Pregenerated sensors for ATP8B1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039529Ensembl transcript IDs: ENSMUST00000025482.10, ENSMUST00000235459.2, ENSMUST00000237686.2
Found 209 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGTGATGCCCAGCACCAAAAGCAGAGGTACAAGTGTGGTATACCATaGCAGGGTGGAGATTTGAGGAATTGCCTGCAGGATCAGGAGGAT | + |
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Preference number: 1 (lower is better) Translates to: RDAQHQKQRYKCGIP*QGGDLRNCLQDQED Trigger: ATCCTCCTGATCCTGCAGGCAATTCCTCAAATCTCCACCCTGGCATGGTATACCACACTTGTACCTCTGCTTTTGGTGCTGGGCATCACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237686.2 |
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| 3UTR CCA 90 bp | TGTTTCTCCCCTCCCACCCCGCAACCTCCCAGTCCATCCAGTGACTaGGAAGAGCTAAATAGTGTTGTCTTCCAAAGGAAACCACAAGGA | + |
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Preference number: 1 (lower is better) Translates to: CFSPPTPQPPSPSSD*EELNSVVFQRKPQG Trigger: TCCTTGTGGTTTCCTTTGGAAGACAACACTATTTAGCTCTTCCCAGTCACTGGATGGACTGGGAGGTTGCGGGGTGGGAGGGGAGAAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| 3UTR CCA 90 bp | CTGCTATGGGACCTAAGACTCCAGCTTTGCCACCAAGCCACAAGGTaGCCTGCCATGTTCCTCAGCACATGTATATTGTATAAAGTTGAC | + |
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Preference number: 1 (lower is better) Translates to: LLWDLRLQLCHQATR*PAMFLSTCILYKVD Trigger: GTCAACTTTATACAATATACATGTGCTGAGGAACATGGCAGGCCACCTTGTGGCTTGGTGGCAAAGCTGGAGTCTTAGGTCCCATAGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| 3UTR CCA 90 bp | GCAGCAGTTTGGATACACCTTTGTATGTATTATTCTCCTCTGTTGTaGGCAGTAGTAACAATGTTCCCATCACTTAAGAGTCAAGGCTCT | + |
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Preference number: 1 (lower is better) Translates to: AAVWIHLCMYYSPLL*AVVTMFPSLKSQGS Trigger: AGAGCCTTGACTCTTAAGTGATGGGAACATTGTTACTACTGCCCACAACAGAGGAGAATAATACATACAAAGGTGTATCCAAACTGCTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| 3UTR GCA 90 bp | GTAATTTTAACCATTTTTGTATTGGGCTATATTCATAGTTCTCCTTaGCTGGATGTGGCCACCGGCAGCAGTTTGGATACACCTTTGTAT | + |
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Preference number: 1 (lower is better) Translates to: VILTIFVLGYIHSSP*LDVATGSSLDTPLY Trigger: ATACAAAGGTGTATCCAAACTGCTGCCGGTGGCCACATCCAGGCAAGGAGAACTATGAATATAGCCCAATACAAAAATGGTTAAAATTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| 3UTR GCA 90 bp | ATAGAAGATGAACTACACATGATTTCCTCTTGGGAATTCACAGACTaGTATGAACATTTGCAAGGGGAAAGAAAGTTACCTACTACAACC | + |
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Preference number: 1 (lower is better) Translates to: IEDELHMISSWEFTD*YEHLQGERKLPTTT Trigger: GGTTGTAGTAGGTAACTTTCTTTCCCCTTGCAAATGTTCATAGCAGTCTGTGAATTCCCAAGAGGAAATCATGTGTAGTTCATCTTCTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| 3UTR TCA 90 bp | CTAGCATTTCTGAAACACACATTCCATTATCATGATCTATTATCATaGTCCCTTACGGTGCAAGAGATGCCACAATTTATTTCTCTTATC | + |
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Preference number: 1 (lower is better) Translates to: LAFLKHTFHYHDLLS*SLTVQEMPQFISLI Trigger: GATAAGAGAAATAAATTGTGGCATCTCTTGCACCGTAAGGGATCATGATAATAGATCATGATAATGGAATGTGTGTTTCAGAAATGCTAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| 3UTR-3UTR GCA 90 bp | TTCATAGTTCTCCTTGCCTGGATGTGGCCACCGGCAGCAGTTTGGATACACCTTAGCCACAAGGTGGCCTaGCATGTTCCTCAGCACATG | + |
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Preference number: 2 (lower is better) Translates to: FIVLLAWMWPPAAVWIHLSHKVA*HVPQHM Trigger: CATGTGCTGAGGAACATGGCAGGCCACCTTGTGGCT...AAGGTGTATCCAAACTGCTGCCGGTGGCCACATCCAGGCAAGGAGAACTATGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| 3UTR-3UTR GCA 90 bp | TTCATAGTTCTCCTTGCCTGGATGTGGCCACCGGCAGCAGTTTGGATACACCTTCTAAGACTCCAGCTTTaGCACCAAGCCACAAGGTGG | + |
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Preference number: 2 (lower is better) Translates to: FIVLLAWMWPPAAVWIHLLRLQL*HQATRW Trigger: CCACCTTGTGGCTTGGTGGCAAAGCTGGAGTCTTAG...AAGGTGTATCCAAACTGCTGCCGGTGGCCACATCCAGGCAAGGAGAACTATGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| 3UTR-3UTR CCA 90 bp | GCTCACACTCAAGACCAAGCAATGGAGTTGCACATGGGCATATACACACACAATCTCCTTGCCTGGATGTaGCCACCGGCAGCAGTTTGG | + |
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Preference number: 2 (lower is better) Translates to: AHTQDQAMELHMGIYTHNLLAWM*PPAAVW Trigger: CCAAACTGCTGCCGGTGGCCACATCCAGGCAAGGAG...ATTGTGTGTGTATATGCCCATGTGCAACTCCATTGCTTGGTCTTGAGTGTGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| 3UTR-3UTR GCA 90 bp | ACGAGCCACATCATCTACCAGGTCTTTGATGGCCGTGATGCCCAGCACCAAAAGAAGTGTGGTATACCATaGCAGGGTGGAGATTTGAGG | + |
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Preference number: 2 (lower is better) Translates to: TSHIIYQVFDGRDAQHQKKCGIP*QGGDLR Trigger: CCTCAAATCTCCACCCTGGCATGGTATACCACACTT...CTTTTGGTGCTGGGCATCACGGCCATCAAAGACCTGGTAGATGATGTGGCTCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237686.2 |
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| 3UTR-3UTR CCA 90 bp | GCTCACACTCAAGACCAAGCAATGGAGTTGCACATGGGCATATACACACACAATCACCAAGCCACAAGGTaGCCTGCCATGTTCCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: AHTQDQAMELHMGIYTHNHQATR*PAMFLS Trigger: GCTGAGGAACATGGCAGGCCACCTTGTGGCTTGGTG...ATTGTGTGTGTATATGCCCATGTGCAACTCCATTGCTTGGTCTTGAGTGTGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| 3UTR CAA 90 bp | ATGTTTCTTCCATTTTATACTGCTATGGGACCTAAGACTCCAGCTTaGCCACCAAGCCACAAGGTGGCCTGCCATGTTCCTCAGCACATG | + |
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Preference number: 2 (lower is better) Translates to: MFLPFYTAMGPKTPA*PPSHKVACHVPQHM Trigger: CATGTGCTGAGGAACATGGCAGGCCACCTTGTGGCTTGGTGGCAAAGCTGGAGTCTTAGGTCCCATAGCAGTATAAAATGGAAGAAACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| 3UTR-3UTR GCA 90 bp | GGCCGTGATGCCCAGCACCAAAAGCAGAGGTACAAGTGTGGTATACCATGCCAGGAAATAGAAGTTGGCTaGCCTCTTAAACTGCTCAAA | + |
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Preference number: 2 (lower is better) Translates to: GRDAQHQKQRYKCGIPCQEIEVG*PLKLLK Trigger: TTTGAGCAGTTTAAGAGGGCAGCCAACTTCTATTTC...CTGGCATGGTATACCACACTTGTACCTCTGCTTTTGGTGCTGGGCATCACGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237686.2 |
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| 3UTR-3UTR GCA 90 bp | TACCAGGTCTTTGATGGCCGTGATGCCCAGCACCAAAAGCAGAGGTACAAGTGTGCTGCCCTCTTAAACTaGTCAAACAAATTCATGGGT | + |
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Preference number: 2 (lower is better) Translates to: YQVFDGRDAQHQKQRYKCAALLN*SNKFMG Trigger: ACCCATGAATTTGTTTGAGCAGTTTAAGAGGGCAGC...ACACTTGTACCTCTGCTTTTGGTGCTGGGCATCACGGCCATCAAAGACCTGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237686.2 |
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| 3UTR CAA 90 bp | CAAAAGCAGAGGTACAAGTGTGGTATACCATGCCAGGGTGGAGATTaGAGGAATTGCCTGCAGGATCAGGAGGATGAGGAAATAGAAGTT | + |
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Preference number: 2 (lower is better) Translates to: QKQRYKCGIPCQGGD*RNCLQDQEDEEIEV Trigger: AACTTCTATTTCCTCATCCTCCTGATCCTGCAGGCAATTCCTCAAATCTCCACCCTGGCATGGTATACCACACTTGTACCTCTGCTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237686.2 |
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| 3UTR-3UTR TCA 90 bp | AGAAAGAAACAGGGAGCCCCAACAAGGTCTGAAAAAGTCATTAAACCACTTCCTGCAGACACAATCCGCTaGATAACAGGTGGTGTCTTG | + |
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Preference number: 2 (lower is better) Translates to: RKKQGAPTRSEKVIKPLPADTIR*ITGGVL Trigger: CAAGACACCACCTGTTATTCAGCGGATTGTGTCTGC...AGGAAGTGGTTTAATGACTTTTTCAGACCTTGTTGGGGCTCCCTGTTTCTTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| 3UTR CAA 90 bp | CCGGCAGCAGTTTGGATACACCTTTGTATGTATTATTCTCCTCTGTaGTGGGCAGTAGTAACAATGTTCCCATCACTTAAGAGTCAAGGC | + |
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Preference number: 2 (lower is better) Translates to: PAAVWIHLCMYYSPL*WAVVTMFPSLKSQG Trigger: GCCTTGACTCTTAAGTGATGGGAACATTGTTACTACTGCCCACAACAGAGGAGAATAATACATACAAAGGTGTATCCAAACTGCTGCCGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| 3UTR-3UTR TCA 90 bp | GTAACAATGTTCCCATCACTTAAGAGTCAAGGCTCTTGTTTCTCCCCTCCCACCTCTGTTTTCTTCTTTTaGAAGATGACAAGCAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: VTMFPSLKSQGSCFSPPTSVFFF*KMTSRG Trigger: CCCTCTGCTTGTCATCTTTCAAAAGAAGAAAACAGA...GGTGGGAGGGGAGAAACAAGAGCCTTGACTCTTAAGTGATGGGAACATTGTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| 3UTR-3UTR GCA 90 bp | TTCATAGTTCTCCTTGCCTGGATGTGGCCACCGGCAGCAGTTTGGATACACCTTTTACGGTGCAAGAGATaGCACAATTTATTTCTCTTA | + |
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Preference number: 2 (lower is better) Translates to: FIVLLAWMWPPAAVWIHLLRCKR*HNLFLL Trigger: TAAGAGAAATAAATTGTGGCATCTCTTGCACCGTAA...AAGGTGTATCCAAACTGCTGCCGGTGGCCACATCCAGGCAAGGAGAACTATGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| 3UTR-3UTR CCA 90 bp | AGAAAGAAACAGGGAGCCCCAACAAGGTCTGAAAAAGTCATTAAACCACTTCCTCCGCTGAATAACAGGTaGTGTCTTGGCTTTGCGATT | + |
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Preference number: 2 (lower is better) Translates to: RKKQGAPTRSEKVIKPLPPLNNR*CLGFAI Trigger: AATCGCAAAGCCAAGACACCACCTGTTATTCAGCGG...AGGAAGTGGTTTAATGACTTTTTCAGACCTTGTTGGGGCTCCCTGTTTCTTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| 3UTR CAA 90 bp | CTACACATGATTTCCTCTTGGGAATTCACAGACTGCTATGAACATTaGCAAGGGGAAAGAAAGTTACCTACTACAACCCACAGAGGCCTT | + |
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Preference number: 2 (lower is better) Translates to: LHMISSWEFTDCYEH*QGERKLPTTTHRGL Trigger: AAGGCCTCTGTGGGTTGTAGTAGGTAACTTTCTTTCCCCTTGCAAATGTTCATAGCAGTCTGTGAATTCCCAAGAGGAAATCATGTGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| 3UTR-3UTR TCA 90 bp | GTAACAATGTTCCCATCACTTAAGAGTCAAGGCTCTTGTTTCTCCCCTCCCACCGGTTATTGTCATCAGTaGCAACTTCAGTTTGTTTGT | + |
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Preference number: 2 (lower is better) Translates to: VTMFPSLKSQGSCFSPPTGYCHQ*QLQFVC Trigger: ACAAACAAACTGAAGTTGTCACTGATGACAATAACC...GGTGGGAGGGGAGAAACAAGAGCCTTGACTCTTAAGTGATGGGAACATTGTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| 3UTR-3UTR GCA 90 bp | AGAAAGAAACAGGGAGCCCCAACAAGGTCTGAAAAAGTCATTAAACCACTTCCTGACTTTTCTAAACTCTaGCGTCTTCCATTAGGCCAG | + |
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Preference number: 2 (lower is better) Translates to: RKKQGAPTRSEKVIKPLPDFSKL*RLPLGQ Trigger: CTGGCCTAATGGAAGACGGCAGAGTTTAGAAAAGTC...AGGAAGTGGTTTAATGACTTTTTCAGACCTTGTTGGGGCTCCCTGTTTCTTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| 3UTR-3UTR CCA 90 bp | ACACTCAAGACCAAGCAATGGAGTTGCACATGGGCATATACACACACAATTTCCAGTCCATCCAGTGACTaGGAAGAGCTAAATAGTGTT | + |
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Preference number: 2 (lower is better) Translates to: TLKTKQWSCTWAYTHTISSPSSD*EELNSV Trigger: AACACTATTTAGCTCTTCCCAGTCACTGGATGGACT...GGAAATTGTGTGTGTATATGCCCATGTGCAACTCCATTGCTTGGTCTTGAGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| 3UTR-3UTR CCA 90 bp | TCTGTTCTGAACAGTAGACCTCTCGTTTACTTCCAGGAAACACAGGGGAAAGTTTATTCTCCTCTGTTGTaGGCAGTAGTAACAATGTTC | + |
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Preference number: 2 (lower is better) Translates to: SVLNSRPLVYFQETQGKVYSPLL*AVVTMF Trigger: GAACATTGTTACTACTGCCCACAACAGAGGAGAATA...AACTTTCCCCTGTGTTTCCTGGAAGTAAACGAGAGGTCTACTGTTCAGAACAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| 3UTR CAA 90 bp | CACCTAAATCATTCAATCAAGGAAACTTGTTTCAAATTTCGAAAGTaGGTAGAAAGAAACAGGGAGCCCCAACAAGGTCTGAAAAAGTCA | + |
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Preference number: 2 (lower is better) Translates to: HLNHSIKETCFKFRK*VERNREPQQGLKKS Trigger: TGACTTTTTCAGACCTTGTTGGGGCTCCCTGTTTCTTTCTACCAACTTTCGAAATTTGAAACAAGTTTCCTTGATTGAATGATTTAGGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| 3UTR GCA 72 bp | CATTTTATACTGCTATGGGACCTAAGACTCCAGCTTTaGCACCAAGCCACAAGGTGGCCTGCCATGTTCCTC | + |
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Preference number: 3 (lower is better) Translates to: HFILLWDLRLQL*HQATRWPAMFL Trigger: GAGGAACATGGCAGGCCACCTTGTGGCTTGGTGGCAAAGCTGGAGTCTTAGGTCCCATAGCAGTATAAAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| 3UTR GCA 72 bp | CAGCACCAAAAGCAGAGGTACAAGTGTGGTATACCATaGCAGGGTGGAGATTTGAGGAATTGCCTGCAGGAT | + |
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Preference number: 3 (lower is better) Translates to: QHQKQRYKCGIP*QGGDLRNCLQD Trigger: ATCCTGCAGGCAATTCCTCAAATCTCCACCCTGGCATGGTATACCACACTTGTACCTCTGCTTTTGGTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237686.2 |
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| 3UTR CCA 72 bp | GACCTAAGACTCCAGCTTTGCCACCAAGCCACAAGGTaGCCTGCCATGTTCCTCAGCACATGTATATTGTAT | + |
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Preference number: 3 (lower is better) Translates to: DLRLQLCHQATR*PAMFLSTCILY Trigger: ATACAATATACATGTGCTGAGGAACATGGCAGGCCACCTTGTGGCTTGGTGGCAAAGCTGGAGTCTTAGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| 3UTR CCA 72 bp | AAAGCAGAGGTACAAGTGTGGTATACCATGCCAGGGTaGAGATTTGAGGAATTGCCTGCAGGATCAGGAGGA | + |
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Preference number: 3 (lower is better) Translates to: KAEVQVWYTMPG*RFEELPAGSGG Trigger: TCCTCCTGATCCTGCAGGCAATTCCTCAAATCTCCACCCTGGCATGGTATACCACACTTGTACCTCTGCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237686.2 |
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| 3UTR-3UTR CAA 90 bp | GCTCACACTCAAGACCAAGCAATGGAGTTGCACATGGGCATATACACACACAATCTGAGAAATCCACATTaGAGGCCACAGAGAGAAGAG | + |
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Preference number: 3 (lower is better) Translates to: AHTQDQAMELHMGIYTHNLRNPH*RPQREE Trigger: CTCTTCTCTCTGTGGCCTCAAATGTGGATTTCTCAG...ATTGTGTGTGTATATGCCCATGTGCAACTCCATTGCTTGGTCTTGAGTGTGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| 3UTR-3UTR CAA 90 bp | TCTGTTCTGAACAGTAGACCTCTCGTTTACTTCCAGGAAACACAGGGGAAAGTTGCCACCGGCAGCAGTTaGGATACACCTTTGTATGTA | + |
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Preference number: 3 (lower is better) Translates to: SVLNSRPLVYFQETQGKVATGSS*DTPLYV Trigger: TACATACAAAGGTGTATCCAAACTGCTGCCGGTGGC...AACTTTCCCCTGTGTTTCCTGGAAGTAAACGAGAGGTCTACTGTTCAGAACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| 3UTR-3UTR CAA 90 bp | TTCATAGTTCTCCTTGCCTGGATGTGGCCACCGGCAGCAGTTTGGATACACCTTAACCAGAGTGAAATGTaGCACCTAAATCATTCAATC | + |
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Preference number: 3 (lower is better) Translates to: FIVLLAWMWPPAAVWIHLNQSEM*HLNHSI Trigger: GATTGAATGATTTAGGTGCAACATTTCACTCTGGTT...AAGGTGTATCCAAACTGCTGCCGGTGGCCACATCCAGGCAAGGAGAACTATGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| 3UTR GCA 72 bp | ACCATTTTTGTATTGGGCTATATTCATAGTTCTCCTTaGCTGGATGTGGCCACCGGCAGCAGTTTGGATACA | + |
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Preference number: 3 (lower is better) Translates to: TIFVLGYIHSSP*LDVATGSSLDT Trigger: TGTATCCAAACTGCTGCCGGTGGCCACATCCAGGCAAGGAGAACTATGAATATAGCCCAATACAAAAATGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| 3UTR-3UTR CAA 90 bp | AGAAAGAAACAGGGAGCCCCAACAAGGTCTGAAAAAGTCATTAAACCACTTCCTAACATTAGCAACCCTTaGTTACTGCACCCATACATT | + |
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Preference number: 3 (lower is better) Translates to: RKKQGAPTRSEKVIKPLPNISNP*LLHPYI Trigger: AATGTATGGGTGCAGTAACAAAGGGTTGCTAATGTT...AGGAAGTGGTTTAATGACTTTTTCAGACCTTGTTGGGGCTCCCTGTTTCTTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| 3UTR-3UTR CAA 90 bp | GTGATGTTTCTTCCATTTTATACTGCTATGGGACCTAAGACTCCAGCTTTGCCATTCAAATTTCGAAAGTaGGTAGAAAGAAACAGGGAG | + |
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Preference number: 3 (lower is better) Translates to: VMFLPFYTAMGPKTPALPFKFRK*VERNRE Trigger: CTCCCTGTTTCTTTCTACCAACTTTCGAAATTTGAA...TGGCAAAGCTGGAGTCTTAGGTCCCATAGCAGTATAAAATGGAAGAAACATCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| 3UTR TCA 72 bp | ACACATGATTTCCTCTTGGGAATTCACAGACTGCTATaGACATTTGCAAGGGGAAAGAAAGTTACCTACTAC | + |
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Preference number: 3 (lower is better) Translates to: THDFLLGIHRLL*TFARGKKVTYY Trigger: GTAGTAGGTAACTTTCTTTCCCCTTGCAAATGTTCATAGCAGTCTGTGAATTCCCAAGAGGAAATCATGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| 3UTR CCA 72 bp | TGGATACACCTTTGTATGTATTATTCTCCTCTGTTGTaGGCAGTAGTAACAATGTTCCCATCACTTAAGAGT | + |
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Preference number: 3 (lower is better) Translates to: WIHLCMYYSPLL*AVVTMFPSLKS Trigger: ACTCTTAAGTGATGGGAACATTGTTACTACTGCCCACAACAGAGGAGAATAATACATACAAAGGTGTATCCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS-3UTR GCA 90 bp | GTAACAATGTTCCCATCACTTAAGAGTCAAGGCTCTTGTTTCTCCCCTCCCACCGGGGCGAGCGCTTCTTaGGGATGCTGCGGCCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: VTMFPSLKSQGSCFSPPTGASAS*GCCGQR Trigger: CCTCTGGCCGCAGCATCCGCAAGAAGCGCTCGCCCC...GGTGGGAGGGGAGAAACAAGAGCCTTGACTCTTAAGTGATGGGAACATTGTTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS-3UTR TCA 90 bp | CTTAAGAGTCAAGGCTCTTGTTTCTCCCCTCCCACCCCGCAACCTCCCAGTCCACAGCACCTGCAAAAATaGCCAGGCCATGGCAGACAT | + |
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Preference number: 4 (lower is better) Translates to: LKSQGSCFSPPTPQPPSPQHLQK*PGHGRH Trigger: ATGTCTGCCATGGCCTGGTCATTTTTGCAGGTGCTG...TGGACTGGGAGGTTGCGGGGTGGGAGGGGAGAAACAAGAGCCTTGACTCTTAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS-3UTR GCA 90 bp | CTTAAGAGTCAAGGCTCTTGTTTCTCCCCTCCCACCCCGCAACCTCCCAGTCCAAGAGGAGATGAGGTCTaGGTAGCCTCTCTGATGCGA | + |
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Preference number: 4 (lower is better) Translates to: LKSQGSCFSPPTPQPPSPRGDEV*VASLMR Trigger: TCGCATCAGAGAGGCTACGCAGACCTCATCTCCTCT...TGGACTGGGAGGTTGCGGGGTGGGAGGGGAGAAACAAGAGCCTTGACTCTTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS-3UTR TCA 90 bp | ACCCCGCAACCTCCCAGTCCATCCAGTGACTGGGAAGAGCTAAATAGTGTTGTCCTCCGATGGCCAGGGTaGTGGCTTTCTTGTACCTCT | + |
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Preference number: 4 (lower is better) Translates to: TPQPPSPSSDWEELNSVVLRWPG*WLSCTS Trigger: AGAGGTACAAGAAAGCCATCACCCTGGCCATCGGAG...GACAACACTATTTAGCTCTTCCCAGTCACTGGATGGACTGGGAGGTTGCGGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS-3UTR TCA 90 bp | GTAACAATGTTCCCATCACTTAAGAGTCAAGGCTCTTGTTTCTCCCCTCCCACCTGCGGCCAGAGGAGATaGGGTCTGCGTAGCCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: VTMFPSLKSQGSCFSPPTCGQRR*GLRSLS Trigger: AGAGAGGCTACGCAGACCTCATCTCCTCTGGCCGCA...GGTGGGAGGGGAGAAACAAGAGCCTTGACTCTTAAGTGATGGGAACATTGTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS-3UTR TCA 90 bp | AGAAAGAAACAGGGAGCCCCAACAAGGTCTGAAAAAGTCATTAAACCACTTCCTCCGTGCCATCCGCGATaGTGGCATCCAGGGGCGAGC | + |
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Preference number: 4 (lower is better) Translates to: RKKQGAPTRSEKVIKPLPPCHPR*WHPGAS Trigger: GCTCGCCCCTGGATGCCATCATCGCGGATGGCACGG...AGGAAGTGGTTTAATGACTTTTTCAGACCTTGTTGGGGCTCCCTGTTTCTTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS-3UTR GCA 90 bp | CTTAAGAGTCAAGGCTCTTGTTTCTCCCCTCCCACCCCGCAACCTCCCAGTCCACTTTGTGTCAGCACCTaGAAAAATGACCAGGCCATG | + |
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Preference number: 4 (lower is better) Translates to: LKSQGSCFSPPTPQPPSPLCVST*KNDQAM Trigger: CATGGCCTGGTCATTTTTGCAGGTGCTGACACAAAG...TGGACTGGGAGGTTGCGGGGTGGGAGGGGAGAAACAAGAGCCTTGACTCTTAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS-3UTR GCA 90 bp | GCTCACACTCAAGACCAAGCAATGGAGTTGCACATGGGCATATACACACACAATACCACCATGGCCTTCTaGTTGGGCGTGACGCGGCAG | + |
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Preference number: 4 (lower is better) Translates to: AHTQDQAMELHMGIYTHNTTMAF*LGVTRQ Trigger: CTGCCGCGTCACGCCCAAGCAGAAGGCCATGGTGGT...ATTGTGTGTGTATATGCCCATGTGCAACTCCATTGCTTGGTCTTGAGTGTGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS-3UTR CCA 90 bp | GTGATGTTTCTTCCATTTTATACTGCTATGGGACCTAAGACTCCAGCTTTGCCAAGCCGTCTCCGGCTCTaGCTCCGCATCCGCCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VMFLPFYTAMGPKTPALPSRLRL*LRIRLS Trigger: GGAGAGGCGGATGCGGAGCCAGAGCCGGAGACGGCT...TGGCAAAGCTGGAGTCTTAGGTCCCATAGCAGTATAAAATGGAAGAAACATCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS-3UTR TCA 90 bp | ACCCCGCAACCTCCCAGTCCATCCAGTGACTGGGAAGAGCTAAATAGTGTTGTCGCAGGATCAGGAGGATaGGGAAATAGAAGTTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TPQPPSPSSDWEELNSVVAGSGG*GNRSWL Trigger: CAGCCAACTTCTATTTCCTCATCCTCCTGATCCTGC...GACAACACTATTTAGCTCTTCCCAGTCACTGGATGGACTGGGAGGTTGCGGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS-3UTR TCA 90 bp | GTAACAATGTTCCCATCACTTAAGAGTCAAGGCTCTTGTTTCTCCCCTCCCACCGTTGTAGGTCCTCTCTaGGCCCAGTTCGCTGACGGT | + |
|
Preference number: 4 (lower is better) Translates to: VTMFPSLKSQGSCFSPPTVVGPL*AQFADG Trigger: ACCGTCAGCGAACTGGGCTCAGAGAGGACCTACAAC...GGTGGGAGGGGAGAAACAAGAGCCTTGACTCTTAAGTGATGGGAACATTGTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS-3UTR TCA 90 bp | ACCCCGCAACCTCCCAGTCCATCCAGTGACTGGGAAGAGCTAAATAGTGTTGTCAAGCACCAAGCGGTATaGAGAAGAGGACCATTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TPQPPSPSSDWEELNSVVKHQAV*RRGPLR Trigger: CCTCAATGGTCCTCTTCTTCATACCGCTTGGTGCTT...GACAACACTATTTAGCTCTTCCCAGTCACTGGATGGACTGGGAGGTTGCGGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS-3UTR TCA 90 bp | ACACTCAAGACCAAGCAATGGAGTTGCACATGGGCATATACACACACAATTTCCGAAGGACTGGTAGTCTaGAGGCGCCTCCCCATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TLKTKQWSCTWAYTHTISEGLVV*RRLPIL Trigger: CAGGATGGGGAGGCGCCTTCAGACTACCAGTCCTTC...GGAAATTGTGTGTGTATATGCCCATGTGCAACTCCATTGCTTGGTCTTGAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS-3UTR GCA 90 bp | CTTAAGAGTCAAGGCTCTTGTTTCTCCCCTCCCACCCCGCAACCTCCCAGTCCAGCTGCCCTCTTAAACTaGTCAAACAAATTCATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LKSQGSCFSPPTPQPPSPAALLN*SNKFMG Trigger: ACCCATGAATTTGTTTGAGCAGTTTAAGAGGGCAGC...TGGACTGGGAGGTTGCGGGGTGGGAGGGGAGAAACAAGAGCCTTGACTCTTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS-3UTR GCA 90 bp | CTTAAGAGTCAAGGCTCTTGTTTCTCCCCTCCCACCCCGCAACCTCCCAGTCCAGAGGTTAAGACCCCATaGAGCAAACTGACAAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LKSQGSCFSPPTPQPPSPEVKTP*SKLTKN Trigger: ATTCTTTGTCAGTTTGCTGCATGGGGTCTTAACCTC...TGGACTGGGAGGTTGCGGGGTGGGAGGGGAGAAACAAGAGCCTTGACTCTTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS-3UTR GCA 90 bp | CTTAAGAGTCAAGGCTCTTGTTTCTCCCCTCCCACCCCGCAACCTCCCAGTCCAAGTACAGTGCGATGCTaGCGAAAATTGAAAAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LKSQGSCFSPPTPQPPSPSTVRC*RKLKRH Trigger: ATGCCTTTTCAATTTTCGGCAGCATCGCACTGTACT...TGGACTGGGAGGTTGCGGGGTGGGAGGGGAGAAACAAGAGCCTTGACTCTTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS-3UTR CCA 90 bp | ACGAGCCACATCATCTACCAGGTCTTTGATGGCCGTGATGCCCAGCACCAAAAGGTTCTGGTTCAACCGTaGACCCCTGATCTTCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TSHIIYQVFDGRDAQHQKVLVQP*TPDLQV Trigger: AACTTGAAGATCAGGGGTCCACGGTTGAACCAGAAC...CTTTTGGTGCTGGGCATCACGGCCATCAAAGACCTGGTAGATGATGTGGCTCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237686.2 |
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| CDS-3UTR CCA 90 bp | ACACTCAAGACCAAGCAATGGAGTTGCACATGGGCATATACACACACAATTTCCCAAAGCCGAAGTTCCTaGCGGCGTTTACCAGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: TLKTKQWSCTWAYTHTISQSRSS*RRLPGR Trigger: GCGCCCTGGTAAACGCCGCCAGGAACTTCGGCTTTG...GGAAATTGTGTGTGTATATGCCCATGTGCAACTCCATTGCTTGGTCTTGAGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| 3UTR CAA 72 bp | CCATTTTATACTGCTATGGGACCTAAGACTCCAGCTTaGCCACCAAGCCACAAGGTGGCCTGCCATGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PFYTAMGPKTPA*PPSHKVACHVP Trigger: AGGAACATGGCAGGCCACCTTGTGGCTTGGTGGCAAAGCTGGAGTCTTAGGTCCCATAGCAGTATAAAATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS-3UTR TCA 90 bp | TTCATAGTTCTCCTTGCCTGGATGTGGCCACCGGCAGCAGTTTGGATACACCTTTCTTCTTCAGGCGGATaGCATCTCCAACCTGGATAT | + |
|
Preference number: 4 (lower is better) Translates to: FIVLLAWMWPPAAVWIHLSSSGG*HLQPGY Trigger: ATATCCAGGTTGGAGATGTCATCCGCCTGAAGAAGA...AAGGTGTATCCAAACTGCTGCCGGTGGCCACATCCAGGCAAGGAGAACTATGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS-3UTR TCA 90 bp | ACCCCGCAACCTCCCAGTCCATCCAGTGACTGGGAAGAGCTAAATAGTGTTGTCAGAATCTCTTATAGTTaGACAGCAAGTCCCTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: TPQPPSPSSDWEELNSVVRISYS*TASPSA Trigger: GGCAGAGGGACTTGCTGTTCAACTATAAGAGATTCT...GACAACACTATTTAGCTCTTCCCAGTCACTGGATGGACTGGGAGGTTGCGGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS-3UTR GCA 90 bp | ACACTCAAGACCAAGCAATGGAGTTGCACATGGGCATATACACACACAATTTCCACGGTGATGGTGTTCTaGGTCCGGGCGAGAAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TLKTKQWSCTWAYTHTISTVMVF*VRARKA Trigger: TGCCTTTCTCGCCCGGACGCAGAACACCATCACCGT...GGAAATTGTGTGTGTATATGCCCATGTGCAACTCCATTGCTTGGTCTTGAGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS-3UTR TCA 90 bp | TTCATAGTTCTCCTTGCCTGGATGTGGCCACCGGCAGCAGTTTGGATACACCTTTTCGGTCATTTGCTTTaGCTTGCCACGTGCAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: FIVLLAWMWPPAAVWIHLFGHLL*LATCNL Trigger: AAGATTGCACGTGGCAAGTCAAAGCAAATGACCGAA...AAGGTGTATCCAAACTGCTGCCGGTGGCCACATCCAGGCAAGGAGAACTATGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS-3UTR CCA 90 bp | GTAACAATGTTCCCATCACTTAAGAGTCAAGGCTCTTGTTTCTCCCCTCCCACCGGACCACTTCATCGTTaGGCTGAGACTCCTCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: VTMFPSLKSQGSCFSPPTGPLHR*AETPHQ Trigger: TTGATGAGGAGTCTCAGCCCAACGATGAAGTGGTCC...GGTGGGAGGGGAGAAACAAGAGCCTTGACTCTTAAGTGATGGGAACATTGTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS-3UTR CCA 90 bp | GTAACAATGTTCCCATCACTTAAGAGTCAAGGCTCTTGTTTCTCCCCTCCCACCGGAGCACAGGCAAACTaGAGTACAGCACGTTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: VTMFPSLKSQGSCFSPPTGAQAN*STARCR Trigger: TCTACAACGTGCTGTACTCCAGTTTGCCTGTGCTCC...GGTGGGAGGGGAGAAACAAGAGCCTTGACTCTTAAGTGATGGGAACATTGTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| 3UTR CAA 72 bp | CTGGATGTGGCCACCGGCAGCAGTTTGGATACACCTTaGTATGTATTATTCTCCTCTGTTGTGGGCAGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: LDVATGSSLDTP*YVLFSSVVGSS Trigger: ACTACTGCCCACAACAGAGGAGAATAATACATACAAAGGTGTATCCAAACTGCTGCCGGTGGCCACATCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS-3UTR TCA 90 bp | ACCCCGCAACCTCCCAGTCCATCCAGTGACTGGGAAGAGCTAAATAGTGTTGTCGATGCTGCCGAAAATTaGAAAGGCATTCACAAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: TPQPPSPSSDWEELNSVVDAAEN*KGIHKS Trigger: ACTTTTGTGAATGCCTTTTCAATTTTCGGCAGCATC...GACAACACTATTTAGCTCTTCCCAGTCACTGGATGGACTGGGAGGTTGCGGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS-3UTR GCA 90 bp | GTAACAATGTTCCCATCACTTAAGAGTCAAGGCTCTTGTTTCTCCCCTCCCACCACCTGTGAACTGAAATaGGGACGGAAAGAGAACGTG | + |
|
Preference number: 4 (lower is better) Translates to: VTMFPSLKSQGSCFSPPTTCELK*GRKENV Trigger: CACGTTCTCTTTCCGTCCGCATTTCAGTTCACAGGT...GGTGGGAGGGGAGAAACAAGAGCCTTGACTCTTAAGTGATGGGAACATTGTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS-3UTR GCA 90 bp | GTGATGTTTCTTCCATTTTATACTGCTATGGGACCTAAGACTCCAGCTTTGCCATGCCGCCGTTTCCACTaGTCTTCAGCCTTCAATCGC | + |
|
Preference number: 4 (lower is better) Translates to: VMFLPFYTAMGPKTPALPCRRFH*SSAFNR Trigger: GCGATTGAAGGCTGAAGAGCAGTGGAAACGGCGGCA...TGGCAAAGCTGGAGTCTTAGGTCCCATAGCAGTATAAAATGGAAGAAACATCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS-3UTR CCA 90 bp | ACCCCGCAACCTCCCAGTCCATCCAGTGACTGGGAAGAGCTAAATAGTGTTGTCATGACATCTCCAACCTaGATATCTTTCCACTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: TPQPPSPSSDWEELNSVVMTSPT*ISFHLM Trigger: CATCAAGTGGAAAGATATCCAGGTTGGAGATGTCAT...GACAACACTATTTAGCTCTTCCCAGTCACTGGATGGACTGGGAGGTTGCGGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS-3UTR CCA 90 bp | GCTCACACTCAAGACCAAGCAATGGAGTTGCACATGGGCATATACACACACAATCCCGGTAGGACGGTGTaGCATTTTCTCCATCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: AHTQDQAMELHMGIYTHNPGRTV*HFLHHR Trigger: TCTATGATGGAGAAAATGCCACACCGTCCTACCGGG...ATTGTGTGTGTATATGCCCATGTGCAACTCCATTGCTTGGTCTTGAGTGTGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS-3UTR TCA 90 bp | GTAACAATGTTCCCATCACTTAAGAGTCAAGGCTCTTGTTTCTCCCCTCCCACCAATAGTCACTGGACATaGCAGCTTGCATCCCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VTMFPSLKSQGSCFSPPTNSHWT*QLASLL Trigger: AAGAAGGGATGCAAGCTGTCATGTCCAGTGACTATT...GGTGGGAGGGGAGAAACAAGAGCCTTGACTCTTAAGTGATGGGAACATTGTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS-3UTR GCA 90 bp | GTAACAATGTTCCCATCACTTAAGAGTCAAGGCTCTTGTTTCTCCCCTCCCACCTCATTTGCTTTGACTTaGCACGTGCAATCTTTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: VTMFPSLKSQGSCFSPPTSFALT*HVQSFR Trigger: CCGGAAAGATTGCACGTGGCAAGTCAAAGCAAATGA...GGTGGGAGGGGAGAAACAAGAGCCTTGACTCTTAAGTGATGGGAACATTGTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS-3UTR GCA 90 bp | GTAACAATGTTCCCATCACTTAAGAGTCAAGGCTCTTGTTTCTCCCCTCCCACCAAGTTCTTTTGCCGCTaGTCTTTCTTCTCTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VTMFPSLKSQGSCFSPPTKFFCR*SFFSSS Trigger: GCTGGAAGAGAAGAAAGAGCAGCGGCAAAAGAACTT...GGTGGGAGGGGAGAAACAAGAGCCTTGACTCTTAAGTGATGGGAACATTGTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS-3UTR CCA 90 bp | GATCAGGAGGATGAGGAAATAGAAGTTGGCTGCCCTCTTAAACTGCTCAAACAAGGACCACTTCATCGTTaGGCTGAGACTCCTCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: DQEDEEIEVGCPLKLLKQGPLHR*AETPHQ Trigger: TTGATGAGGAGTCTCAGCCCAACGATGAAGTGGTCC...TTGTTTGAGCAGTTTAAGAGGGCAGCCAACTTCTATTTCCTCATCCTCCTGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237686.2 |
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| CDS-3UTR CCA 90 bp | GCTCACACTCAAGACCAAGCAATGGAGTTGCACATGGGCATATACACACACAATGTTCTGGTTCAACCGTaGACCCCTGATCTTCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: AHTQDQAMELHMGIYTHNVLVQP*TPDLQV Trigger: AACTTGAAGATCAGGGGTCCACGGTTGAACCAGAAC...ATTGTGTGTGTATATGCCCATGTGCAACTCCATTGCTTGGTCTTGAGTGTGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS-3UTR CCA 90 bp | TTCATAGTTCTCCTTGCCTGGATGTGGCCACCGGCAGCAGTTTGGATACACCTTTCTGATTCTCCATCCTaGTGTGAAGAAGAGAGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: FIVLLAWMWPPAAVWIHLSDSPS*CEEESL Trigger: TAAACTCTCTTCTTCACACCAGGATGGAGAATCAGA...AAGGTGTATCCAAACTGCTGCCGGTGGCCACATCCAGGCAAGGAGAACTATGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS-3UTR TCA 90 bp | ACACTCAAGACCAAGCAATGGAGTTGCACATGGGCATATACACACACAATTTCCGGATCACTTCCACACTaGCATAGAGAGAAATGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TLKTKQWSCTWAYTHTISGSLPH*HREKWA Trigger: TGCCCATTTCTCTCTATGTCAGTGTGGAAGTGATCC...GGAAATTGTGTGTGTATATGCCCATGTGCAACTCCATTGCTTGGTCTTGAGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS-3UTR TCA 90 bp | ACACTCAAGACCAAGCAATGGAGTTGCACATGGGCATATACACACACAATTTCCGCTTTCGGTCGCTGTTaGAATCCAAAATGGCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TLKTKQWSCTWAYTHTISAFGRC*NPKWQG Trigger: TCCTTGCCATTTTGGATTTCAACAGCGACCGAAAGC...GGAAATTGTGTGTGTATATGCCCATGTGCAACTCCATTGCTTGGTCTTGAGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS-3UTR TCA 90 bp | GCTCACACTCAAGACCAAGCAATGGAGTTGCACATGGGCATATACACACACAATTTCTCCATCCTGGTGTaGAGAAGAGAGTTTATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: AHTQDQAMELHMGIYTHNFSILV*RREFMS Trigger: GGACATAAACTCTCTTCTTCACACCAGGATGGAGAA...ATTGTGTGTGTATATGCCCATGTGCAACTCCATTGCTTGGTCTTGAGTGTGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS-3UTR TCA 90 bp | GCTCACACTCAAGACCAAGCAATGGAGTTGCACATGGGCATATACACACACAATGATCTTATCACTTTCTaGGGGCCAAATGGTCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: AHTQDQAMELHMGIYTHNDLITF*GPNGHG Trigger: TCCATGACCATTTGGCCCTCAGAAAGTGATAAGATC...ATTGTGTGTGTATATGCCCATGTGCAACTCCATTGCTTGGTCTTGAGTGTGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS-3UTR GCA 90 bp | TCTGTTCTGAACAGTAGACCTCTCGTTTACTTCCAGGAAACACAGGGGAAAGTTAAGTGTGGTATACCATaGCAGGGTGGAGATTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SVLNSRPLVYFQETQGKVKCGIP*QGGDLR Trigger: CCTCAAATCTCCACCCTGGCATGGTATACCACACTT...AACTTTCCCCTGTGTTTCCTGGAAGTAAACGAGAGGTCTACTGTTCAGAACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS-3UTR GCA 90 bp | GCTCACACTCAAGACCAAGCAATGGAGTTGCACATGGGCATATACACACACAATGCATCCTGTGTTTCTTaGTTCGTAGGATTCATCCGA | + |
|
Preference number: 4 (lower is better) Translates to: AHTQDQAMELHMGIYTHNASCVS*FVGFIR Trigger: TCGGATGAATCCTACGAAGCAAGAAACACAGGATGC...ATTGTGTGTGTATATGCCCATGTGCAACTCCATTGCTTGGTCTTGAGTGTGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS-3UTR CCA 90 bp | TCTGTTCTGAACAGTAGACCTCTCGTTTACTTCCAGGAAACACAGGGGAAAGTTAAAATGACCAGGCCATaGCAGACATCGGTGTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SVLNSRPLVYFQETQGKVKMTRP*QTSVFL Trigger: AAGGAACACCGATGTCTGCCATGGCCTGGTCATTTT...AACTTTCCCCTGTGTTTCCTGGAAGTAAACGAGAGGTCTACTGTTCAGAACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS-3UTR CCA 90 bp | ACACTCAAGACCAAGCAATGGAGTTGCACATGGGCATATACACACACAATTTCCTTTCTGAGGGCCAAATaGTCATGGACAGGAAACGGA | + |
|
Preference number: 4 (lower is better) Translates to: TLKTKQWSCTWAYTHTISFLRAK*SWTGNG Trigger: TCCGTTTCCTGTCCATGACCATTTGGCCCTCAGAAA...GGAAATTGTGTGTGTATATGCCCATGTGCAACTCCATTGCTTGGTCTTGAGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS-3UTR CCA 90 bp | GTAACAATGTTCCCATCACTTAAGAGTCAAGGCTCTTGTTTCTCCCCTCCCACCCGCTTTCGATGCTTCTaGATCTTATCACTTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VTMFPSLKSQGSCFSPPTRFRCF*ILSLSE Trigger: CTCAGAAAGTGATAAGATCCAGAAGCATCGAAAGCG...GGTGGGAGGGGAGAAACAAGAGCCTTGACTCTTAAGTGATGGGAACATTGTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS-3UTR TCA 90 bp | GCTCACACTCAAGACCAAGCAATGGAGTTGCACATGGGCATATACACACACAATAGAACTTGGTGTTCATaGAATGAGGTTGTTCGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: AHTQDQAMELHMGIYTHNRTWCS*NEVVRG Trigger: TCCACGAACAACCTCATTTCATGAACACCAAGTTCT...ATTGTGTGTGTATATGCCCATGTGCAACTCCATTGCTTGGTCTTGAGTGTGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS-3UTR TCA 90 bp | AGAAAGAAACAGGGAGCCCCAACAAGGTCTGAAAAAGTCATTAAACCACTTCCTAAGCCGCCTGGTAGTTaGTCTGACCATCAATTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RKKQGAPTRSEKVIKPLPKPPGS*SDHQFC Trigger: ACAGAATTGATGGTCAGATCAACTACCAGGCGGCTT...AGGAAGTGGTTTAATGACTTTTTCAGACCTTGTTGGGGCTCCCTGTTTCTTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS-3UTR TCA 90 bp | AGAAAGAAACAGGGAGCCCCAACAAGGTCTGAAAAAGTCATTAAACCACTTCCTGGGCTGAGTAGCCATTaGAGAAGGAGTACCAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: RKKQGAPTRSEKVIKPLPGLSSH*RRSTRN Trigger: ATTTCTGGTACTCCTTCTTCAATGGCTACTCAGCCC...AGGAAGTGGTTTAATGACTTTTTCAGACCTTGTTGGGGCTCCCTGTTTCTTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS-3UTR TCA 90 bp | GCTCACACTCAAGACCAAGCAATGGAGTTGCACATGGGCATATACACACACAATCCCCATGCAGCAAACTaGCAAAGAATCTCTTATAGT | + |
|
Preference number: 4 (lower is better) Translates to: AHTQDQAMELHMGIYTHNPHAAN*QRISYS Trigger: ACTATAAGAGATTCTTTGTCAGTTTGCTGCATGGGG...ATTGTGTGTGTATATGCCCATGTGCAACTCCATTGCTTGGTCTTGAGTGTGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS-3UTR GCA 90 bp | GTAACAATGTTCCCATCACTTAAGAGTCAAGGCTCTTGTTTCTCCCCTCCCACCGAAATAGAAGTTGGCTaGCCTCTTAAACTGCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VTMFPSLKSQGSCFSPPTEIEVG*PLKLLK Trigger: TTTGAGCAGTTTAAGAGGGCAGCCAACTTCTATTTC...GGTGGGAGGGGAGAAACAAGAGCCTTGACTCTTAAGTGATGGGAACATTGTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS-3UTR GCA 90 bp | AGAAAGAAACAGGGAGCCCCAACAAGGTCTGAAAAAGTCATTAAACCACTTCCTGGAGATTTGAGGAATTaGCTGCAGGATCAGGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RKKQGAPTRSEKVIKPLPGDLRN*LQDQED Trigger: ATCCTCCTGATCCTGCAGGCAATTCCTCAAATCTCC...AGGAAGTGGTTTAATGACTTTTTCAGACCTTGTTGGGGCTCCCTGTTTCTTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS-3UTR GCA 90 bp | TCTGTTCTGAACAGTAGACCTCTCGTTTACTTCCAGGAAACACAGGGGAAAGTTTCCACGAAGTTCTTTTaGCGCTGCTCTTTCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SVLNSRPLVYFQETQGKVSTKFF*RCSFFS Trigger: AGAGAAGAAAGAGCAGCGGCAAAAGAACTTCGTGGA...AACTTTCCCCTGTGTTTCCTGGAAGTAAACGAGAGGTCTACTGTTCAGAACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS-3UTR CCA 90 bp | GTAACAATGTTCCCATCACTTAAGAGTCAAGGCTCTTGTTTCTCCCCTCCCACCTCCAAAGGAAAGCTTTaGTTCTTCCAAAACAGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: VTMFPSLKSQGSCFSPPTSKGKL*FFQNSV Trigger: AACGCTGTTTTGGAAGAACCAAAGCTTTCCTTTGGA...GGTGGGAGGGGAGAAACAAGAGCCTTGACTCTTAAGTGATGGGAACATTGTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS-3UTR CCA 90 bp | GTAACAATGTTCCCATCACTTAAGAGTCAAGGCTCTTGTTTCTCCCCTCCCACCATTCCAACACCAATGTaGGCAGTTTTGATCATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VTMFPSLKSQGSCFSPPTIPTPM*AVLIML Trigger: CAACATGATCAAAACTGCCCACATTGGTGTTGGAAT...GGTGGGAGGGGAGAAACAAGAGCCTTGACTCTTAAGTGATGGGAACATTGTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS-3UTR CCA 90 bp | TCTGTTCTGAACAGTAGACCTCTCGTTTACTTCCAGGAAACACAGGGGAAAGTTTGTATCCCAGCACTGTaGAAATCAAACATGATGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SVLNSRPLVYFQETQGKVCIPAL*KSNMMP Trigger: CGGCATCATGTTTGATTTCCACAGTGCTGGGATACA...AACTTTCCCCTGTGTTTCCTGGAAGTAAACGAGAGGTCTACTGTTCAGAACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS-3UTR TCA 90 bp | GCTCACACTCAAGACCAAGCAATGGAGTTGCACATGGGCATATACACACACAATGTTCTTCACATTCGATaGAACCATCAAATGTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AHTQDQAMELHMGIYTHNVLHIR*NHQMLP Trigger: TGGCAACATTTGATGGTTTCATCGAATGTGAAGAAC...ATTGTGTGTGTATATGCCCATGTGCAACTCCATTGCTTGGTCTTGAGTGTGAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS-3UTR TCA 90 bp | TCTGTTCTGAACAGTAGACCTCTCGTTTACTTCCAGGAAACACAGGGGAAAGTTACCGCTGCAGATATCTaGACTGAGCAAAAGAATAGT | + |
|
Preference number: 4 (lower is better) Translates to: SVLNSRPLVYFQETQGKVTAADI*TEQKNS Trigger: ACTATTCTTTTGCTCAGTTCAGATATCTGCAGCGGT...AACTTTCCCCTGTGTTTCCTGGAAGTAAACGAGAGGTCTACTGTTCAGAACAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS-3UTR GCA 90 bp | GCTCACACTCAAGACCAAGCAATGGAGTTGCACATGGGCATATACACACACAATAGTATCGTAGGAACTTaGACATCCTTATGTAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: AHTQDQAMELHMGIYTHNSIVGT*TSLCKT Trigger: GGTCTTACATAAGGATGTGCAAGTTCCTACGATACT...ATTGTGTGTGTATATGCCCATGTGCAACTCCATTGCTTGGTCTTGAGTGTGAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS-3UTR CCA 90 bp | GTGATGTTTCTTCCATTTTATACTGCTATGGGACCTAAGACTCCAGCTTTGCCATATACCATGCCAGGGTaGAGATTTGAGGAATTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VMFLPFYTAMGPKTPALPYTMPG*RFEELP Trigger: AGGCAATTCCTCAAATCTCCACCCTGGCATGGTATA...TGGCAAAGCTGGAGTCTTAGGTCCCATAGCAGTATAAAATGGAAGAAACATCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS-3UTR TCA 90 bp | ACACTCAAGACCAAGCAATGGAGTTGCACATGGGCATATACACACACAATTTCCTTGGTGTTCATGAAATaGGGTTGTTCGTGGAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: TLKTKQWSCTWAYTHTISLVFMK*GCSWNF Trigger: AAAGTTCCACGAACAACCTCATTTCATGAACACCAA...GGAAATTGTGTGTGTATATGCCCATGTGCAACTCCATTGCTTGGTCTTGAGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS-3UTR TCA 90 bp | AGAAAGAAACAGGGAGCCCCAACAAGGTCTGAAAAAGTCATTAAACCACTTCCTCACAAAAGTCCAGTATaGAGTATCCAAGCCAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: RKKQGAPTRSEKVIKPLPHKSPV*SIQANL Trigger: CAGATTGGCTTGGATACTTCATACTGGACTTTTGTG...AGGAAGTGGTTTAATGACTTTTTCAGACCTTGTTGGGGCTCCCTGTTTCTTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS-3UTR TCA 90 bp | AGAAAGAAACAGGGAGCCCCAACAAGGTCTGAAAAAGTCATTAAACCACTTCCTTTTCCAGGGCCATTTTaGACTTCAAATTGGTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RKKQGAPTRSEKVIKPLPFPGPF*TSNWFL Trigger: GAGAAACCAATTTGAAGTTCAAAATGGCCCTGGAAA...AGGAAGTGGTTTAATGACTTTTTCAGACCTTGTTGGGGCTCCCTGTTTCTTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS-3UTR GCA 90 bp | ACACTCAAGACCAAGCAATGGAGTTGCACATGGGCATATACACACACAATTTCCGTAATGGTCATAAAATaGAAGCTTTCCATCGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: TLKTKQWSCTWAYTHTISVMVIK*KLSIGK Trigger: TTTGCCGATGGAAAGCTTGCATTTTATGACCATTAC...GGAAATTGTGTGTGTATATGCCCATGTGCAACTCCATTGCTTGGTCTTGAGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| 3UTR CAA 72 bp | CATTCAATCAAGGAAACTTGTTTCAAATTTCGAAAGTaGGTAGAAAGAAACAGGGAGCCCCAACAAGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HSIKETCFKFRK*VERNREPQQGL Trigger: CAGACCTTGTTGGGGCTCCCTGTTTCTTTCTACCAACTTTCGAAATTTGAAACAAGTTTCCTTGATTGAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| 3UTR CAA 72 bp | ACCACTTCCTGTCAGGTGATAAACATTAGCAACCCTTaGTTACTGCACCCATACATTAAAAACAGATTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TTSCQVINISNP*LLHPYIKNRFS Trigger: AGAAAATCTGTTTTTAATGTATGGGTGCAGTAACAAAGGGTTGCTAATGTTTATCACCTGACAGGAAGTGGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS TCA 90 bp | GGAGATGAGGTCTGCGTAGCCTCTCTGATGCGAAAAGGCATAGGCTaGGCGCCTGGAAGATACTCCCCTCCGGAACACGCTCTGCCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: GDEVCVASLMRKGIG*APGRYSPPEHALPP Trigger: CGGCGGCAGAGCGTGTTCCGGAGGGGAGTATCTTCCAGGCGCTCAGCCTATGCCTTTTCGCATCAGAGAGGCTACGCAGACCTCATCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS TCA 90 bp | CATCCAGGGGCGAGCGCTTCTTGCGGATGCTGCGGCCAGAGGAGATaGGGTCTGCGTAGCCTCTCTGATGCGAAAAGGCATAGGCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: HPGASASCGCCGQRR*GLRSLSDAKRHRLS Trigger: GCTCAGCCTATGCCTTTTCGCATCAGAGAGGCTACGCAGACCTCATCTCCTCTGGCCGCAGCATCCGCAAGAAGCGCTCGCCCCTGGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS CCA 90 bp | TTCTTTTGCCGCTGCTCTTTCTTCTCTTCCAGCCGTCTCCGGCTCTaGCTCCGCATCCGCCTCTCCTCCTCTGTCCTTGGGAACTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FFCRCSFFSSSRLRL*LRIRLSSSVLGNFS Trigger: GCTGAAGTTCCCAAGGACAGAGGAGGAGAGGCGGATGCGGAGCCAGAGCCGGAGACGGCTGGAAGAGAAGAAAGAGCAGCGGCAAAAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025482.10 ENSMUST00000235459.2 |
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| CDS TCA 90 bp | GTCGCTGTTGAAATCCAAAATGGCAAGGACGTTGTAGGTCCTCTCTaGGCCCAGTTCGCTGACGGTGATGGTGTTCTGCGTCCGGGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: VAVEIQNGKDVVGPL*AQFADGDGVLRPGE Trigger: CTCGCCCGGACGCAGAACACCATCACCGTCAGCGAACTGGGCTCAGAGAGGACCTACAACGTCCTTGCCATTTTGGATTTCAACAGCGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS TCA 90 bp | AACGGATGGCGACGACAGGTAGTAAGCACACGGCAACCGTCAGGATaGTGGTCAGCCAGATGTATGGCTGTCTCAGGGCATTGGAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: NGWRRQVVSTRQPSG*WSARCMAVSGHWKL Trigger: CAGCTTCCAATGCCCTGAGACAGCCATACATCTGGCTGACCATCATCCTGACGGTTGCCGTGTGCTTACTACCTGTCGTCGCCATCCGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS GCA 90 bp | AGGACGGTGTGGCATTTTCTCCATCATAGAGGTACCAGGAATAATTaGCAACTTGGGCTTCCCAATAGGCGTGGCCAATGGCGAGGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: RTVWHFLHHRGTRNN*QLGLPNRRGQWRGR Trigger: CCGGCCTCGCCATTGGCCACGCCTATTGGGAAGCCCAAGTTGGCAATTATTCCTGGTACCTCTATGATGGAGAAAATGCCACACCGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS-3UTR CAA 90 bp | CTTAAGAGTCAAGGCTCTTGTTTCTCCCCTCCCACCCCGCAACCTCCCAGTCCATCTGCAGTTTCCTTTTaGTCTCCGGTGAGTACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LKSQGSCFSPPTPQPPSPSAVSF*SPVSTQ Trigger: CTGGGTACTCACCGGAGACAAAAAGGAAACTGCAGA...TGGACTGGGAGGTTGCGGGGTGGGAGGGGAGAAACAAGAGCCTTGACTCTTAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS-3UTR CAA 90 bp | CTTAAGAGTCAAGGCTCTTGTTTCTCCCCTCCCACCCCGCAACCTCCCAGTCCAACTGGACATGACAGCTaGCATCCCTTCTTGTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: LKSQGSCFSPPTPQPPSPTGHDS*HPFLST Trigger: AGTGGACAAGAAGGGATGCAAGCTGTCATGTCCAGT...TGGACTGGGAGGTTGCGGGGTGGGAGGGGAGAAACAAGAGCCTTGACTCTTAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS GCA 90 bp | CTGGAAGATACTCCCCTCCGGAACACGCTCTGCCGCCGTTTCCACTaGTCTTCAGCCTTCAATCGCTTTCGATGCTTCTGGATCTTATCA | + |
|
Preference number: 5 (lower is better) Translates to: LEDTPLRNTLCRRFH*SSAFNRFRCFWILS Trigger: TGATAAGATCCAGAAGCATCGAAAGCGATTGAAGGCTGAAGAGCAGTGGAAACGGCGGCAGAGCGTGTTCCGGAGGGGAGTATCTTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS-3UTR CAA 90 bp | GTAACAATGTTCCCATCACTTAAGAGTCAAGGCTCTTGTTTCTCCCCTCCCACCGTGGTGGTCCTCGCCTaGGCAGGAGTGTCCTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: VTMFPSLKSQGSCFSPPTVVVLA*AGVSFS Trigger: TGAGAAGGACACTCCTGCCAAGGCGAGGACCACCAC...GGTGGGAGGGGAGAAACAAGAGCCTTGACTCTTAAGTGATGGGAACATTGTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS-3UTR CAA 90 bp | GCTCACACTCAAGACCAAGCAATGGAGTTGCACATGGGCATATACACACACAATAACGCTTCGTCTCGGTaGCTTGAGGCCACGCTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: AHTQDQAMELHMGIYTHNNASSR*LEATLA Trigger: CGCCAGCGTGGCCTCAAGCAACCGAGACGAAGCGTT...ATTGTGTGTGTATATGCCCATGTGCAACTCCATTGCTTGGTCTTGAGTGTGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS-3UTR CAA 90 bp | CTTAAGAGTCAAGGCTCTTGTTTCTCCCCTCCCACCCCGCAACCTCCCAGTCCAAGCTTGCATCCCTTCTaGTCCACTTATTCCAACACC | + |
|
Preference number: 5 (lower is better) Translates to: LKSQGSCFSPPTPQPPSPSLHPF*STYSNT Trigger: GGTGTTGGAATAAGTGGACAAGAAGGGATGCAAGCT...TGGACTGGGAGGTTGCGGGGTGGGAGGGGAGAAACAAGAGCCTTGACTCTTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS-3UTR CAA 90 bp | GTGATGTTTCTTCCATTTTATACTGCTATGGGACCTAAGACTCCAGCTTTGCCAAGGGGCGAGCGCTTCTaGCGGATGCTGCGGCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: VMFLPFYTAMGPKTPALPRGERF*RMLRPE Trigger: CTCTGGCCGCAGCATCCGCAAGAAGCGCTCGCCCCT...TGGCAAAGCTGGAGTCTTAGGTCCCATAGCAGTATAAAATGGAAGAAACATCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS GCA 90 bp | CTCTGCCGCCGTTTCCACTGCTCTTCAGCCTTCAATCGCTTTCGATaGTTCTGGATCTTATCACTTTCTGAGGGCCAAATGGTCATGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LCRRFHCSSAFNRFR*FWILSLSEGQMVMD Trigger: GTCCATGACCATTTGGCCCTCAGAAAGTGATAAGATCCAGAAGCATCGAAAGCGATTGAAGGCTGAAGAGCAGTGGAAACGGCGGCAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS-3UTR CAA 90 bp | TTCATAGTTCTCCTTGCCTGGATGTGGCCACCGGCAGCAGTTTGGATACACCTTGGAATAATTGCCAACTaGGGCTTCCCAATAGGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: FIVLLAWMWPPAAVWIHLGIIAN*GFPIGV Trigger: CACGCCTATTGGGAAGCCCAAGTTGGCAATTATTCC...AAGGTGTATCCAAACTGCTGCCGGTGGCCACATCCAGGCAAGGAGAACTATGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS-3UTR CAA 90 bp | TTCATAGTTCTCCTTGCCTGGATGTGGCCACCGGCAGCAGTTTGGATACACCTTTTTGCTGTGGCTGTGTaGAGAAGCATCTCGATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: FIVLLAWMWPPAAVWIHLFAVAV*RSISMV Trigger: GACCATCGAGATGCTTCTCAACACAGCCACAGCAAA...AAGGTGTATCCAAACTGCTGCCGGTGGCCACATCCAGGCAAGGAGAACTATGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS-3UTR CAA 90 bp | CTTAAGAGTCAAGGCTCTTGTTTCTCCCCTCCCACCCCGCAACCTCCCAGTCCAAGGATCTTACTTCTCTaGGTCTTCTTCTCTAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LKSQGSCFSPPTPQPPSPRILLL*VFFSRR Trigger: CCTTCTAGAGAAGAAGACCAAGAGAAGTAAGATCCT...TGGACTGGGAGGTTGCGGGGTGGGAGGGGAGAAACAAGAGCCTTGACTCTTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS CCA 90 bp | TTCGATGCTTCTGGATCTTATCACTTTCTGAGGGCCAAATGGTCATaGACAGGAAACGGATGGCGACGACAGGTAGTAAGCACACGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: FDASGSYHFLRAKWS*TGNGWRRQVVSTRQ Trigger: TTGCCGTGTGCTTACTACCTGTCGTCGCCATCCGTTTCCTGTCCATGACCATTTGGCCCTCAGAAAGTGATAAGATCCAGAAGCATCGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS CCA 90 bp | CGCCGTTTCCACTGCTCTTCAGCCTTCAATCGCTTTCGATGCTTCTaGATCTTATCACTTTCTGAGGGCCAAATGGTCATGGACAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: RRFHCSSAFNRFRCF*ILSLSEGQMVMDRK Trigger: TTTCCTGTCCATGACCATTTGGCCCTCAGAAAGTGATAAGATCCAGAAGCATCGAAAGCGATTGAAGGCTGAAGAGCAGTGGAAACGGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS-3UTR CAA 90 bp | ACCCCGCAACCTCCCAGTCCATCCAGTGACTGGGAAGAGCTAAATAGTGTTGTCACTCCTCATCAAATGTaGTTTCCGAGTCTCTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: TPQPPSPSSDWEELNSVVTPHQM*FPSLFL Trigger: CAGAAAGAGACTCGGAAACAACATTTGATGAGGAGT...GACAACACTATTTAGCTCTTCCCAGTCACTGGATGGACTGGGAGGTTGCGGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS-3UTR CAA 90 bp | GCTCACACTCAAGACCAAGCAATGGAGTTGCACATGGGCATATACACACACAATTCTCCTCCTCTGTCCTaGGGAACTTCAGCTTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: AHTQDQAMELHMGIYTHNSPPLS*GTSASG Trigger: TCCTGAAGCTGAAGTTCCCAAGGACAGAGGAGGAGA...ATTGTGTGTGTATATGCCCATGTGCAACTCCATTGCTTGGTCTTGAGTGTGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS TCA 90 bp | TCCGTCGAGCTCAGCCGTTTCTACATAGCAGAGGCTGTTAGGCTCTaGACTGGACAACAGCAGGATGTCAGCTGGAATAAAATCATTCTT | + |
|
Preference number: 5 (lower is better) Translates to: SVELSRFYIAEAVRL*TGQQQDVSWNKIIL Trigger: AAGAATGATTTTATTCCAGCTGACATCCTGCTGTTGTCCAGTTCAGAGCCTAACAGCCTCTGCTATGTAGAAACGGCTGAGCTCGACGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS TCA 90 bp | CGGACGGAAAGAGAACGTGTATCCCAGCACTGTGGAAATCAAACATaGTGCCGAAGTACAGTGCGATGCTGCCGAAAATTGAAAAGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: RTERERVSQHCGNQT*CRSTVRCCRKLKRH Trigger: ATGCCTTTTCAATTTTCGGCAGCATCGCACTGTACTTCGGCATCATGTTTGATTTCCACAGTGCTGGGATACACGTTCTCTTTCCGTCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS TCA 90 bp | TGCAATCTTTCCGGAATGTCTCTCTCTTCTTCTCAGCTTCTCTGTTaGCACGATTCTGTTCTGGTTCAACCGTGGACCCCTGATCTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: CNLSGMSLSSSQLLC*HDSVLVQPWTPDLQ Trigger: TTGAAGATCAGGGGTCCACGGTTGAACCAGAACAGAATCGTGTCAACAGAGAAGCTGAGAAGAAGAGAGAGACATTCCGGAAAGATTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS TCA 90 bp | CTCAATCTCCTCGTACACTTTATCCAACGCTTCGTCTCGGTTGCTTaGGGCCACGCTGGCGGCCATAAACTTATTATTCCATTCTGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: LNLLVHFIQRFVSVA*GHAGGHKLIIPFCK Trigger: TTTACAGAATGGAATAATAAGTTTATGGCCGCCAGCGTGGCCTCAAGCAACCGAGACGAAGCGTTGGATAAAGTGTACGAGGAGATTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS CCA 90 bp | GTTCGTCTTCAGTTTCATCATCACTGTAGGGGACCACTTCATCGTTaGGCTGAGACTCCTCATCAAATGTTGTTTCCGAGTCTCTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: VRLQFHHHCRGPLHR*AETPHQMLFPSLFL Trigger: CAGAAAGAGACTCGGAAACAACATTTGATGAGGAGTCTCAGCCCAACGATGAAGTGGTCCCCTACAGTGATGATGAAACTGAAGACGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025482.10 ENSMUST00000237686.2 |
||
| CDS CCA 90 bp | TGTCTCTCTCTTCTTCTCAGCTTCTCTGTTGACACGATTCTGTTCTaGTTCAACCGTGGACCCCTGATCTTCAAGTTCGTCTTCAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: CLSLLLSFSVDTILF*FNRGPLIFKFVFSF Trigger: GAAACTGAAGACGAACTTGAAGATCAGGGGTCCACGGTTGAACCAGAACAGAATCGTGTCAACAGAGAAGCTGAGAAGAAGAGAGAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025482.10 ENSMUST00000237686.2 |
||
| CDS-3UTR CAA 90 bp | AGGTACAAGTGTGGTATACCATGCCAGGGTGGAGATTTGAGGAATTGCCTGCAGACTCCTCATCAAATGTaGTTTCCGAGTCTCTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: RYKCGIPCQGGDLRNCLQTPHQM*FPSLFL Trigger: CAGAAAGAGACTCGGAAACAACATTTGATGAGGAGT...CTGCAGGCAATTCCTCAAATCTCCACCCTGGCATGGTATACCACACTTGTACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237686.2 |
||
| CDS-3UTR CAA 90 bp | GCTCACACTCAAGACCAAGCAATGGAGTTGCACATGGGCATATACACACACAATGTCATTTGCTTTGACTaGCCACGTGCAATCTTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: AHTQDQAMELHMGIYTHNVICFD*PRAIFP Trigger: CGGAAAGATTGCACGTGGCAAGTCAAAGCAAATGAC...ATTGTGTGTGTATATGCCCATGTGCAACTCCATTGCTTGGTCTTGAGTGTGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS-3UTR CAA 90 bp | TCTGTTCTGAACAGTAGACCTCTCGTTTACTTCCAGGAAACACAGGGGAAAGTTCGCTTTCGGTCGCTGTaGAAATCCAAAATGGCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SVLNSRPLVYFQETQGKVRFRSL*KSKMAR Trigger: CCTTGCCATTTTGGATTTCAACAGCGACCGAAAGCG...AACTTTCCCCTGTGTTTCCTGGAAGTAAACGAGAGGTCTACTGTTCAGAACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS-3UTR CAA 90 bp | GTAACAATGTTCCCATCACTTAAGAGTCAAGGCTCTTGTTTCTCCCCTCCCACCACTCCATCCTGTAGCTaGTCTTCAATAGCAGTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: VTMFPSLKSQGSCFSPPTTPSCS*SSIAVA Trigger: AGCTACTGCTATTGAAGACAAGCTACAGGATGGAGT...GGTGGGAGGGGAGAAACAAGAGCCTTGACTCTTAAGTGATGGGAACATTGTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS-3UTR CAA 90 bp | GTGATGTTTCTTCCATTTTATACTGCTATGGGACCTAAGACTCCAGCTTTGCCAATCCTGTCCCACTGTTaGCAGATAAGCACCAAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: VMFLPFYTAMGPKTPALPILSHC*QISTKR Trigger: CCGCTTGGTGCTTATCTGCAAACAGTGGGACAGGAT...TGGCAAAGCTGGAGTCTTAGGTCCCATAGCAGTATAAAATGGAAGAAACATCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS-3UTR CAA 90 bp | AGAAAGAAACAGGGAGCCCCAACAAGGTCTGAAAAAGTCATTAAACCACTTCCTGGCATCCTGTGTTTCTaGCTTCGTAGGATTCATCCG | + |
|
Preference number: 5 (lower is better) Translates to: RKKQGAPTRSEKVIKPLPGILCF*LRRIHP Trigger: CGGATGAATCCTACGAAGCAAGAAACACAGGATGCC...AGGAAGTGGTTTAATGACTTTTTCAGACCTTGTTGGGGCTCCCTGTTTCTTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS-3UTR CAA 90 bp | GTAACAATGTTCCCATCACTTAAGAGTCAAGGCTCTTGTTTCTCCCCTCCCACCCCAATGTGGGCAGTTTaGATCATGTTGACATCATTG | + |
|
Preference number: 5 (lower is better) Translates to: VTMFPSLKSQGSCFSPPTPMWAV*IMLTSL Trigger: CAATGATGTCAACATGATCAAAACTGCCCACATTGG...GGTGGGAGGGGAGAAACAAGAGCCTTGACTCTTAAGTGATGGGAACATTGTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS GCA 90 bp | CTTGGTGTTCATGAAATGAGGTTGTTCGTGGAACTTTCGGTCATTTaGTTTGACTTGCCACGTGCAATCTTTCCGGAATGTCTCTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LGVHEMRLFVELSVI*FDLPRAIFPECLSL Trigger: AAGAGAGAGACATTCCGGAAAGATTGCACGTGGCAAGTCAAAGCAAATGACCGAAAGTTCCACGAACAACCTCATTTCATGAACACCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS-3UTR CAA 90 bp | GTGATGTTTCTTCCATTTTATACTGCTATGGGACCTAAGACTCCAGCTTTGCCAGTTCATGAAATGAGGTaGTTCGTGGAACTTTCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: VMFLPFYTAMGPKTPALPVHEMR*FVELSV Trigger: GACCGAAAGTTCCACGAACAACCTCATTTCATGAAC...TGGCAAAGCTGGAGTCTTAGGTCCCATAGCAGTATAAAATGGAAGAAACATCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS-3UTR CAA 90 bp | GTAACAATGTTCCCATCACTTAAGAGTCAAGGCTCTTGTTTCTCCCCTCCCACCATTTCCAGGGCCATTTaGAACTTCAAATTGGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VTMFPSLKSQGSCFSPPTISRAI*NFKLVS Trigger: AGAAACCAATTTGAAGTTCAAAATGGCCCTGGAAAT...GGTGGGAGGGGAGAAACAAGAGCCTTGACTCTTAAGTGATGGGAACATTGTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS-3UTR CAA 90 bp | TCTGTTCTGAACAGTAGACCTCTCGTTTACTTCCAGGAAACACAGGGGAAAGTTCAGCTTTTGCAAGTTTaGAAATGGTTTCTGGGACTC | + |
|
Preference number: 5 (lower is better) Translates to: SVLNSRPLVYFQETQGKVQLLQV*KWFLGL Trigger: GAGTCCCAGAAACCATTTCAAAACTTGCAAAAGCTG...AACTTTCCCCTGTGTTTCCTGGAAGTAAACGAGAGGTCTACTGTTCAGAACAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS-3UTR CAA 90 bp | ACACTCAAGACCAAGCAATGGAGTTGCACATGGGCATATACACACACAATTTCCACTTCACACGTCCTATaGTTGATTTCCTTGTCCATT | + |
|
Preference number: 5 (lower is better) Translates to: TLKTKQWSCTWAYTHTISTSHVL*LISLSI Trigger: AATGGACAAGGAAATCAACAATAGGACGTGTGAAGT...GGAAATTGTGTGTGTATATGCCCATGTGCAACTCCATTGCTTGGTCTTGAGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS-3UTR CAA 90 bp | AGAAAGAAACAGGGAGCCCCAACAAGGTCTGAAAAAGTCATTAAACCACTTCCTATCCAAAGGAAAGCTTaGGTTCTTCCAAAACAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: RKKQGAPTRSEKVIKPLPIQRKA*VLPKQR Trigger: ACGCTGTTTTGGAAGAACCAAAGCTTTCCTTTGGAT...AGGAAGTGGTTTAATGACTTTTTCAGACCTTGTTGGGGCTCCCTGTTTCTTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS CCA 90 bp | GCTGGAATAAAATCATTCTTCTTCAGGCGGATGACATCTCCAACCTaGATATCTTTCCACTTGATGATTTTGAACCTGCCATCCTTAATG | + |
|
Preference number: 5 (lower is better) Translates to: AGIKSFFFRRMTSPT*ISFHLMILNLPSLM Trigger: CATTAAGGATGGCAGGTTCAAAATCATCAAGTGGAAAGATATCCAGGTTGGAGATGTCATCCGCCTGAAGAAGAATGATTTTATTCCAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS-3UTR CAA 90 bp | GTGATGTTTCTTCCATTTTATACTGCTATGGGACCTAAGACTCCAGCTTTGCCATTCCACTTGATGATTTaGAACCTGCCATCCTTAATG | + |
|
Preference number: 5 (lower is better) Translates to: VMFLPFYTAMGPKTPALPFHLMI*NLPSLM Trigger: CATTAAGGATGGCAGGTTCAAAATCATCAAGTGGAA...TGGCAAAGCTGGAGTCTTAGGTCCCATAGCAGTATAAAATGGAAGAAACATCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS TCA 90 bp | GCATATTTGCTCTCCTTAATACAAAAGAACTTGGTGTTCATGAAATaGGGTTGTTCGTGGAACTTTCGGTCATTTGCTTTGACTTGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: AYLLSLIQKNLVFMK*GCSWNFRSFALTCH Trigger: GTGGCAAGTCAAAGCAAATGACCGAAAGTTCCACGAACAACCTCATTTCATGAACACCAAGTTCTTTTGTATTAAGGAGAGCAAATATGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS-3UTR CAA 90 bp | GTGATGTTTCTTCCATTTTATACTGCTATGGGACCTAAGACTCCAGCTTTGCCAGCATTACTCGCATATTaGCTCTCCTTAATACAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: VMFLPFYTAMGPKTPALPALLAY*LSLIQK Trigger: CTTTTGTATTAAGGAGAGCAAATATGCGAGTAATGC...TGGCAAAGCTGGAGTCTTAGGTCCCATAGCAGTATAAAATGGAAGAAACATCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS-3UTR CAA 90 bp | GTGATGTTTCTTCCATTTTATACTGCTATGGGACCTAAGACTCCAGCTTTGCCATCACACGTCCTATTGTaGATTTCCTTGTCCATTTTA | + |
|
Preference number: 5 (lower is better) Translates to: VMFLPFYTAMGPKTPALPSHVLL*ISLSIL Trigger: TAAAATGGACAAGGAAATCAACAATAGGACGTGTGA...TGGCAAAGCTGGAGTCTTAGGTCCCATAGCAGTATAAAATGGAAGAAACATCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS TCA 90 bp | AATCGAAAGCAAAAAGAAGAACTGTCGTACTTCTGGCTCTTTCCCTaGCTGTATTTGCTCGATAAGGTAATGGTCATAAAATGCAAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: NRKQKEELSYFWLFP*LYLLDKVMVIKCKL Trigger: AAGCTTGCATTTTATGACCATTACCTTATCGAGCAAATACAGTCAGGGAAAGAGCCAGAAGTACGACAGTTCTTCTTTTTGCTTTCGATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS CCA 90 bp | TCACATTCGATGAAACCATCAAATGTTGCCAAGTTATCTTCTATTTaGAGATATTGGTCCGTGATTTCCAGGGCCATTTTGAACTTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: SHSMKPSNVAKLSSI*RYWSVISRAILNFK Trigger: TTTGAAGTTCAAAATGGCCCTGGAAATCACGGACCAATATCTCCAAATAGAAGATAACTTGGCAACATTTGATGGTTTCATCGAATGTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS CCA 90 bp | ATGAAACCATCAAATGTTGCCAAGTTATCTTCTATTTGGAGATATTaGTCCGTGATTTCCAGGGCCATTTTGAACTTCAAATTGGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: MKPSNVAKLSSIWRY*SVISRAILNFKLVS Trigger: AGAAACCAATTTGAAGTTCAAAATGGCCCTGGAAATCACGGACCAATATCTCCAAATAGAAGATAACTTGGCAACATTTGATGGTTTCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS TCA 72 bp | CCACTGTGCGCCGGTACTCAGCCGTGCCATCCGCGATaGTGGCATCCAGGGGCGAGCGCTTCTTGCGGATGC | + |
|
Preference number: 6 (lower is better) Translates to: PLCAGTQPCHPR*WHPGASASCGC Trigger: GCATCCGCAAGAAGCGCTCGCCCCTGGATGCCATCATCGCGGATGGCACGGCTGAGTACCGGCGCACAGTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS CAA 72 bp | CCATCCGCGATGATGGCATCCAGGGGCGAGCGCTTCTaGCGGATGCTGCGGCCAGAGGAGATGAGGTCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: PSAMMASRGERF*RMLRPEEMRSA Trigger: CGCAGACCTCATCTCCTCTGGCCGCAGCATCCGCAAGAAGCGCTCGCCCCTGGATGCCATCATCGCGGATGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS GCA 72 bp | GAGCGCCTGGAAGATACTCCCCTCCGGAACACGCTCTaGCGCCGTTTCCACTGCTCTTCAGCCTTCAATCGC | + |
|
Preference number: 6 (lower is better) Translates to: ERLEDTPLRNTL*RRFHCSSAFNR Trigger: GCGATTGAAGGCTGAAGAGCAGTGGAAACGGCGGCAGAGCGTGTTCCGGAGGGGAGTATCTTCCAGGCGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS CCA 72 bp | TCTGCGTCCGGGCGAGAAAGGCAAAGCCGAAGTTCCTaGCGGCGTTTACCAGGGCGCCTTCATCAGGAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SASGRERQSRSS*RRLPGRLHQEK Trigger: CTTCTCCTGATGAAGGCGCCCTGGTAAACGCCGCCAGGAACTTCGGCTTTGCCTTTCTCGCCCGGACGCAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS TCA 72 bp | GCGAGCGCTTCTTGCGGATGCTGCGGCCAGAGGAGATaGGGTCTGCGTAGCCTCTCTGATGCGAAAAGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: ASASCGCCGQRR*GLRSLSDAKRH Trigger: ATGCCTTTTCGCATCAGAGAGGCTACGCAGACCTCATCTCCTCTGGCCGCAGCATCCGCAAGAAGCGCTCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS GCA 72 bp | ACTCCCCTCCGGAACACGCTCTGCCGCCGTTTCCACTaGTCTTCAGCCTTCAATCGCTTTCGATGCTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: TPLRNTLCRRFH*SSAFNRFRCFW Trigger: CCAGAAGCATCGAAAGCGATTGAAGGCTGAAGAGCAGTGGAAACGGCGGCAGAGCGTGTTCCGGAGGGGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS CAA 90 bp | GCCGTCTCCGGCTCTGGCTCCGCATCCGCCTCTCCTCCTCTGTCCTaGGGAACTTCAGCTTCAGGATCTTACTTCTCTTGGTCTTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: AVSGSGSASASPPLS*GTSASGSYFSWSSS Trigger: AGAAGAAGACCAAGAGAAGTAAGATCCTGAAGCTGAAGTTCCCAAGGACAGAGGAGGAGAGGCGGATGCGGAGCCAGAGCCGGAGACGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025482.10 ENSMUST00000235459.2 |
||
| CDS TCA 72 bp | CGACGACAGGTAGTAAGCACACGGCAACCGTCAGGATaGTGGTCAGCCAGATGTATGGCTGTCTCAGGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: RRQVVSTRQPSG*WSARCMAVSGH Trigger: ATGCCCTGAGACAGCCATACATCTGGCTGACCATCATCCTGACGGTTGCCGTGTGCTTACTACCTGTCGTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS CCA 72 bp | TTTCTGAGGGCCAAATGGTCATGGACAGGAAACGGATaGCGACGACAGGTAGTAAGCACACGGCAACCGTCA | + |
|
Preference number: 6 (lower is better) Translates to: FLRAKWSWTGNG*RRQVVSTRQPS Trigger: TGACGGTTGCCGTGTGCTTACTACCTGTCGTCGCCATCCGTTTCCTGTCCATGACCATTTGGCCCTCAGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS TCA 72 bp | GAAATCCAAAATGGCAAGGACGTTGTAGGTCCTCTCTaGGCCCAGTTCGCTGACGGTGATGGTGTTCTGCGT | + |
|
Preference number: 6 (lower is better) Translates to: EIQNGKDVVGPL*AQFADGDGVLR Trigger: ACGCAGAACACCATCACCGTCAGCGAACTGGGCTCAGAGAGGACCTACAACGTCCTTGCCATTTTGGATTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS CCA 72 bp | GTCAGCACCTTTACAGTACAGCCGGATACTACCTTCTaGGGTCCTCACGATGATAGACATCCGCTTTCGGTC | + |
|
Preference number: 6 (lower is better) Translates to: VSTFTVQPDTTF*GPHDDRHPLSV Trigger: GACCGAAAGCGGATGTCTATCATCGTGAGGACCCCAGAAGGTAGTATCCGGCTGTACTGTAAAGGTGCTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS CAA 72 bp | TTCTCCATCATAGAGGTACCAGGAATAATTGCCAACTaGGGCTTCCCAATAGGCGTGGCCAATGGCGAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: FSIIEVPGIIAN*GFPIGVANGEA Trigger: GGCCTCGCCATTGGCCACGCCTATTGGGAAGCCCAAGTTGGCAATTATTCCTGGTACCTCTATGATGGAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS CAA 90 bp | TGTGGCATTTTCTCCATCATAGAGGTACCAGGAATAATTGCCAACTaGGGCTTCCCAATAGGCGTGGCCAATGGCGAGGCCGGCAGAAAC | + |
|
Preference number: 6 (lower is better) Translates to: CGIFSIIEVPGIIAN*GFPIGVANGEAGRN Trigger: GTTTCTGCCGGCCTCGCCATTGGCCACGCCTATTGGGAAGCCCAAGTTGGCAATTATTCCTGGTACCTCTATGATGGAGAAAATGCCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS CAA 90 bp | GCATTCACAAAAGTCCAGTATGAAGTATCCAAGCCAATCTGGAAGTaGACCGTTATCACTAGAGCGGAGGCCACCGTGACGGCGAAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: AFTKVQYEVSKPIWK*TVITRAEATVTAKD Trigger: GTCCTTCGCCGTCACGGTGGCCTCCGCTCTAGTGATAACGGTCAACTTCCAGATTGGCTTGGATACTTCATACTGGACTTTTGTGAATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS TCA 72 bp | CTCGTACACTTTATCCAACGCTTCGTCTCGGTTGCTTaGGGCCACGCTGGCGGCCATAAACTTATTATTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LVHFIQRFVSVA*GHAGGHKLIIP Trigger: TGGAATAATAAGTTTATGGCCGCCAGCGTGGCCTCAAGCAACCGAGACGAAGCGTTGGATAAAGTGTACGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS TCA 72 bp | CCTGTCCCACTGTTTGCAGATAAGCACCAAGCGGTATaGAGAAGAGGACCATTGAGGTTAAGACCCCATGCA | + |
|
Preference number: 6 (lower is better) Translates to: PVPLFADKHQAV*RRGPLRLRPHA Trigger: TGCATGGGGTCTTAACCTCAATGGTCCTCTTCTTCATACCGCTTGGTGCTTATCTGCAAACAGTGGGACAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS CCA 72 bp | TCTGGATCTTATCACTTTCTGAGGGCCAAATGGTCATaGACAGGAAACGGATGGCGACGACAGGTAGTAAGC | + |
|
Preference number: 6 (lower is better) Translates to: SGSYHFLRAKWS*TGNGWRRQVVS Trigger: GCTTACTACCTGTCGTCGCCATCCGTTTCCTGTCCATGACCATTTGGCCCTCAGAAAGTGATAAGATCCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS CAA 72 bp | ATCTCCTCGTACACTTTATCCAACGCTTCGTCTCGGTaGCTTGAGGCCACGCTGGCGGCCATAAACTTATTA | + |
|
Preference number: 6 (lower is better) Translates to: ISSYTLSNASSR*LEATLAAINLL Trigger: TAATAAGTTTATGGCCGCCAGCGTGGCCTCAAGCAACCGAGACGAAGCGTTGGATAAAGTGTACGAGGAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS CAA 72 bp | AAAGTCCAGTATGAAGTATCCAAGCCAATCTGGAAGTaGACCGTTATCACTAGAGCGGAGGCCACCGTGACG | + |
|
Preference number: 6 (lower is better) Translates to: KVQYEVSKPIWK*TVITRAEATVT Trigger: CGTCACGGTGGCCTCCGCTCTAGTGATAACGGTCAACTTCCAGATTGGCTTGGATACTTCATACTGGACTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS CAA 72 bp | AGTAGCTCCCAAGAGATCCAGGGCATCCTGTGTTTCTaGCTTCGTAGGATTCATCCGATGGAGCCGTTCATA | + |
|
Preference number: 6 (lower is better) Translates to: SSSQEIQGILCF*LRRIHPMEPFI Trigger: TATGAACGGCTCCATCGGATGAATCCTACGAAGCAAGAAACACAGGATGCCCTGGATCTCTTGGGAGCTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235459.2 |
||
| CDS TCA 72 bp | CTCAGCCGTTTCTACATAGCAGAGGCTGTTAGGCTCTaGACTGGACAACAGCAGGATGTCAGCTGGAATAAA | + |
|
Preference number: 6 (lower is better) Translates to: LSRFYIAEAVRL*TGQQQDVSWNK Trigger: TTTATTCCAGCTGACATCCTGCTGTTGTCCAGTTCAGAGCCTAACAGCCTCTGCTATGTAGAAACGGCTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS TCA 72 bp | CAATCGCTTTCGATGCTTCTGGATCTTATCACTTTCTaGGGGCCAAATGGTCATGGACAGGAAACGGATGGC | + |
|
Preference number: 6 (lower is better) Translates to: QSLSMLLDLITF*GPNGHGQETDG Trigger: GCCATCCGTTTCCTGTCCATGACCATTTGGCCCTCAGAAAGTGATAAGATCCAGAAGCATCGAAAGCGATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS CCA 72 bp | CTTCTTCTCAGCTTCTCTGTTGACACGATTCTGTTCTaGTTCAACCGTGGACCCCTGATCTTCAAGTTCGTC | + |
|
Preference number: 6 (lower is better) Translates to: LLLSFSVDTILF*FNRGPLIFKFV Trigger: GACGAACTTGAAGATCAGGGGTCCACGGTTGAACCAGAACAGAATCGTGTCAACAGAGAAGCTGAGAAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025482.10 ENSMUST00000237686.2 |
||
| CDS CCA 72 bp | CAGAGACTCCACCTCTGTTTCTCTGATTCTCCATCCTaGTGTGAAGAAGAGAGTTTATGTCCTCTCCGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: QRLHLCFSDSPS*CEEESLCPLRS Trigger: GCTACGGAGAGGACATAAACTCTCTTCTTCACACCAGGATGGAGAATCAGAGAAACAGAGGTGGAGTCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025482.10 ENSMUST00000235459.2 |
||
| CDS CCA 72 bp | AATGCGGACGGAAAGAGAACGTGTATCCCAGCACTGTaGAAATCAAACATGATGCCGAAGTACAGTGCGATG | + |
|
Preference number: 6 (lower is better) Translates to: NADGKRTCIPAL*KSNMMPKYSAM Trigger: CATCGCACTGTACTTCGGCATCATGTTTGATTTCCACAGTGCTGGGATACACGTTCTCTTTCCGTCCGCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS CAA 90 bp | TCCTCCTCTGTCCTTGGGAACTTCAGCTTCAGGATCTTACTTCTCTaGGTCTTCTTCTCTAGAAGGATTTCATTCAGCCAGGAGCCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: SSSVLGNFSFRILLL*VFFSRRISFSQEPV Trigger: CACTGGCTCCTGGCTGAATGAAATCCTTCTAGAGAAGAAGACCAAGAGAAGTAAGATCCTGAAGCTGAAGTTCCCAAGGACAGAGGAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025482.10 ENSMUST00000235459.2 |
||
| CDS CAA 90 bp | TTCAATAGCAGTAGCTCCCAAGAGATCCAGGGCATCCTGTGTTTCTaGCTTCGTAGGATTCATCCGATGGAGCCGTTCATAAATCACGGT | + |
|
Preference number: 6 (lower is better) Translates to: FNSSSSQEIQGILCF*LRRIHPMEPFINHG Trigger: ACCGTGATTTATGAACGGCTCCATCGGATGAATCCTACGAAGCAAGAAACACAGGATGCCCTGGATCTCTTGGGAGCTACTGCTATTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235459.2 |
||
| CDS CAA 90 bp | TCTTTCTCAATCTCCTCGTACACTTTATCCAACGCTTCGTCTCGGTaGCTTGAGGCCACGCTGGCGGCCATAAACTTATTATTCCATTCT | + |
|
Preference number: 6 (lower is better) Translates to: SFSISSYTLSNASSR*LEATLAAINLLFHS Trigger: AGAATGGAATAATAAGTTTATGGCCGCCAGCGTGGCCTCAAGCAACCGAGACGAAGCGTTGGATAAAGTGTACGAGGAGATTGAGAAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS CAA 90 bp | GCTTTTGCAAGTTTTGAAATGGTTTCTGGGACTCCATCCTGTAGCTaGTCTTCAATAGCAGTAGCTCCCAAGAGATCCAGGGCATCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: AFASFEMVSGTPSCS*SSIAVAPKRSRASC Trigger: ACAGGATGCCCTGGATCTCTTGGGAGCTACTGCTATTGAAGACAAGCTACAGGATGGAGTCCCAGAAACCATTTCAAAACTTGCAAAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235459.2 |
||
| CDS GCA 72 bp | GGTTGTTCGTGGAACTTTCGGTCATTTGCTTTGACTTaGCACGTGCAATCTTTCCGGAATGTCTCTCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: GCSWNFRSFALT*HVQSFRNVSLF Trigger: GAAGAGAGAGACATTCCGGAAAGATTGCACGTGGCAAGTCAAAGCAAATGACCGAAAGTTCCACGAACAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS GCA 72 bp | CGTTTCCACTGCTCTTCAGCCTTCAATCGCTTTCGATaGTTCTGGATCTTATCACTTTCTGAGGGCCAAATG | + |
|
Preference number: 6 (lower is better) Translates to: RFHCSSAFNRFR*FWILSLSEGQM Trigger: CATTTGGCCCTCAGAAAGTGATAAGATCCAGAAGCATCGAAAGCGATTGAAGGCTGAAGAGCAGTGGAAACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS CCA 72 bp | CACTGCTCTTCAGCCTTCAATCGCTTTCGATGCTTCTaGATCTTATCACTTTCTGAGGGCCAAATGGTCATG | + |
|
Preference number: 6 (lower is better) Translates to: HCSSAFNRFRCF*ILSLSEGQMVM Trigger: CATGACCATTTGGCCCTCAGAAAGTGATAAGATCCAGAAGCATCGAAAGCGATTGAAGGCTGAAGAGCAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
||
| CDS CAA 90 bp | CATGAAATGAGGTTGTTCGTGGAACTTTCGGTCATTTGCTTTGACTaGCCACGTGCAATCTTTCCGGAATGTCTCTCTCTTCTTCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: HEMRLFVELSVICFD*PRAIFPECLSLLLS Trigger: GCTGAGAAGAAGAGAGAGACATTCCGGAAAGATTGCACGTGGCAAGTCAAAGCAAATGACCGAAAGTTCCACGAACAACCTCATTTCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS TCA 72 bp | TTGACACGATTCTGTTCTGGTTCAACCGTGGACCCCTaGTCTTCAAGTTCGTCTTCAGTTTCATCATCACTG | + |
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Preference number: 6 (lower is better) Translates to: LTRFCSGSTVDP*SSSSSSVSSSL Trigger: CAGTGATGATGAAACTGAAGACGAACTTGAAGATCAGGGGTCCACGGTTGAACCAGAACAGAATCGTGTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025482.10 ENSMUST00000237686.2 |
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| CDS TCA 72 bp | AATGAGGTTGTTCGTGGAACTTTCGGTCATTTGCTTTaGCTTGCCACGTGCAATCTTTCCGGAATGTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: NEVVRGTFGHLL*LATCNLSGMSL Trigger: GAGAGACATTCCGGAAAGATTGCACGTGGCAAGTCAAAGCAAATGACCGAAAGTTCCACGAACAACCTCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS GCA 72 bp | AGGCAAAGTTCTTGTAAAAGAAGTATCGTAGGAACTTaGACATCCTTATGTAAGACCACCGGCCGTGGACCA | + |
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Preference number: 6 (lower is better) Translates to: RQSSCKRSIVGT*TSLCKTTGRGP Trigger: TGGTCCACGGCCGGTGGTCTTACATAAGGATGTGCAAGTTCCTACGATACTTCTTTTACAAGAACTTTGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS CAA 72 bp | AGGTTGTTCGTGGAACTTTCGGTCATTTGCTTTGACTaGCCACGTGCAATCTTTCCGGAATGTCTCTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: RLFVELSVICFD*PRAIFPECLSL Trigger: AAGAGAGAGACATTCCGGAAAGATTGCACGTGGCAAGTCAAAGCAAATGACCGAAAGTTCCACGAACAACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS CAA 72 bp | ATTTGGAGATATTGGTCCGTGATTTCCAGGGCCATTTaGAACTTCAAATTGGTTTCTCCGTCGAGCTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: IWRYWSVISRAI*NFKLVSPSSSA Trigger: GGCTGAGCTCGACGGAGAAACCAATTTGAAGTTCAAAATGGCCCTGGAAATCACGGACCAATATCTCCAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS CAA 72 bp | AGTTTTGAAATGGTTTCTGGGACTCCATCCTGTAGCTaGTCTTCAATAGCAGTAGCTCCCAAGAGATCCAGG | + |
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Preference number: 6 (lower is better) Translates to: SFEMVSGTPSCS*SSIAVAPKRSR Trigger: CCTGGATCTCTTGGGAGCTACTGCTATTGAAGACAAGCTACAGGATGGAGTCCCAGAAACCATTTCAAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235459.2 |
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| CDS GCA 72 bp | CATGAAATGAGGTTGTTCGTGGAACTTTCGGTCATTTaGTTTGACTTGCCACGTGCAATCTTTCCGGAATGT | + |
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Preference number: 6 (lower is better) Translates to: HEMRLFVELSVI*FDLPRAIFPEC Trigger: ACATTCCGGAAAGATTGCACGTGGCAAGTCAAAGCAAATGACCGAAAGTTCCACGAACAACCTCATTTCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS CAA 90 bp | TTCTTCTTCAGGCGGATGACATCTCCAACCTGGATATCTTTCCACTaGATGATTTTGAACCTGCCATCCTTAATGACTTCACACGTCCTA | + |
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Preference number: 6 (lower is better) Translates to: FFFRRMTSPTWISFH*MILNLPSLMTSHVL Trigger: TAGGACGTGTGAAGTCATTAAGGATGGCAGGTTCAAAATCATCAAGTGGAAAGATATCCAGGTTGGAGATGTCATCCGCCTGAAGAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS CAA 72 bp | AGGCGGATGACATCTCCAACCTGGATATCTTTCCACTaGATGATTTTGAACCTGCCATCCTTAATGACTTCA | + |
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Preference number: 6 (lower is better) Translates to: RRMTSPTWISFH*MILNLPSLMTS Trigger: TGAAGTCATTAAGGATGGCAGGTTCAAAATCATCAAGTGGAAAGATATCCAGGTTGGAGATGTCATCCGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS CAA 72 bp | AGTTTTGAAATGGTTTCTGGGACTCCATCCTGTAGCTaGTCTTCAATAGCAGTAGCTCCCAAGAGAATCAAG | + |
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Preference number: 6 (lower is better) Translates to: SFEMVSGTPSCS*SSIAVAPKRIK Trigger: CTTGATTCTCTTGGGAGCTACTGCTATTGAAGACAAGCTACAGGATGGAGTCCCAGAAACCATTTCAAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS CAA 90 bp | TTATCTTCTATTTGGAGATATTGGTCCGTGATTTCCAGGGCCATTTaGAACTTCAAATTGGTTTCTCCGTCGAGCTCAGCCGTTTCTACA | + |
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Preference number: 6 (lower is better) Translates to: LSSIWRYWSVISRAI*NFKLVSPSSSAVST Trigger: TGTAGAAACGGCTGAGCTCGACGGAGAAACCAATTTGAAGTTCAAAATGGCCCTGGAAATCACGGACCAATATCTCCAAATAGAAGATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS CCA 72 bp | AAATCATTCTTCTTCAGGCGGATGACATCTCCAACCTaGATATCTTTCCACTTGATGATTTTGAACCTGCCA | + |
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Preference number: 6 (lower is better) Translates to: KSFFFRRMTSPT*ISFHLMILNLP Trigger: TGGCAGGTTCAAAATCATCAAGTGGAAAGATATCCAGGTTGGAGATGTCATCCGCCTGAAGAAGAATGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS CAA 72 bp | ACATCTCCAACCTGGATATCTTTCCACTTGATGATTTaGAACCTGCCATCCTTAATGACTTCACACGTCCTA | + |
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Preference number: 6 (lower is better) Translates to: TSPTWISFHLMI*NLPSLMTSHVL Trigger: TAGGACGTGTGAAGTCATTAAGGATGGCAGGTTCAAAATCATCAAGTGGAAAGATATCCAGGTTGGAGATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS CAA 72 bp | AAGCTTTGGTTCTTCCAAAACAGCGTTCCTGTGAACTaGTCTAACCGATTGTTTGGTTCTTCACATTCGATG | + |
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Preference number: 6 (lower is better) Translates to: KLWFFQNSVPVN*SNRLFGSSHSM Trigger: CATCGAATGTGAAGAACCAAACAATCGGTTAGACAAGTTCACAGGAACGCTGTTTTGGAAGAACCAAAGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS CAA 90 bp | TTTGCTCTCCTTAATACAAAAGAACTTGGTGTTCATGAAATGAGGTaGTTCGTGGAACTTTCGGTCATTTGCTTTGACTTGCCACGTGCA | + |
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Preference number: 6 (lower is better) Translates to: FALLNTKELGVHEMR*FVELSVICFDLPRA Trigger: TGCACGTGGCAAGTCAAAGCAAATGACCGAAAGTTCCACGAACAACCTCATTTCATGAACACCAAGTTCTTTTGTATTAAGGAGAGCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS CAA 90 bp | CTTTGGTTCTTCCAAAACAGCGTTCCTGTGAACTTGTCTAACCGATaGTTTGGTTCTTCACATTCGATGAAACCATCAAATGTTGCCAAG | + |
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Preference number: 6 (lower is better) Translates to: LWFFQNSVPVNLSNR*FGSSHSMKPSNVAK Trigger: CTTGGCAACATTTGATGGTTTCATCGAATGTGAAGAACCAAACAATCGGTTAGACAAGTTCACAGGAACGCTGTTTTGGAAGAACCAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS CAA 90 bp | TCCAAAGGAAAGCTTTGGTTCTTCCAAAACAGCGTTCCTGTGAACTaGTCTAACCGATTGTTTGGTTCTTCACATTCGATGAAACCATCA | + |
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Preference number: 6 (lower is better) Translates to: SKGKLWFFQNSVPVN*SNRLFGSSHSMKPS Trigger: TGATGGTTTCATCGAATGTGAAGAACCAAACAATCGGTTAGACAAGTTCACAGGAACGCTGTTTTGGAAGAACCAAAGCTTTCCTTTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS TCA 72 bp | AAGGAAAGCTTTGGTTCTTCCAAAACAGCGTTCCTGTaGACTTGTCTAACCGATTGTTTGGTTCTTCACATT | + |
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Preference number: 6 (lower is better) Translates to: KESFGSSKTAFL*TCLTDCLVLHI Trigger: AATGTGAAGAACCAAACAATCGGTTAGACAAGTTCACAGGAACGCTGTTTTGGAAGAACCAAAGCTTTCCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS CCA 72 bp | ATGAAACCATCAAATGTTGCCAAGTTATCTTCTATTTaGAGATATTGGTCCGTGATTTCCAGGGCCATTTTG | + |
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Preference number: 6 (lower is better) Translates to: MKPSNVAKLSSI*RYWSVISRAIL Trigger: CAAAATGGCCCTGGAAATCACGGACCAATATCTCCAAATAGAAGATAACTTGGCAACATTTGATGGTTTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS CAA 72 bp | GATGAAACCATCAAATGTTGCCAAGTTATCTTCTATTaGGAGATATTGGTCCGTGATTTCCAGGGCCATTTT | + |
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Preference number: 6 (lower is better) Translates to: DETIKCCQVIFY*EILVRDFQGHF Trigger: AAAATGGCCCTGGAAATCACGGACCAATATCTCCAAATAGAAGATAACTTGGCAACATTTGATGGTTTCATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS CAA 72 bp | TTCCAAAACAGCGTTCCTGTGAACTTGTCTAACCGATaGTTTGGTTCTTCACATTCGATGAAACCATCAAAT | + |
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Preference number: 6 (lower is better) Translates to: FQNSVPVNLSNR*FGSSHSMKPSN Trigger: ATTTGATGGTTTCATCGAATGTGAAGAACCAAACAATCGGTTAGACAAGTTCACAGGAACGCTGTTTTGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS CAA 90 bp | GATGAAACCATCAAATGTTGCCAAGTTATCTTCTATTTGGAGATATaGGTCCGTGATTTCCAGGGCCATTTTGAACTTCAAATTGGTTTC | + |
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Preference number: 6 (lower is better) Translates to: DETIKCCQVIFYLEI*VRDFQGHFELQIGF Trigger: GAAACCAATTTGAAGTTCAAAATGGCCCTGGAAATCACGGACCAATATCTCCAAATAGAAGATAACTTGGCAACATTTGATGGTTTCATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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| CDS CAA 90 bp | TTCACATTCGATGAAACCATCAAATGTTGCCAAGTTATCTTCTATTaGGAGATATTGGTCCGTGATTTCCAGGGCCATTTTGAACTTCAA | + |
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Preference number: 6 (lower is better) Translates to: FTFDETIKCCQVIFY*EILVRDFQGHFELQ Trigger: TTGAAGTTCAAAATGGCCCTGGAAATCACGGACCAATATCTCCAAATAGAAGATAACTTGGCAACATTTGATGGTTTCATCGAATGTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025482.10 |
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