCATTTATGT | + |
|
Preference number: 4 (lower is better) Translates to: LGLQNHRLDSAHLAWNPAAEDSP*CSVHLC Trigger: ACATAAATGAACAGAACAGCATGGACTATCCTCAGC...TGCAGGATTCCAGGCCAGATGGGCACTGTCCAATCTGTGATTCTGTAGACCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR GCA 90 bp | CACAGATTGGACAGTGCCCATCTGGCCTGGAATCCTGCAGAAAACATCGCTATCGGTGTAGATTCCATGTaGCACACAGATGAAAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: HRLDSAHLAWNPAENIAIGVDSM*HTDEKS Trigger: AGATTTTTCATCTGTGTGGCACATGGAATCTACACC...GATAGCGATGTTTTCTGCAGGATTCCAGGCCAGATGGGCACTGTCCAATCTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR CCA 90 bp | TTGCTTTCTATCATACTTAGCAACCTCATTTCTTTGACAGTCCCACTGGCGACTATAACAGAGACCGTGTaGCTCACTGCTCGACAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLSIILSNLISLTVPLATITETV*LTARQE Trigger: CTCCTGTCGAGCAGTGAGCCACACGGTCTCTGTTAT...AGTCGCCAGTGGGACTGTCAAAGAAATGAGGTTGCTAAGTATGATAGAAAGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
||
| CDS-3UTR CCA 90 bp | GCCTTGGTCTACAGAATCACAGATTGGACAGTGCCCATCTGGCCTGGAATCCTGGATTCCATTAGACTCTaGTCAAAGAAATGCAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: ALVYRITDWTVPIWPGILDSIRL*SKKCSV Trigger: AACACTGCATTTCTTTGACCAGAGTCTAATGGAATC...CAGGATTCCAGGCCAGATGGGCACTGTCCAATCTGTGATTCTGTAGACCAAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR CCA 90 bp | TCCCATGAGGCCTTGGTCTACAGAATCACAGATTGGACAGTGCCCATCTGGCCTTTTTATACGTCCTTCTaGGTTTCGAACTATGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: SHEALVYRITDWTVPIWPFYTSF*VSNYDR Trigger: TCTGTCATAGTTCGAAACCCAGAAGGACGTATAAAA...AGGCCAGATGGGCACTGTCCAATCTGTGATTCTGTAGACCAAGGCCTCATGGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR CCA 90 bp | GAATCACAGATTGGACAGTGCCCATCTGGCCTGGAATCCTGCAGAAAACATCGCAAACTGCATGTCCATTaGAAAAACTCGTGCTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: ESQIGQCPSGLESCRKHRKLHVH*KNSCFV Trigger: GACAAAGCACGAGTTTTTCCAATGGACATGCAGTTT...GCGATGTTTTCTGCAGGATTCCAGGCCAGATGGGCACTGTCCAATCTGTGATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR CCA 90 bp | CTTGGTCTACAGAATCACAGATTGGACAGTGCCCATCTGGCCTGGAATCCTGCAAAACTGCATGTCCATTaGAAAAACTCGTGCTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LGLQNHRLDSAHLAWNPAKLHVH*KNSCFV Trigger: GACAAAGCACGAGTTTTTCCAATGGACATGCAGTTT...TGCAGGATTCCAGGCCAGATGGGCACTGTCCAATCTGTGATTCTGTAGACCAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR CCA 90 bp | AGCAATTTGAATACAGAACCTAGTGAGTTGTCTACAGATCCCCAAATTGGGCTGTTGGGCTTTCTGGAGTaGGGTGACTCTGCAGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SNLNTEPSELSTDPQIGLLGFLE*GDSAAN Trigger: GTTTGCTGCAGAGTCACCCCACTCCAGAAAGCCCAA...CAGCCCAATTTGGGGATCTGTAGACAACTCACTAGGTTCTGTATTCAAATTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
||
| CDS-3UTR TCA 90 bp | TACTTGTCCCATGAGGCCTTGGTCTACAGAATCACAGATTGGACAGTGCCCATCAAGAGATTTCTGGAATaGGCTGTAGTATCAGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: YLSHEALVYRITDWTVPIKRFLE*AVVSEG Trigger: TCCTTCTGATACTACAGCTCATTCCAGAAATCTCTT...GATGGGCACTGTCCAATCTGTGATTCTGTAGACCAAGGCCTCATGGGACAAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR GCA 90 bp | ACCTGGGAAATGTTGGAGGCCCGAAGGCAATGCCTCGTTGCCAATATCAACCCTATCCATTTTTCATTCTaGAGTTTGCTATTGATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TWEMLEARRQCLVANINPIHFSF*SLLLMS Trigger: GCTCATCAATAGCAAACTGCAGAATGAAAAATGGAT...AGGGTTGATATTGGCAACGAGGCATTGCCTTCGGGCCTCCAACATTTCCCAGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147517.8 |
||
| CDS-3UTR CCA 90 bp | GGATCTGTCAGCAGCATTTGCCCATGGCCTGCATGGAACACTGTCAATAAAGGGGATTCCATTAGACTCTaGTCAAAGAAATGCAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GSVSSICPWPAWNTVNKGDSIRL*SKKCSV Trigger: AACACTGCATTTCTTTGACCAGAGTCTAATGGAATC...CCCTTTATTGACAGTGTTCCATGCAGGCCATGGGCAAATGCTGCTGACAGATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
||
| CDS-3UTR CCA 90 bp | TTGCTTTCTATCATACTTAGCAACCTCATTTCTTTGACAGTCCCACTGGCGACTTGGCCCCATCACCAATaGCCAAAGTCACAGCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLSIILSNLISLTVPLATWPHHQ*PKSQHF Trigger: GAAATGCTGTGACTTTGGCCATTGGTGATGGGGCCA...AGTCGCCAGTGGGACTGTCAAAGAAATGAGGTTGCTAAGTATGATAGAAAGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
||
| CDS-3UTR CCA 90 bp | ATCTGTACTTGTCCCATGAGGCCTTGGTCTACAGAATCACAGATTGGACAGTGCATGCCAATGCCAATGTaGGCACTTTTAATCATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ICTCPMRPWSTESQIGQCMPMPM*ALLIML Trigger: CAGCATGATTAAAAGTGCCCACATTGGCATTGGCAT...GCACTGTCCAATCTGTGATTCTGTAGACCAAGGCCTCATGGGACAAGTACAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| 3UTR CAA 72 bp | TATTTGCTTTCTATCATACTTAGCAACCTCATTTCTTaGACAGTCCCACTGGCGACTGGCATCCCAGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: YLLSIILSNLIS*TVPLATGIPGP Trigger: AGGACCTGGGATGCCAGTCGCCAGTGGGACTGTCAAAGAAATGAGGTTGCTAAGTATGATAGAAAGCAAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
||
| CDS-3UTR TCA 90 bp | TCTGAGCATGTAAGGCTTTGTTATCCTGGCAAGGGGAGCTCAAGTCTAGAGAAAAACTGTGGCCATTTATaGCTAAGGCATATTCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SEHVRLCYPGKGSSSLEKNCGHL*LRHILL Trigger: CAGGAGAATATGCCTTAGTCATAAATGGCCACAGTT...TTTCTCTAGACTTGAGCTCCCCTTGCCAGGATAACAAAGCCTTACATGCTCAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
||
| CDS-3UTR GCA 90 bp | ATGAGGCCTTGGTCTACAGAATCACAGATTGGACAGTGCCCATCTGGCCTGGAAATCCATTTTTCATTCTaGAGTTTGCTATTGATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: MRPWSTESQIGQCPSGLEIHFSF*SLLLMS Trigger: GCTCATCAATAGCAAACTGCAGAATGAAAAATGGAT...TTCCAGGCCAGATGGGCACTGTCCAATCTGTGATTCTGTAGACCAAGGCCTCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR GCA 90 bp | ATCTGTACTTGTCCCATGAGGCCTTGGTCTACAGAATCACAGATTGGACAGTGCGTCTTACCACTGTTCTaGATTAGTTTAGTGTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ICTCPMRPWSTESQIGQCVLPLF*ISLVSG Trigger: TCCAGACACTAAACTAATGCAGAACAGTGGTAAGAC...GCACTGTCCAATCTGTGATTCTGTAGACCAAGGCCTCATGGGACAAGTACAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR GCA 90 bp | AGCCCAGATATCCGTTCATCCCTTTCCAAGGTGGCAGAATTTGCATCTTCAAGCGTCTTACCACTGTTCTaGATTAGTTTAGTGTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SPDIRSSLSKVAEFASSSVLPLF*ISLVSG Trigger: TCCAGACACTAAACTAATGCAGAACAGTGGTAAGAC...GCTTGAAGATGCAAATTCTGCCACCTTGGAAAGGGATGAACGGATATCTGGGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147517.8 |
||
| CDS-3UTR GCA 90 bp | CACAGATTGGACAGTGCCCATCTGGCCTGGAATCCTGCAGAAAACATCGCTATCCATTGGAAAAACTCGTaGTTTGTCCAAGCAAATTTT | + |
|
Preference number: 4 (lower is better) Translates to: HRLDSAHLAWNPAENIAIHWKNS*FVQANF Trigger: AAAATTTGCTTGGACAAAGCACGAGTTTTTCCAATG...GATAGCGATGTTTTCTGCAGGATTCCAGGCCAGATGGGCACTGTCCAATCTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR CCA 90 bp | TCACAGATTGGACAGTGCCCATCTGGCCTGGAATCCTGCAGAAAACATCGCTATGTTATTTCTTTCTTCTaGATTGGGTCATCTAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: SQIGQCPSGLESCRKHRYVISFF*IGSSST Trigger: AGTGCTAGATGACCCAATCCAGAAGAAAGAAATAAC...ATAGCGATGTTTTCTGCAGGATTCCAGGCCAGATGGGCACTGTCCAATCTGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR CCA 90 bp | TCACAGATTGGACAGTGCCCATCTGGCCTGGAATCCTGCAGAAAACATCGCTATTTTTATACGTCCTTCTaGGTTTCGAACTATGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: SQIGQCPSGLESCRKHRYFYTSF*VSNYDR Trigger: TCTGTCATAGTTCGAAACCCAGAAGGACGTATAAAA...ATAGCGATGTTTTCTGCAGGATTCCAGGCCAGATGGGCACTGTCCAATCTGTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR CCA 90 bp | ATCTGTACTTGTCCCATGAGGCCTTGGTCTACAGAATCACAGATTGGACAGTGCCGCTCACCGCGTCTGTaGTTTTCTTACATAAATTTT | + |
|
Preference number: 4 (lower is better) Translates to: ICTCPMRPWSTESQIGQCRSPRL*FSYINF Trigger: AAAATTTATGTAAGAAAACCACAGACGCGGTGAGCG...GCACTGTCCAATCTGTGATTCTGTAGACCAAGGCCTCATGGGACAAGTACAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR TCA 90 bp | TTAAATGGGATCTGTCAGCAGCATTTGCCCATGGCCTGCATGGAACACTGTCAATTTTCCGGATGTTGTTaGAATCCAAAAAGGCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LNGICQQHLPMACMEHCQFSGCC*NPKRQV Trigger: TACTTGCCTTTTTGGATTTCAACAACATCCGGAAAA...TTGACAGTGTTCCATGCAGGCCATGGGCAAATGCTGCTGACAGATCCCATTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
||
| CDS-3UTR TCA 90 bp | TTTGTCCCCACATGGAACAGTCTGAACACTCTCTCTATAAACCTAACCATGTTATTTCCTTTGCTTTCCTaGGTTCTTCTCGCACTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: FVPTWNSLNTLSINLTMLFPLLS*VLLALP Trigger: GGGAAGTGCGAGAAGAACTCAGGAAAGCAAAGGAAA...TAACATGGTTAGGTTTATAGAGAGAGTGTTCAGACTGTTCCATGTGGGGACAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
||
| CDS-3UTR GCA 90 bp | AGCCCAGATATCCGTTCATCCCTTTCCAAGGTGGCAGAATTTGCATCTTCAAGCTTTAGTGTCTGGACCTaGAAAAAGAACCATTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SPDIRSSLSKVAEFASSSFSVWT*KKNHSK Trigger: TTTGGAATGGTTCTTTTTGCAGGTCCAGACACTAAA...GCTTGAAGATGCAAATTCTGCCACCTTGGAAAGGGATGAACGGATATCTGGGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147517.8 |
||
| CDS-3UTR CCA 90 bp | TTTGTCCCCACATGGAACAGTCTGAACACTCTCTCTATAAACCTAACCATGTTAGTAACTGCAAAGGACTaGAGGTCAGCAATGTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: FVPTWNSLNTLSINLTMLVTAKD*RSAMCC Trigger: GCAACACATTGCTGACCTCCAGTCCTTTGCAGTTAC...TAACATGGTTAGGTTTATAGAGAGAGTGTTCAGACTGTTCCATGTGGGGACAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
||
| CDS-3UTR CCA 90 bp | TCTGAGCATGTAAGGCTTTGTTATCCTGGCAAGGGGAGCTCAAGTCTAGAGAAACGCTCACCGCGTCTGTaGTTTTCTTACATAAATTTT | + |
|
Preference number: 4 (lower is better) Translates to: SEHVRLCYPGKGSSSLEKRSPRL*FSYINF Trigger: AAAATTTATGTAAGAAAACCACAGACGCGGTGAGCG...TTTCTCTAGACTTGAGCTCCCCTTGCCAGGATAACAAAGCCTTACATGCTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
||
| 3UTR CAA 72 bp | TCTGACCACCTACGCTATCCCCTACAAGCTGAGTGTTaGAAAGTTATCTTATCACAAACTGCATGTGCCTAT | + |
|
Preference number: 4 (lower is better) Translates to: SDHLRYPLQAEC*KVILSQTACAY Trigger: ATAGGCACATGCAGTTTGTGATAAGATAACTTTCAAACACTCAGCTTGTAGGGGATAGCGTAGGTGGTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147517.8 |
||
| CDS-3UTR GCA 90 bp | AGCAATTTGAATACAGAACCTAGTGAGTTGTCTACAGATCCCCAAATTGGGCTGTCTGATGTTAAGGACTaGAGGTCTTCATTGGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SNLNTEPSELSTDPQIGLSDVKD*RSSLEG Trigger: TCCTTCCAATGAAGACCTGCAGTCCTTAACATCAGA...CAGCCCAATTTGGGGATCTGTAGACAACTCACTAGGTTCTGTATTCAAATTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
||
| CDS-3UTR CCA 90 bp | TTTGTCCCCACATGGAACAGTCTGAACACTCTCTCTATAAACCTAACCATGTTATCTGACATTACAGTATaGCAGAGTGCGAGTAAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: FVPTWNSLNTLSINLTMLSDITV*QSASKR Trigger: TCGCTTACTCGCACTCTGCCATACTGTAATGTCAGA...TAACATGGTTAGGTTTATAGAGAGAGTGTTCAGACTGTTCCATGTGGGGACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
||
| CDS-3UTR CCA 90 bp | AGCAATTTGAATACAGAACCTAGTGAGTTGTCTACAGATCCCCAAATTGGGCTGCACCATCACTGTGCATaGCCAGTAAAATGGAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SNLNTEPSELSTDPQIGLHHHCA*PVKWRN Trigger: ATTTCTCCATTTTACTGGCCATGCACAGTGATGGTG...CAGCCCAATTTGGGGATCTGTAGACAACTCACTAGGTTCTGTATTCAAATTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
||
| 3UTR CAA 72 bp | CACATAAGATTAACAAGCTCTTTGTGCAAAGTAGTTTaGGTTGATCAGCAATTGCCTGGGAACCCAGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HIRLTSSLCKVV*VDQQLPGNPEK Trigger: CTTCTCTGGGTTCCCAGGCAATTGCTGATCAACCAAAACTACTTTGCACAAAGAGCTTGTTAATCTTATGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
||
| CDS-3UTR TCA 90 bp | TTTGTCCCCACATGGAACAGTCTGAACACTCTCTCTATAAACCTAACCATGTTAAAGAGATTTCTGGAATaGGCTGTAGTATCAGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FVPTWNSLNTLSINLTMLKRFLE*AVVSEG Trigger: TCCTTCTGATACTACAGCTCATTCCAGAAATCTCTT...TAACATGGTTAGGTTTATAGAGAGAGTGTTCAGACTGTTCCATGTGGGGACAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
||
| 3UTR CAA 72 bp | CACGTACGTGGTGTATCTGTTGACATGCGTTTTTGGTaGAAACACATCATTGGAACATACCTTTTACATACC | + |
|
Preference number: 4 (lower is better) Translates to: HVRGVSVDMRFW*KHIIGTYLLHT Trigger: GGTATGTAAAAGGTATGTTCCAATGATGTGTTTCAACCAAAAACGCATGTCAACAGATACACCACGTACGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
||
| 3UTR CAA 72 bp | GTAGATATGTATAGAGAAAGGAATCATGACAAGCATTaGCTATGGGTAAAGGCTCTAGGTAGTAGGCTACTG | + |
|
Preference number: 4 (lower is better) Translates to: VDMYRERNHDKH*LWVKALGSRLL Trigger: CAGTAGCCTACTACCTAGAGCCTTTACCCATAGCAAATGCTTGTCATGATTCCTTTCTCTATACATATCTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
||
| 3UTR CAA 72 bp | CTGAGATGGTCTGATGTTAAGGACTGCAGGTCTTCATaGGAAGGATGGAGCTTTTCAAACAAAATAGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: LRWSDVKDCRSS*EGWSFSNKIVS Trigger: AGATACTATTTTGTTTGAAAAGCTCCATCCTTCCAATGAAGACCTGCAGTCCTTAACATCAGACCATCTCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147517.8 |
||
| CDS-3UTR CCA 90 bp | TTTGTCCCCACATGGAACAGTCTGAACACTCTCTCTATAAACCTAACCATGTTAGTTATTTCTTTCTTCTaGATTGGGTCATCTAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: FVPTWNSLNTLSINLTMLVISFF*IGSSST Trigger: AGTGCTAGATGACCCAATCCAGAAGAAAGAAATAAC...TAACATGGTTAGGTTTATAGAGAGAGTGTTCAGACTGTTCCATGTGGGGACAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
||
| 3UTR CAA 72 bp | ATCATCCATCAAGACCACATAAGATTAACAAGCTCTTaGTGCAAAGTAGTTTTGGTTGATCAGCAATTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: IIHQDHIRLTSS*CKVVLVDQQLP Trigger: AGGCAATTGCTGATCAACCAAAACTACTTTGCACAAAGAGCTTGTTAATCTTATGTGGTCTTGATGGATGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
||
| 3UTR CAA 72 bp | TTGTTTGTTTGTTTGGTTGGTTGGTTGGTTGGTTGGTaGGTTTTGTTTGGTTTTGTTTATTTCCTTGTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LFVCLVGWLVGW*VLFGFVYFLVD Trigger: ATCTACAAGGAAATAAACAAAACCAAACAAAACCAACCAACCAACCAACCAACCAACCAAACAAACAAACAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
||
| CDS-3UTR GCA 90 bp | CATCATCCATCAAGACCACATAAGATTAACAAGCTCTTTGTGCAAAGTAGTTTTCATTGGAAAAACTCGTaGTTTGTCCAAGCAAATTTT | + |
|
Preference number: 4 (lower is better) Translates to: HHPSRPHKINKLFVQSSFHWKNS*FVQANF Trigger: AAAATTTGCTTGGACAAAGCACGAGTTTTTCCAATG...AAAACTACTTTGCACAAAGAGCTTGTTAATCTTATGTGGTCTTGATGGATGATG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
||
| CDS-3UTR CAA 90 bp | TGGCAGAGTGCGAGTAAGCGAAGGAATTCATGGACTTTGGGGTCCCCCAGCTCATTGCTGAGGGCATGCTaGCTGTCCTTCCAAGAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: WQSASKRRNSWTLGSPSSLLRAC*LSFQER Trigger: CCTCTCTTGGAAGGACAGCAAGCATGCCCTCAGCAA...TGAGCTGGGGGACCCCAAAGTCCATGAATTCCTTCGCTTACTCGCACTCTGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147517.8 |
||
| CDS-3UTR CAA 90 bp | ATGAGGCCTTGGTCTACAGAATCACAGATTGGACAGTGCCCATCTGGCCTGGAAGAGGTCAGCAATGTGTaGCCCGTCCTCTGCAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: MRPWSTESQIGQCPSGLEEVSNV*PVLCSH Trigger: GTGGCTGCAGAGGACGGGCAACACATTGCTGACCTC...TTCCAGGCCAGATGGGCACTGTCCAATCTGTGATTCTGTAGACCAAGGCCTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS GCA 90 bp | CTCAGGACGCAGCCTCTCAGGATTATCTTCTGGTTGCTGAGGGCATaGTTGCTGTCCTTCCAAGAGAGGACCCCCGAGAATCTGTCTAAC | + |
|
Preference number: 5 (lower is better) Translates to: LRTQPLRIIFWLLRA*LLSFQERTPENLSN Trigger: GTTAGACAGATTCTCGGGGGTCCTCTCTTGGAAGGACAGCAAGCATGCCCTCAGCAACCAGAAGATAATCCTGAGAGGCTGCGTCCTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 ENSMUST00000129187.2 ENSMUST00000147517.8 |
||
| CDS-3UTR CAA 90 bp | CACAGATTGGACAGTGCCCATCTGGCCTGGAATCCTGCAGAAAACATCGCTATCTTGCTGAGGGCATGCTaGCTGTCCTTCCAAGAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: HRLDSAHLAWNPAENIAILLRAC*LSFQER Trigger: CCTCTCTTGGAAGGACAGCAAGCATGCCCTCAGCAA...GATAGCGATGTTTTCTGCAGGATTCCAGGCCAGATGGGCACTGTCCAATCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR CAA 90 bp | GATTGGACAGTGCCCATCTGGCCTGGAATCCTGCAGAAAACATCGCTATCTGACTTGCTGAGGGCATGCTaGCTGTCCTTCCAAGAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: DWTVPIWPGILQKTSLSDLLRAC*LSFQER Trigger: CCTCTCTTGGAAGGACAGCAAGCATGCCCTCAGCAA...GTCAGATAGCGATGTTTTCTGCAGGATTCCAGGCCAGATGGGCACTGTCCAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR CAA 90 bp | TTAAATGGGATCTGTCAGCAGCATTTGCCCATGGCCTGCATGGAACACTGTCAAGAGGTCAGCAATGTGTaGCCCGTCCTCTGCAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LNGICQQHLPMACMEHCQEVSNV*PVLCSH Trigger: GTGGCTGCAGAGGACGGGCAACACATTGCTGACCTC...TTGACAGTGTTCCATGCAGGCCATGGGCAAATGCTGCTGACAGATCCCATTTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
||
| CDS-3UTR CAA 90 bp | CTGTACTTGTCCCATGAGGCCTTGGTCTACAGAATCACAGATTGGACAGTGCCCGACGAACCTTCAGGTTaGTTTCCCCGTCAAGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LYLSHEALVYRITDWTVPDEPSG*FPRQAQ Trigger: CTGAGCTTGACGGGGAAACAAACCTGAAGGTTCGTC...GGGCACTGTCCAATCTGTGATTCTGTAGACCAAGGCCTCATGGGACAAGTACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR CAA 90 bp | ACCTGGGAAATGTTGGAGGCCCGAAGGCAATGCCTCGTTGCCAATATCAACCCTAGGATTATCTTCTGGTaGCTGAGGGCATGCTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TWEMLEARRQCLVANINPRIIFW*LRACLL Trigger: CAGCAAGCATGCCCTCAGCAACCAGAAGATAATCCT...AGGGTTGATATTGGCAACGAGGCATTGCCTTCGGGCCTCCAACATTTCCCAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147517.8 |
||
| CDS-3UTR CAA 90 bp | CTGTACTTGTCCCATGAGGCCTTGGTCTACAGAATCACAGATTGGACAGTGCCCAGGAATTCATGGACTTaGGGGTCCCCCAGCTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: LYLSHEALVYRITDWTVPRNSWT*GSPSSM Trigger: CATTGAGCTGGGGGACCCCAAAGTCCATGAATTCCT...GGGCACTGTCCAATCTGTGATTCTGTAGACCAAGGCCTCATGGGACAAGTACAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR CAA 90 bp | GAATCACAGATTGGACAGTGCCCATCTGGCCTGGAATCCTGCAGAAAACATCGCAGGAATTCATGGACTTaGGGGTCCCCCAGCTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: ESQIGQCPSGLESCRKHRRNSWT*GSPSSM Trigger: CATTGAGCTGGGGGACCCCAAAGTCCATGAATTCCT...GCGATGTTTTCTGCAGGATTCCAGGCCAGATGGGCACTGTCCAATCTGTGATTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS GCA 90 bp | CGTCAAGCTCAGCTGTTTCAACATAACAGAGACCGTGTGGCTCACTaGTCGACAGGAGCAGCAGGTCAGCAGCGACAAATTGGTTGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: RQAQLFQHNRDRVAH*STGAAGQQRQIGCF Trigger: AAAACAACCAATTTGTCGCTGCTGACCTGCTGCTCCTGTCGAGCAGTGAGCCACACGGTCTCTGTTATGTTGAAACAGCTGAGCTTGACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 ENSMUST00000129187.2 ENSMUST00000147517.8 |
||
| CDS-3UTR CAA 90 bp | TACTTGTCCCATGAGGCCTTGGTCTACAGAATCACAGATTGGACAGTGCCCATCGACGAACCTTCAGGTTaGTTTCCCCGTCAAGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: YLSHEALVYRITDWTVPIDEPSG*FPRQAQ Trigger: CTGAGCTTGACGGGGAAACAAACCTGAAGGTTCGTC...GATGGGCACTGTCCAATCTGTGATTCTGTAGACCAAGGCCTCATGGGACAAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR CAA 90 bp | GATTGGACAGTGCCCATCTGGCCTGGAATCCTGCAGAAAACATCGCTATCTGACAGGATTATCTTCTGGTaGCTGAGGGCATGCTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: DWTVPIWPGILQKTSLSDRIIFW*LRACLL Trigger: CAGCAAGCATGCCCTCAGCAACCAGAAGATAATCCT...GTCAGATAGCGATGTTTTCTGCAGGATTCCAGGCCAGATGGGCACTGTCCAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS TCA 90 bp | AGACTGCTAATGTCTGCTCCAAGTTCTGAGGTGACAGGTAGTGCCTaGCGAACCTTCAGGTTTGTTTCCCCGTCAAGCTCAGCTGTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RLLMSAPSSEVTGSA*RTFRFVSPSSSAVS Trigger: TGAAACAGCTGAGCTTGACGGGGAAACAAACCTGAAGGTTCGTCAGGCACTACCTGTCACCTCAGAACTTGGAGCAGACATTAGCAGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 ENSMUST00000129187.2 ENSMUST00000147517.8 |
||
| CDS-3UTR CAA 90 bp | AGCCCAGATATCCGTTCATCCCTTTCCAAGGTGGCAGAATTTGCATCTTCAAGCGACGAACCTTCAGGTTaGTTTCCCCGTCAAGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: SPDIRSSLSKVAEFASSSDEPSG*FPRQAQ Trigger: CTGAGCTTGACGGGGAAACAAACCTGAAGGTTCGTC...GCTTGAAGATGCAAATTCTGCCACCTTGGAAAGGGATGAACGGATATCTGGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147517.8 |
||
| CDS-3UTR CAA 90 bp | CTGCCCCTTCCCAGACTCCCTTTCCTTCAACACGCACCTGAGTTCTTCTCGCACGTGAGAGTTCCTGTTTaGTCAGAGAAGATATATTCG | + |
|
Preference number: 5 (lower is better) Translates to: LPLPRLPFLQHAPEFFSHVRVPV*SEKIYS Trigger: CGAATATATCTTCTCTGACAAAACAGGAACTCTCAC...GTGCGAGAAGAACTCAGGTGCGTGTTGAAGGAAAGGGAGTCTGGGAAGGGGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147517.8 |
||
| CDS-3UTR CAA 90 bp | GTGCCCATCTGGCCTGGAATCCTGCAGAAAACATCGCTATCTGACAGGCGTTGGTTTCTTTCTTCTGGATaGGGTCATCTAGCACTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: VPIWPGILQKTSLSDRRWFLSSG*GHLALH Trigger: GTGAAGTGCTAGATGACCCAATCCAGAAGAAAGAAA...CCAACGCCTGTCAGATAGCGATGTTTTCTGCAGGATTCCAGGCCAGATGGGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR CAA 90 bp | AAACAGGAATGGGAGAACTGTCTCACGGCCCTGCCCCTTCCCAGACTCCCTTTCAAAAGTCATGATGTTTaGGGTGAGAGTTCCTGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: KQEWENCLTALPLPRLPFKSHDV*GESSCF Trigger: AAAACAGGAACTCTCACCCAAAACATCATGACTTTT...GAAAGGGAGTCTGGGAAGGGGCAGGGCCGTGAGACAGTTCTCCCATTCCTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147517.8 |
||
| CDS-3UTR CAA 90 bp | ATGAGGCCTTGGTCTACAGAATCACAGATTGGACAGTGCCCATCTGGCCTGGAATCCTTCATCAGGCGATaGAACTTGGTAAACCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: MRPWSTESQIGQCPSGLESFIRR*NLVNQL Trigger: CAACTGGTTTACCAAGTTCAATCGCCTGATGAAGGA...TTCCAGGCCAGATGGGCACTGTCCAATCTGTGATTCTGTAGACCAAGGCCTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR CAA 90 bp | GTGCCCATCTGGCCTGGAATCCTGCAGAAAACATCGCTATCTGACAGGCGTTGGATCCTTTTCCGGATGTaGTTGAAATCCAAAAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: VPIWPGILQKTSLSDRRWILFRM*LKSKKA Trigger: TGCCTTTTTGGATTTCAACAACATCCGGAAAAGGAT...CCAACGCCTGTCAGATAGCGATGTTTTCTGCAGGATTCCAGGCCAGATGGGCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR CAA 90 bp | GATTGGACAGTGCCCATCTGGCCTGGAATCCTGCAGAAAACATCGCTATCTGACCCAAGGTGGCAGAATTaGCATCTTCAAGCATCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: DWTVPIWPGILQKTSLSDPRWQN*HLQASS Trigger: AGAAGATGCTTGAAGATGCAAATTCTGCCACCTTGG...GTCAGATAGCGATGTTTTCTGCAGGATTCCAGGCCAGATGGGCACTGTCCAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR CAA 90 bp | GTGCCCATCTGGCCTGGAATCCTGCAGAAAACATCGCTATCTGACAGGCGTTGGAAAAATGTGAGAACGTaGTACTTGGACGTATGGATA | + |
|
Preference number: 5 (lower is better) Translates to: VPIWPGILQKTSLSDRRWKNVRT*YLDVWI Trigger: TATCCATACGTCCAAGTACAACGTTCTCACATTTTT...CCAACGCCTGTCAGATAGCGATGTTTTCTGCAGGATTCCAGGCCAGATGGGCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR CAA 90 bp | CTGTACTTGTCCCATGAGGCCTTGGTCTACAGAATCACAGATTGGACAGTGCCCCTTCACTCTCCAAGATaGAACTTCCTACTGCAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: LYLSHEALVYRITDWTVPLHSPR*NFLLQE Trigger: TTCTTGCAGTAGGAAGTTCAATCTTGGAGAGTGAAG...GGGCACTGTCCAATCTGTGATTCTGTAGACCAAGGCCTCATGGGACAAGTACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR CAA 90 bp | GCCTTGGTCTACAGAATCACAGATTGGACAGTGCCCATCTGGCCTGGAATCCTGGTGAGAGTTCCTGTTTaGTCAGAGAAGATATATTCG | + |
|
Preference number: 5 (lower is better) Translates to: ALVYRITDWTVPIWPGILVRVPV*SEKIYS Trigger: CGAATATATCTTCTCTGACAAAACAGGAACTCTCAC...CAGGATTCCAGGCCAGATGGGCACTGTCCAATCTGTGATTCTGTAGACCAAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR CAA 90 bp | GGATCTGTCAGCAGCATTTGCCCATGGCCTGCATGGAACACTGTCAATAAAGGGTTTCTTTCTTCTGGATaGGGTCATCTAGCACTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: GSVSSICPWPAWNTVNKGFLSSG*GHLALH Trigger: GTGAAGTGCTAGATGACCCAATCCAGAAGAAAGAAA...CCCTTTATTGACAGTGTTCCATGCAGGCCATGGGCAAATGCTGCTGACAGATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
||
| CDS-3UTR CAA 90 bp | GCCTTGGTCTACAGAATCACAGATTGGACAGTGCCCATCTGGCCTGGAATCCTGATCCTTTTCCGGATGTaGTTGAAATCCAAAAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: ALVYRITDWTVPIWPGILILFRM*LKSKKA Trigger: TGCCTTTTTGGATTTCAACAACATCCGGAAAAGGAT...CAGGATTCCAGGCCAGATGGGCACTGTCCAATCTGTGATTCTGTAGACCAAGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR CAA 90 bp | TCACAGATTGGACAGTGCCCATCTGGCCTGGAATCCTGCAGAAAACATCGCTATCCAAGGTGGCAGAATTaGCATCTTCAAGCATCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SQIGQCPSGLESCRKHRYPRWQN*HLQASS Trigger: AGAAGATGCTTGAAGATGCAAATTCTGCCACCTTGG...ATAGCGATGTTTTCTGCAGGATTCCAGGCCAGATGGGCACTGTCCAATCTGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR CAA 90 bp | TGTCCCATGAGGCCTTGGTCTACAGAATCACAGATTGGACAGTGCCCATCTGGCGGAAAAACTCGTGCTTaGTCCAAGCAAATTTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: CPMRPWSTESQIGQCPSGGKTRA*SKQIFL Trigger: AAGGAAAATTTGCTTGGACAAAGCACGAGTTTTTCC...GCCAGATGGGCACTGTCCAATCTGTGATTCTGTAGACCAAGGCCTCATGGGACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR CAA 90 bp | CTTGGTCTACAGAATCACAGATTGGACAGTGCCCATCTGGCCTGGAATCCTGCAAACAAGAAGCAGTCGTaGGAGATATCTAAACTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LGLQNHRLDSAHLAWNPANKKQS*EISKLS Trigger: GCTCAGTTTAGATATCTCCAACGACTGCTTCTTGTT...TGCAGGATTCCAGGCCAGATGGGCACTGTCCAATCTGTGATTCTGTAGACCAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR CAA 90 bp | TGTCCCATGAGGCCTTGGTCTACAGAATCACAGATTGGACAGTGCCCATCTGGCTCTGATCACTCAGGCTaGGGTATAAATACATCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: CPMRPWSTESQIGQCPSGSDHSG*GINTSS Trigger: TGAAGATGTATTTATACCCAAGCCTGAGTGATCAGA...GCCAGATGGGCACTGTCCAATCTGTGATTCTGTAGACCAAGGCCTCATGGGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR CAA 90 bp | TGCAAAGTAGTTTTGGTTGATCAGCAATTGCCTGGGAACCCAGAGAAGGAAGGCTCCTTCATCAGGCGATaGAACTTGGTAAACCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: CKVVLVDQQLPGNPEKEGSFIRR*NLVNQL Trigger: CAACTGGTTTACCAAGTTCAATCGCCTGATGAAGGA...GCCTTCCTTCTCTGGGTTCCCAGGCAATTGCTGATCAACCAAAACTACTTTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
||
| CDS-3UTR CAA 90 bp | GCCTTGGTCTACAGAATCACAGATTGGACAGTGCCCATCTGGCCTGGAATCCTGATCCAGATCTTAATATaGGCTAGTGAGAGACTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: ALVYRITDWTVPIWPGILIQILI*ASERLV Trigger: TACAAGTCTCTCACTAGCCAATATTAAGATCTGGAT...CAGGATTCCAGGCCAGATGGGCACTGTCCAATCTGTGATTCTGTAGACCAAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR CAA 90 bp | CACAGATTGGACAGTGCCCATCTGGCCTGGAATCCTGCAGAAAACATCGCTATCGGAAAAACTCGTGCTTaGTCCAAGCAAATTTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: HRLDSAHLAWNPAENIAIGKTRA*SKQIFL Trigger: AAGGAAAATTTGCTTGGACAAAGCACGAGTTTTTCC...GATAGCGATGTTTTCTGCAGGATTCCAGGCCAGATGGGCACTGTCCAATCTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR CAA 90 bp | CTGTACTTGTCCCATGAGGCCTTGGTCTACAGAATCACAGATTGGACAGTGCCCTCTGATCACTCAGGCTaGGGTATAAATACATCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LYLSHEALVYRITDWTVPSDHSG*GINTSS Trigger: TGAAGATGTATTTATACCCAAGCCTGAGTGATCAGA...GGGCACTGTCCAATCTGTGATTCTGTAGACCAAGGCCTCATGGGACAAGTACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR CAA 90 bp | TCACAGATTGGACAGTGCCCATCTGGCCTGGAATCCTGCAGAAAACATCGCTATAAAGAAAGTAGGCATTaGCCACTCTTTGTAACTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SQIGQCPSGLESCRKHRYKESRH*PLFVTA Trigger: AGCAGTTACAAAGAGTGGCAAATGCCTACTTTCTTT...ATAGCGATGTTTTCTGCAGGATTCCAGGCCAGATGGGCACTGTCCAATCTGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR CAA 90 bp | TTGCTTTCTATCATACTTAGCAACCTCATTTCTTTGACAGTCCCACTGGCGACTAGGATTATCTTCTGGTaGCTGAGGGCATGCTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LLSIILSNLISLTVPLATRIIFW*LRACLL Trigger: CAGCAAGCATGCCCTCAGCAACCAGAAGATAATCCT...AGTCGCCAGTGGGACTGTCAAAGAAATGAGGTTGCTAAGTATGATAGAAAGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
||
| CDS-3UTR CAA 90 bp | ATCTGTACTTGTCCCATGAGGCCTTGGTCTACAGAATCACAGATTGGACAGTGCCTTCACTCTCCAAGATaGAACTTCCTACTGCAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: ICTCPMRPWSTESQIGQCLHSPR*NFLLQE Trigger: TTCTTGCAGTAGGAAGTTCAATCTTGGAGAGTGAAG...GCACTGTCCAATCTGTGATTCTGTAGACCAAGGCCTCATGGGACAAGTACAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR CAA 90 bp | CTCGATTTCTTCATACAGCCCAGATATCCGTTCATCCCTTTCCAAGGTGGCAGACTTCACTCTCCAAGATaGAACTTCCTACTGCAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: LDFFIQPRYPFIPFQGGRLHSPR*NFLLQE Trigger: TTCTTGCAGTAGGAAGTTCAATCTTGGAGAGTGAAG...TCTGCCACCTTGGAAAGGGATGAACGGATATCTGGGCTGTATGAAGAAATCGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147517.8 |
||
| CDS-3UTR CAA 90 bp | CTGTACTTGTCCCATGAGGCCTTGGTCTACAGAATCACAGATTGGACAGTGCCCAAAAGTCATGATGTTTaGGGTGAGAGTTCCTGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LYLSHEALVYRITDWTVPKSHDV*GESSCF Trigger: AAAACAGGAACTCTCACCCAAAACATCATGACTTTT...GGGCACTGTCCAATCTGTGATTCTGTAGACCAAGGCCTCATGGGACAAGTACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS CCA 90 bp | TGTGGCTCACTGCTCGACAGGAGCAGCAGGTCAGCAGCGACAAATTaGTTGTTTTCTAATTTAATGATGTCTCCAACTTTAACATTCATC | + |
|
Preference number: 5 (lower is better) Translates to: CGSLLDRSSRSAATN*LFSNLMMSPTLTFI Trigger: GATGAATGTTAAAGTTGGAGACATCATTAAATTAGAAAACAACCAATTTGTCGCTGCTGACCTGCTGCTCCTGTCGAGCAGTGAGCCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 ENSMUST00000129187.2 ENSMUST00000147517.8 |
||
| CDS-3UTR CAA 90 bp | ATCTGTACTTGTCCCATGAGGCCTTGGTCTACAGAATCACAGATTGGACAGTGCAAAAATGTGAGAACGTaGTACTTGGACGTATGGATA | + |
|
Preference number: 5 (lower is better) Translates to: ICTCPMRPWSTESQIGQCKNVRT*YLDVWI Trigger: TATCCATACGTCCAAGTACAACGTTCTCACATTTTT...GCACTGTCCAATCTGTGATTCTGTAGACCAAGGCCTCATGGGACAAGTACAGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS-3UTR CAA 90 bp | TGCAAAGTAGTTTTGGTTGATCAGCAATTGCCTGGGAACCCAGAGAAGGAAGGCAAAAGTCATGATGTTTaGGGTGAGAGTTCCTGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: CKVVLVDQQLPGNPEKEGKSHDV*GESSCF Trigger: AAAACAGGAACTCTCACCCAAAACATCATGACTTTT...GCCTTCCTTCTCTGGGTTCCCAGGCAATTGCTGATCAACCAAAACTACTTTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
||
| CDS-3UTR CAA 90 bp | CATCAAATCCCTCTCGATTTCTTCATACAGCCCAGATATCCGTTCATCCCTTTCAAAAATGTGAGAACGTaGTACTTGGACGTATGGATA | + |
|
Preference number: 5 (lower is better) Translates to: HQIPLDFFIQPRYPFIPFKNVRT*YLDVWI Trigger: TATCCATACGTCCAAGTACAACGTTCTCACATTTTT...GAAAGGGATGAACGGATATCTGGGCTGTATGAAGAAATCGAGAGGGATTTGATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147517.8 |
||
| CDS-3UTR CAA 90 bp | TTTGTCCCCACATGGAACAGTCTGAACACTCTCTCTATAAACCTAACCATGTTAAACAAGAAGCAGTCGTaGGAGATATCTAAACTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: FVPTWNSLNTLSINLTMLNKKQS*EISKLS Trigger: GCTCAGTTTAGATATCTCCAACGACTGCTTCTTGTT...TAACATGGTTAGGTTTATAGAGAGAGTGTTCAGACTGTTCCATGTGGGGACAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
||
| CDS-3UTR CAA 90 bp | TTTGTCCCCACATGGAACAGTCTGAACACTCTCTCTATAAACCTAACCATGTTAAAAGAAAGTAGGCATTaGCCACTCTTTGTAACTGCT | + |
|
Preference number: 5 (lower is better) Translates to: FVPTWNSLNTLSINLTMLKESRH*PLFVTA Trigger: AGCAGTTACAAAGAGTGGCAAATGCCTACTTTCTTT...TAACATGGTTAGGTTTATAGAGAGAGTGTTCAGACTGTTCCATGTGGGGACAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
||
| CDS-3UTR CAA 90 bp | TTGCTTTCTATCATACTTAGCAACCTCATTTCTTTGACAGTCCCACTGGCGACTATCCAGATCTTAATATaGGCTAGTGAGAGACTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: LLSIILSNLISLTVPLATIQILI*ASERLV Trigger: TACAAGTCTCTCACTAGCCAATATTAAGATCTGGAT...AGTCGCCAGTGGGACTGTCAAAGAAATGAGGTTGCTAAGTATGATAGAAAGCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
||
| CDS-3UTR CAA 90 bp | CATCATCCATCAAGACCACATAAGATTAACAAGCTCTTTGTGCAAAGTAGTTTTGTGAGAGTTCCTGTTTaGTCAGAGAAGATATATTCG | + |
|
Preference number: 5 (lower is better) Translates to: HHPSRPHKINKLFVQSSFVRVPV*SEKIYS Trigger: CGAATATATCTTCTCTGACAAAACAGGAACTCTCAC...AAAACTACTTTGCACAAAGAGCTTGTTAATCTTATGTGGTCTTGATGGATGATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040128.12 |
||
| CDS CAA 90 bp | CAGCTGGTGTTCCTCAGGACGCAGCCTCTCAGGATTATCTTCTGGTaGCTGAGGGCATGCTTGCTGTCCTTCCAAGAGAGGACCCCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: QLVFLRTQPLRIIFW*LRACLLSFQERTPE Trigger: CTCGGGGGTCCTCTCTTGGAAGGACAGCAAGCATGCCCTCAGCAACCAGAAGATAATCCTGAGAGGCTGCGTCCTGAGGAACACCAGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 ENSMUST00000129187.2 ENSMUST00000147517.8 |
||
| CDS TCA 72 bp | GCGTATCCAGATCTTCTAGAGCTCGACCTGCGGGTCTaGGGCCTTCTGCTTCGCAGGGGTCTTTTCTTTCGC | + |
|
Preference number: 6 (lower is better) Translates to: AYPDLLELDLRV*GLLLRRGLFFR Trigger: GCGAAAGAAAAGACCCCTGCGAAGCAGAAGGCCTCAGACCCGCAGGTCGAGCTCTAGAAGATCTGGATACGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS TCA 72 bp | CACTCTTGTGACGGAAATAGTCGTCGGTGGCATCCTTaGCAGCCGTCATCGAGATCACCAGGACCAGTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: HSCDGNSRRWHP*QPSSRSPGPVA Trigger: TGCCACTGGTCCTGGTGATCTCGATGACGGCTGTCAAGGATGCCACCGACGACTATTTCCGTCACAAGAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 ENSMUST00000129187.2 ENSMUST00000147517.8 |
||
| CDS CCA 72 bp | GTCAAGCTCAGCTGTTTCAACATAACAGAGACCGTGTaGCTCACTGCTCGACAGGAGCAGCAGGTCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: VKLSCFNITETV*LTARQEQQVSS Trigger: GCTGCTGACCTGCTGCTCCTGTCGAGCAGTGAGCCACACGGTCTCTGTTATGTTGAAACAGCTGAGCTTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 ENSMUST00000129187.2 ENSMUST00000147517.8 |
||
| CDS GCA 72 bp | AGAACCACAAGCCAGACAAACTTCTGGCTCAGGGAGTaGCGTGCATTTCCAACAAAGGGGAAATGGCGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: RTTSQTNFWLRE*RAFPTKGKWRG Trigger: CCCACGCCATTTCCCCTTTGTTGGAAATGCACGGCACTCCCTGAGCCAGAAGTTTGTCTGGCTTGTGGTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS CAA 72 bp | TTCCTCAGGACGCAGCCTCTCAGGATTATCTTCTGGTaGCTGAGGGCATGCTTGCTGTCCTTCCAAGAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: FLRTQPLRIIFW*LRACLLSFQER Trigger: CCTCTCTTGGAAGGACAGCAAGCATGCCCTCAGCAACCAGAAGATAATCCTGAGAGGCTGCGTCCTGAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 ENSMUST00000129187.2 ENSMUST00000147517.8 |
||
| CDS CAA 90 bp | AGGACGCAGCCTCTCAGGATTATCTTCTGGTTGCTGAGGGCATGCTaGCTGTCCTTCCAAGAGAGGACCCCCGAGAATCTGTCTAACTTG | + |
|
Preference number: 6 (lower is better) Translates to: RTQPLRIIFWLLRAC*LSFQERTPENLSNL Trigger: CAAGTTAGACAGATTCTCGGGGGTCCTCTCTTGGAAGGACAGCAAGCATGCCCTCAGCAACCAGAAGATAATCCTGAGAGGCTGCGTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 ENSMUST00000129187.2 ENSMUST00000147517.8 |
||
| CDS GCA 72 bp | CAGCTGTTTCAACATAACAGAGACCGTGTGGCTCACTaGTCGACAGGAGCAGCAGGTCAGCAGCGACAAATT | + |
|
Preference number: 6 (lower is better) Translates to: QLFQHNRDRVAH*STGAAGQQRQI Trigger: AATTTGTCGCTGCTGACCTGCTGCTCCTGTCGAGCAGTGAGCCACACGGTCTCTGTTATGTTGAAACAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 ENSMUST00000129187.2 ENSMUST00000147517.8 |
||
| CDS GCA 72 bp | AAAGGACTGGAGGTCAGCAATGTGTTGCCCGTCCTCTaGAGCCACATTGTAAAAGGCCCCGTAGGGAATGAA | + |
|
Preference number: 6 (lower is better) Translates to: KGLEVSNVLPVL*SHIVKGPVGNE Trigger: TTCATTCCCTACGGGGCCTTTTACAATGTGGCTGCAGAGGACGGGCAACACATTGCTGACCTCCAGTCCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS GCA 72 bp | CACAAGCCAGACAAACTTCTGGCTCAGGGAGTGCCGTaGATTTCCAACAAAGGGGAAATGGCGTGGGAAGAT | + |
|
Preference number: 6 (lower is better) Translates to: HKPDKLLAQGVP*ISNKGEMAWED Trigger: ATCTTCCCACGCCATTTCCCCTTTGTTGGAAATGCACGGCACTCCCTGAGCCAGAAGTTTGTCTGGCTTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS CAA 72 bp | TCCTTCCAAGAGAGGACCCCCGAGAATCTGTCTAACTaGTTGTTAGGCGCCTCACACCTGACGATCCCATCA | + |
|
Preference number: 6 (lower is better) Translates to: SFQERTPENLSN*LLGASHLTIPS Trigger: TGATGGGATCGTCAGGTGTGAGGCGCCTAACAACAAGTTAGACAGATTCTCGGGGGTCCTCTCTTGGAAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 ENSMUST00000129187.2 ENSMUST00000147517.8 |
||
| CDS CAA 90 bp | TGCTTGCTGTCCTTCCAAGAGAGGACCCCCGAGAATCTGTCTAACTaGTTGTTAGGCGCCTCACACCTGACGATCCCATCAAACTCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: CLLSFQERTPENLSN*LLGASHLTIPSNSA Trigger: TGCAGAGTTTGATGGGATCGTCAGGTGTGAGGCGCCTAACAACAAGTTAGACAGATTCTCGGGGGTCCTCTCTTGGAAGGACAGCAAGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 ENSMUST00000129187.2 ENSMUST00000147517.8 |
||
| CDS CCA 72 bp | CTGGACCTGCAAAAAGAACCATTCCAAAGCACCAGCTaGTGTTCCTCAGGACGCAGCCTCTCAGGATTATCT | + |
|
Preference number: 6 (lower is better) Translates to: LDLQKEPFQSTS*CSSGRSLSGLS Trigger: AGATAATCCTGAGAGGCTGCGTCCTGAGGAACACCAGCTGGTGCTTTGGAATGGTTCTTTTTGCAGGTCCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 ENSMUST00000129187.2 ENSMUST00000147517.8 |
||
| CDS CAA 72 bp | CCTCATTTAGAGTGGTCGTCCGGGCTTCAGCAGGCATaGCTTTCGAAGCATAATACATCTTCCGGTCCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: PHLEWSSGLQQA*LSKHNTSSGPS Trigger: ACTGGGACCGGAAGATGTATTATGCTTCGAAAGCAATGCCTGCTGAAGCCCGGACGACCACTCTAAATGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 ENSMUST00000129187.2 ENSMUST00000147517.8 |
||
| CDS CCA 72 bp | AGATATATTCGATCTGGCCCAGTTCCTCATTTAGAGTaGTCGTCCGGGCTTCAGCAGGCATTGCTTTCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: RYIRSGPVPHLE*SSGLQQALLSK Trigger: CTTCGAAAGCAATGCCTGCTGAAGCCCGGACGACCACTCTAAATGAGGAACTGGGCCAGATCGAATATATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 ENSMUST00000129187.2 ENSMUST00000147517.8 |
||
| CDS CCA 72 bp | GGCGTGGGAAGATTCCAAAGACACCATCACTGTGCATaGCCAGTAAAATGGAGAAATAGGTGGCAACACTGC | + |
|
Preference number: 6 (lower is better) Translates to: GVGRFQRHHHCA*PVKWRNRWQHC Trigger: GCAGTGTTGCCACCTATTTCTCCATTTTACTGGCCATGCACAGTGATGGTGTCTTTGGAATCTTCCCACGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS CAA 90 bp | TGCCACACAGATGAAAAATCTGCGCTTGTTAAAAAGGAGATTCAGTaGTCCAGGTTCGTAGAGCTGAGGATAGTCCATGCTGTTCTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: CHTDEKSALVKKEIQ*SRFVELRIVHAVLF Trigger: GAACAGAACAGCATGGACTATCCTCAGCTCTACGAACCTGGACAACTGAATCTCCTTTTTAACAAGCGCAGATTTTTCATCTGTGTGGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS GCA 72 bp | TCAGTTGTCCAGGTTCGTAGAGCTGAGGATAGTCCATaGTGTTCTGTTCATTTATGTCCTGGTCAAACATTC | + |
|
Preference number: 6 (lower is better) Translates to: SVVQVRRAEDSP*CSVHLCPGQTF Trigger: GAATGTTTGACCAGGACATAAATGAACAGAACAGCATGGACTATCCTCAGCTCTACGAACCTGGACAACTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS CAA 72 bp | GTAGTAGGACCACCTTCCATGAACAAGAAGCAGTCGTaGGAGATATCTAAACTGAGCCAATGCATAGTCACT | + |
|
Preference number: 6 (lower is better) Translates to: VVGPPSMNKKQS*EISKLSQCIVT Trigger: AGTGACTATGCATTGGCTCAGTTTAGATATCTCCAACGACTGCTTCTTGTTCATGGAAGGTGGTCCTACTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
||
| CDS TCA 72 bp | AGTTCTGAACTGGTCCCCAACTTCACTCTCCAAGATTaGACTTCCTACTGCAAGAATAATTCCCAAGCATAC | + |
|
Preference number: 6 (lower is better) Translates to: SSELVPNFTLQD*TSYCKNNSQAY Trigger: GTATGCTTGGGAATTATTCTTGCAGTAGGAAGTTCAATCTTGGAGAGTGAAGTTGGGGACCAGTTCAGAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 ENSMUST00000129187.2 ENSMUST00000147517.8 |
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| CDS CCA 72 bp | CCAACCGCTGCTTGTTGTCATAAACTGCATGTCCATTaGAAAAACTCGTGCTTTGTCCAAGCAAATTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: PTAACCHKLHVH*KNSCFVQANFP Trigger: AGGAAAATTTGCTTGGACAAAGCACGAGTTTTTCCAATGGACATGCAGTTTATGACAACAAGCAGCGGTTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
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| CDS CAA 72 bp | GATGAAAAATCTGCGCTTGTTAAAAAGGAGATTCAGTaGTCCAGGTTCGTAGAGCTGAGGATAGTCCATGCT | + |
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Preference number: 6 (lower is better) Translates to: DEKSALVKKEIQ*SRFVELRIVHA Trigger: AGCATGGACTATCCTCAGCTCTACGAACCTGGACAACTGAATCTCCTTTTTAACAAGCGCAGATTTTTCATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
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| CDS CAA 90 bp | CTGCTTGTTGTCATAAACTGCATGTCCATTGGAAAAACTCGTGCTTaGTCCAAGCAAATTTTCCTTTGCTTTCCTGAGTTCTTCTCGCAC | + |
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Preference number: 6 (lower is better) Translates to: LLVVINCMSIGKTRA*SKQIFLCFPEFFSH Trigger: GTGCGAGAAGAACTCAGGAAAGCAAAGGAAAATTTGCTTGGACAAAGCACGAGTTTTTCCAATGGACATGCAGTTTATGACAACAAGCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 |
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| CDS CCA 72 bp | ATTGGCAAAAATGTGAGAACGTTGTACTTGGACGTATaGATACGATTGTCCGCATACTGGAACTTCTCATTG | + |
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Preference number: 6 (lower is better) Translates to: IGKNVRTLYLDV*IRLSAYWNFSL Trigger: CAATGAGAAGTTCCAGTATGCGGACAATCGTATCCATACGTCCAAGTACAACGTTCTCACATTTTTGCCAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 ENSMUST00000129187.2 ENSMUST00000147517.8 |
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| CDS CAA 72 bp | AATAAATTAATTGGCAAAAATGTGAGAACGTTGTACTaGGACGTATGGATACGATTGTCCGCATACTGGAAC | + |
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Preference number: 6 (lower is better) Translates to: NKLIGKNVRTLY*DVWIRLSAYWN Trigger: GTTCCAGTATGCGGACAATCGTATCCATACGTCCAAGTACAACGTTCTCACATTTTTGCCAATTAATTTATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000040128.12 ENSMUST00000040149.13 ENSMUST00000129187.2 ENSMUST00000147517.8 |
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