RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATP7B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000006567

Ensembl transcript IDs: ENSMUST00000006742.11, ENSMUST00000110738.3

Found 305 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCTGCTAGTCTGTTCCGGGTGGCTCAGCCACTCGCTCAGTTAAGCTaGCCCCATCCCTGCCCTCTGAAGCCACTCCAATCACATAGTCAT +
Preference number: 1 (lower is better)
Translates to: SASLFRVAQPLAQLS*PHPCPLKPLQSHSH
Trigger: ATGACTATGTGATTGGAGTGGCTTCAGAGGGCAGGGATGGGGCCAGCTTAACTGAGCGAGTGGCTGAGCCACCCGGAACAGACTAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
3UTR CCA 90 bp GACCGAGTAGATGACGTCAGTGGGAGGAGGTCGCTGGAGAGGGAGTaGAAGGGTTGCGGATACCAAGAGCGCAATAGATCCCTATACTCC +
Preference number: 1 (lower is better)
Translates to: DRVDDVSGRRSLERE*KGCGYQERNRSLYS
Trigger: GGAGTATAGGGATCTATTGCGCTCTTGGTATCCGCAACCCTTCCACTCCCTCTCCAGCGACCTCCTCCCACTGACGTCATCTACTCGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
3UTR GCA 90 bp GATGACGTCAGTGGGAGGAGGTCGCTGGAGAGGGAGTGGAAGGGTTaGGGATACCAAGAGCGCAATAGATCCCTATACTCCCGGGTTTTA +
Preference number: 1 (lower is better)
Translates to: DDVSGRRSLEREWKG*GYQERNRSLYSRVL
Trigger: TAAAACCCGGGAGTATAGGGATCTATTGCGCTCTTGGTATCCGCAACCCTTCCACTCCCTCTCCAGCGACCTCCTCCCACTGACGTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
3UTR GCA 90 bp AGCCTCTGCAGATACACCACACACTGTAAGGCAAGGCTAGCAGGATaGTCAGGTCTCACCATGAGCTTCGTCCATCCCACAGTGGCTTGT +
Preference number: 1 (lower is better)
Translates to: SLCRYTTHCKARLAG*SGLTMSFVHPTVAC
Trigger: ACAAGCCACTGTGGGATGGACGAAGCTCATGGTGAGACCTGAGCATCCTGCTAGCCTTGCCTTACAGTGTGTGGTGTATCTGCAGAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
3UTR GCA 90 bp TTCCCCAACCTAGTGGCTTCTGGAAGAGCAATCCTGCCCAGCCTCTaGAGATACACCACACACTGTAAGGCAAGGCTAGCAGGATGCTCA +
Preference number: 1 (lower is better)
Translates to: FPNLVASGRAILPSL*RYTTHCKARLAGCS
Trigger: TGAGCATCCTGCTAGCCTTGCCTTACAGTGTGTGGTGTATCTGCAGAGGCTGGGCAGGATTGCTCTTCCAGAAGCCACTAGGTTGGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
3UTR CCA 90 bp AAAGGCCTTCGGAACCCTCTGAACGGCACATTGGCTGTGAGTTCCTaGGAAGACACCGAGGCCCTCGGACCCTGTTTTCTTGTTTTCAGT +
Preference number: 1 (lower is better)
Translates to: KGLRNPLNGTLAVSS*EDTEALGPCFLVFS
Trigger: ACTGAAAACAAGAAAACAGGGTCCGAGGGCCTCGGTGTCTTCCCAGGAACTCACAGCCAATGTGCCGTTCAGAGGGTTCCGAAGGCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
3UTR CCA 90 bp ATGCATACACCTCCCAGGGAACAGTGCTTTATACACTACAGGTTATaGCATGGCTGTATAGGGTGCCCTGAGAGGCAAGGACCTGGACCC +
Preference number: 1 (lower is better)
Translates to: MHTPPREQCFIHYRL*HGCIGCPERQGPGP
Trigger: GGGTCCAGGTCCTTGCCTCTCAGGGCACCCTATACAGCCATGCCATAACCTGTAGTGTATAAAGCACTGTTCCCTGGGAGGTGTATGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
3UTR GCA 90 bp GACAAACTTCACTGGACCCCACTGAGTGACAGGGGTGTGCCCTTATaGATACACCTCCCAGGGAACAGTGCTTTATACACTACAGGTTAT +
Preference number: 1 (lower is better)
Translates to: DKLHWTPLSDRGVPL*IHLPGNSALYTTGY
Trigger: ATAACCTGTAGTGTATAAAGCACTGTTCCCTGGGAGGTGTATGCATAAGGGCACACCCCTGTCACTCAGTGGGGTCCAGTGAAGTTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
3UTR GCA 90 bp GAACAGTGCTTTATACACTACAGGTTATGGCATGGCTGTATAGGGTaGCCTGAGAGGCAAGGACCTGGACCCCATAGGAAAATGAACTAT +
Preference number: 1 (lower is better)
Translates to: EQCFIHYRLWHGCIG*PERQGPGPHRKMNY
Trigger: ATAGTTCATTTTCCTATGGGGTCCAGGTCCTTGCCTCTCAGGGCACCCTATACAGCCATGCCATAACCTGTAGTGTATAAAGCACTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
3UTR-3UTR TCA 90 bp GGGGGAGGGCGCTGTGGGTGTCCCTCCTTTAGATGTCTCCTCAGCAGCAGACAGCTGGACCCCACTGAGTaGCAGGGGTGTGCCCTTATG +
Preference number: 2 (lower is better)
Translates to: GGGRCGCPSFRCLLSSRQLDPTE*QGCALM
Trigger: CATAAGGGCACACCCCTGTCACTCAGTGGGGTCCAG...CTGTCTGCTGCTGAGGAGACATCTAAAGGAGGGACACCCACAGCGCCCTCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
3UTR-3UTR TCA 90 bp GGGGGAGGGCGCTGTGGGTGTCCCTCCTTTAGATGTCTCCTCAGCAGCAGACAGGCTCAGGTCTCACCATaGGCTTCGTCCATCCCACAG +
Preference number: 2 (lower is better)
Translates to: GGGRCGCPSFRCLLSSRQAQVSP*ASSIPQ
Trigger: CTGTGGGATGGACGAAGCTCATGGTGAGACCTGAGC...CTGTCTGCTGCTGAGGAGACATCTAAAGGAGGGACACCCACAGCGCCCTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
3UTR-3UTR TCA 90 bp GAAGATAGAGGGCAGGCAGTTCCAGTACCAAGGATGCCAGCTACACCAGGCAGACTGGCTCCACCACCATaGGCAGGAGCAGGCTCACCC +
Preference number: 2 (lower is better)
Translates to: EDRGQAVPVPRMPATPGRLAPPP*AGAGSP
Trigger: GGGTGAGCCTGCTCCTGCTCATGGTGGTGGAGCCAG...TCTGCCTGGTGTAGCTGGCATCCTTGGTACTGGAACTGCCTGCCCTCTATCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
3UTR-3UTR GCA 90 bp GGGGGAGGGCGCTGTGGGTGTCCCTCCTTTAGATGTCTCCTCAGCAGCAGACAGGCAAGGCTAGCAGGATaGTCAGGTCTCACCATGAGC +
Preference number: 2 (lower is better)
Translates to: GGGRCGCPSFRCLLSSRQARLAG*SGLTMS
Trigger: GCTCATGGTGAGACCTGAGCATCCTGCTAGCCTTGC...CTGTCTGCTGCTGAGGAGACATCTAAAGGAGGGACACCCACAGCGCCCTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
3UTR CAA 90 bp GCAGCGGAATTACAGAAAGGCCTTCGGAACCCTCTGAACGGCACATaGGCTGTGAGTTCCTGGGAAGACACCGAGGCCCTCGGACCCTGT +
Preference number: 2 (lower is better)
Translates to: AAELQKGLRNPLNGT*AVSSWEDTEALGPC
Trigger: ACAGGGTCCGAGGGCCTCGGTGTCTTCCCAGGAACTCACAGCCAATGTGCCGTTCAGAGGGTTCCGAAGGCCTTTCTGTAATTCCGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
3UTR-3UTR GCA 90 bp GGCCTTCGGAACCCTCTGAACGGCACATTGGCTGTGAGTTCCTGGGAAGACACCCATGGCTGTATAGGGTaGCCTGAGAGGCAAGGACCT +
Preference number: 2 (lower is better)
Translates to: GLRNPLNGTLAVSSWEDTHGCIG*PERQGP
Trigger: AGGTCCTTGCCTCTCAGGGCACCCTATACAGCCATG...GGTGTCTTCCCAGGAACTCACAGCCAATGTGCCGTTCAGAGGGTTCCGAAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
3UTR-3UTR GCA 90 bp GAGTTCCTGGGAAGACACCGAGGCCCTCGGACCCTGTTTTCTTGTTTTCAGTCGGCTCTTGCATTGGGCTaGAAACCAGGGCGCCACCTT +
Preference number: 2 (lower is better)
Translates to: EFLGRHRGPRTLFSCFQSALALG*KPGRHL
Trigger: AAGGTGGCGCCCTGGTTTGCAGCCCAATGCAAGAGC...CGACTGAAAACAAGAAAACAGGGTCCGAGGGCCTCGGTGTCTTCCCAGGAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
3UTR-3UTR TCA 90 bp GACAGGGGTGTGCCCTTATGCATACACCTCCCAGGGAACAGTGCTTTATACACTCTGTATAGGGTGCCCTaGGAGGCAAGGACCTGGACC +
Preference number: 2 (lower is better)
Translates to: DRGVPLCIHLPGNSALYTLYRVP*EARTWT
Trigger: GGTCCAGGTCCTTGCCTCTCAGGGCACCCTATACAG...AGTGTATAAAGCACTGTTCCCTGGGAGGTGTATGCATAAGGGCACACCCCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
3UTR-3UTR GCA 90 bp AGGGCAGGCAGTTCCAGTACCAAGGATGCCAGCTACACCAGGCAGAGAACAGACATCCTGCCCAGCCTCTaGAGATACACCACACACTGT +
Preference number: 2 (lower is better)
Translates to: RAGSSSTKDASYTRQRTDILPSL*RYTTHC
Trigger: ACAGTGTGTGGTGTATCTGCAGAGGCTGGGCAGGAT...GTCTGTTCTCTGCCTGGTGTAGCTGGCATCCTTGGTACTGGAACTGCCTGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
3UTR-3UTR GCA 90 bp GAAGATAGAGGGCAGGCAGTTCCAGTACCAAGGATGCCAGCTACACCAGGCAGACTGGAAGAGCAATCCTaGCCAGCCTCTGCAGATACA +
Preference number: 2 (lower is better)
Translates to: EDRGQAVPVPRMPATPGRLEEQS*PASADT
Trigger: TGTATCTGCAGAGGCTGGGCAGGATTGCTCTTCCAG...TCTGCCTGGTGTAGCTGGCATCCTTGGTACTGGAACTGCCTGCCCTCTATCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
3UTR-3UTR GCA 90 bp GCAAGCACCGCTAAGGTGCAAAACCCAAAGCAGCCATCCCAAGTGATGGGTAGTTTCCAGTACCAAGGATaGCAGCTACACCAGGCAGAG +
Preference number: 2 (lower is better)
Translates to: ASTAKVQNPKQPSQVMGSFQYQG*QLHQAE
Trigger: CTCTGCCTGGTGTAGCTGGCATCCTTGGTACTGGAA...ACTACCCATCACTTGGGATGGCTGCTTTGGGTTTTGCACCTTAGCGGTGCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
3UTR-3UTR TCA 90 bp GACAGGGGTGTGCCCTTATGCATACACCTCCCAGGGAACAGTGCTTTATACACTACTATGGTCAGGCTCTaGGGTATCTCTCCAGCTGGT +
Preference number: 2 (lower is better)
Translates to: DRGVPLCIHLPGNSALYTTMVRL*GISPAG
Trigger: ACCAGCTGGAGAGATACCTCAGAGCCTGACCATAGT...AGTGTATAAAGCACTGTTCCCTGGGAGGTGTATGCATAAGGGCACACCCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
3UTR-3UTR CCA 90 bp GAGTTCCTGGGAAGACACCGAGGCCCTCGGACCCTGTTTTCTTGTTTTCAGTCGACGGTGCTATTTTTGTaGGGAAAAGAGGTGAGAAAC +
Preference number: 2 (lower is better)
Translates to: EFLGRHRGPRTLFSCFQSTVLFL*GKEVRN
Trigger: GTTTCTCACCTCTTTTCCCCACAAAAATAGCACCGT...CGACTGAAAACAAGAAAACAGGGTCCGAGGGCCTCGGTGTCTTCCCAGGAACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
3UTR-3UTR TCA 90 bp GAGTTCCTGGGAAGACACCGAGGCCCTCGGACCCTGTTTTCTTGTTTTCAGTCGTCACATAGTCATAGCTaGCAACAGGAACATTTTCAC +
Preference number: 2 (lower is better)
Translates to: EFLGRHRGPRTLFSCFQSSHSHS*QQEHFH
Trigger: GTGAAAATGTTCCTGTTGTCAGCTATGACTATGTGA...CGACTGAAAACAAGAAAACAGGGTCCGAGGGCCTCGGTGTCTTCCCAGGAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
3UTR-3UTR TCA 90 bp GCAAGCACCGCTAAGGTGCAAAACCCAAAGCAGCCATCCCAAGTGATGGGTAGTGCCATGGCCAATAAGTaGCATCCTATAAAGGAGTTT +
Preference number: 2 (lower is better)
Translates to: ASTAKVQNPKQPSQVMGSAMANK*HPIKEF
Trigger: AAACTCCTTTATAGGATGTCACTTATTGGCCATGGC...ACTACCCATCACTTGGGATGGCTGCTTTGGGTTTTGCACCTTAGCGGTGCTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
3UTR-3UTR CCA 90 bp GCAGTTCCAGTACCAAGGATGCCAGCTACACCAGGCAGAGAACAGACTCGTCTGCATGAAAAGCAGGAATaGTATACTTTCCCCAACCTA +
Preference number: 2 (lower is better)
Translates to: AVPVPRMPATPGREQTRLHEKQE*YTFPNL
Trigger: TAGGTTGGGGAAAGTATACCATTCCTGCTTTTCATG...CAGACGAGTCTGTTCTCTGCCTGGTGTAGCTGGCATCCTTGGTACTGGAACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
3UTR-3UTR CCA 90 bp AGGGCAGGCAGTTCCAGTACCAAGGATGCCAGCTACACCAGGCAGAGAACAGACATATACAAATATAGTTaGCAGGGTTCAGTGAAGAGT +
Preference number: 2 (lower is better)
Translates to: RAGSSSTKDASYTRQRTDIYKYS*QGSVKS
Trigger: ACTCTTCACTGAACCCTGCCAACTATATTTGTATAT...GTCTGTTCTCTGCCTGGTGTAGCTGGCATCCTTGGTACTGGAACTGCCTGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
3UTR CCA 72 bp CTGTTCCGGGTGGCTCAGCCACTCGCTCAGTTAAGCTaGCCCCATCCCTGCCCTCTGAAGCCACTCCAATCA +
Preference number: 3 (lower is better)
Translates to: LFRVAQPLAQLS*PHPCPLKPLQS
Trigger: TGATTGGAGTGGCTTCAGAGGGCAGGGATGGGGCCAGCTTAACTGAGCGAGTGGCTGAGCCACCCGGAACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
3UTR CCA 72 bp CGGAACCCTCTGAACGGCACATTGGCTGTGAGTTCCTaGGAAGACACCGAGGCCCTCGGACCCTGTTTTCTT +
Preference number: 3 (lower is better)
Translates to: RNPLNGTLAVSS*EDTEALGPCFL
Trigger: AAGAAAACAGGGTCCGAGGGCCTCGGTGTCTTCCCAGGAACTCACAGCCAATGTGCCGTTCAGAGGGTTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
3UTR CCA 72 bp GATGACGTCAGTGGGAGGAGGTCGCTGGAGAGGGAGTaGAAGGGTTGCGGATACCAAGAGCGCAATAGATCC +
Preference number: 3 (lower is better)
Translates to: DDVSGRRSLERE*KGCGYQERNRS
Trigger: GGATCTATTGCGCTCTTGGTATCCGCAACCCTTCCACTCCCTCTCCAGCGACCTCCTCCCACTGACGTCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
3UTR TCA 72 bp GGATGCCAGCTACACCAGGCAGAGAACAGACTCGTCTaGAGGAGCCTTAGGCTTACACGGCCCATGTGTGCT +
Preference number: 3 (lower is better)
Translates to: GCQLHQAENRLV*RSLRLTRPMCA
Trigger: AGCACACATGGGCCGTGTAAGCCTAAGGCTCCTTCAGACGAGTCTGTTCTCTGCCTGGTGTAGCTGGCATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
3UTR GCA 72 bp CTGCAAACCAGGGCGCCACCTTTAGGCGGGCAGATATaGAGGAGCCAGAGCATCAGACCCAAGGCACTAATT +
Preference number: 3 (lower is better)
Translates to: LQTRAPPLGGQI*RSQSIRPKALI
Trigger: AATTAGTGCCTTGGGTCTGATGCTCTGGCTCCTGCATATCTGCCCGCCTAAAGGTGGCGCCCTGGTTTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
3UTR GCA 72 bp CTAGTGGCTTCTGGAAGAGCAATCCTGCCCAGCCTCTaGAGATACACCACACACTGTAAGGCAAGGCTAGCA +
Preference number: 3 (lower is better)
Translates to: LVASGRAILPSL*RYTTHCKARLA
Trigger: TGCTAGCCTTGCCTTACAGTGTGTGGTGTATCTGCAGAGGCTGGGCAGGATTGCTCTTCCAGAAGCCACTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
3UTR GCA 72 bp CACTGGACCCCACTGAGTGACAGGGGTGTGCCCTTATaGATACACCTCCCAGGGAACAGTGCTTTATACACT +
Preference number: 3 (lower is better)
Translates to: HWTPLSDRGVPL*IHLPGNSALYT
Trigger: AGTGTATAAAGCACTGTTCCCTGGGAGGTGTATGCATAAGGGCACACCCCTGTCACTCAGTGGGGTCCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
3UTR GCA 72 bp AGATACACCACACACTGTAAGGCAAGGCTAGCAGGATaGTCAGGTCTCACCATGAGCTTCGTCCATCCCACA +
Preference number: 3 (lower is better)
Translates to: RYTTHCKARLAG*SGLTMSFVHPT
Trigger: TGTGGGATGGACGAAGCTCATGGTGAGACCTGAGCATCCTGCTAGCCTTGCCTTACAGTGTGTGGTGTATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
3UTR CCA 72 bp GCAGGAATGGTATACTTTCCCCAACCTAGTGGCTTCTaGAAGAGCAATCCTGCCCAGCCTCTGCAGATACAC +
Preference number: 3 (lower is better)
Translates to: AGMVYFPQPSGF*KSNPAQPLQIH
Trigger: GTGTATCTGCAGAGGCTGGGCAGGATTGCTCTTCCAGAAGCCACTAGGTTGGGGAAAGTATACCATTCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
3UTR CCA 72 bp CCTCCCAGGGAACAGTGCTTTATACACTACAGGTTATaGCATGGCTGTATAGGGTGCCCTGAGAGGCAAGGA +
Preference number: 3 (lower is better)
Translates to: PPREQCFIHYRL*HGCIGCPERQG
Trigger: TCCTTGCCTCTCAGGGCACCCTATACAGCCATGCCATAACCTGTAGTGTATAAAGCACTGTTCCCTGGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
3UTR-3UTR CAA 90 bp GACAGGGGTGTGCCCTTATGCATACACCTCCCAGGGAACAGTGCTTTATACACTTATCTCTCCAGCTGGTaGAGAGCGGCACATGTGAGT +
Preference number: 3 (lower is better)
Translates to: DRGVPLCIHLPGNSALYTYLSSW*RAAHVS
Trigger: ACTCACATGTGCCGCTCTCAACCAGCTGGAGAGATA...AGTGTATAAAGCACTGTTCCCTGGGAGGTGTATGCATAAGGGCACACCCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
3UTR GCA 72 bp TTTATACACTACAGGTTATGGCATGGCTGTATAGGGTaGCCTGAGAGGCAAGGACCTGGACCCCATAGGAAA +
Preference number: 3 (lower is better)
Translates to: FIHYRLWHGCIG*PERQGPGPHRK
Trigger: TTTCCTATGGGGTCCAGGTCCTTGCCTCTCAGGGCACCCTATACAGCCATGCCATAACCTGTAGTGTATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
3UTR GCA 72 bp GGGTGTGCCCTTATGCATACACCTCCCAGGGAACAGTaGTTTATACACTACAGGTTATGGCATGGCTGTATA +
Preference number: 3 (lower is better)
Translates to: GCALMHTPPREQ*FIHYRLWHGCI
Trigger: TATACAGCCATGCCATAACCTGTAGTGTATAAAGCACTGTTCCCTGGGAGGTGTATGCATAAGGGCACACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
3UTR CCA 72 bp GGTCCTCACTGCCTAGATAGTATATACAAATATAGTTaGCAGGGTTCAGTGAAGAGTGATGGTTTCCTCCCA +
Preference number: 3 (lower is better)
Translates to: GPHCLDSIYKYS*QGSVKSDGFLP
Trigger: TGGGAGGAAACCATCACTCTTCACTGAACCCTGCCAACTATATTTGTATATACTATCTAGGCAGTGAGGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR TCA 90 bp GGCTCCACCACCATGAGCAGGAGCAGGCTCACCCAGAAGGAGCGCCATGGCCTGGAAGCTCTGCTTCATTaGTTGCTCCCAGGGCCGGCC +
Preference number: 4 (lower is better)
Translates to: GSTTMSRSRLTQKERHGLEALLH*LLPGPA
Trigger: GGCCGGCCCTGGGAGCAATCAATGAAGCAGAGCTTC...CAGGCCATGGCGCTCCTTCTGGGTGAGCCTGCTCCTGCTCATGGTGGTGGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CCA 90 bp GGCTCCACCACCATGAGCAGGAGCAGGCTCACCCAGAAGGAGCGCCATGGCCTGAGCACGGAGAAGGTCTaGGGACCTGCACCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: GSTTMSRSRLTQKERHGLSTEKV*GPAPSP
Trigger: AGGGGAAGGTGCAGGTCCCCAGACCTTCTCCGTGCT...CAGGCCATGGCGCTCCTTCTGGGTGAGCCTGCTCCTGCTCATGGTGGTGGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR TCA 90 bp GGCTCCACCACCATGAGCAGGAGCAGGCTCACCCAGAAGGAGCGCCATGGCCTGTTGTGGCGAGCACGATaGGTACGTCCATGTTGGCGG +
Preference number: 4 (lower is better)
Translates to: GSTTMSRSRLTQKERHGLLWRAR*VRPCWR
Trigger: CCGCCAACATGGACGTACTCATCGTGCTCGCCACAA...CAGGCCATGGCGCTCCTTCTGGGTGAGCCTGCTCCTGCTCATGGTGGTGGAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR GCA 90 bp GGGGGAGGGCGCTGTGGGTGTCCCTCCTTTAGATGTCTCCTCAGCAGCAGACAGCTCTGCTTCATTGATTaGTCCCAGGGCCGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: GGGRCGCPSFRCLLSSRQLCFID*SQGRPG
Trigger: GCCCGGCCGGCCCTGGGAGCAATCAATGAAGCAGAG...CTGTCTGCTGCTGAGGAGACATCTAAAGGAGGGACACCCACAGCGCCCTCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR GCA 90 bp GGGGGAGGGCGCTGTGGGTGTCCCTCCTTTAGATGTCTCCTCAGCAGCAGACAGCACGGGGCTCTTCTCTaGCTTCTCGGCTACGGCGAC +
Preference number: 4 (lower is better)
Translates to: GGGRCGCPSFRCLLSSRQHGALL*LLGYGD
Trigger: GTCGCCGTAGCCGAGAAGGCAGAGAAGAGCCCCGTG...CTGTCTGCTGCTGAGGAGACATCTAAAGGAGGGACACCCACAGCGCCCTCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CCA 90 bp GGCTCCACCACCATGAGCAGGAGCAGGCTCACCCAGAAGGAGCGCCATGGCCTGCTGCACCTTCCCCTGTaGGAGGGTTGCCAACTCCAA +
Preference number: 4 (lower is better)
Translates to: GSTTMSRSRLTQKERHGLLHLPL*EGCQLQ
Trigger: TTGGAGTTGGCAACCCTCCCACAGGGGAAGGTGCAG...CAGGCCATGGCGCTCCTTCTGGGTGAGCCTGCTCCTGCTCATGGTGGTGGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR TCA 90 bp AGGGCAGGCAGTTCCAGTACCAAGGATGCCAGCTACACCAGGCAGAGAACAGACCCTCTACCCGGAGCTTaGCCACCGCCTCCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: RAGSSSTKDASYTRQRTDPLPGA*PPPPGL
Trigger: CAGCCCAGGAGGCGGTGGTCAAGCTCCGGGTAGAGG...GTCTGTTCTCTGCCTGGTGTAGCTGGCATCCTTGGTACTGGAACTGCCTGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR GCA 90 bp GGCTCCACCACCATGAGCAGGAGCAGGCTCACCCAGAAGGAGCGCCATGGCCTGACTTCACATGGGCTTTaGTGGTGGCAAGGGCCACAG +
Preference number: 4 (lower is better)
Translates to: GSTTMSRSRLTQKERHGLTSHGL*WWQGPQ
Trigger: CTGTGGCCCTTGCCACCAGCAAAGCCCATGTGAAGT...CAGGCCATGGCGCTCCTTCTGGGTGAGCCTGCTCCTGCTCATGGTGGTGGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR GCA 90 bp GGGGGAGGGCGCTGTGGGTGTCCCTCCTTTAGATGTCTCCTCAGCAGCAGACAGCCCCTGTGGGAGGGTTaGCAACTCCAACAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: GGGRCGCPSFRCLLSSRQPLWEG*QLQQGE
Trigger: CTCACCCTGTTGGAGTTGGCAACCCTCCCACAGGGG...CTGTCTGCTGCTGAGGAGACATCTAAAGGAGGGACACCCACAGCGCCCTCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CCA 90 bp GGCTCCACCACCATGAGCAGGAGCAGGCTCACCCAGAAGGAGCGCCATGGCCTGCCTGGGATGATGTTGTaGTCCAGGACCATCGTCTCC +
Preference number: 4 (lower is better)
Translates to: GSTTMSRSRLTQKERHGLPGMML*SRTIVS
Trigger: GGAGACGATGGTCCTGGACCACAACATCATCCCAGG...CAGGCCATGGCGCTCCTTCTGGGTGAGCCTGCTCCTGCTCATGGTGGTGGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CCA 90 bp GGCTCCACCACCATGAGCAGGAGCAGGCTCACCCAGAAGGAGCGCCATGGCCTGAGAGCACACCATCAATaGCCACCAGGATGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: GSTTMSRSRLTQKERHGLRAHHQ*PPGWPS
Trigger: AGACGGCCATCCTGGTGGCCATTGATGGTGTGCTCT...CAGGCCATGGCGCTCCTTCTGGGTGAGCCTGCTCCTGCTCATGGTGGTGGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CCA 90 bp GGCTCCACCACCATGAGCAGGAGCAGGCTCACCCAGAAGGAGCGCCATGGCCTGCGTCTGCTGCTTCGATaGCAACATCTGTGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: GSTTMSRSRLTQKERHGLRLLLR*QHLCQS
Trigger: GGACTGGCACAGATGTTGCCATCGAAGCAGCAGACG...CAGGCCATGGCGCTCCTTCTGGGTGAGCCTGCTCCTGCTCATGGTGGTGGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR TCA 90 bp GGGGGAGGGCGCTGTGGGTGTCCCTCCTTTAGATGTCTCCTCAGCAGCAGACAGGTCCTCTTGGAGAGATaGATGCTGGCCACGACGTCC +
Preference number: 4 (lower is better)
Translates to: GGGRCGCPSFRCLLSSRQVLLER*MLATTS
Trigger: GGACGTCGTGGCCAGCATTCATCTCTCCAAGAGGAC...CTGTCTGCTGCTGAGGAGACATCTAAAGGAGGGACACCCACAGCGCCCTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR GCA 90 bp AAGGCTAGCAGGATGCTCAGGTCTCACCATGAGCTTCGTCCATCCCACAGTGGCGGCGGCCTTTCCCTCTaGAGCGCTGGCCTCAAAGCC +
Preference number: 4 (lower is better)
Translates to: KASRMLRSHHELRPSHSGGGLSL*SAGLKA
Trigger: GGCTTTGAGGCCAGCGCTGCAGAGGGAAAGGCCGCC...GCCACTGTGGGATGGACGAAGCTCATGGTGAGACCTGAGCATCCTGCTAGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR GCA 90 bp GAAGATAGAGGGCAGGCAGTTCCAGTACCAAGGATGCCAGCTACACCAGGCAGATGCTGGCCTCCGCGGTaGCCACCACGGCCAGAACCT +
Preference number: 4 (lower is better)
Translates to: EDRGQAVPVPRMPATPGRCWPPR*PPRPEP
Trigger: AGGTTCTGGCCGTGGTGGGCACCGCGGAGGCCAGCA...TCTGCCTGGTGTAGCTGGCATCCTTGGTACTGGAACTGCCTGCCCTCTATCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR GCA 90 bp GGCTCCACCACCATGAGCAGGAGCAGGCTCACCCAGAAGGAGCGCCATGGCCTGTGGTTTGACAGCATCTaGGATGGCGATCATCCCGCA +
Preference number: 4 (lower is better)
Translates to: GSTTMSRSRLTQKERHGLWFDSI*DGDHPA
Trigger: TGCGGGATGATCGCCATCGCAGATGCTGTCAAACCA...CAGGCCATGGCGCTCCTTCTGGGTGAGCCTGCTCCTGCTCATGGTGGTGGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR GCA 90 bp ACTTTCCCCAACCTAGTGGCTTCTGGAAGAGCAATCCTGCCCAGCCTCTGCAGACACTCAGGGGCTTCATaGGGCCGTGGGCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: TFPNLVASGRAILPSLCRHSGAS*GRGPGP
Trigger: AGGCCCAGGCCCACGGCCGCATGAAGCCCCTGAGTG...TCTGCAGAGGCTGGGCAGGATTGCTCTTCCAGAAGCCACTAGGTTGGGGAAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CCA 90 bp GAGTTCCTGGGAAGACACCGAGGCCCTCGGACCCTGTTTTCTTGTTTTCAGTCGCACCGCCTCCTGGGCTaGGGAGGACCTGGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: EFLGRHRGPRTLFSCFQSHRLLG*GGPGRP
Trigger: TGGCCTTCCAGGTCCTCCCCAGCCCAGGAGGCGGTG...CGACTGAAAACAAGAAAACAGGGTCCGAGGGCCTCGGTGTCTTCCCAGGAACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CCA 90 bp GGGGGAGGGCGCTGTGGGTGTCCCTCCTTTAGATGTCTCCTCAGCAGCAGACAGCCAGGGTCACGACTGTaGCTTCTGTGGCTTGGAGTG +
Preference number: 4 (lower is better)
Translates to: GGGRCGCPSFRCLLSSRQPGSRL*LLWLGV
Trigger: CACTCCAAGCCACAGAAGCCACAGTCGTGACCCTGG...CTGTCTGCTGCTGAGGAGACATCTAAAGGAGGGACACCCACAGCGCCCTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CCA 90 bp TTGCATTGGGCTGCAAACCAGGGCGCCACCTTTAGGCGGGCAGATATGCAGGAGCAGAGGACGCAGCCATaGCTGCTGAGCCCATCCACG +
Preference number: 4 (lower is better)
Translates to: LHWAANQGATFRRADMQEQRTQP*LLSPST
Trigger: CGTGGATGGGCTCAGCAGCCATGGCTGCGTCCTCTG...CTCCTGCATATCTGCCCGCCTAAAGGTGGCGCCCTGGTTTGCAGCCCAATGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR TCA 90 bp AGGGCAGGCAGTTCCAGTACCAAGGATGCCAGCTACACCAGGCAGAGAACAGACAGCCCAGGTCCTGGATaGGCTGAGCTATCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: RAGSSSTKDASYTRQRTDSPGPG*AELSWA
Trigger: CGCCCAGGATAGCTCAGCTCATCCAGGACCTGGGCT...GTCTGTTCTCTGCCTGGTGTAGCTGGCATCCTTGGTACTGGAACTGCCTGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR TCA 90 bp GGCTCCACCACCATGAGCAGGAGCAGGCTCACCCAGAAGGAGCGCCATGGCCTGTTGTTGATGCCAACCTaGGTAGCAATGGCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: GSTTMSRSRLTQKERHGLLLMPT*VAMALA
Trigger: AGCCAGAGCCATTGCTACTCAGGTTGGCATCAACAA...CAGGCCATGGCGCTCCTTCTGGGTGAGCCTGCTCCTGCTCATGGTGGTGGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR GCA 90 bp AGGGCAGGCAGTTCCAGTACCAAGGATGCCAGCTACACCAGGCAGAGAACAGACAGTGCCCACCATGACTaGTGTGGGTGTGGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: RAGSSSTKDASYTRQRTDSAHHD*CGCGQP
Trigger: GGGCTGGCCACACCCACAGCAGTCATGGTGGGCACT...GTCTGTTCTCTGCCTGGTGTAGCTGGCATCCTTGGTACTGGAACTGCCTGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CCA 90 bp AGGGCAGGCAGTTCCAGTACCAAGGATGCCAGCTACACCAGGCAGAGAACAGACTTGACCACCGCCTCCTaGGCTGGGGAGGACCTGGAA +
Preference number: 4 (lower is better)
Translates to: RAGSSSTKDASYTRQRTDLTTAS*AGEDLE
Trigger: TTCCAGGTCCTCCCCAGCCCAGGAGGCGGTGGTCAA...GTCTGTTCTCTGCCTGGTGTAGCTGGCATCCTTGGTACTGGAACTGCCTGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CCA 90 bp GCAAGCACCGCTAAGGTGCAAAACCCAAAGCAGCCATCCCAAGTGATGGGTAGTCCCGGGCCCTGCTCCTaGTGTCTCTGGGAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: ASTAKVQNPKQPSQVMGSPGPCS*CLWEEP
Trigger: TGGCTCCTCCCAGAGACACCAGGAGCAGGGCCCGGG...ACTACCCATCACTTGGGATGGCTGCTTTGGGTTTTGCACCTTAGCGGTGCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CCA 90 bp GGGGGAGGGCGCTGTGGGTGTCCCTCCTTTAGATGTCTCCTCAGCAGCAGACAGAGCCAGGGCAGCCTCTaGTTTGACAGCATCTGCGAT +
Preference number: 4 (lower is better)
Translates to: GGGRCGCPSFRCLLSSRQSQGSL*FDSICD
Trigger: ATCGCAGATGCTGTCAAACCAGAGGCTGCCCTGGCT...CTGTCTGCTGCTGAGGAGACATCTAAAGGAGGGACACCCACAGCGCCCTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CCA 90 bp GAGTTCCTGGGAAGACACCGAGGCCCTCGGACCCTGTTTTCTTGTTTTCAGTCGATGCCCACGTCAGCCTaGGCCAGGGCTGGGGAGTCA +
Preference number: 4 (lower is better)
Translates to: EFLGRHRGPRTLFSCFQSMPTSA*ARAGES
Trigger: TGACTCCCCAGCCCTGGCCCAGGCTGACGTGGGCAT...CGACTGAAAACAAGAAAACAGGGTCCGAGGGCCTCGGTGTCTTCCCAGGAACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR TCA 90 bp GGCTCCACCACCATGAGCAGGAGCAGGCTCACCCAGAAGGAGCGCCATGGCCTGGTTCCAGGGACACCTTaGTGTTCACAATGCCTTTCA +
Preference number: 4 (lower is better)
Translates to: GSTTMSRSRLTQKERHGLVPGTP*CSQCLS
Trigger: TGAAAGGCATTGTGAACATCAAGGTGTCCCTGGAAC...CAGGCCATGGCGCTCCTTCTGGGTGAGCCTGCTCCTGCTCATGGTGGTGGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR TCA 90 bp GGCTCCACCACCATGAGCAGGAGCAGGCTCACCCAGAAGGAGCGCCATGGCCTGGAGCTGTTCTGTTCTTaGTGGCAGCTTCAAATCCCA +
Preference number: 4 (lower is better)
Translates to: GSTTMSRSRLTQKERHGLELFCS*WQLQIP
Trigger: TGGGATTTGAAGCTGCCATCAAGAACAGAACAGCTC...CAGGCCATGGCGCTCCTTCTGGGTGAGCCTGCTCCTGCTCATGGTGGTGGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR TCA 90 bp GGCTCCACCACCATGAGCAGGAGCAGGCTCACCCAGAAGGAGCGCCATGGCCTGCCCAGGGTCTCAAAATaGTTGGAAATCTGGACAGGA +
Preference number: 4 (lower is better)
Translates to: GSTTMSRSRLTQKERHGLPRVSK*LEIWTG
Trigger: TCCTGTCCAGATTTCCAATCATTTTGAGACCCTGGG...CAGGCCATGGCGCTCCTTCTGGGTGAGCCTGCTCCTGCTCATGGTGGTGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR GCA 90 bp CCCAGGGAACAGTGCTTTATACACTACAGGTTATGGCATGGCTGTATAGGGTGCGCCACGCCTAAGGGGTaGTCGCTGCTGGCCTCCGCG +
Preference number: 4 (lower is better)
Translates to: PREQCFIHYRLWHGCIGCATPKG*SLLASA
Trigger: CGCGGAGGCCAGCAGCGAGCACCCCTTAGGCGTGGC...GCACCCTATACAGCCATGCCATAACCTGTAGTGTATAAAGCACTGTTCCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR GCA 90 bp GCAGTTCCAGTACCAAGGATGCCAGCTACACCAGGCAGAGAACAGACTCGTCTGGAGCCCATCCACGGCTaGAGCACGATGCCAATGGGC +
Preference number: 4 (lower is better)
Translates to: AVPVPRMPATPGREQTRLEPIHG*STMPMG
Trigger: GCCCATTGGCATCGTGCTGCAGCCGTGGATGGGCTC...CAGACGAGTCTGTTCTCTGCCTGGTGTAGCTGGCATCCTTGGTACTGGAACTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CCA 90 bp GAAGATAGAGGGCAGGCAGTTCCAGTACCAAGGATGCCAGCTACACCAGGCAGACTGCTGGGGACGAGCTaGTGCTGTCCAGACCCCCTT +
Preference number: 4 (lower is better)
Translates to: EDRGQAVPVPRMPATPGRLLGTS*CCPDPL
Trigger: AAGGGGGTCTGGACAGCACCAGCTCGTCCCCAGCAG...TCTGCCTGGTGTAGCTGGCATCCTTGGTACTGGAACTGCCTGCCCTCTATCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CCA 90 bp AAGGCTAGCAGGATGCTCAGGTCTCACCATGAGCTTCGTCCATCCCACAGTGGCTGCTCCTGGTGTCTCTaGGAGGAGCCACTTTGGGGC +
Preference number: 4 (lower is better)
Translates to: KASRMLRSHHELRPSHSGCSWCL*EEPLWG
Trigger: GCCCCAAAGTGGCTCCTCCCAGAGACACCAGGAGCA...GCCACTGTGGGATGGACGAAGCTCATGGTGAGACCTGAGCATCCTGCTAGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CCA 90 bp GCAGTTCCAGTACCAAGGATGCCAGCTACACCAGGCAGAGAACAGACTCGTCTGAGCCTGGGCCAGGGCTaGGGAGTCATTCACCCCATC +
Preference number: 4 (lower is better)
Translates to: AVPVPRMPATPGREQTRLSLGQG*GVIHPI
Trigger: GATGGGGTGAATGACTCCCCAGCCCTGGCCCAGGCT...CAGACGAGTCTGTTCTCTGCCTGGTGTAGCTGGCATCCTTGGTACTGGAACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR TCA 90 bp GGGGGAGGGCGCTGTGGGTGTCCCTCCTTTAGATGTCTCCTCAGCAGCAGACAGTGGGCCAGGGAAGCATaGAAGCCAATTTCCTCAATG +
Preference number: 4 (lower is better)
Translates to: GGGRCGCPSFRCLLSSRQWAREA*KPISSM
Trigger: CATTGAGGAAATTGGCTTTCATGCTTCCCTGGCCCA...CTGTCTGCTGCTGAGGAGACATCTAAAGGAGGGACACCCACAGCGCCCTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR TCA 90 bp AGGGCAGGCAGTTCCAGTACCAAGGATGCCAGCTACACCAGGCAGAGAACAGACCGGACAGTCCTGGGATaGTGTTGTGGTCCAGGACCA +
Preference number: 4 (lower is better)
Translates to: RAGSSSTKDASYTRQRTDRTVLG*CCGPGP
Trigger: TGGTCCTGGACCACAACATCATCCCAGGACTGTCCG...GTCTGTTCTCTGCCTGGTGTAGCTGGCATCCTTGGTACTGGAACTGCCTGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR TCA 90 bp ACTTTCCCCAACCTAGTGGCTTCTGGAAGAGCAATCCTGCCCAGCCTCTGCAGAACCGTCCCAGGGCGATaGACACAAAGAGCATGGGGG +
Preference number: 4 (lower is better)
Translates to: TFPNLVASGRAILPSLCRTVPGR*TQRAWG
Trigger: CCCCCATGCTCTTTGTGTTCATCGCCCTGGGACGGT...TCTGCAGAGGCTGGGCAGGATTGCTCTTCCAGAAGCCACTAGGTTGGGGAAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR TCA 90 bp GGCTCCACCACCATGAGCAGGAGCAGGCTCACCCAGAAGGAGCGCCATGGCCTGCTAGGAAAGTACTTCTaGACCACACCGAAATCGACA +
Preference number: 4 (lower is better)
Translates to: GSTTMSRSRLTQKERHGLLGKYF*TTPKST
Trigger: TGTCGATTTCGGTGTGGTTCAGAAGTACTTTCCTAG...CAGGCCATGGCGCTCCTTCTGGGTGAGCCTGCTCCTGCTCATGGTGGTGGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR TCA 90 bp ACGGCCCATGTGTGCTGCCTAACTCCAGGTGTTATGGGAGCTCTTAGTATAGGACCCCAGTGCCCACCATaGCTGCTGTGGGTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: TAHVCCLTPGVMGALSIGPQCPP*LLWVWP
Trigger: TGGCCACACCCACAGCAGTCATGGTGGGCACTGGGG...TCCTATACTAAGAGCTCCCATAACACCTGGAGTTAGGCAGCACACATGGGCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR TCA 90 bp AGGGCAGGCAGTTCCAGTACCAAGGATGCCAGCTACACCAGGCAGAGAACAGACTCCGGTTGTCCCCTGTaGTCAGAGCCACATCCACAC +
Preference number: 4 (lower is better)
Translates to: RAGSSSTKDASYTRQRTDSGCPL*SEPHPH
Trigger: GTGTGGATGTGGCTCTGATCACAGGGGACAACCGGA...GTCTGTTCTCTGCCTGGTGTAGCTGGCATCCTTGGTACTGGAACTGCCTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR TCA 90 bp AAGGCTAGCAGGATGCTCAGGTCTCACCATGAGCTTCGTCCATCCCACAGTGGCACCTTGGCCACCTTGTaGGAAGGCAGTACCTCCGCA +
Preference number: 4 (lower is better)
Translates to: KASRMLRSHHELRPSHSGTLATL*EGSTSA
Trigger: TGCGGAGGTACTGCCTTCTCACAAGGTGGCCAAGGT...GCCACTGTGGGATGGACGAAGCTCATGGTGAGACCTGAGCATCCTGCTAGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CCA 90 bp GGCCTTCGGAACCCTCTGAACGGCACATTGGCTGTGAGTTCCTGGGAAGACACCCCCATGTCACAGATGTaGTCCCTGAGGTCTTCGGGT +
Preference number: 4 (lower is better)
Translates to: GLRNPLNGTLAVSSWEDTPMSQM*SLRSSG
Trigger: ACCCGAAGACCTCAGGGACCACATCTGTGACATGGG...GGTGTCTTCCCAGGAACTCACAGCCAATGTGCCGTTCAGAGGGTTCCGAAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CCA 90 bp GGCTCCACCACCATGAGCAGGAGCAGGCTCACCCAGAAGGAGCGCCATGGCCTGCTGCTATATCACCCATaGTTTGTGGCACAGAATTCC +
Preference number: 4 (lower is better)
Translates to: GSTTMSRSRLTQKERHGLLLYHP*FVAQNS
Trigger: GGAATTCTGTGCCACAAACCATGGGTGATATAGCAG...CAGGCCATGGCGCTCCTTCTGGGTGAGCCTGCTCCTGCTCATGGTGGTGGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CCA 90 bp GGGGGAGGGCGCTGTGGGTGTCCCTCCTTTAGATGTCTCCTCAGCAGCAGACAGGGGACTCATCAGCCATaGTATTGCCTTCGAGGACTT +
Preference number: 4 (lower is better)
Translates to: GGGRCGCPSFRCLLSSRQGTHQP*YCLRGL
Trigger: AAGTCCTCGAAGGCAATACCATGGCTGATGAGTCCC...CTGTCTGCTGCTGAGGAGACATCTAAAGGAGGGACACCCACAGCGCCCTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CCA 90 bp GAAGATAGAGGGCAGGCAGTTCCAGTACCAAGGATGCCAGCTACACCAGGCAGACAGCCGGGCACTGCCTaGAAGTCTGTGCTGTATCCC +
Preference number: 4 (lower is better)
Translates to: EDRGQAVPVPRMPATPGRQPGTA*KSVLYP
Trigger: GGGATACAGCACAGACTTCCAGGCAGTGCCCGGCTG...TCTGCCTGGTGTAGCTGGCATCCTTGGTACTGGAACTGCCTGCCCTCTATCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR TCA 90 bp GAAGATAGAGGGCAGGCAGTTCCAGTACCAAGGATGCCAGCTACACCAGGCAGAGAGCTGACACAGGACTaGCAGGTCATGCCCTCTACC +
Preference number: 4 (lower is better)
Translates to: EDRGQAVPVPRMPATPGRELTQD*QVMPST
Trigger: GGTAGAGGGCATGACCTGTCAGTCCTGTGTCAGCTC...TCTGCCTGGTGTAGCTGGCATCCTTGGTACTGGAACTGCCTGCCCTCTATCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR GCA 90 bp ACTTTCCCCAACCTAGTGGCTTCTGGAAGAGCAATCCTGCCCAGCCTCTGCAGAGCCTCGATGGCTGTCTaGAGGAACATGGGGGTGACA +
Preference number: 4 (lower is better)
Translates to: TFPNLVASGRAILPSLCRASMAV*RNMGVT
Trigger: TGTCACCCCCATGTTCCTGCAGACAGCCATCGAGGC...TCTGCAGAGGCTGGGCAGGATTGCTCTTCCAGAAGCCACTAGGTTGGGGAAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR GCA 90 bp GGCTCCACCACCATGAGCAGGAGCAGGCTCACCCAGAAGGAGCGCCATGGCCTGTTTTTGCACAGACCCTaGTATATCACCCATGGTTTG +
Preference number: 4 (lower is better)
Translates to: GSTTMSRSRLTQKERHGLFLHRP*YITHGL
Trigger: CAAACCATGGGTGATATAGCAGGGTCTGTGCAAAAA...CAGGCCATGGCGCTCCTTCTGGGTGAGCCTGCTCCTGCTCATGGTGGTGGAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR GCA 90 bp GAAGATAGAGGGCAGGCAGTTCCAGTACCAAGGATGCCAGCTACACCAGGCAGACTGCCTGGAAGTCTGTaGTGTATCCCAGGGTCTCCG +
Preference number: 4 (lower is better)
Translates to: EDRGQAVPVPRMPATPGRLPGSL*CIPGSP
Trigger: CGGAGACCCTGGGATACAGCACAGACTTCCAGGCAG...TCTGCCTGGTGTAGCTGGCATCCTTGGTACTGGAACTGCCTGCCCTCTATCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CCA 90 bp AGGGCAGGCAGTTCCAGTACCAAGGATGCCAGCTACACCAGGCAGAGAACAGACTTCCCTCTGCAGCGCTaGCCTCAAAGCCCATATCCT +
Preference number: 4 (lower is better)
Translates to: RAGSSSTKDASYTRQRTDFPLQR*PQSPYP
Trigger: AGGATATGGGCTTTGAGGCCAGCGCTGCAGAGGGAA...GTCTGTTCTCTGCCTGGTGTAGCTGGCATCCTTGGTACTGGAACTGCCTGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CCA 90 bp ACTTTCCCCAACCTAGTGGCTTCTGGAAGAGCAATCCTGCCCAGCCTCTGCAGATCACATGGGCTTTGCTaGTGGCAAGGGCCACAGAGG +
Preference number: 4 (lower is better)
Translates to: TFPNLVASGRAILPSLCRSHGLC*WQGPQR
Trigger: CCTCTGTGGCCCTTGCCACCAGCAAAGCCCATGTGA...TCTGCAGAGGCTGGGCAGGATTGCTCTTCCAGAAGCCACTAGGTTGGGGAAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CCA 90 bp GGGGGAGGGCGCTGTGGGTGTCCCTCCTTTAGATGTCTCCTCAGCAGCAGACAGGTGGCTTCTGTGGCTTaGAGTGACATGAGTTTTGCA +
Preference number: 4 (lower is better)
Translates to: GGGRCGCPSFRCLLSSRQVASVA*SDMSFA
Trigger: TGCAAAACTCATGTCACTCCAAGCCACAGAAGCCAC...CTGTCTGCTGCTGAGGAGACATCTAAAGGAGGGACACCCACAGCGCCCTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CCA 90 bp GGCCTTCGGAACCCTCTGAACGGCACATTGGCTGTGAGTTCCTGGGAAGACACCCAATGGCCACCAGGATaGCCGTCTGTCCTTTCATCT +
Preference number: 4 (lower is better)
Translates to: GLRNPLNGTLAVSSWEDTQWPPG*PSVLSS
Trigger: AGATGAAAGGACAGACGGCCATCCTGGTGGCCATTG...GGTGTCTTCCCAGGAACTCACAGCCAATGTGCCGTTCAGAGGGTTCCGAAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CCA 90 bp ACTTTCCCCAACCTAGTGGCTTCTGGAAGAGCAATCCTGCCCAGCCTCTGCAGAATGTGCACGCTGACTTaGGAGGCACTCAGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: TFPNLVASGRAILPSLCRMCTLT*EALRGF
Trigger: GAAGCCCCTGAGTGCCTCCCAAGTCAGCGTGCACAT...TCTGCAGAGGCTGGGCAGGATTGCTCTTCCAGAAGCCACTAGGTTGGGGAAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
3UTR CAA 72 bp TTACAGAAAGGCCTTCGGAACCCTCTGAACGGCACATaGGCTGTGAGTTCCTGGGAAGACACCGAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: LQKGLRNPLNGT*AVSSWEDTEAL
Trigger: GAGGGCCTCGGTGTCTTCCCAGGAACTCACAGCCAATGTGCCGTTCAGAGGGTTCCGAAGGCCTTTCTGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR TCA 90 bp ACTTTCCCCAACCTAGTGGCTTCTGGAAGAGCAATCCTGCCCAGCCTCTGCAGAGTCTTGTGGTCCAAGTaGTGGGCGTTGGGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: TFPNLVASGRAILPSLCRVLWSK*WALGFL
Trigger: GAGAAACCCCAACGCCCATCACTTGGACCACAAGAC...TCTGCAGAGGCTGGGCAGGATTGCTCTTCCAGAAGCCACTAGGTTGGGGAAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR GCA 90 bp CCCAGGGAACAGTGCTTTATACACTACAGGTTATGGCATGGCTGTATAGGGTGCATGACGTCGCCTCGCTaGACCAGCTCCATGGGCACC +
Preference number: 4 (lower is better)
Translates to: PREQCFIHYRLWHGCIGCMTSPR*TSSMGT
Trigger: GGTGCCCATGGAGCTGGTGCAGCGAGGCGACGTCAT...GCACCCTATACAGCCATGCCATAACCTGTAGTGTATAAAGCACTGTTCCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR GCA 90 bp GGCCTTCGGAACCCTCTGAACGGCACATTGGCTGTGAGTTCCTGGGAAGACACCATGATCACCTCTGTCTaGGAGATGTGCTTGCTAGGG +
Preference number: 4 (lower is better)
Translates to: GLRNPLNGTLAVSSWEDTMITSV*EMCLLG
Trigger: CCCTAGCAAGCACATCTCGCAGACAGAGGTGATCAT...GGTGTCTTCCCAGGAACTCACAGCCAATGTGCCGTTCAGAGGGTTCCGAAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR GCA 90 bp TTGCATTGGGCTGCAAACCAGGGCGCCACCTTTAGGCGGGCAGATATGCAGGAGGGTCTTTATCTTGTGTaGCATCTCCAGAGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: LHWAANQGATFRRADMQEGLYLV*HLQRLP
Trigger: GGGAAGCCTCTGGAGATGGCACACAAGATAAAGACC...CTCCTGCATATCTGCCCGCCTAAAGGTGGCGCCCTGGTTTGCAGCCCAATGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CCA 90 bp GACAGGGGTGTGCCCTTATGCATACACCTCCCAGGGAACAGTGCTTTATACACTCCAAGTGATGGGCGTTaGGGTTTCTCTGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: DRGVPLCIHLPGNSALYTPSDGR*GFSGPG
Trigger: CCCTGGCCCAGAGAAACCCCAACGCCCATCACTTGG...AGTGTATAAAGCACTGTTCCCTGGGAGGTGTATGCATAAGGGCACACCCCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR TCA 90 bp GGCTCCACCACCATGAGCAGGAGCAGGCTCACCCAGAAGGAGCGCCATGGCCTGAATATTCAAAACACATaGTTTACAGTGCATGCCGTC +
Preference number: 4 (lower is better)
Translates to: GSTTMSRSRLTQKERHGLNIQNT*FTVHAV
Trigger: GACGGCATGCACTGTAAATCATGTGTTTTGAATATT...CAGGCCATGGCGCTCCTTCTGGGTGAGCCTGCTCCTGCTCATGGTGGTGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR TCA 90 bp GCAGTTCCAGTACCAAGGATGCCAGCTACACCAGGCAGAGAACAGACTCGTCTGTCTCCGGATCATACTTaGCCTCTGCCTTTCCCGACA +
Preference number: 4 (lower is better)
Translates to: AVPVPRMPATPGREQTRLSPDHT*PLPFPT
Trigger: TGTCGGGAAAGGCAGAGGTCAAGTATGATCCGGAGA...CAGACGAGTCTGTTCTCTGCCTGGTGTAGCTGGCATCCTTGGTACTGGAACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR TCA 90 bp TTGCATTGGGCTGCAAACCAGGGCGCCACCTTTAGGCGGGCAGATATGCAGGAGTTTTGCAAGGGCTTCTaGAGTTTTGCTCTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: LHWAANQGATFRRADMQEFCKGF*SFALGH
Trigger: GTGGCCAAGAGCAAAACTTCAGAAGCCCTTGCAAAA...CTCCTGCATATCTGCCCGCCTAAAGGTGGCGCCCTGGTTTGCAGCCCAATGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR TCA 90 bp GCAAGCACCGCTAAGGTGCAAAACCCAAAGCAGCCATCCCAAGTGATGGGTAGTGGAAGGCAAAGCGGATaGTCACCTCTGTCTGCGAGA +
Preference number: 4 (lower is better)
Translates to: ASTAKVQNPKQPSQVMGSGRQSG*SPLSAR
Trigger: TCTCGCAGACAGAGGTGATCATCCGCTTTGCCTTCC...ACTACCCATCACTTGGGATGGCTGCTTTGGGTTTTGCACCTTAGCGGTGCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR TCA 90 bp AGGGCAGGCAGTTCCAGTACCAAGGATGCCAGCTACACCAGGCAGAGAACAGACTGTCCTTTCATCTCGTaGTCTGTCATGGCGTCACTG +
Preference number: 4 (lower is better)
Translates to: RAGSSSTKDASYTRQRTDCPFIS*SVMASL
Trigger: CAGTGACGCCATGACAGATCACGAGATGAAAGGACA...GTCTGTTCTCTGCCTGGTGTAGCTGGCATCCTTGGTACTGGAACTGCCTGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR TCA 90 bp GGCCTTCGGAACCCTCTGAACGGCACATTGGCTGTGAGTTCCTGGGAAGACACCCCAATAAGTCATTTCTaGTCAGGACCACGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: GLRNPLNGTLAVSSWEDTPISHF*SGPRLL
Trigger: CAGCAGACGTGGTCCTGATCAGAAATGACTTATTGG...GGTGTCTTCCCAGGAACTCACAGCCAATGTGCCGTTCAGAGGGTTCCGAAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CCA 90 bp GGCCTTCGGAACCCTCTGAACGGCACATTGGCTGTGAGTTCCTGGGAAGACACCCAATGCCTTTCAGACTaGAGATCCTGTCCTCAATGG +
Preference number: 4 (lower is better)
Translates to: GLRNPLNGTLAVSSWEDTQCLSD*RSCPQW
Trigger: CCATTGAGGACAGGATCTCCAGTCTGAAAGGCATTG...GGTGTCTTCCCAGGAACTCACAGCCAATGTGCCGTTCAGAGGGTTCCGAAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CCA 90 bp CAAGCAGGGTGTGATCTCGCCCTCATGAAAAGCAGGAATGGTATACTTTCCCCAGAGTGGCCAGGACCTTaGTGTGTGGGGAGCCCTCTA +
Preference number: 4 (lower is better)
Translates to: QAGCDLALMKSRNGILSPEWPGP*CVGSPL
Trigger: TAGAGGGCTCCCCACACACCAAGGTCCTGGCCACTC...TGGGGAAAGTATACCATTCCTGCTTTTCATGAGGGCGAGATCACACCCTGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CCA 90 bp GAAGATAGAGGGCAGGCAGTTCCAGTACCAAGGATGCCAGCTACACCAGGCAGAGGATCGAACTTCACATaGGCTTTGCTGGTGGCAAGG +
Preference number: 4 (lower is better)
Translates to: EDRGQAVPVPRMPATPGRGSNFT*ALLVAR
Trigger: CCTTGCCACCAGCAAAGCCCATGTGAAGTTCGATCC...TCTGCCTGGTGTAGCTGGCATCCTTGGTACTGGAACTGCCTGCCCTCTATCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CCA 90 bp ACTTTCCCCAACCTAGTGGCTTCTGGAAGAGCAATCCTGCCCAGCCTCTGCAGAGAGAACGGACAGTCCTaGGATGATGTTGTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: TFPNLVASGRAILPSLCRENGQS*DDVVVQ
Trigger: CTGGACCACAACATCATCCCAGGACTGTCCGTTCTC...TCTGCAGAGGCTGGGCAGGATTGCTCTTCCAGAAGCCACTAGGTTGGGGAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR TCA 90 bp GAGTTCCTGGGAAGACACCGAGGCCCTCGGACCCTGTTTTCTTGTTTTCAGTCGGACTTGACGCAAGAATaGCAAGTCATGCCCAGGATG +
Preference number: 4 (lower is better)
Translates to: EFLGRHRGPRTLFSCFQSDLTQE*QVMPRM
Trigger: CATCCTGGGCATGACTTGTCATTCTTGCGTCAAGTC...CGACTGAAAACAAGAAAACAGGGTCCGAGGGCCTCGGTGTCTTCCCAGGAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR TCA 90 bp GAGTTCCTGGGAAGACACCGAGGCCCTCGGACCCTGTTTTCTTGTTTTCAGTCGCCCATATCCTCAATCTaGAGGCAAATCTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: EFLGRHRGPRTLFSCFQSPISSI*RQICCR
Trigger: CCTGCAGCAGATTTGCCTTCAGATTGAGGATATGGG...CGACTGAAAACAAGAAAACAGGGTCCGAGGGCCTCGGTGTCTTCCCAGGAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR TCA 90 bp GGCCTTCGGAACCCTCTGAACGGCACATTGGCTGTGAGTTCCTGGGAAGACACCTGCTTTCTAACTTGTTaGCATCAATTGGTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: GLRNPLNGTLAVSSWEDTCFLTC*HQLVPA
Trigger: GGCTGGGACCAATTGATGTCAACAAGTTAGAAAGCA...GGTGTCTTCCCAGGAACTCACAGCCAATGTGCCGTTCAGAGGGTTCCGAAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR TCA 90 bp GCAGTTCCAGTACCAAGGATGCCAGCTACACCAGGCAGAGAACAGACTCGTCTGTGGCTTGGAGTGACATaGGTTTTGCAAGGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: AVPVPRMPATPGREQTRLWLGVT*VLQGLL
Trigger: CAGAAGCCCTTGCAAAACTCATGTCACTCCAAGCCA...CAGACGAGTCTGTTCTCTGCCTGGTGTAGCTGGCATCCTTGGTACTGGAACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR TCA 90 bp GAAGATAGAGGGCAGGCAGTTCCAGTACCAAGGATGCCAGCTACACCAGGCAGAAGGAGCACAGAGCCATaGGCATTAATAGAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: EDRGQAVPVPRMPATPGRRSTEP*ALIEPA
Trigger: TGCTGGCTCTATTAATGCTCATGGCTCTGTGCTCCT...TCTGCCTGGTGTAGCTGGCATCCTTGGTACTGGAACTGCCTGCCCTCTATCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR GCA 90 bp GAAGATAGAGGGCAGGCAGTTCCAGTACCAAGGATGCCAGCTACACCAGGCAGAGAGATGGATGTTTGCTaGACACCTTTCCTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: EDRGQAVPVPRMPATPGREMDVC*TPFLWD
Trigger: GTCCCAGAGGAAAGGTGTGCAGCAAACATCCATCTC...TCTGCCTGGTGTAGCTGGCATCCTTGGTACTGGAACTGCCTGCCCTCTATCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR GCA 90 bp ACTTTCCCCAACCTAGTGGCTTCTGGAAGAGCAATCCTGCCCAGCCTCTGCAGATCTGTCTGCGAGATGTaGTTGCTAGGGCTAGGAAAG +
Preference number: 4 (lower is better)
Translates to: TFPNLVASGRAILPSLCRSVCEM*LLGLGK
Trigger: CTTTCCTAGCCCTAGCAAGCACATCTCGCAGACAGA...TCTGCAGAGGCTGGGCAGGATTGCTCTTCCAGAAGCCACTAGGTTGGGGAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CCA 90 bp GACAGGGGTGTGCCCTTATGCATACACCTCCCAGGGAACAGTGCTTTATACACTGTGGTAGTGCCTCGATaGCTGTCTGCAGGAACATGG +
Preference number: 4 (lower is better)
Translates to: DRGVPLCIHLPGNSALYTVVVPR*LSAGTW
Trigger: CCATGTTCCTGCAGACAGCCATCGAGGCACTACCAC...AGTGTATAAAGCACTGTTCCCTGGGAGGTGTATGCATAAGGGCACACCCCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CCA 90 bp CAAGCAGGGTGTGATCTCGCCCTCATGAAAAGCAGGAATGGTATACTTTCCCCAGGGGTCTCTGAAGAGTaGCCAGGACCTTGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: QAGCDLALMKSRNGILSPGVSEE*PGPWCV
Trigger: CACACACCAAGGTCCTGGCCACTCTTCAGAGACCCC...TGGGGAAAGTATACCATTCCTGCTTTTCATGAGGGCGAGATCACACCCTGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CCA 90 bp GCAGTTCCAGTACCAAGGATGCCAGCTACACCAGGCAGAGAACAGACTCGTCTGGGAGCCTTTGACATCTaGGCCTCTTCCACCAACTTT +
Preference number: 4 (lower is better)
Translates to: AVPVPRMPATPGREQTRLGAFDI*ASSTNF
Trigger: AAAGTTGGTGGAAGAGGCCCAGATGTCAAAGGCTCC...CAGACGAGTCTGTTCTCTGCCTGGTGTAGCTGGCATCCTTGGTACTGGAACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR TCA 90 bp CAAGCAGGGTGTGATCTCGCCCTCATGAAAAGCAGGAATGGTATACTTTCCCCATGGCCTCTTTGGCTGTaGCCTGTCTCTCCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: QAGCDLALMKSRNGILSPWPLWL*PVSPVQ
Trigger: CTGAACAGGAGAGACAGGTCACAGCCAAAGAGGCCA...TGGGGAAAGTATACCATTCCTGCTTTTCATGAGGGCGAGATCACACCCTGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR TCA 90 bp CCCAGGGAACAGTGCTTTATACACTACAGGTTATGGCATGGCTGTATAGGGTGCCTGAATGGGAGCCTTTaGCATCTGGGCCTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: PREQCFIHYRLWHGCIGCLNGSL*HLGLFH
Trigger: GTGGAAGAGGCCCAGATGTCAAAGGCTCCCATTCAG...GCACCCTATACAGCCATGCCATAACCTGTAGTGTATAAAGCACTGTTCCCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR TCA 90 bp ACGGCCCATGTGTGCTGCCTAACTCCAGGTGTTATGGGAGCTCTTAGTATAGGAGGACAAAATATCCACTaGACCGGTCAGCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: TAHVCCLTPGVMGALSIGGQNIH*TGQPAA
Trigger: AGCAGCTGGCTGACCGGTTCAGTGGATATTTTGTCC...TCCTATACTAAGAGCTCCCATAACACCTGGAGTTAGGCAGCACACATGGGCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR GCA 90 bp GAAGATAGAGGGCAGGCAGTTCCAGTACCAAGGATGCCAGCTACACCAGGCAGATGCTCCAGTCCCTTCTaGCAAAGAGATGGATGTTTG +
Preference number: 4 (lower is better)
Translates to: EDRGQAVPVPRMPATPGRCSSPF*QRDGCL
Trigger: CAAACATCCATCTCTTTGGCAGAAGGGACTGGAGCA...TCTGCCTGGTGTAGCTGGCATCCTTGGTACTGGAACTGCCTGCCCTCTATCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR GCA 90 bp GCAAGCACCGCTAAGGTGCAAAACCCAAAGCAGCCATCCCAAGTGATGGGTAGTGGGCTTCTGAAGTTTTaGTCTTGGCCACGTGTTCCA +
Preference number: 4 (lower is better)
Translates to: ASTAKVQNPKQPSQVMGSGLLKF*SWPRVP
Trigger: TGGAACACGTGGCCAAGAGCAAAACTTCAGAAGCCC...ACTACCCATCACTTGGGATGGCTGCTTTGGGTTTTGCACCTTAGCGGTGCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR GCA 90 bp GAAGATAGAGGGCAGGCAGTTCCAGTACCAAGGATGCCAGCTACACCAGGCAGACATCAGCCATGGTATTaGCTTCGAGGACTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: EDRGQAVPVPRMPATPGRHQPWY*LRGLSH
Trigger: ATGGGAAAGTCCTCGAAGGCAATACCATGGCTGATG...TCTGCCTGGTGTAGCTGGCATCCTTGGTACTGGAACTGCCTGCCCTCTATCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CCA 90 bp TTGCATTGGGCTGCAAACCAGGGCGCCACCTTTAGGCGGGCAGATATGCAGGAGGGGTCTCAAAATGATTaGAAATCTGGACAGGAGAGA +
Preference number: 4 (lower is better)
Translates to: LHWAANQGATFRRADMQEGSQND*KSGQER
Trigger: TCTCTCCTGTCCAGATTTCCAATCATTTTGAGACCC...CTCCTGCATATCTGCCCGCCTAAAGGTGGCGCCCTGGTTTGCAGCCCAATGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CCA 90 bp AGGGCAGGCAGTTCCAGTACCAAGGATGCCAGCTACACCAGGCAGAGAACAGACGGGTCATACTGTATTTaGGCGGTTTTGTTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: RAGSSSTKDASYTRQRTDGSYCI*AVLFSK
Trigger: CTTGGAGAACAAAACCGCCCAAATACAGTATGACCC...GTCTGTTCTCTGCCTGGTGTAGCTGGCATCCTTGGTACTGGAACTGCCTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CCA 90 bp ACGGCCCATGTGTGCTGCCTAACTCCAGGTGTTATGGGAGCTCTTAGTATAGGATGGGAGGAGCCACTTTaGGGCTCATTCTCCTCTACT +
Preference number: 4 (lower is better)
Translates to: TAHVCCLTPGVMGALSIGWEEPL*GSFSST
Trigger: AGTAGAGGAGAATGAGCCCCAAAGTGGCTCCTCCCA...TCCTATACTAAGAGCTCCCATAACACCTGGAGTTAGGCAGCACACATGGGCCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CCA 90 bp CAAGCAGGGTGTGATCTCGCCCTCATGAAAAGCAGGAATGGTATACTTTCCCCACAGCCAGCTGCTGAATaGGAGCCTTTGACATCTGGG +
Preference number: 4 (lower is better)
Translates to: QAGCDLALMKSRNGILSPQPAAE*EPLTSG
Trigger: CCCAGATGTCAAAGGCTCCCATTCAGCAGCTGGCTG...TGGGGAAAGTATACCATTCCTGCTTTTCATGAGGGCGAGATCACACCCTGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR TCA 90 bp GCAGTTCCAGTACCAAGGATGCCAGCTACACCAGGCAGAGAACAGACTCGTCTGTGTCCTCAATGGACTTaGCGCAAGAATGACAAGTCA +
Preference number: 4 (lower is better)
Translates to: AVPVPRMPATPGREQTRLCPQWT*RKNDKS
Trigger: TGACTTGTCATTCTTGCGTCAAGTCCATTGAGGACA...CAGACGAGTCTGTTCTCTGCCTGGTGTAGCTGGCATCCTTGGTACTGGAACTGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR TCA 90 bp CAAGCAGGGTGTGATCTCGCCCTCATGAAAAGCAGGAATGGTATACTTTCCCCAGCACCTGCTCCTCTCTaGGGATTAAGTTGTCCTCAC +
Preference number: 4 (lower is better)
Translates to: QAGCDLALMKSRNGILSPAPAPL*GLSCPH
Trigger: GTGAGGACAACTTAATCCTCAGAGAGGAGCAGGTGC...TGGGGAAAGTATACCATTCCTGCTTTTCATGAGGGCGAGATCACACCCTGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR TCA 90 bp GCAGTTCCAGTACCAAGGATGCCAGCTACACCAGGCAGAGAACAGACTCGTCTGCACCAGGGTCAAGGTTaGAATGATGATGATGAATGG +
Preference number: 4 (lower is better)
Translates to: AVPVPRMPATPGREQTRLHQGQG*NDDDEW
Trigger: CCATTCATCATCATCATTTCAACCTTGACCCTGGTG...CAGACGAGTCTGTTCTCTGCCTGGTGTAGCTGGCATCCTTGGTACTGGAACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR GCA 90 bp CCCAGGGAACAGTGCTTTATACACTACAGGTTATGGCATGGCTGTATAGGGTGCTCATCCATGCCAATGTaGACGCTGACTTGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: PREQCFIHYRLWHGCIGCSSMPM*TLTWEA
Trigger: TGCCTCCCAAGTCAGCGTGCACATTGGCATGGATGA...GCACCCTATACAGCCATGCCATAACCTGTAGTGTATAAAGCACTGTTCCCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CCA 90 bp GAGTTCCTGGGAAGACACCGAGGCCCTCGGACCCTGTTTTCTTGTTTTCAGTCGGTAATGACTGCCTCTTaGTTGCTTAGGGAGACTTTG +
Preference number: 4 (lower is better)
Translates to: EFLGRHRGPRTLFSCFQSVMTAS*LLRETL
Trigger: CAAAGTCTCCCTAAGCAACCAAGAGGCAGTCATTAC...CGACTGAAAACAAGAAAACAGGGTCCGAGGGCCTCGGTGTCTTCCCAGGAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CCA 90 bp AGGGCAGGCAGTTCCAGTACCAAGGATGCCAGCTACACCAGGCAGAGAACAGACATCACCCATGGTTTGTaGCACAGAATTCCCAGATTT +
Preference number: 4 (lower is better)
Translates to: RAGSSSTKDASYTRQRTDITHGL*HRIPRF
Trigger: AAATCTGGGAATTCTGTGCCACAAACCATGGGTGAT...GTCTGTTCTCTGCCTGGTGTAGCTGGCATCCTTGGTACTGGAACTGCCTGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CCA 90 bp GGCCTTCGGAACCCTCTGAACGGCACATTGGCTGTGAGTTCCTGGGAAGACACCATACCAGCATGTCTCTaGAGACTCCTTTCTATGTTA +
Preference number: 4 (lower is better)
Translates to: GLRNPLNGTLAVSSWEDTIPACL*RLLSML
Trigger: TAACATAGAAAGGAGTCTCCAGAGACATGCTGGTAT...GGTGTCTTCCCAGGAACTCACAGCCAATGTGCCGTTCAGAGGGTTCCGAAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CCA 90 bp ACTTTCCCCAACCTAGTGGCTTCTGGAAGAGCAATCCTGCCCAGCCTCTGCAGACACCCACCCAGAAATTaGACAAAGGTACACAAGATG +
Preference number: 4 (lower is better)
Translates to: TFPNLVASGRAILPSLCRHPPRN*TKVHKM
Trigger: CATCTTGTGTACCTTTGTCCAATTTCTGGGTGGGTG...TCTGCAGAGGCTGGGCAGGATTGCTCTTCCAGAAGCCACTAGGTTGGGGAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CCA 90 bp ACGGCCCATGTGTGCTGCCTAACTCCAGGTGTTATGGGAGCTCTTAGTATAGGAACAGTGATGGACGTCTaGAAGGCAAAGCGGATGATC +
Preference number: 4 (lower is better)
Translates to: TAHVCCLTPGVMGALSIGTVMDV*KAKRMI
Trigger: GATCATCCGCTTTGCCTTCCAGACGTCCATCACTGT...TCCTATACTAAGAGCTCCCATAACACCTGGAGTTAGGCAGCACACATGGGCCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR TCA 90 bp GACAGGGGTGTGCCCTTATGCATACACCTCCCAGGGAACAGTGCTTTATACACTCACAGGTCATGCCTTTaGTCTGTACGAAGCACTTCT +
Preference number: 4 (lower is better)
Translates to: DRGVPLCIHLPGNSALYTHRSCL*SVRSTS
Trigger: AGAAGTGCTTCGTACAGATCAAAGGCATGACCTGTG...AGTGTATAAAGCACTGTTCCCTGGGAGGTGTATGCATAAGGGCACACCCCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR TCA 90 bp CAAGCAGGGTGTGATCTCGCCCTCATGAAAAGCAGGAATGGTATACTTTCCCCAATGTCTTCGATAGGCTaGACAGATGAGGCACAGGTA +
Preference number: 4 (lower is better)
Translates to: QAGCDLALMKSRNGILSPMSSIG*TDEAQV
Trigger: TACCTGTGCCTCATCTGTTCAGCCTATCGAAGACAT...TGGGGAAAGTATACCATTCCTGCTTTTCATGAGGGCGAGATCACACCCTGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR GCA 90 bp AAGGCTAGCAGGATGCTCAGGTCTCACCATGAGCTTCGTCCATCCCACAGTGGCACACATGATTTACAGTaGATGCCGTCTATTCTTAGT +
Preference number: 4 (lower is better)
Translates to: KASRMLRSHHELRPSHSGTHDLQ*MPSILS
Trigger: ACTAAGAATAGACGGCATGCACTGTAAATCATGTGT...GCCACTGTGGGATGGACGAAGCTCATGGTGAGACCTGAGCATCCTGCTAGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CCA 90 bp GACAGGGGTGTGCCCTTATGCATACACCTCCCAGGGAACAGTGCTTTATACACTGTGTCATTACCCACATaGGTAGCTTTAAGGAGCACA +
Preference number: 4 (lower is better)
Translates to: DRGVPLCIHLPGNSALYTVSLPT*VALRST
Trigger: TGTGCTCCTTAAAGCTACCCATGTGGGTAATGACAC...AGTGTATAAAGCACTGTTCCCTGGGAGGTGTATGCATAAGGGCACACCCCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
3UTR CAA 72 bp CCTTTAGATGTCTCCTCAGCAGCAGACAGCTCTCTATaGAGAACTTCACTCTCTTCTGGTGGGAAAACTCCC +
Preference number: 4 (lower is better)
Translates to: PLDVSSAADSSL*RTSLSSGGKTP
Trigger: GGGAGTTTTCCCACCAGAAGAGAGTGAAGTTCTCAATAGAGAGCTGTCTGCTGCTGAGGAGACATCTAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR TCA 90 bp CCCAGGGAACAGTGCTTTATACACTACAGGTTATGGCATGGCTGTATAGGGTGCTGCCATTTGTCCTTGTaGGCTTGGACTCTATGTTGT +
Preference number: 4 (lower is better)
Translates to: PREQCFIHYRLWHGCIGCCHLSL*AWTLCC
Trigger: ACAACATAGAGTCCAAGCTCACAAGGACAAATGGCA...GCACCCTATACAGCCATGCCATAACCTGTAGTGTATAAAGCACTGTTCCCTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR TCA 90 bp GAAGATAGAGGGCAGGCAGTTCCAGTACCAAGGATGCCAGCTACACCAGGCAGAACCAACTTTACAATCTaGGCCAAAGTTGTGTCATTA +
Preference number: 4 (lower is better)
Translates to: EDRGQAVPVPRMPATPGRTNFTI*AKVVSL
Trigger: TAATGACACAACTTTGGCTCAGATTGTAAAGTTGGT...TCTGCCTGGTGTAGCTGGCATCCTTGGTACTGGAACTGCCTGCCCTCTATCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR GCA 90 bp CAAGCAGGGTGTGATCTCGCCCTCATGAAAAGCAGGAATGGTATACTTTCCCCAAAAGAGATGGATGTTTaGTGCACACCTTTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: QAGCDLALMKSRNGILSPKEMDV*CTPFLW
Trigger: CCAGAGGAAAGGTGTGCAGCAAACATCCATCTCTTT...TGGGGAAAGTATACCATTCCTGCTTTTCATGAGGGCGAGATCACACCCTGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS TCA 90 bp CCCTGGGAGAATCCCGACGCCGGTCATCCATGCCAATGTGCACGCTaGCTTGGGAGGCACTCAGGGGCTTCATGCGGCCGTGGGCCTGGG +
Preference number: 5 (lower is better)
Translates to: PWENPDAGHPCQCAR*LGRHSGASCGRGPG
Trigger: CCCAGGCCCACGGCCGCATGAAGCCCCTGAGTGCCTCCCAAGTCAGCGTGCACATTGGCATGGATGACCGGCGTCGGGATTCTCCCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS GCA 90 bp GCGGTGGCCCTGGGAGAATCCCGACGCCGGTCATCCATGCCAATGTaGACGCTGACTTGGGAGGCACTCAGGGGCTTCATGCGGCCGTGG +
Preference number: 5 (lower is better)
Translates to: AVALGESRRRSSMPM*TLTWEALRGFMRPW
Trigger: CCACGGCCGCATGAAGCCCCTGAGTGCCTCCCAAGTCAGCGTGCACATTGGCATGGATGACCGGCGTCGGGATTCTCCCAGGGCCACCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS GCA 90 bp CAGGTAATGCCGCTGATGGTGAGCACCGCAGTCCTGCCCGGGCCCTaGTCCTGGTGTCTCTGGGAGGAGCCACTTTGGGGCTCATTCTCC +
Preference number: 5 (lower is better)
Translates to: QVMPLMVSTAVLPGP*SWCLWEEPLWGSFS
Trigger: GGAGAATGAGCCCCAAAGTGGCTCCTCCCAGAGACACCAGGAGCAGGGCCCGGGCAGGACTGCGGTGCTCACCATCAGCGGCATTACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CAA 90 bp GGCTCCACCACCATGAGCAGGAGCAGGCTCACCCAGAAGGAGCGCCATGGCCTGGACAGTGGCGCTGCCTaGTTCCAGGGACACCTTGAT +
Preference number: 5 (lower is better)
Translates to: GSTTMSRSRLTQKERHGLDSGAA*FQGHLD
Trigger: ATCAAGGTGTCCCTGGAACAAGGCAGCGCCACTGTC...CAGGCCATGGCGCTCCTTCTGGGTGAGCCTGCTCCTGCTCATGGTGGTGGAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS GCA 90 bp AGGAGCAGGGACCATTTGTCGCCACCGTCCTCTGCTGCCCCGCCATaGCGAGACAATCTGTCTGACGTCAGGGAGGACAGAGACACTTGG +
Preference number: 5 (lower is better)
Translates to: RSRDHLSPPSSAAPP*RDNLSDVREDRDTW
Trigger: CCAAGTGTCTCTGTCCTCCCTGACGTCAGACAGATTGTCTCGGCATGGCGGGGCAGCAGAGGACGGTGGCGACAAATGGTCCCTGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS-3UTR CAA 90 bp GAAGATAGAGGGCAGGCAGTTCCAGTACCAAGGATGCCAGCTACACCAGGCAGACCCTCTACCCGGAGCTaGACCACCGCCTCCTGGGCT +
Preference number: 5 (lower is better)
Translates to: EDRGQAVPVPRMPATPGRPSTRS*TTASWA
Trigger: AGCCCAGGAGGCGGTGGTCAAGCTCCGGGTAGAGGG...TCTGCCTGGTGTAGCTGGCATCCTTGGTACTGGAACTGCCTGCCCTCTATCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CAA 90 bp GGGGGAGGGCGCTGTGGGTGTCCCTCCTTTAGATGTCTCCTCAGCAGCAGACAGACTTCTGTGATGCTGTaGCTCCCGGGGATGATGGGG +
Preference number: 5 (lower is better)
Translates to: GGGRCGCPSFRCLLSSRQTSVML*LPGMMG
Trigger: CCCCATCATCCCCGGGAGCAACAGCATCACAGAAGT...CTGTCTGCTGCTGAGGAGACATCTAAAGGAGGGACACCCACAGCGCCCTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CAA 90 bp GGCTCCACCACCATGAGCAGGAGCAGGCTCACCCAGAAGGAGCGCCATGGCCTGATCTCCGGATCATACTaGACCTCTGCCTTTCCCGAC +
Preference number: 5 (lower is better)
Translates to: GSTTMSRSRLTQKERHGLISGSY*TSAFPD
Trigger: GTCGGGAAAGGCAGAGGTCAAGTATGATCCGGAGAT...CAGGCCATGGCGCTCCTTCTGGGTGAGCCTGCTCCTGCTCATGGTGGTGGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS GCA 90 bp CATCCATTCCCGGTTTCCAATCAGCACGGAGAAGGTCTGGGGACCTaGACCTTCCCCTGTGGGAGGGTTGCCAACTCCAACAGGGTGAGC +
Preference number: 5 (lower is better)
Translates to: HPFPVSNQHGEGLGT*TFPCGRVANSNRVS
Trigger: GCTCACCCTGTTGGAGTTGGCAACCCTCCCACAGGGGAAGGTGCAGGTCCCCAGACCTTCTCCGTGCTGATTGGAAACCGGGAATGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS CCA 90 bp GGGAGGACCTGGAAGGCCAGGAGGCGGCCTTTCCCTCTGCAGCGCTaGCCTCAAAGCCCATATCCTCAATCTGAAGGCAAATCTGCTGCA +
Preference number: 5 (lower is better)
Translates to: GRTWKARRRPFPLQR*PQSPYPQSEGKSAA
Trigger: TGCAGCAGATTTGCCTTCAGATTGAGGATATGGGCTTTGAGGCCAGCGCTGCAGAGGGAAAGGCCGCCTCCTGGCCTTCCAGGTCCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS CCA 90 bp CCCAGGGAGCAGGGGCAGGCGATGCACAGCACAGTGATGGACGTCTaGAAGGCAAAGCGGATGATCACCTCTGTCTGCGAGATGTGCTTG +
Preference number: 5 (lower is better)
Translates to: PREQGQAMHSTVMDV*KAKRMITSVCEMCL
Trigger: CAAGCACATCTCGCAGACAGAGGTGATCATCCGCTTTGCCTTCCAGACGTCCATCACTGTGCTGTGCATCGCCTGCCCCTGCTCCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS-3UTR CAA 90 bp GAAGATAGAGGGCAGGCAGTTCCAGTACCAAGGATGCCAGCTACACCAGGCAGACCCCCAGGGACAACCTaGATGACGTCGCCTCGCTGC +
Preference number: 5 (lower is better)
Translates to: EDRGQAVPVPRMPATPGRPPGTT*MTSPRC
Trigger: GCAGCGAGGCGACGTCATCAAGGTTGTCCCTGGGGG...TCTGCCTGGTGTAGCTGGCATCCTTGGTACTGGAACTGCCTGCCCTCTATCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS GCA 90 bp ACTGGGAACTTGCCCCCAGGGACAACCTTGATGACGTCGCCTCGCTaGACCAGCTCCATGGGCACCTGCTCCTCTCTGAGGATTAAGTTG +
Preference number: 5 (lower is better)
Translates to: TGNLPPGTTLMTSPR*TSSMGTCSSLRIKL
Trigger: CAACTTAATCCTCAGAGAGGAGCAGGTGCCCATGGAGCTGGTGCAGCGAGGCGACGTCATCAAGGTTGTCCCTGGGGGCAAGTTCCCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS CCA 90 bp GTCCTGCCCGGGCCCTGCTCCTGGTGTCTCTGGGAGGAGCCACTTTaGGGCTCATTCTCCTCTACTCCATCGGGAAGAGACACTTTAAAG +
Preference number: 5 (lower is better)
Translates to: VLPGPCSWCLWEEPL*GSFSSTPSGRDTLK
Trigger: CTTTAAAGTGTCTCTTCCCGATGGAGTAGAGGAGAATGAGCCCCAAAGTGGCTCCTCCCAGAGACACCAGGAGCAGGGCCCGGGCAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS CCA 90 bp TTCCAATCAGCACGGAGAAGGTCTGGGGACCTGCACCTTCCCCTGTaGGAGGGTTGCCAACTCCAACAGGGTGAGCAGTCAGATCACTGC +
Preference number: 5 (lower is better)
Translates to: FQSARRRSGDLHLPL*EGCQLQQGEQSDHC
Trigger: GCAGTGATCTGACTGCTCACCCTGTTGGAGTTGGCAACCCTCCCACAGGGGAAGGTGCAGGTCCCCAGACCTTCTCCGTGCTGATTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS CCA 90 bp TTTCGCCGCATCCATTCCCGGTTTCCAATCAGCACGGAGAAGGTCTaGGGACCTGCACCTTCCCCTGTGGGAGGGTTGCCAACTCCAACA +
Preference number: 5 (lower is better)
Translates to: FRRIHSRFPISTEKV*GPAPSPVGGLPTPT
Trigger: TGTTGGAGTTGGCAACCCTCCCACAGGGGAAGGTGCAGGTCCCCAGACCTTCTCCGTGCTGATTGGAAACCGGGAATGGATGCGGCGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS-3UTR CAA 90 bp GGGGGAGGGCGCTGTGGGTGTCCCTCCTTTAGATGTCTCCTCAGCAGCAGACAGTCTGAAGTTTTGCTCTaGGCCACGTGTTCCAGCCAC +
Preference number: 5 (lower is better)
Translates to: GGGRCGCPSFRCLLSSRQSEVLL*ATCSSH
Trigger: GTGGCTGGAACACGTGGCCAAGAGCAAAACTTCAGA...CTGTCTGCTGCTGAGGAGACATCTAAAGGAGGGACACCCACAGCGCCCTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS GCA 90 bp GCCCTCCACGTTGCTAACTTTGCAGCTAATTCCACAGCCGGGCACTaGCTGGAAGTCTGTGCTGTATCCCAGGGTCTCCGTCCCAAGTTC +
Preference number: 5 (lower is better)
Translates to: ALHVANFAANSTAGH*LEVCAVSQGLRPKF
Trigger: GAACTTGGGACGGAGACCCTGGGATACAGCACAGACTTCCAGGCAGTGCCCGGCTGTGGAATTAGCTGCAAAGTTAGCAACGTGGAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS CCA 90 bp GGACTCATCAGCCATGGTATTGCCTTCGAGGACTTTCCCATCCACTaGGAACTTGCCCCCAGGGACAACCTTGATGACGTCGCCTCGCTG +
Preference number: 5 (lower is better)
Translates to: GLISHGIAFEDFPIH*ELAPRDNLDDVASL
Trigger: CAGCGAGGCGACGTCATCAAGGTTGTCCCTGGGGGCAAGTTCCCAGTGGATGGGAAAGTCCTCGAAGGCAATACCATGGCTGATGAGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS-3UTR CAA 90 bp GGGGGAGGGCGCTGTGGGTGTCCCTCCTTTAGATGTCTCCTCAGCAGCAGACAGGGAGCTGTTCTGTTCTaGATGGCAGCTTCAAATCCC +
Preference number: 5 (lower is better)
Translates to: GGGRCGCPSFRCLLSSRQGAVLF*MAASNP
Trigger: GGGATTTGAAGCTGCCATCAAGAACAGAACAGCTCC...CTGTCTGCTGCTGAGGAGACATCTAAAGGAGGGACACCCACAGCGCCCTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CAA 90 bp GGCTCCACCACCATGAGCAGGAGCAGGCTCACCCAGAAGGAGCGCCATGGCCTGGTGCTTTCTAACTTGTaGACATCAATTGGTCCCAGC +
Preference number: 5 (lower is better)
Translates to: GSTTMSRSRLTQKERHGLVLSNL*TSIGPS
Trigger: GCTGGGACCAATTGATGTCAACAAGTTAGAAAGCAC...CAGGCCATGGCGCTCCTTCTGGGTGAGCCTGCTCCTGCTCATGGTGGTGGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CAA 90 bp AAGGCTAGCAGGATGCTCAGGTCTCACCATGAGCTTCGTCCATCCCACAGTGGCCTGGGAGGAGCCACTTaGGGGCTCATTCTCCTCTAC +
Preference number: 5 (lower is better)
Translates to: KASRMLRSHHELRPSHSGLGGAT*GLILLY
Trigger: GTAGAGGAGAATGAGCCCCAAAGTGGCTCCTCCCAG...GCCACTGTGGGATGGACGAAGCTCATGGTGAGACCTGAGCATCCTGCTAGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CAA 90 bp ACTTTCCCCAACCTAGTGGCTTCTGGAAGAGCAATCCTGCCCAGCCTCTGCAGACCATCCACTGGGAACTaGCCCCCAGGGACAACCTTG +
Preference number: 5 (lower is better)
Translates to: TFPNLVASGRAILPSLCRPSTGN*PPGTTL
Trigger: CAAGGTTGTCCCTGGGGGCAAGTTCCCAGTGGATGG...TCTGCAGAGGCTGGGCAGGATTGCTCTTCCAGAAGCCACTAGGTTGGGGAAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CAA 90 bp GGGGGAGGGCGCTGTGGGTGTCCCTCCTTTAGATGTCTCCTCAGCAGCAGACAGTCCACGTTGCTAACTTaGCAGCTAATTCCACAGCCG +
Preference number: 5 (lower is better)
Translates to: GGGRCGCPSFRCLLSSRQSTLLT*QLIPQP
Trigger: CGGCTGTGGAATTAGCTGCAAAGTTAGCAACGTGGA...CTGTCTGCTGCTGAGGAGACATCTAAAGGAGGGACACCCACAGCGCCCTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CAA 90 bp GAGTTCCTGGGAAGACACCGAGGCCCTCGGACCCTGTTTTCTTGTTTTCAGTCGCTGGCTGTCTTCCGGTaGTCCCCTGTGATCAGAGCC +
Preference number: 5 (lower is better)
Translates to: EFLGRHRGPRTLFSCFQSLAVFR*SPVIRA
Trigger: GGCTCTGATCACAGGGGACAACCGGAAGACAGCCAG...CGACTGAAAACAAGAAAACAGGGTCCGAGGGCCTCGGTGTCTTCCCAGGAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS TCA 90 bp GGGCCTGGGCCTCATATCTCTCTAGGTCGGGCTTTCTATAGCACTTaGGCTGAAGAGACGAGAGCACCACAGAGACAGAGGACGCAGCCA +
Preference number: 5 (lower is better)
Translates to: GPGPHISLGRAFYST*AEETRAPQRQRTQP
Trigger: TGGCTGCGTCCTCTGTCTCTGTGGTGCTCTCGTCTCTTCAGCTCAAGTGCTATAGAAAGCCCGACCTAGAGAGATATGAGGCCCAGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS GCA 90 bp GCAAGAATGACAAGTCATGCCCAGGATGTTAACCACATCAGTGGCTaGTGGGGACGAGCTGGTGCTGTCCAGACCCCCTTCGTAGCCAAC +
Preference number: 5 (lower is better)
Translates to: ARMTSHAQDVNHISG*WGRAGAVQTPFVAN
Trigger: GTTGGCTACGAAGGGGGTCTGGACAGCACCAGCTCGTCCCCAGCAGCCACTGATGTGGTTAACATCCTGGGCATGACTTGTCATTCTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS-3UTR CAA 90 bp GAAGATAGAGGGCAGGCAGTTCCAGTACCAAGGATGCCAGCTACACCAGGCAGATTCCGACTGGCCTCTTaGGCTGTGACCTGTCTCTCC +
Preference number: 5 (lower is better)
Translates to: EDRGQAVPVPRMPATPGRFRLAS*AVTCLS
Trigger: GGAGAGACAGGTCACAGCCAAAGAGGCCAGTCGGAA...TCTGCCTGGTGTAGCTGGCATCCTTGGTACTGGAACTGCCTGCCCTCTATCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CAA 90 bp GGGGGAGGGCGCTGTGGGTGTCCCTCCTTTAGATGTCTCCTCAGCAGCAGACAGTTGAACCCCCGGGAGTaGGCCTATATTTCCTTCAAT +
Preference number: 5 (lower is better)
Translates to: GGGRCGCPSFRCLLSSRQLNPRE*AYISFN
Trigger: ATTGAAGGAAATATAGGCCAACTCCCGGGGGTTCAA...CTGTCTGCTGCTGAGGAGACATCTAAAGGAGGGACACCCACAGCGCCCTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CAA 90 bp GACAGGGGTGTGCCCTTATGCATACACCTCCCAGGGAACAGTGCTTTATACACTAGAGTGGCCAGGACCTaGGTGTGTGGGGAGCCCTCT +
Preference number: 5 (lower is better)
Translates to: DRGVPLCIHLPGNSALYTRVART*VCGEPS
Trigger: AGAGGGCTCCCCACACACCAAGGTCCTGGCCACTCT...AGTGTATAAAGCACTGTTCCCTGGGAGGTGTATGCATAAGGGCACACCCCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CAA 90 bp GGCCTTCGGAACCCTCTGAACGGCACATTGGCTGTGAGTTCCTGGGAAGACACCAGGGCTTCTGAAGTTTaGCTCTTGGCCACGTGTTCC +
Preference number: 5 (lower is better)
Translates to: GLRNPLNGTLAVSSWEDTRASEV*LLATCS
Trigger: GGAACACGTGGCCAAGAGCAAAACTTCAGAAGCCCT...GGTGTCTTCCCAGGAACTCACAGCCAATGTGCCGTTCAGAGGGTTCCGAAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS TCA 90 bp TTGTCCTCCATGACTGACGCTTCGAAGCCCAGGTCCTGGATGAGCTaGGCTATCCTGGGCGACTGGATGATCTCCGGATCATACTTGACC +
Preference number: 5 (lower is better)
Translates to: LSSMTDASKPRSWMS*AILGDWMISGSYLT
Trigger: GGTCAAGTATGATCCGGAGATCATCCAGTCGCCCAGGATAGCTCAGCTCATCCAGGACCTGGGCTTCGAAGCGTCAGTCATGGAGGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS GCA 90 bp TGGGGCTCATTCTCCTCTACTCCATCGGGAAGAGACACTTTAAAGTaGCCAGGTGGTAGTGCCTCGATGGCTGTCTGCAGGAACATGGGG +
Preference number: 5 (lower is better)
Translates to: WGSFSSTPSGRDTLK*PGGSASMAVCRNMG
Trigger: CCCCATGTTCCTGCAGACAGCCATCGAGGCACTACCACCTGGGCACTTTAAAGTGTCTCTTCCCGATGGAGTAGAGGAGAATGAGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS CCA 90 bp TCCACGTTGCTAACTTTGCAGCTAATTCCACAGCCGGGCACTGCCTaGAAGTCTGTGCTGTATCCCAGGGTCTCCGTCCCAAGTTCCTCT +
Preference number: 5 (lower is better)
Translates to: STLLTLQLIPQPGTA*KSVLYPRVSVPSSS
Trigger: AGAGGAACTTGGGACGGAGACCCTGGGATACAGCACAGACTTCCAGGCAGTGCCCGGCTGTGGAATTAGCTGCAAAGTTAGCAACGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS-3UTR CAA 90 bp GAGTTCCTGGGAAGACACCGAGGCCCTCGGACCCTGTTTTCTTGTTTTCAGTCGGGACACGTGAATATTTaGAACCCCCGGGAGTTGGCC +
Preference number: 5 (lower is better)
Translates to: EFLGRHRGPRTLFSCFQSGHVNI*NPRELA
Trigger: GGCCAACTCCCGGGGGTTCAAAATATTCACGTGTCC...CGACTGAAAACAAGAAAACAGGGTCCGAGGGCCTCGGTGTCTTCCCAGGAACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CAA 90 bp GCAGTTCCAGTACCAAGGATGCCAGCTACACCAGGCAGAGAACAGACTCGTCTGAACTTCACATGGGCTTaGCTGGTGGCAAGGGCCACA +
Preference number: 5 (lower is better)
Translates to: AVPVPRMPATPGREQTRLNFTWA*LVARAT
Trigger: TGTGGCCCTTGCCACCAGCAAAGCCCATGTGAAGTT...CAGACGAGTCTGTTCTCTGCCTGGTGTAGCTGGCATCCTTGGTACTGGAACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CAA 90 bp GCAGTTCCAGTACCAAGGATGCCAGCTACACCAGGCAGAGAACAGACTCGTCTGATGAGTACGTCCATGTaGGCGGACCTGTGTCTCAGC +
Preference number: 5 (lower is better)
Translates to: AVPVPRMPATPGREQTRLMSTSM*ADLCLS
Trigger: GCTGAGACACAGGTCCGCCAACATGGACGTACTCAT...CAGACGAGTCTGTTCTCTGCCTGGTGTAGCTGGCATCCTTGGTACTGGAACTGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CAA 90 bp ACGGCCCATGTGTGCTGCCTAACTCCAGGTGTTATGGGAGCTCTTAGTATAGGAAGGGCAGCCTCTGGTTaGACAGCATCTGCGATGGCG +
Preference number: 5 (lower is better)
Translates to: TAHVCCLTPGVMGALSIGRAASG*TASAMA
Trigger: CGCCATCGCAGATGCTGTCAAACCAGAGGCTGCCCT...TCCTATACTAAGAGCTCCCATAACACCTGGAGTTAGGCAGCACACATGGGCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS TCA 90 bp GCCCAGGTGGTAGTGCCTCGATGGCTGTCTGCAGGAACATGGGGGTaGCACAAGAAGGGTCATACTGTATTTGGGCGGTTTTGTTCTCCA +
Preference number: 5 (lower is better)
Translates to: AQVVVPRWLSAGTWG*HKKGHTVFGRFCSP
Trigger: TGGAGAACAAAACCGCCCAAATACAGTATGACCCTTCTTGTGTCACCCCCATGTTCCTGCAGACAGCCATCGAGGCACTACCACCTGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS TCA 90 bp CCTGAGGCGTACTGCTGGGGATTAACATGTAGACCATCAATCCCATaGCGGGGATGCCGAACACCAGGCTGCACAGGAAAGACTTCTTCC +
Preference number: 5 (lower is better)
Translates to: PEAYCWGLTCRPSIP*RGCRTPGCTGKTSS
Trigger: GGAAGAAGTCTTTCCTGTGCAGCCTGGTGTTCGGCATCCCCGTCATGGGATTGATGGTCTACATGTTAATCCCCAGCAGTACGCCTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS TCA 90 bp AGCACCAGATTGACCCGGATCCTCCGGACGGTCCTCTTGGAGAGATaGATGCTGGCCACGACGTCCAATAAGTCATTTCTGATCAGGACC +
Preference number: 5 (lower is better)
Translates to: STRLTRILRTVLLER*MLATTSNKSFLIRT
Trigger: GGTCCTGATCAGAAATGACTTATTGGACGTCGTGGCCAGCATTCATCTCTCCAAGAGGACCGTCCGGAGGATCCGGGTCAATCTGGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS CCA 90 bp AGAATGACAAGTCATGCCCAGGATGTTAACCACATCAGTGGCTGCTaGGGACGAGCTGGTGCTGTCCAGACCCCCTTCGTAGCCAACATT +
Preference number: 5 (lower is better)
Translates to: RMTSHAQDVNHISGC*GRAGAVQTPFVANI
Trigger: AATGTTGGCTACGAAGGGGGTCTGGACAGCACCAGCTCGTCCCCAGCAGCCACTGATGTGGTTAACATCCTGGGCATGACTTGTCATTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS-3UTR CAA 90 bp TTGCATTGGGCTGCAAACCAGGGCGCCACCTTTAGGCGGGCAGATATGCAGGAGATGAAGAAGATGAGATaGAGAACGGACAGTCCTGGG +
Preference number: 5 (lower is better)
Translates to: LHWAANQGATFRRADMQEMKKMR*RTDSPG
Trigger: CCCAGGACTGTCCGTTCTCAATCTCATCTTCTTCAT...CTCCTGCATATCTGCCCGCCTAAAGGTGGCGCCCTGGTTTGCAGCCCAATGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CAA 90 bp GAAGATAGAGGGCAGGCAGTTCCAGTACCAAGGATGCCAGCTACACCAGGCAGAGTCTGCGAGATGTGCTaGCTAGGGCTAGGAAAGTAC +
Preference number: 5 (lower is better)
Translates to: EDRGQAVPVPRMPATPGRVCEMC*LGLGKY
Trigger: GTACTTTCCTAGCCCTAGCAAGCACATCTCGCAGAC...TCTGCCTGGTGTAGCTGGCATCCTTGGTACTGGAACTGCCTGCCCTCTATCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CAA 90 bp ACGGCCCATGTGTGCTGCCTAACTCCAGGTGTTATGGGAGCTCTTAGTATAGGAGGAGGACAGAGACACTaGGCTCACGTAGCTGACCTG +
Preference number: 5 (lower is better)
Translates to: TAHVCCLTPGVMGALSIGGGQRH*AHVADL
Trigger: CAGGTCAGCTACGTGAGCCAAGTGTCTCTGTCCTCC...TCCTATACTAAGAGCTCCCATAACACCTGGAGTTAGGCAGCACACATGGGCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS TCA 90 bp GCCTTTCCCTCTGCAGCGCTGGCCTCAAAGCCCATATCCTCAATCTaGAGGCAAATCTGCTGCAGGTTCATGACAGACGGCACATATCTG +
Preference number: 5 (lower is better)
Translates to: AFPSAALASKPISSI*RQICCRFMTDGTYL
Trigger: CAGATATGTGCCGTCTGTCATGAACCTGCAGCAGATTTGCCTTCAGATTGAGGATATGGGCTTTGAGGCCAGCGCTGCAGAGGGAAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS TCA 90 bp CCTCAAATCCCATGTCTTCTACAGCCGTTCGGAGTTCGTCCAAGCTaGCTATGGAGGGGTCGTAAAGAACTGCTCCAGTCCCTTCTGCCA +
Preference number: 5 (lower is better)
Translates to: PQIPCLLQPFGVRPS*LWRGRKELLQSLLP
Trigger: TGGCAGAAGGGACTGGAGCAGTTCTTTACGACCCCTCCATAGTCAGCTTGGACGAACTCCGAACGGCTGTAGAAGACATGGGATTTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS TCA 90 bp AATCAGTTCGATGTCACCTTCAGAGACTGTGTTGTCCTCCATGACTaGCGCTTCGAAGCCCAGGTCCTGGATGAGCTGAGCTATCCTGGG +
Preference number: 5 (lower is better)
Translates to: NQFDVTFRDCVVLHD*RFEAQVLDELSYPG
Trigger: CCCAGGATAGCTCAGCTCATCCAGGACCTGGGCTTCGAAGCGTCAGTCATGGAGGACAACACAGTCTCTGAAGGTGACATCGAACTGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS TCA 90 bp CCTCACCCAGGGTCACGACTGTGGCTTCTGTGGCTTGGAGTGACATaGGTTTTGCAAGGGCTTCTGAAGTTTTGCTCTTGGCCACGTGTT +
Preference number: 5 (lower is better)
Translates to: PHPGSRLWLLWLGVT*VLQGLLKFCSWPRV
Trigger: AACACGTGGCCAAGAGCAAAACTTCAGAAGCCCTTGCAAAACTCATGTCACTCCAAGCCACAGAAGCCACAGTCGTGACCCTGGGTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS-3UTR CAA 90 bp AGGGCAGGCAGTTCCAGTACCAAGGATGCCAGCTACACCAGGCAGAGAACAGACTGTTCCAGGGACACCTaGATGTTCACAATGCCTTTC +
Preference number: 5 (lower is better)
Translates to: RAGSSSTKDASYTRQRTDCSRDT*MFTMPF
Trigger: GAAAGGCATTGTGAACATCAAGGTGTCCCTGGAACA...GTCTGTTCTCTGCCTGGTGTAGCTGGCATCCTTGGTACTGGAACTGCCTGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CAA 90 bp AGGGCAGGCAGTTCCAGTACCAAGGATGCCAGCTACACCAGGCAGAGAACAGACTTGCTTAGGGAGACTTaGATTCTCACAACCCCTTGC +
Preference number: 5 (lower is better)
Translates to: RAGSSSTKDASYTRQRTDLLRET*ILTTPC
Trigger: GCAAGGGGTTGTGAGAATCAAAGTCTCCCTAAGCAA...GTCTGTTCTCTGCCTGGTGTAGCTGGCATCCTTGGTACTGGAACTGCCTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CAA 90 bp GAGTTCCTGGGAAGACACCGAGGCCCTCGGACCCTGTTTTCTTGTTTTCAGTCGCCTGAGGTCTTCGGGTaGAATGAGGTAAGGCTGATA +
Preference number: 5 (lower is better)
Translates to: EFLGRHRGPRTLFSCFQSPEVFG*NEVRLI
Trigger: TATCAGCCTTACCTCATTCAACCCGAAGACCTCAGG...CGACTGAAAACAAGAAAACAGGGTCCGAGGGCCTCGGTGTCTTCCCAGGAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CAA 90 bp AAGGCTAGCAGGATGCTCAGGTCTCACCATGAGCTTCGTCCATCCCACAGTGGCCAAAGAGATGGATGTTaGCTGCACACCTTTCCTCTG +
Preference number: 5 (lower is better)
Translates to: KASRMLRSHHELRPSHSGQRDGC*LHTFPL
Trigger: CAGAGGAAAGGTGTGCAGCAAACATCCATCTCTTTG...GCCACTGTGGGATGGACGAAGCTCATGGTGAGACCTGAGCATCCTGCTAGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CAA 90 bp GAAGATAGAGGGCAGGCAGTTCCAGTACCAAGGATGCCAGCTACACCAGGCAGAGTCGGGAGCCATTTTTaGCACAGACCCTGCTATATC +
Preference number: 5 (lower is better)
Translates to: EDRGQAVPVPRMPATPGRVGSHF*HRPCYI
Trigger: GATATAGCAGGGTCTGTGCAAAAAATGGCTCCCGAC...TCTGCCTGGTGTAGCTGGCATCCTTGGTACTGGAACTGCCTGCCCTCTATCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CAA 90 bp GCAGTTCCAGTACCAAGGATGCCAGCTACACCAGGCAGAGAACAGACTCGTCTGAGCTTGGACTCTATGTaGTGGACACAGGAAGCACAG +
Preference number: 5 (lower is better)
Translates to: AVPVPRMPATPGREQTRLSLDSM*WTQEAQ
Trigger: CTGTGCTTCCTGTGTCCACAACATAGAGTCCAAGCT...CAGACGAGTCTGTTCTCTGCCTGGTGTAGCTGGCATCCTTGGTACTGGAACTGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CAA 90 bp GACAGGGGTGTGCCCTTATGCATACACCTCCCAGGGAACAGTGCTTTATACACTAGTCCTGGGATGATGTaGTGGTCCAGGACCATCGTC +
Preference number: 5 (lower is better)
Translates to: DRGVPLCIHLPGNSALYTSPGMM*WSRTIV
Trigger: GACGATGGTCCTGGACCACAACATCATCCCAGGACT...AGTGTATAAAGCACTGTTCCCTGGGAGGTGTATGCATAAGGGCACACCCCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CAA 90 bp ACGGCCCATGTGTGCTGCCTAACTCCAGGTGTTATGGGAGCTCTTAGTATAGGAGCTGAATGGGAGCCTTaGACATCTGGGCCTCTTCCA +
Preference number: 5 (lower is better)
Translates to: TAHVCCLTPGVMGALSIGAEWEP*TSGPLP
Trigger: TGGAAGAGGCCCAGATGTCAAAGGCTCCCATTCAGC...TCCTATACTAAGAGCTCCCATAACACCTGGAGTTAGGCAGCACACATGGGCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS TCA 90 bp ACACCATCAATGGCCACCAGGATGGCCGTCTGTCCTTTCATCTCGTaGTCTGTCATGGCGTCACTGATGTCACTGGAGATGGTTAAACCG +
Preference number: 5 (lower is better)
Translates to: TPSMATRMAVCPFIS*SVMASLMSLEMVKP
Trigger: CGGTTTAACCATCTCCAGTGACATCAGTGACGCCATGACAGATCACGAGATGAAAGGACAGACGGCCATCCTGGTGGCCATTGATGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS-3UTR CAA 90 bp GACAGGGGTGTGCCCTTATGCATACACCTCCCAGGGAACAGTGCTTTATACACTGATTCTCACAACCCCTaGCAGTTTCCGGATCTTGCC +
Preference number: 5 (lower is better)
Translates to: DRGVPLCIHLPGNSALYTDSHNP*QFPDLA
Trigger: GGCAAGATCCGGAAACTGCAAGGGGTTGTGAGAATC...AGTGTATAAAGCACTGTTCCCTGGGAGGTGTATGCATAAGGGCACACCCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CAA 90 bp AAGGCTAGCAGGATGCTCAGGTCTCACCATGAGCTTCGTCCATCCCACAGTGGCAGGGTCATACTGTATTaGGGCGGTTTTGTTCTCCAA +
Preference number: 5 (lower is better)
Translates to: KASRMLRSHHELRPSHSGRVILY*GGFVLQ
Trigger: TTGGAGAACAAAACCGCCCAAATACAGTATGACCCT...GCCACTGTGGGATGGACGAAGCTCATGGTGAGACCTGAGCATCCTGCTAGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CAA 90 bp AGGGCAGGCAGTTCCAGTACCAAGGATGCCAGCTACACCAGGCAGAGAACAGACTTTGTCCTTGTGAGCTaGGACTCTATGTTGTGGACA +
Preference number: 5 (lower is better)
Translates to: RAGSSSTKDASYTRQRTDFVLVS*DSMLWT
Trigger: TGTCCACAACATAGAGTCCAAGCTCACAAGGACAAA...GTCTGTTCTCTGCCTGGTGTAGCTGGCATCCTTGGTACTGGAACTGCCTGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CAA 90 bp GAGTTCCTGGGAAGACACCGAGGCCCTCGGACCCTGTTTTCTTGTTTTCAGTCGCAATCTGAGCCAAAGTaGTGTCATTACCCACATGGG +
Preference number: 5 (lower is better)
Translates to: EFLGRHRGPRTLFSCFQSQSEPK*CHYPHG
Trigger: CCCATGTGGGTAATGACACAACTTTGGCTCAGATTG...CGACTGAAAACAAGAAAACAGGGTCCGAGGGCCTCGGTGTCTTCCCAGGAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CAA 90 bp GAAGATAGAGGGCAGGCAGTTCCAGTACCAAGGATGCCAGCTACACCAGGCAGAATAACGGTCTTTATCTaGTGTGCCATCTCCAGAGGC +
Preference number: 5 (lower is better)
Translates to: EDRGQAVPVPRMPATPGRITVFI*CAISRG
Trigger: GCCTCTGGAGATGGCACACAAGATAAAGACCGTTAT...TCTGCCTGGTGTAGCTGGCATCCTTGGTACTGGAACTGCCTGCCCTCTATCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS TCA 90 bp ACCTCTGTCTGCGAGATGTGCTTGCTAGGGCTAGGAAAGTACTTCTaGACCACACCGAAATCGACAAAGCCAATGACGATCCACACCACC +
Preference number: 5 (lower is better)
Translates to: TSVCEMCLLGLGKYF*TTPKSTKPMTIHTT
Trigger: GGTGGTGTGGATCGTCATTGGCTTTGTCGATTTCGGTGTGGTTCAGAAGTACTTTCCTAGCCCTAGCAAGCACATCTCGCAGACAGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS TCA 90 bp TCTTGGAGAGATGAATGCTGGCCACGACGTCCAATAAGTCATTTCTaGTCAGGACCACGTCTGCTGCTTCGATGGCAACATCTGTGCCAG +
Preference number: 5 (lower is better)
Translates to: SWRDECWPRRPISHF*SGPRLLLRWQHLCQ
Trigger: CTGGCACAGATGTTGCCATCGAAGCAGCAGACGTGGTCCTGATCAGAAATGACTTATTGGACGTCGTGGCCAGCATTCATCTCTCCAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS GCA 90 bp AGAGACACTTTAAAGTGCCCAGGTGGTAGTGCCTCGATGGCTGTCTaGAGGAACATGGGGGTGACACAAGAAGGGTCATACTGTATTTGG +
Preference number: 5 (lower is better)
Translates to: RDTLKCPGGSASMAV*RNMGVTQEGSYCIW
Trigger: CCAAATACAGTATGACCCTTCTTGTGTCACCCCCATGTTCCTGCAGACAGCCATCGAGGCACTACCACCTGGGCACTTTAAAGTGTCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS CCA 90 bp CCCGACATCAAGGCGACCAACACTGAGAGAATACCAGCATGTCTCTaGAGACTCCTTTCTATGTTAGACACACAGGACGCACAGGTCATG +
Preference number: 5 (lower is better)
Translates to: PDIKATNTERIPACL*RLLSMLDTQDAQVM
Trigger: CATGACCTGTGCGTCCTGTGTGTCTAACATAGAAAGGAGTCTCCAGAGACATGCTGGTATTCTCTCAGTGTTGGTCGCCTTGATGTCGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS-3UTR CAA 90 bp CAAGCAGGGTGTGATCTCGCCCTCATGAAAAGCAGGAATGGTATACTTTCCCCATGCAGTTTCCGGATCTaGCCCTCGATAGAGCTGACA +
Preference number: 5 (lower is better)
Translates to: QAGCDLALMKSRNGILSPCSFRI*PSIELT
Trigger: TGTCAGCTCTATCGAGGGCAAGATCCGGAAACTGCA...TGGGGAAAGTATACCATTCCTGCTTTTCATGAGGGCGAGATCACACCCTGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CAA 90 bp GCAGTTCCAGTACCAAGGATGCCAGCTACACCAGGCAGAGAACAGACTCGTCTGTATATCACCCATGGTTaGTGGCACAGAATTCCCAGA +
Preference number: 5 (lower is better)
Translates to: AVPVPRMPATPGREQTRLYITHG*WHRIPR
Trigger: TCTGGGAATTCTGTGCCACAAACCATGGGTGATATA...CAGACGAGTCTGTTCTCTGCCTGGTGTAGCTGGCATCCTTGGTACTGGAACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CAA 90 bp GACAGGGGTGTGCCCTTATGCATACACCTCCCAGGGAACAGTGCTTTATACACTGCACAGGTCATGCCTTaGATCTGTACGAAGCACTTC +
Preference number: 5 (lower is better)
Translates to: DRGVPLCIHLPGNSALYTAQVMP*ICTKHF
Trigger: GAAGTGCTTCGTACAGATCAAAGGCATGACCTGTGC...AGTGTATAAAGCACTGTTCCCTGGGAGGTGTATGCATAAGGGCACACCCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CAA 90 bp GACAGGGGTGTGCCCTTATGCATACACCTCCCAGGGAACAGTGCTTTATACACTCAGCGATTTGTAGGCTaGTACGTAGAAGTACCACCC +
Preference number: 5 (lower is better)
Translates to: DRGVPLCIHLPGNSALYTQRFVG*YVEVPP
Trigger: GGGTGGTACTTCTACGTACAAGCCTACAAATCGCTG...AGTGTATAAAGCACTGTTCCCTGGGAGGTGTATGCATAAGGGCACACCCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CAA 90 bp ACGGCCCATGTGTGCTGCCTAACTCCAGGTGTTATGGGAGCTCTTAGTATAGGATCATCAGCCATGGTATaGCCTTCGAGGACTTTCCCA +
Preference number: 5 (lower is better)
Translates to: TAHVCCLTPGVMGALSIGSSAMV*PSRTFP
Trigger: TGGGAAAGTCCTCGAAGGCAATACCATGGCTGATGA...TCCTATACTAAGAGCTCCCATAACACCTGGAGTTAGGCAGCACACATGGGCCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CAA 90 bp GACAGGGGTGTGCCCTTATGCATACACCTCCCAGGGAACAGTGCTTTATACACTGTCCCAAGTTCCTCTTaGCAGTATTTAGTGACGGCC +
Preference number: 5 (lower is better)
Translates to: DRGVPLCIHLPGNSALYTVPSSS*QYLVTA
Trigger: GGCCGTCACTAAATACTGCAAAGAGGAACTTGGGAC...AGTGTATAAAGCACTGTTCCCTGGGAGGTGTATGCATAAGGGCACACCCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS-3UTR CAA 90 bp ACGGCCCATGTGTGCTGCCTAACTCCAGGTGTTATGGGAGCTCTTAGTATAGGACCACCCACCCAGAAATaGGACAAAGGTACACAAGAT +
Preference number: 5 (lower is better)
Translates to: TAHVCCLTPGVMGALSIGPPTQK*DKGTQD
Trigger: ATCTTGTGTACCTTTGTCCAATTTCTGGGTGGGTGG...TCCTATACTAAGAGCTCCCATAACACCTGGAGTTAGGCAGCACACATGGGCCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS CCA 90 bp TCTTCCACTGTTTTATTTCCGTCTTGTGGTCCAAGTGATGGGCGTTaGGGTTTCTCTGGGCCAGGGAAGCATGAAAGCCAATTTCCTCAA +
Preference number: 5 (lower is better)
Translates to: SSTVLFPSCGPSDGR*GFSGPGKHESQFPQ
Trigger: TTGAGGAAATTGGCTTTCATGCTTCCCTGGCCCAGAGAAACCCCAACGCCCATCACTTGGACCACAAGACGGAAATAAAACAGTGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS CCA 90 bp ATTAAGTTGTCCTCACCCAGGGTCACGACTGTGGCTTCTGTGGCTTaGAGTGACATGAGTTTTGCAAGGGCTTCTGAAGTTTTGCTCTTG +
Preference number: 5 (lower is better)
Translates to: IKLSSPRVTTVASVA*SDMSFARASEVLLL
Trigger: CAAGAGCAAAACTTCAGAAGCCCTTGCAAAACTCATGTCACTCCAAGCCACAGAAGCCACAGTCGTGACCCTGGGTGAGGACAACTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS-3UTR CAA 90 bp GAGTTCCTGGGAAGACACCGAGGCCCTCGGACCCTGTTTTCTTGTTTTCAGTCGACAGAATTCCCAGATTaGAAGTTTCTGACAGGGTTA +
Preference number: 5 (lower is better)
Translates to: EFLGRHRGPRTLFSCFQSTEFPD*KFLTGL
Trigger: TAACCCTGTCAGAAACTTCAAATCTGGGAATTCTGT...CGACTGAAAACAAGAAAACAGGGTCCGAGGGCCTCGGTGTCTTCCCAGGAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS TCA 90 bp ATGGGAGCCTTTGACATCTGGGCCTCTTCCACCAACTTTACAATCTaGGCCAAAGTTGTGTCATTACCCACATGGGTAGCTTTAAGGAGC +
Preference number: 5 (lower is better)
Translates to: MGAFDIWASSTNFTI*AKVVSLPTWVALRS
Trigger: GCTCCTTAAAGCTACCCATGTGGGTAATGACACAACTTTGGCTCAGATTGTAAAGTTGGTGGAAGAGGCCCAGATGTCAAAGGCTCCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS-3UTR CAA 90 bp CAAGCAGGGTGTGATCTCGCCCTCATGAAAAGCAGGAATGGTATACTTTCCCCAATTTCCTCAATGATCTaGATGATGTCACGGGGACCA +
Preference number: 5 (lower is better)
Translates to: QAGCDLALMKSRNGILSPISSMI*MMSRGP
Trigger: TGGTCCCCGTGACATCATCAAGATCATTGAGGAAAT...TGGGGAAAGTATACCATTCCTGCTTTTCATGAGGGCGAGATCACACCCTGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS TCA 90 bp GAAATCGACAAAGCCAATGACGATCCACACCACCAGGGTCAAGGTTaGAATGATGATGATGAATGGGACAAAATATCCACTGAACCGGTC +
Preference number: 5 (lower is better)
Translates to: EIDKANDDPHHQGQG*NDDDEWDKISTEPV
Trigger: GACCGGTTCAGTGGATATTTTGTCCCATTCATCATCATCATTTCAACCTTGACCCTGGTGGTGTGGATCGTCATTGGCTTTGTCGATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS TCA 72 bp AATCCCGACGCCGGTCATCCATGCCAATGTGCACGCTaGCTTGGGAGGCACTCAGGGGCTTCATGCGGCCGT +
Preference number: 6 (lower is better)
Translates to: NPDAGHPCQCAR*LGRHSGASCGR
Trigger: ACGGCCGCATGAAGCCCCTGAGTGCCTCCCAAGTCAGCGTGCACATTGGCATGGATGACCGGCGTCGGGATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS GCA 72 bp GGAGGACCTGGAAGGCCAGGAGGCGGCCTTTCCCTCTaGAGCGCTGGCCTCAAAGCCCATATCCTCAATCTG +
Preference number: 6 (lower is better)
Translates to: GGPGRPGGGLSL*SAGLKAHILNL
Trigger: CAGATTGAGGATATGGGCTTTGAGGCCAGCGCTGCAGAGGGAAAGGCCGCCTCCTGGCCTTCCAGGTCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS CCA 72 bp GCACGGAGAAGGTCTGGGGACCTGCACCTTCCCCTGTaGGAGGGTTGCCAACTCCAACAGGGTGAGCAGTCA +
Preference number: 6 (lower is better)
Translates to: ARRRSGDLHLPL*EGCQLQQGEQS
Trigger: TGACTGCTCACCCTGTTGGAGTTGGCAACCCTCCCACAGGGGAAGGTGCAGGTCCCCAGACCTTCTCCGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS CCA 72 bp CTGACTTGGGAGGCACTCAGGGGCTTCATGCGGCCGTaGGCCTGGGCCTCATATCTCTCTAGGTCGGGCTTT +
Preference number: 6 (lower is better)
Translates to: LTWEALRGFMRP*AWASYLSRSGF
Trigger: AAAGCCCGACCTAGAGAGATATGAGGCCCAGGCCCACGGCCGCATGAAGCCCCTGAGTGCCTCCCAAGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS CAA 72 bp TGCTCTTCATCCCTGTCACTCAGGAGCAGGGACCATTaGTCGCCACCGTCCTCTGCTGCCCCGCCATGCCGA +
Preference number: 6 (lower is better)
Translates to: CSSSLSLRSRDH*SPPSSAAPPCR
Trigger: TCGGCATGGCGGGGCAGCAGAGGACGGTGGCGACAAATGGTCCCTGCTCCTGAGTGACAGGGATGAAGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS GCA 72 bp AGGTCTGGGGACCTGCACCTTCCCCTGTGGGAGGGTTaGCAACTCCAACAGGGTGAGCAGTCAGATCACTGC +
Preference number: 6 (lower is better)
Translates to: RSGDLHLPLWEG*QLQQGEQSDHC
Trigger: GCAGTGATCTGACTGCTCACCCTGTTGGAGTTGGCAACCCTCCCACAGGGGAAGGTGCAGGTCCCCAGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS GCA 72 bp CCGGTTTCCAATCAGCACGGAGAAGGTCTGGGGACCTaGACCTTCCCCTGTGGGAGGGTTGCCAACTCCAAC +
Preference number: 6 (lower is better)
Translates to: PVSNQHGEGLGT*TFPCGRVANSN
Trigger: GTTGGAGTTGGCAACCCTCCCACAGGGGAAGGTGCAGGTCCCCAGACCTTCTCCGTGCTGATTGGAAACCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS GCA 72 bp CTGGGAGAATCCCGACGCCGGTCATCCATGCCAATGTaGACGCTGACTTGGGAGGCACTCAGGGGCTTCATG +
Preference number: 6 (lower is better)
Translates to: LGESRRRSSMPM*TLTWEALRGFM
Trigger: CATGAAGCCCCTGAGTGCCTCCCAAGTCAGCGTGCACATTGGCATGGATGACCGGCGTCGGGATTCTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS GCA 72 bp GACCATTTGTCGCCACCGTCCTCTGCTGCCCCGCCATaGCGAGACAATCTGTCTGACGTCAGGGAGGACAGA +
Preference number: 6 (lower is better)
Translates to: DHLSPPSSAAPP*RDNLSDVREDR
Trigger: TCTGTCCTCCCTGACGTCAGACAGATTGTCTCGGCATGGCGGGGCAGCAGAGGACGGTGGCGACAAATGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS CCA 72 bp CAGGGGCAGGCGATGCACAGCACAGTGATGGACGTCTaGAAGGCAAAGCGGATGATCACCTCTGTCTGCGAG +
Preference number: 6 (lower is better)
Translates to: QGQAMHSTVMDV*KAKRMITSVCE
Trigger: CTCGCAGACAGAGGTGATCATCCGCTTTGCCTTCCAGACGTCCATCACTGTGCTGTGCATCGCCTGCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS CCA 72 bp TCCAGAGGCTTCCCTCCTTTGATTAGGACACCGTTCTaGGCAGCCACCCCAGTGCCCACCATGACTGCTGTG +
Preference number: 6 (lower is better)
Translates to: SRGFPPLIRTPF*AATPVPTMTAV
Trigger: CACAGCAGTCATGGTGGGCACTGGGGTGGCTGCCCAGAACGGTGTCCTAATCAAAGGAGGGAAGCCTCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS CCA 72 bp ATCCATTCCCGGTTTCCAATCAGCACGGAGAAGGTCTaGGGACCTGCACCTTCCCCTGTGGGAGGGTTGCCA +
Preference number: 6 (lower is better)
Translates to: IHSRFPISTEKV*GPAPSPVGGLP
Trigger: TGGCAACCCTCCCACAGGGGAAGGTGCAGGTCCCCAGACCTTCTCCGTGCTGATTGGAAACCGGGAATGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS CCA 72 bp GCATGTAGTGCATGCCGTCTATTCTTAGTGGGAGGGTaGCCAGGTAGCTCCCCTGGTGCCCCAGGGTCTCAA +
Preference number: 6 (lower is better)
Translates to: ACSACRLFLVGG*PGSSPGAPGSQ
Trigger: TTGAGACCCTGGGGCACCAGGGGAGCTACCTGGCCACCCTCCCACTAAGAATAGACGGCATGCACTACATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110738.3
CDS CAA 90 bp TCAGCCATGGTATTGCCTTCGAGGACTTTCCCATCCACTGGGAACTaGCCCCCAGGGACAACCTTGATGACGTCGCCTCGCTGCACCAGC +
Preference number: 6 (lower is better)
Translates to: SAMVLPSRTFPSTGN*PPGTTLMTSPRCTS
Trigger: GCTGGTGCAGCGAGGCGACGTCATCAAGGTTGTCCCTGGGGGCAAGTTCCCAGTGGATGGGAAAGTCCTCGAAGGCAATACCATGGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS CAA 90 bp AGTCCTGCCCGGGCCCTGCTCCTGGTGTCTCTGGGAGGAGCCACTTaGGGGCTCATTCTCCTCTACTCCATCGGGAAGAGACACTTTAAA +
Preference number: 6 (lower is better)
Translates to: SPARALLLVSLGGAT*GLILLYSIGKRHFK
Trigger: TTTAAAGTGTCTCTTCCCGATGGAGTAGAGGAGAATGAGCCCCAAAGTGGCTCCTCCCAGAGACACCAGGAGCAGGGCCCGGGCAGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS TCA 72 bp TTCCGGATCTTGCCCTCGATAGAGCTGACACAGGACTaGCAGGTCATGCCCTCTACCCGGAGCTTGACCACC +
Preference number: 6 (lower is better)
Translates to: FRILPSIELTQD*QVMPSTRSLTT
Trigger: GGTGGTCAAGCTCCGGGTAGAGGGCATGACCTGTCAGTCCTGTGTCAGCTCTATCGAGGGCAAGATCCGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS TCA 72 bp GGGAGTAGGCATAGGCAATGGTTGTGGCGAGCACGATaGGTACGTCCATGTTGGCGGACCTGTGTCTCAGCG +
Preference number: 6 (lower is better)
Translates to: GSRHRQWLWRAR*VRPCWRTCVSA
Trigger: CGCTGAGACACAGGTCCGCCAACATGGACGTACTCATCGTGCTCGCCACAACCATTGCCTATGCCTACTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS GCA 72 bp ACAAGTCATGCCCAGGATGTTAACCACATCAGTGGCTaGTGGGGACGAGCTGGTGCTGTCCAGACCCCCTTC +
Preference number: 6 (lower is better)
Translates to: TSHAQDVNHISG*WGRAGAVQTPF
Trigger: GAAGGGGGTCTGGACAGCACCAGCTCGTCCCCAGCAGCCACTGATGTGGTTAACATCCTGGGCATGACTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS CCA 72 bp AGTCATGCCCAGGATGTTAACCACATCAGTGGCTGCTaGGGACGAGCTGGTGCTGTCCAGACCCCCTTCGTA +
Preference number: 6 (lower is better)
Translates to: SHAQDVNHISGC*GRAGAVQTPFV
Trigger: TACGAAGGGGGTCTGGACAGCACCAGCTCGTCCCCAGCAGCCACTGATGTGGTTAACATCCTGGGCATGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS CCA 72 bp TGGAAGGCCAGGAGGCGGCCTTTCCCTCTGCAGCGCTaGCCTCAAAGCCCATATCCTCAATCTGAAGGCAAA +
Preference number: 6 (lower is better)
Translates to: WKARRRPFPLQR*PQSPYPQSEGK
Trigger: TTTGCCTTCAGATTGAGGATATGGGCTTTGAGGCCAGCGCTGCAGAGGGAAAGGCCGCCTCCTGGCCTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS CAA 72 bp GTATTGCCTTCGAGGACTTTCCCATCCACTGGGAACTaGCCCCCAGGGACAACCTTGATGACGTCGCCTCGC +
Preference number: 6 (lower is better)
Translates to: VLPSRTFPSTGN*PPGTTLMTSPR
Trigger: GCGAGGCGACGTCATCAAGGTTGTCCCTGGGGGCAAGTTCCCAGTGGATGGGAAAGTCCTCGAAGGCAATAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS CAA 72 bp TCACTGCGAGCCAGGATGCCCTCCACGTTGCTAACTTaGCAGCTAATTCCACAGCCGGGCACTGCCTGGAAG +
Preference number: 6 (lower is better)
Translates to: SLRARMPSTLLT*QLIPQPGTAWK
Trigger: CTTCCAGGCAGTGCCCGGCTGTGGAATTAGCTGCAAAGTTAGCAACGTGGAGGGCATCCTGGCTCGCAGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS TCA 72 bp ATGACTGACGCTTCGAAGCCCAGGTCCTGGATGAGCTaGGCTATCCTGGGCGACTGGATGATCTCCGGATCA +
Preference number: 6 (lower is better)
Translates to: MTDASKPRSWMS*AILGDWMISGS
Trigger: TGATCCGGAGATCATCCAGTCGCCCAGGATAGCTCAGCTCATCCAGGACCTGGGCTTCGAAGCGTCAGTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS CCA 72 bp ATTTACAGTGCATGCCGTCTATTCTTAGTGGGAGGGTaGCCAGGTAGCTCCCCTGGTGCCCCAGGGTCTCAA +
Preference number: 6 (lower is better)
Translates to: IYSACRLFLVGG*PGSSPGAPGSQ
Trigger: TTGAGACCCTGGGGCACCAGGGGAGCTACCTGGCCACCCTCCCACTAAGAATAGACGGCATGCACTGTAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS CCA 72 bp CTAACTTTGCAGCTAATTCCACAGCCGGGCACTGCCTaGAAGTCTGTGCTGTATCCCAGGGTCTCCGTCCCA +
Preference number: 6 (lower is better)
Translates to: LTLQLIPQPGTA*KSVLYPRVSVP
Trigger: TGGGACGGAGACCCTGGGATACAGCACAGACTTCCAGGCAGTGCCCGGCTGTGGAATTAGCTGCAAAGTTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS CAA 72 bp CGTAGCCAACATTGTCGAAGGCGAAGCTCTGCTTCATaGATTGCTCCCAGGGCCGGCCGGGCAAAGCAAGTT +
Preference number: 6 (lower is better)
Translates to: RSQHCRRRSSAS*IAPRAGRAKQV
Trigger: AACTTGCTTTGCCCGGCCGGCCCTGGGAGCAATCAATGAAGCAGAGCTTCGCCTTCGACAATGTTGGCTACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS CAA 72 bp GTGCTGTATCCCAGGGTCTCCGTCCCAAGTTCCTCTTaGCAGTATTTAGTGACGGCCACGCCTAAGGGGTGC +
Preference number: 6 (lower is better)
Translates to: VLYPRVSVPSSS*QYLVTATPKGC
Trigger: GCACCCCTTAGGCGTGGCCGTCACTAAATACTGCAAAGAGGAACTTGGGACGGAGACCCTGGGATACAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS TCA 72 bp GTAGCCAACATTGTCGAAGGCGAAGCTCTGCTTCATTaGTTGCTCCCAGGGCCGGCCGGGCAAAGCAAGTTT +
Preference number: 6 (lower is better)
Translates to: VANIVEGEALLH*LLPGPAGQSKF
Trigger: AAACTTGCTTTGCCCGGCCGGCCCTGGGAGCAATCAATGAAGCAGAGCTTCGCCTTCGACAATGTTGGCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS TCA 72 bp GATGTCACCTTCAGAGACTGTGTTGTCCTCCATGACTaGCGCTTCGAAGCCCAGGTCCTGGATGAGCTGAGC +
Preference number: 6 (lower is better)
Translates to: DVTFRDCVVLHD*RFEAQVLDELS
Trigger: GCTCAGCTCATCCAGGACCTGGGCTTCGAAGCGTCAGTCATGGAGGACAACACAGTCTCTGAAGGTGACATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS TCA 72 bp TTATCTTGTGTGCCATCTCCAGAGGCTTCCCTCCTTTaGTTAGGACACCGTTCTGGGCAGCCACCCCAGTGC +
Preference number: 6 (lower is better)
Translates to: LSCVPSPEASLL*LGHRSGQPPQC
Trigger: GCACTGGGGTGGCTGCCCAGAACGGTGTCCTAATCAAAGGAGGGAAGCCTCTGGAGATGGCACACAAGATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS GCA 72 bp GTTGCTAACTTTGCAGCTAATTCCACAGCCGGGCACTaGCTGGAAGTCTGTGCTGTATCCCAGGGTCTCCGT +
Preference number: 6 (lower is better)
Translates to: VANFAANSTAGH*LEVCAVSQGLR
Trigger: ACGGAGACCCTGGGATACAGCACAGACTTCCAGGCAGTGCCCGGCTGTGGAATTAGCTGCAAAGTTAGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS CCA 72 bp AGCCATGGTATTGCCTTCGAGGACTTTCCCATCCACTaGGAACTTGCCCCCAGGGACAACCTTGATGACGTC +
Preference number: 6 (lower is better)
Translates to: SHGIAFEDFPIH*ELAPRDNLDDV
Trigger: GACGTCATCAAGGTTGTCCCTGGGGGCAAGTTCCCAGTGGATGGGAAAGTCCTCGAAGGCAATACCATGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS CCA 72 bp TCATCCCGCAGAGCACACCATCAATGGCCACCAGGATaGCCGTCTGTCCTTTCATCTCGTGATCTGTCATGG +
Preference number: 6 (lower is better)
Translates to: SSRRAHHQWPPG*PSVLSSRDLSW
Trigger: CCATGACAGATCACGAGATGAAAGGACAGACGGCCATCCTGGTGGCCATTGATGGTGTGCTCTGCGGGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS CCA 72 bp CATGCTTTTCAGGGTGTAGATAGCCAGGGCAGCCTCTaGTTTGACAGCATCTGCGATGGCGATCATCCCGCA +
Preference number: 6 (lower is better)
Translates to: HAFQGVDSQGSL*FDSICDGDHPA
Trigger: TGCGGGATGATCGCCATCGCAGATGCTGTCAAACCAGAGGCTGCCCTGGCTATCTACACCCTGAAAAGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS CAA 72 bp GCTATCCTGGGCGACTGGATGATCTCCGGATCATACTaGACCTCTGCCTTTCCCGACATCAAGGCGACCAAC +
Preference number: 6 (lower is better)
Translates to: AILGDWMISGSY*TSAFPDIKATN
Trigger: GTTGGTCGCCTTGATGTCGGGAAAGGCAGAGGTCAAGTATGATCCGGAGATCATCCAGTCGCCCAGGATAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS CAA 90 bp CGGCCGGGCAAAGCAAGTTTAGATAAGATTTTCCGACTGGCCTCTTaGGCTGTGACCTGTCTCTCCTGTTCAGGCATCGTCCCCACAGAC +
Preference number: 6 (lower is better)
Translates to: RPGKASLDKIFRLAS*AVTCLSCSGIVPTD
Trigger: GTCTGTGGGGACGATGCCTGAACAGGAGAGACAGGTCACAGCCAAAGAGGCCAGTCGGAAAATCTTATCTAAACTTGCTTTGCCCGGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS CAA 90 bp ATAACGGTCTTTATCTTGTGTGCCATCTCCAGAGGCTTCCCTCCTTaGATTAGGACACCGTTCTGGGCAGCCACCCCAGTGCCCACCATG +
Preference number: 6 (lower is better)
Translates to: ITVFILCAISRGFPP*IRTPFWAATPVPTM
Trigger: CATGGTGGGCACTGGGGTGGCTGCCCAGAACGGTGTCCTAATCAAAGGAGGGAAGCCTCTGGAGATGGCACACAAGATAAAGACCGTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS TCA 72 bp TCTGCAGCGCTGGCCTCAAAGCCCATATCCTCAATCTaGAGGCAAATCTGCTGCAGGTTCATGACAGACGGC +
Preference number: 6 (lower is better)
Translates to: SAALASKPISSI*RQICCRFMTDG
Trigger: GCCGTCTGTCATGAACCTGCAGCAGATTTGCCTTCAGATTGAGGATATGGGCTTTGAGGCCAGCGCTGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS TCA 72 bp ATGGCCACCAGGATGGCCGTCTGTCCTTTCATCTCGTaGTCTGTCATGGCGTCACTGATGTCACTGGAGATG +
Preference number: 6 (lower is better)
Translates to: MATRMAVCPFIS*SVMASLMSLEM
Trigger: CATCTCCAGTGACATCAGTGACGCCATGACAGATCACGAGATGAAAGGACAGACGGCCATCCTGGTGGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS TCA 72 bp TTGACCCGGATCCTCCGGACGGTCCTCTTGGAGAGATaGATGCTGGCCACGACGTCCAATAAGTCATTTCTG +
Preference number: 6 (lower is better)
Translates to: LTRILRTVLLER*MLATTSNKSFL
Trigger: CAGAAATGACTTATTGGACGTCGTGGCCAGCATTCATCTCTCCAAGAGGACCGTCCGGAGGATCCGGGTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS GCA 72 bp CCAACATTGTCGAAGGCGAAGCTCTGCTTCATTGATTaGTCCCAGGGCCGGCCGGGCAAAGCAAGTTTAGAT +
Preference number: 6 (lower is better)
Translates to: PTLSKAKLCFID*SQGRPGKASLD
Trigger: ATCTAAACTTGCTTTGCCCGGCCGGCCCTGGGAGCAATCAATGAAGCAGAGCTTCGCCTTCGACAATGTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS GCA 72 bp TTCTCCTCTACTCCATCGGGAAGAGACACTTTAAAGTaGCCAGGTGGTAGTGCCTCGATGGCTGTCTGCAGG +
Preference number: 6 (lower is better)
Translates to: FSSTPSGRDTLK*PGGSASMAVCR
Trigger: CCTGCAGACAGCCATCGAGGCACTACCACCTGGGCACTTTAAAGTGTCTCTTCCCGATGGAGTAGAGGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS CAA 72 bp GTGTGTGGGGAGCCCTCTAGTGTCGGGAGCCATTTTTaGCACAGACCCTGCTATATCACCCATGGTTTGTGG +
Preference number: 6 (lower is better)
Translates to: VCGEPSSVGSHF*HRPCYITHGLW
Trigger: CCACAAACCATGGGTGATATAGCAGGGTCTGTGCAAAAAATGGCTCCCGACACTAGAGGGCTCCCCACACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS CAA 72 bp TTTATCTTGTGTGCCATCTCCAGAGGCTTCCCTCCTTaGATTAGGACACCGTTCTGGGCAGCCACCCCAGTG +
Preference number: 6 (lower is better)
Translates to: FILCAISRGFPP*IRTPFWAATPV
Trigger: CACTGGGGTGGCTGCCCAGAACGGTGTCCTAATCAAAGGAGGGAAGCCTCTGGAGATGGCACACAAGATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS TCA 72 bp GTAGTGCCTCGATGGCTGTCTGCAGGAACATGGGGGTaGCACAAGAAGGGTCATACTGTATTTGGGCGGTTT +
Preference number: 6 (lower is better)
Translates to: VVPRWLSAGTWG*HKKGHTVFGRF
Trigger: AAACCGCCCAAATACAGTATGACCCTTCTTGTGTCACCCCCATGTTCCTGCAGACAGCCATCGAGGCACTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS TCA 72 bp ACACCTTTCCTCTGGGACAGCATGTCTTCGATAGGCTaGACAGATGAGGCACAGGTAATGCCGCTGATGGTG +
Preference number: 6 (lower is better)
Translates to: TPFLWDSMSSIG*TDEAQVMPLMV
Trigger: CACCATCAGCGGCATTACCTGTGCCTCATCTGTTCAGCCTATCGAAGACATGCTGTCCCAGAGGAAAGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS TCA 72 bp GACCTCTGCCTTTCCCGACATCAAGGCGACCAACACTaGGAGAATACCAGCATGTCTCTGGAGACTCCTTTC +
Preference number: 6 (lower is better)
Translates to: DLCLSRHQGDQH*ENTSMSLETPF
Trigger: GAAAGGAGTCTCCAGAGACATGCTGGTATTCTCTCAGTGTTGGTCGCCTTGATGTCGGGAAAGGCAGAGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS TCA 72 bp TACTGCTGGGGATTAACATGTAGACCATCAATCCCATaGCGGGGATGCCGAACACCAGGCTGCACAGGAAAG +
Preference number: 6 (lower is better)
Translates to: YCWGLTCRPSIP*RGCRTPGCTGK
Trigger: CTTTCCTGTGCAGCCTGGTGTTCGGCATCCCCGTCATGGGATTGATGGTCTACATGTTAATCCCCAGCAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS GCA 72 bp GACGTCTGGAAGGCAAAGCGGATGATCACCTCTGTCTaGGAGATGTGCTTGCTAGGGCTAGGAAAGTACTTC +
Preference number: 6 (lower is better)
Translates to: DVWKAKRMITSV*EMCLLGLGKYF
Trigger: GAAGTACTTTCCTAGCCCTAGCAAGCACATCTCGCAGACAGAGGTGATCATCCGCTTTGCCTTCCAGACGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS CCA 72 bp TCCTCACCCAGGGTCACGACTGTGGCTTCTGTGGCTTaGAGTGACATGAGTTTTGCAAGGGCTTCTGAAGTT +
Preference number: 6 (lower is better)
Translates to: SSPRVTTVASVA*SDMSFARASEV
Trigger: AACTTCAGAAGCCCTTGCAAAACTCATGTCACTCCAAGCCACAGAAGCCACAGTCGTGACCCTGGGTGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS CAA 90 bp GACGGCACATATCTGACAGTGGCGCTGCCTTGTTCCAGGGACACCTaGATGTTCACAATGCCTTTCAGACTGGAGATCCTGTCCTCAATG +
Preference number: 6 (lower is better)
Translates to: DGTYLTVALPCSRDT*MFTMPFRLEILSSM
Trigger: CATTGAGGACAGGATCTCCAGTCTGAAAGGCATTGTGAACATCAAGGTGTCCCTGGAACAAGGCAGCGCCACTGTCAGATATGTGCCGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS CAA 90 bp CTGCAGGTTCATGACAGACGGCACATATCTGACAGTGGCGCTGCCTaGTTCCAGGGACACCTTGATGTTCACAATGCCTTTCAGACTGGA +
Preference number: 6 (lower is better)
Translates to: LQVHDRRHISDSGAA*FQGHLDVHNAFQTG
Trigger: TCCAGTCTGAAAGGCATTGTGAACATCAAGGTGTCCCTGGAACAAGGCAGCGCCACTGTCAGATATGTGCCGTCTGTCATGAACCTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS CAA 90 bp GTCATCCCTGTGATAATCAGTTCGATGTCACCTTCAGAGACTGTGTaGTCCTCCATGACTGACGCTTCGAAGCCCAGGTCCTGGATGAGC +
Preference number: 6 (lower is better)
Translates to: VIPVIISSMSPSETV*SSMTDASKPRSWMS
Trigger: GCTCATCCAGGACCTGGGCTTCGAAGCGTCAGTCATGGAGGACAACACAGTCTCTGAAGGTGACATCGAACTGATTATCACAGGGATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS CAA 90 bp GTCGTAAAGAACTGCTCCAGTCCCTTCTGCCAAAGAGATGGATGTTaGCTGCACACCTTTCCTCTGGGACAGCATGTAGTGCATGCCGTC +
Preference number: 6 (lower is better)
Translates to: VVKNCSSPFCQRDGC*LHTFPLGQHVVHAV
Trigger: GACGGCATGCACTACATGCTGTCCCAGAGGAAAGGTGTGCAGCAAACATCCATCTCTTTGGCAGAAGGGACTGGAGCAGTTCTTTACGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110738.3
CDS CAA 90 bp GTCGTAAAGAACTGCTCCAGTCCCTTCTGCCAAAGAGATGGATGTTaGCTGCACACCTTTCCTCTGGGACAGCATGTCTTCGATAGGCTG +
Preference number: 6 (lower is better)
Translates to: VVKNCSSPFCQRDGC*LHTFPLGQHVFDRL
Trigger: CAGCCTATCGAAGACATGCTGTCCCAGAGGAAAGGTGTGCAGCAAACATCCATCTCTTTGGCAGAAGGGACTGGAGCAGTTCTTTACGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS TCA 72 bp TTCTTCCACTGTTTTATTTCCGTCTTGTGGTCCAAGTaGTGGGCGTTGGGGTTTCTCTGGGCCAGGGAAGCA +
Preference number: 6 (lower is better)
Translates to: FFHCFISVLWSK*WALGFLWAREA
Trigger: TGCTTCCCTGGCCCAGAGAAACCCCAACGCCCATCACTTGGACCACAAGACGGAAATAAAACAGTGGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS TCA 72 bp GGGTCACGACTGTGGCTTCTGTGGCTTGGAGTGACATaGGTTTTGCAAGGGCTTCTGAAGTTTTGCTCTTGG +
Preference number: 6 (lower is better)
Translates to: GSRLWLLWLGVT*VLQGLLKFCSW
Trigger: CCAAGAGCAAAACTTCAGAAGCCCTTGCAAAACTCATGTCACTCCAAGCCACAGAAGCCACAGTCGTGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS TCA 72 bp CCTCATATCTCTCTAGGTCGGGCTTTCTATAGCACTTaGGCTGAAGAGACGAGAGCACCACAGAGACAGAGG +
Preference number: 6 (lower is better)
Translates to: PHISLGRAFYST*AEETRAPQRQR
Trigger: CCTCTGTCTCTGTGGTGCTCTCGTCTCTTCAGCTCAAGTGCTATAGAAAGCCCGACCTAGAGAGATATGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS CCA 72 bp GTTTTATTTCCGTCTTGTGGTCCAAGTGATGGGCGTTaGGGTTTCTCTGGGCCAGGGAAGCATGAAAGCCAA +
Preference number: 6 (lower is better)
Translates to: VLFPSCGPSDGR*GFSGPGKHESQ
Trigger: TTGGCTTTCATGCTTCCCTGGCCCAGAGAAACCCCAACGCCCATCACTTGGACCACAAGACGGAAATAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS CAA 72 bp TATCTGACAGTGGCGCTGCCTTGTTCCAGGGACACCTaGATGTTCACAATGCCTTTCAGACTGGAGATCCTG +
Preference number: 6 (lower is better)
Translates to: YLTVALPCSRDT*MFTMPFRLEIL
Trigger: CAGGATCTCCAGTCTGAAAGGCATTGTGAACATCAAGGTGTCCCTGGAACAAGGCAGCGCCACTGTCAGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS CAA 72 bp CATGACAGACGGCACATATCTGACAGTGGCGCTGCCTaGTTCCAGGGACACCTTGATGTTCACAATGCCTTT +
Preference number: 6 (lower is better)
Translates to: HDRRHISDSGAA*FQGHLDVHNAF
Trigger: AAAGGCATTGTGAACATCAAGGTGTCCCTGGAACAAGGCAGCGCCACTGTCAGATATGTGCCGTCTGTCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS CAA 72 bp TCCCATGTCACAGATGTGGTCCCTGAGGTCTTCGGGTaGAATGAGGTAAGGCTGATAGGTAATGACTGCCTC +
Preference number: 6 (lower is better)
Translates to: SHVTDVVPEVFG*NEVRLIGNDCL
Trigger: GAGGCAGTCATTACCTATCAGCCTTACCTCATTCAACCCGAAGACCTCAGGGACCACATCTGTGACATGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS CAA 72 bp CATGTTGGCGGACCTGTGTCTCAGCGATTTGTAGGCTaGTACGTAGAAGTACCACCCACCCAGAAATTGGAC +
Preference number: 6 (lower is better)
Translates to: HVGGPVSQRFVG*YVEVPPTQKLD
Trigger: GTCCAATTTCTGGGTGGGTGGTACTTCTACGTACAAGCCTACAAATCGCTGAGACACAGGTCCGCCAACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS CAA 72 bp AACTGCTCCAGTCCCTTCTGCCAAAGAGATGGATGTTaGCTGCACACCTTTCCTCTGGGACAGCATGTAGTG +
Preference number: 6 (lower is better)
Translates to: NCSSPFCQRDGC*LHTFPLGQHVV
Trigger: CACTACATGCTGTCCCAGAGGAAAGGTGTGCAGCAAACATCCATCTCTTTGGCAGAAGGGACTGGAGCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110738.3
CDS GCA 72 bp TGGTTGCTTAGGGAGACTTTGATTCTCACAACCCCTTaGAGTTTCCGGATCTTGCCCTCGATAGAGCTGACA +
Preference number: 6 (lower is better)
Translates to: WLLRETLILTTP*SFRILPSIELT
Trigger: TGTCAGCTCTATCGAGGGCAAGATCCGGAAACTGCAAGGGGTTGTGAGAATCAAAGTCTCCCTAAGCAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS CAA 90 bp AGCTTCAAATCCCATGTCACAGATGTGGTCCCTGAGGTCTTCGGGTaGAATGAGGTAAGGCTGATAGGTAATGACTGCCTCTTGGTTGCT +
Preference number: 6 (lower is better)
Translates to: SFKSHVTDVVPEVFG*NEVRLIGNDCLLVA
Trigger: AGCAACCAAGAGGCAGTCATTACCTATCAGCCTTACCTCATTCAACCCGAAGACCTCAGGGACCACATCTGTGACATGGGATTTGAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS CAA 90 bp TTGTTGACATCAATTGGTCCCAGCCTTAAGGGAGCTGTTCTGTTCTaGATGGCAGCTTCAAATCCCATGTCACAGATGTGGTCCCTGAGG +
Preference number: 6 (lower is better)
Translates to: LLTSIGPSLKGAVLF*MAASNPMSQMWSLR
Trigger: CCTCAGGGACCACATCTGTGACATGGGATTTGAAGCTGCCATCAAGAACAGAACAGCTCCCTTAAGGCTGGGACCAATTGATGTCAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS TCA 72 bp CAATTGGTCCCAGCCTTAAGGGAGCTGTTCTGTTCTTaGTGGCAGCTTCAAATCCCATGTCACAGATGTGGT +
Preference number: 6 (lower is better)
Translates to: QLVPALRELFCS*WQLQIPCHRCG
Trigger: ACCACATCTGTGACATGGGATTTGAAGCTGCCATCAAGAACAGAACAGCTCCCTTAAGGCTGGGACCAATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS CCA 72 bp AAGGCGACCAACACTGAGAGAATACCAGCATGTCTCTaGAGACTCCTTTCTATGTTAGACACACAGGACGCA +
Preference number: 6 (lower is better)
Translates to: KATNTERIPACL*RLLSMLDTQDA
Trigger: TGCGTCCTGTGTGTCTAACATAGAAAGGAGTCTCCAGAGACATGCTGGTATTCTCTCAGTGTTGGTCGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS CAA 72 bp TCAATTGGTCCCAGCCTTAAGGGAGCTGTTCTGTTCTaGATGGCAGCTTCAAATCCCATGTCACAGATGTGG +
Preference number: 6 (lower is better)
Translates to: SIGPSLKGAVLF*MAASNPMSQMW
Trigger: CCACATCTGTGACATGGGATTTGAAGCTGCCATCAAGAACAGAACAGCTCCCTTAAGGCTGGGACCAATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS CAA 72 bp AAAGCAAGTTTAGATAAGATTTTCCGACTGGCCTCTTaGGCTGTGACCTGTCTCTCCTGTTCAGGCATCGTC +
Preference number: 6 (lower is better)
Translates to: KASLDKIFRLAS*AVTCLSCSGIV
Trigger: GACGATGCCTGAACAGGAGAGACAGGTCACAGCCAAAGAGGCCAGTCGGAAAATCTTATCTAAACTTGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS CAA 72 bp TTGGGCGGTTTTGTTCTCCAAGGACACGTGAATATTTaGAACCCCCGGGAGTTGGCCTATATTTCCTTCAAT +
Preference number: 6 (lower is better)
Translates to: LGGFVLQGHVNI*NPRELAYISFN
Trigger: ATTGAAGGAAATATAGGCCAACTCCCGGGGGTTCAAAATATTCACGTGTCCTTGGAGAACAAAACCGCCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS CAA 72 bp GAACATGGGGGTGACACAAGAAGGGTCATACTGTATTaGGGCGGTTTTGTTCTCCAAGGACACGTGAATATT +
Preference number: 6 (lower is better)
Translates to: EHGGDTRRVILY*GGFVLQGHVNI
Trigger: AATATTCACGTGTCCTTGGAGAACAAAACCGCCCAAATACAGTATGACCCTTCTTGTGTCACCCCCATGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006742.11
CDS CCA 72 bp TTTTTGCACAGACCCTGCTATATCACCCATGGTTTGTaGCACAGAATTCCCAGATTTGAAGTTTCTGACAGG +
Preference number: 6 (lower is better)
Translates to: FLHRPCYITHGL*HRIPRFEVSDR
Trigger: CCTGTCAGAAACTTCAAATCTGGGAATTCTGTGCCACAAACCATGGGTGATATAGCAGGGTCTGTGCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS TCA 72 bp AAAGCCAATGACGATCCACACCACCAGGGTCAAGGTTaGAATGATGATGATGAATGGGACAAAATATCCACT +
Preference number: 6 (lower is better)
Translates to: KANDDPHHQGQG*NDDDEWDKIST
Trigger: AGTGGATATTTTGTCCCATTCATCATCATCATTTCAACCTTGACCCTGGTGGTGTGGATCGTCATTGGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS CAA 90 bp GACCCTGCTATATCACCCATGGTTTGTGGCACAGAATTCCCAGATTaGAAGTTTCTGACAGGGTTAATAGTGAAGGTTTCAGAATTCACA +
Preference number: 6 (lower is better)
Translates to: DPAISPMVCGTEFPD*KFLTGLIVKVSEFT
Trigger: TGTGAATTCTGAAACCTTCACTATTAACCCTGTCAGAAACTTCAAATCTGGGAATTCTGTGCCACAAACCATGGGTGATATAGCAGGGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3
CDS CAA 72 bp ATATCACCCATGGTTTGTGGCACAGAATTCCCAGATTaGAAGTTTCTGACAGGGTTAATAGTGAAGGTTTCA +
Preference number: 6 (lower is better)
Translates to: ISPMVCGTEFPD*KFLTGLIVKVS
Trigger: TGAAACCTTCACTATTAACCCTGTCAGAAACTTCAAATCTGGGAATTCTGTGCCACAAACCATGGGTGATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006742.11
ENSMUST00000110738.3