Pregenerated sensors for ATP6V1H (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033793Ensembl transcript IDs: ENSMUST00000044369.13, ENSMUST00000192029.6, ENSMUST00000192698.3, ENSMUST00000192847.6, ENSMUST00000194676.6
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | ACTGAGGTTCTCACTCCACTGGTCCATGGGAAGTGCAGAAAGGCTGAACAGGTCCCCAGTTGTGCACCATaGGCTTCTGCACGGCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TEVLTPLVHGKCRKAEQVPSCAP*ASARPE Trigger: TTCTGGCCGTGCAGAAGCTCATGGTGCACAACTGGG...GACCTGTTCAGCCTTTCTGCACTTCCCATGGACCAGTGGAGTGAGAACCTCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 ENSMUST00000192847.6 |
||
| CDS-3UTR TCA 90 bp | ACTGAGGTTCTCACTCCACTGGTCCATGGGAAGTGCAGAAAGGCTGAACAGGTCCAAACCGGTACTCATTaGCCCGGAGCATCAGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TEVLTPLVHGKCRKAEQVQTGTH*PGASAA Trigger: TGCAGCTGATGCTCCGGGTCAATGAGTACCGGTTTG...GACCTGTTCAGCCTTTCTGCACTTCCCATGGACCAGTGGAGTGAGAACCTCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 ENSMUST00000192847.6 |
||
| CDS-3UTR TCA 90 bp | ACTGAGGTTCTCACTCCACTGGTCCATGGGAAGTGCAGAAAGGCTGAACAGGTCAGGTGCTCACACATTTaGGGACTGAATGCCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TEVLTPLVHGKCRKAEQVRCSHI*GLNARS Trigger: GCTCCTGGCATTCAGTCCTCAAATGTGTGAGCACCT...GACCTGTTCAGCCTTTCTGCACTTCCCATGGACCAGTGGAGTGAGAACCTCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 ENSMUST00000192847.6 |
||
| CDS-3UTR GCA 90 bp | ACTGAGGTTCTCACTCCACTGGTCCATGGGAAGTGCAGAAAGGCTGAACAGGTCTGCACCATGAGCTTCTaGACGGCCAGAAGAGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: TEVLTPLVHGKCRKAEQVCTMSF*TARRAL Trigger: CAATGCTCTTCTGGCCGTGCAGAAGCTCATGGTGCA...GACCTGTTCAGCCTTTCTGCACTTCCCATGGACCAGTGGAGTGAGAACCTCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 ENSMUST00000192847.6 |
||
| CDS-3UTR CCA 90 bp | ACTGAGGTTCTCACTCCACTGGTCCATGGGAAGTGCAGAAAGGCTGAACAGGTCCATTGGCAGGAAGTATaGCCAGGCAGTGCTCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TEVLTPLVHGKCRKAEQVHWQEV*PGSALA Trigger: AGCAAGAGCACTGCCTGGCCATACTTCCTGCCAATG...GACCTGTTCAGCCTTTCTGCACTTCCCATGGACCAGTGGAGTGAGAACCTCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 ENSMUST00000192847.6 |
||
| CDS-3UTR CCA 90 bp | ACTGAGGTTCTCACTCCACTGGTCCATGGGAAGTGCAGAAAGGCTGAACAGGTCCTGGCGATTCAACATTaGCAGGAAGTATGGCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TEVLTPLVHGKCRKAEQVLAIQH*QEVWPG Trigger: GCCTGGCCATACTTCCTGCCAATGTTGAATCGCCAG...GACCTGTTCAGCCTTTCTGCACTTCCCATGGACCAGTGGAGTGAGAACCTCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 ENSMUST00000192847.6 |
||
| CDS-3UTR GCA 90 bp | ACTGAGGTTCTCACTCCACTGGTCCATGGGAAGTGCAGAAAGGCTGAACAGGTCCAACAGCAACACCGCTaGCACGAAGTTTCTGTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: TEVLTPLVHGKCRKAEQVQQQHR*HEVSVN Trigger: GTTCACAGAAACTTCGTGGCAGCGGTGTTGCTGTTG...GACCTGTTCAGCCTTTCTGCACTTCCCATGGACCAGTGGAGTGAGAACCTCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044369.13 ENSMUST00000192847.6 |
||
| CDS-3UTR CCA 90 bp | ACTGAGGTTCTCACTCCACTGGTCCATGGGAAGTGCAGAAAGGCTGAACAGGTCCGCAATGATGTTAGTTaGGACAGCAGCATCCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: TEVLTPLVHGKCRKAEQVRNDVS*DSSIHS Trigger: GCTGTGGATGCTGCTGTCCCAACTAACATCATTGCG...GACCTGTTCAGCCTTTCTGCACTTCCCATGGACCAGTGGAGTGAGAACCTCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 ENSMUST00000192847.6 |
||
| CDS-3UTR CCA 90 bp | ACTGAGGTTCTCACTCCACTGGTCCATGGGAAGTGCAGAAAGGCTGAACAGGTCGCCAGTTCACTTTGTTaGCACGAACTTCAGCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TEVLTPLVHGKCRKAEQVASSLC*HELQQP Trigger: AGGCTGCTGAAGTTCGTGCCAACAAAGTGAACTGGC...GACCTGTTCAGCCTTTCTGCACTTCCCATGGACCAGTGGAGTGAGAACCTCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 ENSMUST00000192847.6 |
||
| CDS-3UTR CCA 90 bp | ACTGAGGTTCTCACTCCACTGGTCCATGGGAAGTGCAGAAAGGCTGAACAGGTCACCTGCTGGTCTTCATaGTGCATGTGGTTCATCACC | + |
|
Preference number: 4 (lower is better) Translates to: TEVLTPLVHGKCRKAEQVTCWSS*CMWFIT Trigger: GGTGATGAACCACATGCACCATGAAGACCAGCAGGT...GACCTGTTCAGCCTTTCTGCACTTCCCATGGACCAGTGGAGTGAGAACCTCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 ENSMUST00000192847.6 |
||
| CDS-3UTR TCA 90 bp | ACTGAGGTTCTCACTCCACTGGTCCATGGGAAGTGCAGAAAGGCTGAACAGGTCCACACATTTGAGGACTaGATGCCAGGAGCCATATTG | + |
|
Preference number: 4 (lower is better) Translates to: TEVLTPLVHGKCRKAEQVHTFED*MPGAIL Trigger: CAATATGGCTCCTGGCATTCAGTCCTCAAATGTGTG...GACCTGTTCAGCCTTTCTGCACTTCCCATGGACCAGTGGAGTGAGAACCTCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 ENSMUST00000192847.6 |
||
| CDS-3UTR TCA 90 bp | ACTGAGGTTCTCACTCCACTGGTCCATGGGAAGTGCAGAAAGGCTGAACAGGTCACACACTGCACATACTaGGAACTCTGTGAACTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TEVLTPLVHGKCRKAEQVTHCTY*ELCELS Trigger: GCTGAGTTCACAGAGTTCTCAGTATGTGCAGTGTGT...GACCTGTTCAGCCTTTCTGCACTTCCCATGGACCAGTGGAGTGAGAACCTCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192698.3 |
||
| CDS-3UTR GCA 90 bp | ACTGAGGTTCTCACTCCACTGGTCCATGGGAAGTGCAGAAAGGCTGAACAGGTCTGGTTCATCACCAACTaGTTTCCACCAAGCTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TEVLTPLVHGKCRKAEQVWFITN*FPPSCS Trigger: TGAGCAGCTTGGTGGAAAGCAGTTGGTGATGAACCA...GACCTGTTCAGCCTTTCTGCACTTCCCATGGACCAGTGGAGTGAGAACCTCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 ENSMUST00000192847.6 |
||
| CDS-3UTR GCA 90 bp | ACTGAGGTTCTCACTCCACTGGTCCATGGGAAGTGCAGAAAGGCTGAACAGGTCAGATATTCCCAGTTGTaGACCATGAGCTTCTGCACG | + |
|
Preference number: 4 (lower is better) Translates to: TEVLTPLVHGKCRKAEQVRYSQL*TMSFCT Trigger: CGTGCAGAAGCTCATGGTGCACAACTGGGAATATCT...GACCTGTTCAGCCTTTCTGCACTTCCCATGGACCAGTGGAGTGAGAACCTCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 ENSMUST00000192847.6 |
||
| CDS-3UTR CCA 90 bp | ACTGAGGTTCTCACTCCACTGGTCCATGGGAAGTGCAGAAAGGCTGAACAGGTCACAGTAAAGGGATCCTaGCGATTCAACATTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TEVLTPLVHGKCRKAEQVTVKGS*RFNIGR Trigger: CCTGCCAATGTTGAATCGCCAGGATCCCTTTACTGT...GACCTGTTCAGCCTTTCTGCACTTCCCATGGACCAGTGGAGTGAGAACCTCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 ENSMUST00000192847.6 |
||
| CDS-3UTR CCA 90 bp | ACTGAGGTTCTCACTCCACTGGTCCATGGGAAGTGCAGAAAGGCTGAACAGGTCGCCAGAGCATACTCTTaGCGAGTTTCTCTTTCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: TEVLTPLVHGKCRKAEQVARAYS*RVSLSV Trigger: AACGGAAAGAGAAACTCGCCAAGAGTATGCTCTGGC...GACCTGTTCAGCCTTTCTGCACTTCCCATGGACCAGTGGAGTGAGAACCTCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 ENSMUST00000192847.6 |
||
| CDS-3UTR CCA 90 bp | ACTGAGGTTCTCACTCCACTGGTCCATGGGAAGTGCAGAAAGGCTGAACAGGTCGCACTGTCTGTTCTTTaGAGATGTGCGTCATCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: TEVLTPLVHGKCRKAEQVALSVL*RCASSD Trigger: ATCTGATGACGCACATCTCCAAAGAACAGACAGTGC...GACCTGTTCAGCCTTTCTGCACTTCCCATGGACCAGTGGAGTGAGAACCTCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 ENSMUST00000192847.6 |
||
| CDS-3UTR TCA 90 bp | ACTGAGGTTCTCACTCCACTGGTCCATGGGAAGTGCAGAAAGGCTGAACAGGTCAGTCAAAGAAAATGCTaGCACGCTGGTGATTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TEVLTPLVHGKCRKAEQVSQRKC*HAGDFP Trigger: AGGAAAATCACCAGCGTGTCAGCATTTTCTTTGACT...GACCTGTTCAGCCTTTCTGCACTTCCCATGGACCAGTGGAGTGAGAACCTCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 ENSMUST00000192847.6 |
||
| CDS-3UTR TCA 90 bp | ACTGAGGTTCTCACTCCACTGGTCCATGGGAAGTGCAGAAAGGCTGAACAGGTCGCCACGAAGTTTCTGTaGACTCAGCTGAGTTTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: TEVLTPLVHGKCRKAEQVATKFL*TQLSFY Trigger: ATAAAAACTCAGCTGAGTTCACAGAAACTTCGTGGC...GACCTGTTCAGCCTTTCTGCACTTCCCATGGACCAGTGGAGTGAGAACCTCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044369.13 ENSMUST00000192847.6 |
||
| CDS-3UTR TCA 90 bp | ACTGAGGTTCTCACTCCACTGGTCCATGGGAAGTGCAGAAAGGCTGAACAGGTCACTGTATTCATCAAATaGGCTAAGGTCCTGGACACT | + |
|
Preference number: 4 (lower is better) Translates to: TEVLTPLVHGKCRKAEQVTVFIK*AKVLDT Trigger: AGTGTCCAGGACCTTAGCTCATTTGATGAATACAGT...GACCTGTTCAGCCTTTCTGCACTTCCCATGGACCAGTGGAGTGAGAACCTCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 |
||
| CDS-3UTR GCA 90 bp | ACTGAGGTTCTCACTCCACTGGTCCATGGGAAGTGCAGAAAGGCTGAACAGGTCGGCGATAATTCTTGCTaGCATATGAACAGTAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TEVLTPLVHGKCRKAEQVGDNSC*HMNSKG Trigger: CCCTTTACTGTTCATATGGCAGCAAGAATTATCGCC...GACCTGTTCAGCCTTTCTGCACTTCCCATGGACCAGTGGAGTGAGAACCTCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 ENSMUST00000192847.6 |
||
| CDS-3UTR CCA 90 bp | ACTGAGGTTCTCACTCCACTGGTCCATGGGAAGTGCAGAAAGGCTGAACAGGTCGCATATCGTCAACCATaGTTAGTATGTACTGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: TEVLTPLVHGKCRKAEQVAYRQP*LVCTAL Trigger: CAGTGCAGTACATACTAACCATGGTTGACGATATGC...GACCTGTTCAGCCTTTCTGCACTTCCCATGGACCAGTGGAGTGAGAACCTCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 ENSMUST00000192847.6 |
||
| CDS-3UTR CCA 90 bp | ACTGAGGTTCTCACTCCACTGGTCCATGGGAAGTGCAGAAAGGCTGAACAGGTCAATGAGCTAAGGTCCTaGACACTCTCACCAAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TEVLTPLVHGKCRKAEQVNELRS*TLSPSF Trigger: AAAACTTGGTGAGAGTGTCCAGGACCTTAGCTCATT...GACCTGTTCAGCCTTTCTGCACTTCCCATGGACCAGTGGAGTGAGAACCTCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 |
||
| CDS-3UTR TCA 90 bp | ACTGAGGTTCTCACTCCACTGGTCCATGGGAAGTGCAGAAAGGCTGAACAGGTCCTGAGAACTATCACTTaGAGAGATTGTTCCTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TEVLTPLVHGKCRKAEQVLRTIT*RDCSCF Trigger: GAAACAGGAACAATCTCTTCAAGTGATAGTTCTCAG...GACCTGTTCAGCCTTTCTGCACTTCCCATGGACCAGTGGAGTGAGAACCTCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044369.13 ENSMUST00000192847.6 |
||
| CDS-3UTR GCA 90 bp | ACTGAGGTTCTCACTCCACTGGTCCATGGGAAGTGCAGAAAGGCTGAACAGGTCATGGTTAGTATGTACTaGACTGTCTGTTCTTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TEVLTPLVHGKCRKAEQVMVSMY*TVCSLE Trigger: CTCCAAAGAACAGACAGTGCAGTACATACTAACCAT...GACCTGTTCAGCCTTTCTGCACTTCCCATGGACCAGTGGAGTGAGAACCTCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 ENSMUST00000192847.6 |
||
| CDS-3UTR GCA 90 bp | ACTGAGGTTCTCACTCCACTGGTCCATGGGAAGTGCAGAAAGGCTGAACAGGTCTCATCATACTTCTGCTaGTCCAAATTCTCCAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: TEVLTPLVHGKCRKAEQVSSYFC*SKFSNC Trigger: ACAGTTGGAGAATTTGGAGCAGCAGAAGTATGATGA...GACCTGTTCAGCCTTTCTGCACTTCCCATGGACCAGTGGAGTGAGAACCTCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 ENSMUST00000192847.6 |
||
| CDS-3UTR GCA 90 bp | ACTGAGGTTCTCACTCCACTGGTCCATGGGAAGTGCAGAAAGGCTGAACAGGTCTCATCATCATACTTCTaGTGCTCCAAATTCTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: TEVLTPLVHGKCRKAEQVSSSYF*CSKFSN Trigger: GTTGGAGAATTTGGAGCAGCAGAAGTATGATGATGA...GACCTGTTCAGCCTTTCTGCACTTCCCATGGACCAGTGGAGTGAGAACCTCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 ENSMUST00000192847.6 |
||
| CDS-3UTR CCA 90 bp | ACTGAGGTTCTCACTCCACTGGTCCATGGGAAGTGCAGAAAGGCTGAACAGGTCAAGATTCTAAGGTCCTaGACACTCTCACCAAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TEVLTPLVHGKCRKAEQVKILRS*TLSPSF Trigger: AAAACTTGGTGAGAGTGTCCAGGACCTTAGAATCTT...GACCTGTTCAGCCTTTCTGCACTTCCCATGGACCAGTGGAGTGAGAACCTCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192847.6 |
||
| CDS-3UTR TCA 90 bp | ACTGAGGTTCTCACTCCACTGGTCCATGGGAAGTGCAGAAAGGCTGAACAGGTCTCTTTGACAGATTCTTaGAGGATGTCTGATAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: TEVLTPLVHGKCRKAEQVSLTDS*RMSDRT Trigger: TGTTCTATCAGACATCCTTCAAGAATCTGTCAAAGA...GACCTGTTCAGCCTTTCTGCACTTCCCATGGACCAGTGGAGTGAGAACCTCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 ENSMUST00000192847.6 |
||
| CDS-3UTR TCA 90 bp | ACTGAGGTTCTCACTCCACTGGTCCATGGGAAGTGCAGAAAGGCTGAACAGGTCGGAATGCTGCAAGAATaGTTCTTGTTACTTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TEVLTPLVHGKCRKAEQVGMLQE*FLLLSL Trigger: AAGAGAAAGTAACAAGAATCATTCTTGCAGCATTCC...GACCTGTTCAGCCTTTCTGCACTTCCCATGGACCAGTGGAGTGAGAACCTCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 ENSMUST00000192847.6 |
||
| CDS-3UTR TCA 90 bp | ACTGAGGTTCTCACTCCACTGGTCCATGGGAAGTGCAGAAAGGCTGAACAGGTCCTCTGTGAACTCAGCTaGGTTTTTATCCAATTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TEVLTPLVHGKCRKAEQVLCELS*VFIQLK Trigger: TTTCAATTGGATAAAAACTCAGCTGAGTTCACAGAG...GACCTGTTCAGCCTTTCTGCACTTCCCATGGACCAGTGGAGTGAGAACCTCAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192698.3 |
||
| CDS-3UTR TCA 90 bp | ACTGAGGTTCTCACTCCACTGGTCCATGGGAAGTGCAGAAAGGCTGAACAGGTCATACTGAGAACTCTGTaGACTCAGCTGAGTTTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: TEVLTPLVHGKCRKAEQVILRTL*TQLSFY Trigger: ATAAAAACTCAGCTGAGTTCACAGAGTTCTCAGTAT...GACCTGTTCAGCCTTTCTGCACTTCCCATGGACCAGTGGAGTGAGAACCTCAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192698.3 |
||
| CDS-3UTR GCA 90 bp | ACTGAGGTTCTCACTCCACTGGTCCATGGGAAGTGCAGAAAGGCTGAACAGGTCCTTGGCGATAATTCTTaGTGCCATATGAACAGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: TEVLTPLVHGKCRKAEQVLGDNS*CHMNSK Trigger: TTTACTGTTCATATGGCAGCAAGAATTATCGCCAAG...GACCTGTTCAGCCTTTCTGCACTTCCCATGGACCAGTGGAGTGAGAACCTCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 ENSMUST00000192847.6 |
||
| CDS-3UTR GCA 90 bp | ACTGAGGTTCTCACTCCACTGGTCCATGGGAAGTGCAGAAAGGCTGAACAGGTCAGTAATTTAAGTCACTaGCTTCCATCAGTTCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TEVLTPLVHGKCRKAEQVSNLSH*LPSVLS Trigger: GGAAAGAACTGATGGAAGGCAGTGACTTAAATTACT...GACCTGTTCAGCCTTTCTGCACTTCCCATGGACCAGTGGAGTGAGAACCTCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 ENSMUST00000192847.6 |
||
| CDS-3UTR CAA 90 bp | ACTGAGGTTCTCACTCCACTGGTCCATGGGAAGTGCAGAAAGGCTGAACAGGTCGCAAACCGGTACTCATaGACCCGGAGCATCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TEVLTPLVHGKCRKAEQVANRYS*TRSISC Trigger: GCAGCTGATGCTCCGGGTCAATGAGTACCGGTTTGC...GACCTGTTCAGCCTTTCTGCACTTCCCATGGACCAGTGGAGTGAGAACCTCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 ENSMUST00000192847.6 |
||
| CDS-3UTR CAA 90 bp | ACTGAGGTTCTCACTCCACTGGTCCATGGGAAGTGCAGAAAGGCTGAACAGGTCCCTGGCGATTCAACATaGGCAGGAAGTATGGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TEVLTPLVHGKCRKAEQVPGDST*AGSMAR Trigger: CCTGGCCATACTTCCTGCCAATGTTGAATCGCCAGG...GACCTGTTCAGCCTTTCTGCACTTCCCATGGACCAGTGGAGTGAGAACCTCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 ENSMUST00000192847.6 |
||
| CDS TCA 90 bp | TACAGTTCACTCCATCTGCTTCTACCCAGGCAAACCGGTACTCATTaGCCCGGAGCATCAGCTGCAGACAGCCAGCAACACACTGCACAT | + |
|
Preference number: 5 (lower is better) Translates to: YSSLHLLLPRQTGTH*PGASAADSQQHTAH Trigger: ATGTGCAGTGTGTTGCTGGCTGTCTGCAGCTGATGCTCCGGGTCAATGAGTACCGGTTTGCCTGGGTAGAAGCAGATGGAGTGAACTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 ENSMUST00000192847.6 |
||
| CDS-3UTR CAA 90 bp | ACTGAGGTTCTCACTCCACTGGTCCATGGGAAGTGCAGAAAGGCTGAACAGGTCTGCCAGTTCACTTTGTaGGCACGAACTTCAGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: TEVLTPLVHGKCRKAEQVCQFTL*ARTSAA Trigger: GGCTGCTGAAGTTCGTGCCAACAAAGTGAACTGGCA...GACCTGTTCAGCCTTTCTGCACTTCCCATGGACCAGTGGAGTGAGAACCTCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 ENSMUST00000192847.6 |
||
| CDS-3UTR CAA 90 bp | ACTGAGGTTCTCACTCCACTGGTCCATGGGAAGTGCAGAAAGGCTGAACAGGTCCCCCAAGCAGCTAACTaGGCGATAATTCTTGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: TEVLTPLVHGKCRKAEQVPQAAN*AIILAA Trigger: GGCAGCAAGAATTATCGCCAAGTTAGCTGCTTGGGG...GACCTGTTCAGCCTTTCTGCACTTCCCATGGACCAGTGGAGTGAGAACCTCAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 ENSMUST00000192847.6 |
||
| CDS-3UTR CAA 90 bp | ACTGAGGTTCTCACTCCACTGGTCCATGGGAAGTGCAGAAAGGCTGAACAGGTCGACTGCCAGTTCACTTaGTTGGCACGAACTTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: TEVLTPLVHGKCRKAEQVDCQFT*LARTSA Trigger: TGCTGAAGTTCGTGCCAACAAAGTGAACTGGCAGTC...GACCTGTTCAGCCTTTCTGCACTTCCCATGGACCAGTGGAGTGAGAACCTCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 ENSMUST00000192847.6 |
||
| CDS-3UTR CAA 90 bp | ACTGAGGTTCTCACTCCACTGGTCCATGGGAAGTGCAGAAAGGCTGAACAGGTCAAGGTGCTCACACATTaGAGGACTGAATGCCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: TEVLTPLVHGKCRKAEQVKVLTH*RTECQE Trigger: CTCCTGGCATTCAGTCCTCAAATGTGTGAGCACCTT...GACCTGTTCAGCCTTTCTGCACTTCCCATGGACCAGTGGAGTGAGAACCTCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 ENSMUST00000192847.6 |
||
| CDS-3UTR CAA 90 bp | ACTGAGGTTCTCACTCCACTGGTCCATGGGAAGTGCAGAAAGGCTGAACAGGTCAGCCAGAGCATACTCTaGGCGAGTTTCTCTTTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: TEVLTPLVHGKCRKAEQVSQSIL*ASFSFR Trigger: ACGGAAAGAGAAACTCGCCAAGAGTATGCTCTGGCT...GACCTGTTCAGCCTTTCTGCACTTCCCATGGACCAGTGGAGTGAGAACCTCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 ENSMUST00000192847.6 |
||
| CDS-3UTR CAA 90 bp | ACTGAGGTTCTCACTCCACTGGTCCATGGGAAGTGCAGAAAGGCTGAACAGGTCCCAAGATATTCCCAGTaGTGCACCATGAGCTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TEVLTPLVHGKCRKAEQVPRYSQ*CTMSFC Trigger: GCAGAAGCTCATGGTGCACAACTGGGAATATCTTGG...GACCTGTTCAGCCTTTCTGCACTTCCCATGGACCAGTGGAGTGAGAACCTCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 ENSMUST00000192847.6 |
||
| CDS CCA 90 bp | TTTGTTGGCACGAACTTCAGCAGCCTTGGCCGCAATGATGTTAGTTaGGACAGCAGCATCCACAGCACCTCGAATGTCCATCTTGGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: FVGTNFSSLGRNDVS*DSSIHSTSNVHLGH Trigger: ATGACCAAGATGGACATTCGAGGTGCTGTGGATGCTGCTGTCCCAACTAACATCATTGCGGCCAAGGCTGCTGAAGTTCGTGCCAACAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 ENSMUST00000192847.6 ENSMUST00000194676.6 |
||
| CDS-3UTR CAA 90 bp | ACTGAGGTTCTCACTCCACTGGTCCATGGGAAGTGCAGAAAGGCTGAACAGGTCTGCACTGTCTGTTCTTaGGAGATGTGCGTCATCAGA | + |
|
Preference number: 5 (lower is better) Translates to: TEVLTPLVHGKCRKAEQVCTVCS*EMCVIR Trigger: TCTGATGACGCACATCTCCAAAGAACAGACAGTGCA...GACCTGTTCAGCCTTTCTGCACTTCCCATGGACCAGTGGAGTGAGAACCTCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 ENSMUST00000192847.6 |
||
| CDS TCA 90 bp | GCTCTGACTGTAGTTGTTTACCAAGATATTCCCAGTTGTGCACCATaGGCTTCTGCACGGCCAGAAGAGCATTGTAGCGAACCTGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: ALTVVVYQDIPSCAP*ASARPEEHCSEPAG Trigger: ACCAGCAGGTTCGCTACAATGCTCTTCTGGCCGTGCAGAAGCTCATGGTGCACAACTGGGAATATCTTGGTAAACAACTACAGTCAGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 ENSMUST00000192847.6 |
||
| CDS-3UTR CAA 90 bp | ACTGAGGTTCTCACTCCACTGGTCCATGGGAAGTGCAGAAAGGCTGAACAGGTCAGTTTGAAGCATCTCTaGCTTGTCCTCGGAACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: TEVLTPLVHGKCRKAEQVSLKHL*LVLGTS Trigger: AGAAGTTCCGAGGACAAGCAAGAGATGCTTCAAACT...GACCTGTTCAGCCTTTCTGCACTTCCCATGGACCAGTGGAGTGAGAACCTCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 ENSMUST00000192847.6 |
||
| CDS-3UTR CAA 90 bp | ACTGAGGTTCTCACTCCACTGGTCCATGGGAAGTGCAGAAAGGCTGAACAGGTCCAAAATTTCTCAGACTaGTGTACAGGGCTCCATTCC | + |
|
Preference number: 5 (lower is better) Translates to: TEVLTPLVHGKCRKAEQVQNFSD*CTGLHS Trigger: GGAATGGAGCCCTGTACACAAGTCTGAGAAATTTTG...GACCTGTTCAGCCTTTCTGCACTTCCCATGGACCAGTGGAGTGAGAACCTCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 |
||
| CDS CCA 90 bp | TCTTGCTGCCATATGAACAGTAAAGGGATCCTGGCGATTCAACATTaGCAGGAAGTATGGCCAGGCAGTGCTCTTGCTTCGTTTCGCATA | + |
|
Preference number: 5 (lower is better) Translates to: SCCHMNSKGILAIQH*QEVWPGSALASFRI Trigger: TATGCGAAACGAAGCAAGAGCACTGCCTGGCCATACTTCCTGCCAATGTTGAATCGCCAGGATCCCTTTACTGTTCATATGGCAGCAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 ENSMUST00000192847.6 |
||
| CDS TCA 90 bp | GCCAGGCAGTGCTCTTGCTTCGTTTCGCATAGTCAAAGAAAATGCTaGCACGCTGGTGATTTTCCTGCAGCATATCGTCAACCATGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: ARQCSCFVSHSQRKC*HAGDFPAAYRQPWL Trigger: TAACCATGGTTGACGATATGCTGCAGGAAAATCACCAGCGTGTCAGCATTTTCTTTGACTATGCGAAACGAAGCAAGAGCACTGCCTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 ENSMUST00000192847.6 ENSMUST00000194676.6 |
||
| CDS-3UTR CAA 90 bp | ACTGAGGTTCTCACTCCACTGGTCCATGGGAAGTGCAGAAAGGCTGAACAGGTCACTGAGAACTATCACTaGAAGAGATTGTTCCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: TEVLTPLVHGKCRKAEQVTENYH*KRLFLF Trigger: AAACAGGAACAATCTCTTCAAGTGATAGTTCTCAGT...GACCTGTTCAGCCTTTCTGCACTTCCCATGGACCAGTGGAGTGAGAACCTCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044369.13 ENSMUST00000192847.6 |
||
| CDS-3UTR CAA 90 bp | ACTGAGGTTCTCACTCCACTGGTCCATGGGAAGTGCAGAAAGGCTGAACAGGTCTTTCAGTACTTTGCATaGAATCATAGCCAGAGCATA | + |
|
Preference number: 5 (lower is better) Translates to: TEVLTPLVHGKCRKAEQVFQYFA*NHSQSI Trigger: TATGCTCTGGCTATGATTCAATGCAAAGTACTGAAA...GACCTGTTCAGCCTTTCTGCACTTCCCATGGACCAGTGGAGTGAGAACCTCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 ENSMUST00000192847.6 |
||
| CDS CCA 90 bp | ATGAACAGTAAAGGGATCCTGGCGATTCAACATTGGCAGGAAGTATaGCCAGGCAGTGCTCTTGCTTCGTTTCGCATAGTCAAAGAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: MNSKGILAIQHWQEV*PGSALASFRIVKEN Trigger: ATTTTCTTTGACTATGCGAAACGAAGCAAGAGCACTGCCTGGCCATACTTCCTGCCAATGTTGAATCGCCAGGATCCCTTTACTGTTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 ENSMUST00000192847.6 ENSMUST00000194676.6 |
||
| CDS TCA 90 bp | TACTTCTGCTGCTCCAAATTCTCCAACTGTTTCAGTACTTTGCATTaGATCATAGCCAGAGCATACTCTTGGCGAGTTTCTCTTTCCGTT | + |
|
Preference number: 5 (lower is better) Translates to: YFCCSKFSNCFSTLH*IIARAYSWRVSLSV Trigger: AACGGAAAGAGAAACTCGCCAAGAGTATGCTCTGGCTATGATTCAATGCAAAGTACTGAAACAGTTGGAGAATTTGGAGCAGCAGAAGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 ENSMUST00000192847.6 |
||
| CDS GCA 90 bp | TCAACCATGGTTAGTATGTACTGCACTGTCTGTTCTTTGGAGATGTaGGTCATCAGATTTATAAATGTTTTAGCACACTGGCTGCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: STMVSMYCTVCSLEM*VIRFINVLAHWLPS Trigger: TGAAGGCAGCCAGTGTGCTAAAACATTTATAAATCTGATGACGCACATCTCCAAAGAACAGACAGTGCAGTACATACTAACCATGGTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000044369.13 ENSMUST00000192029.6 ENSMUST00000192698.3 ENSMUST00000192847.6 ENSMUST00000194676.6 |
||
| CDS TCA 72 bp | CTCCATCTGCTTCTACCCAGGCAAACCGGTACTCATTaGCCCGGAGCATCAGCTGCAGACAGCCAGCAACAC | + |
|
Preference number: 6 (lower is better) Translates to: LHLLLPRQTGTH*PGASAADSQQH Trigger: GTGTTGCTGGCTGTCTGCAGCTGATGCTCCGGGTCAATGAGTACCGGTTTGCCTGGGTAGAAGCAGATGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 ENSMUST00000192847.6 |
||
| CDS CAA 72 bp | ACTCCATCTGCTTCTACCCAGGCAAACCGGTACTCATaGACCCGGAGCATCAGCTGCAGACAGCCAGCAACA | + |
|
Preference number: 6 (lower is better) Translates to: TPSASTQANRYS*TRSISCRQPAT Trigger: TGTTGCTGGCTGTCTGCAGCTGATGCTCCGGGTCAATGAGTACCGGTTTGCCTGGGTAGAAGCAGATGGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 ENSMUST00000192847.6 |
||
| CDS CAA 90 bp | ATACAGTTCACTCCATCTGCTTCTACCCAGGCAAACCGGTACTCATaGACCCGGAGCATCAGCTGCAGACAGCCAGCAACACACTGCACA | + |
|
Preference number: 6 (lower is better) Translates to: IQFTPSASTQANRYS*TRSISCRQPATHCT Trigger: TGTGCAGTGTGTTGCTGGCTGTCTGCAGCTGATGCTCCGGGTCAATGAGTACCGGTTTGCCTGGGTAGAAGCAGATGGAGTGAACTGTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 ENSMUST00000192847.6 |
||
| CDS CAA 72 bp | TGCCAGTTCACTTTGTTGGCACGAACTTCAGCAGCCTaGGCCGCAATGATGTTAGTTGGGACAGCAGCATCC | + |
|
Preference number: 6 (lower is better) Translates to: CQFTLLARTSAA*AAMMLVGTAAS Trigger: GGATGCTGCTGTCCCAACTAACATCATTGCGGCCAAGGCTGCTGAAGTTCGTGCCAACAAAGTGAACTGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 ENSMUST00000192847.6 ENSMUST00000194676.6 |
||
| CDS CCA 72 bp | CATATGAACAGTAAAGGGATCCTGGCGATTCAACATTaGCAGGAAGTATGGCCAGGCAGTGCTCTTGCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: HMNSKGILAIQH*QEVWPGSALAS Trigger: CGAAGCAAGAGCACTGCCTGGCCATACTTCCTGCCAATGTTGAATCGCCAGGATCCCTTTACTGTTCATATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 ENSMUST00000192847.6 ENSMUST00000194676.6 |
||
| CDS GCA 72 bp | GGCGATTCAACATTGGCAGGAAGTATGGCCAGGCAGTaGTCTTGCTTCGTTTCGCATAGTCAAAGAAAATGC | + |
|
Preference number: 6 (lower is better) Translates to: GDSTLAGSMARQ*SCFVSHSQRKC Trigger: GCATTTTCTTTGACTATGCGAAACGAAGCAAGAGCACTGCCTGGCCATACTTCCTGCCAATGTTGAATCGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 ENSMUST00000192847.6 ENSMUST00000194676.6 |
||
| CDS GCA 72 bp | GTTACTCAAAACGCCCATTATACAGTTCACTCCATCTaGTTCTACCCAGGCAAACCGGTACTCATTGACCCG | + |
|
Preference number: 6 (lower is better) Translates to: VTQNAHYTVHSI*FYPGKPVLIDP Trigger: CGGGTCAATGAGTACCGGTTTGCCTGGGTAGAAGCAGATGGAGTGAACTGTATAATGGGCGTTTTGAGTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 ENSMUST00000192847.6 |
||
| CDS CAA 72 bp | TGCTCTGACTGTAGTTGTTTACCAAGATATTCCCAGTaGTGCACCATGAGCTTCTGCACGGCCAGAAGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: CSDCSCLPRYSQ*CTMSFCTARRA Trigger: TGCTCTTCTGGCCGTGCAGAAGCTCATGGTGCACAACTGGGAATATCTTGGTAAACAACTACAGTCAGAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 ENSMUST00000192847.6 |
||
| CDS CAA 90 bp | AGCCAGCAACACACTGCACATACTGAGAACTATCACTTGAAGAGATaGTTCCTGTTTCAACAGCAACACCGCTGCCACGAAGTTTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: SQQHTAHTENYHLKR*FLFQQQHRCHEVSV Trigger: CACAGAAACTTCGTGGCAGCGGTGTTGCTGTTGAAACAGGAACAATCTCTTCAAGTGATAGTTCTCAGTATGTGCAGTGTGTTGCTGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044369.13 ENSMUST00000192847.6 |
||
| CDS TCA 72 bp | GTAGTTGTTTACCAAGATATTCCCAGTTGTGCACCATaGGCTTCTGCACGGCCAGAAGAGCATTGTAGCGAA | + |
|
Preference number: 6 (lower is better) Translates to: VVVYQDIPSCAP*ASARPEEHCSE Trigger: TTCGCTACAATGCTCTTCTGGCCGTGCAGAAGCTCATGGTGCACAACTGGGAATATCTTGGTAAACAACTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 ENSMUST00000192847.6 |
||
| CDS TCA 72 bp | GCCAGCAACACACTGCACATACTGAGAACTATCACTTaGAGAGATTGTTCCTGTTTCAACAGCAACACCGCT | + |
|
Preference number: 6 (lower is better) Translates to: ASNTLHILRTIT*RDCSCFNSNTA Trigger: AGCGGTGTTGCTGTTGAAACAGGAACAATCTCTTCAAGTGATAGTTCTCAGTATGTGCAGTGTGTTGCTGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044369.13 ENSMUST00000192847.6 |
||
| CDS GCA 72 bp | TCCTGCAGCATATCGTCAACCATGGTTAGTATGTACTaGACTGTCTGTTCTTTGGAGATGTGCGTCATCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SCSISSTMVSMY*TVCSLEMCVIR Trigger: TCTGATGACGCACATCTCCAAAGAACAGACAGTGCAGTACATACTAACCATGGTTGACGATATGCTGCAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000044369.13 ENSMUST00000192029.6 ENSMUST00000192698.3 ENSMUST00000192847.6 ENSMUST00000194676.6 |
||
| CDS CAA 72 bp | CACACTGCACATACTGAGAACTATCACTTGAAGAGATaGTTCCTGTTTCAACAGCAACACCGCTGCCACGAA | + |
|
Preference number: 6 (lower is better) Translates to: HTAHTENYHLKR*FLFQQQHRCHE Trigger: TTCGTGGCAGCGGTGTTGCTGTTGAAACAGGAACAATCTCTTCAAGTGATAGTTCTCAGTATGTGCAGTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044369.13 ENSMUST00000192847.6 |
||
| CDS TCA 72 bp | TGCTCTTGCTTCGTTTCGCATAGTCAAAGAAAATGCTaGCACGCTGGTGATTTTCCTGCAGCATATCGTCAA | + |
|
Preference number: 6 (lower is better) Translates to: CSCFVSHSQRKC*HAGDFPAAYRQ Trigger: TTGACGATATGCTGCAGGAAAATCACCAGCGTGTCAGCATTTTCTTTGACTATGCGAAACGAAGCAAGAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 ENSMUST00000192847.6 ENSMUST00000194676.6 |
||
| CDS CAA 72 bp | CTGCTCCAAATTCTCCAACTGTTTCAGTACTTTGCATaGAATCATAGCCAGAGCATACTCTTGGCGAGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: LLQILQLFQYFA*NHSQSILLASF Trigger: GAAACTCGCCAAGAGTATGCTCTGGCTATGATTCAATGCAAAGTACTGAAACAGTTGGAGAATTTGGAGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 ENSMUST00000192847.6 |
||
| CDS CAA 90 bp | ATACTTCTGCTGCTCCAAATTCTCCAACTGTTTCAGTACTTTGCATaGAATCATAGCCAGAGCATACTCTTGGCGAGTTTCTCTTTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: ILLLLQILQLFQYFA*NHSQSILLASFSFR Trigger: ACGGAAAGAGAAACTCGCCAAGAGTATGCTCTGGCTATGATTCAATGCAAAGTACTGAAACAGTTGGAGAATTTGGAGCAGCAGAAGTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 ENSMUST00000192847.6 |
||
| CDS TCA 72 bp | TGCTCCAAATTCTCCAACTGTTTCAGTACTTTGCATTaGATCATAGCCAGAGCATACTCTTGGCGAGTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: CSKFSNCFSTLH*IIARAYSWRVS Trigger: AGAAACTCGCCAAGAGTATGCTCTGGCTATGATTCAATGCAAAGTACTGAAACAGTTGGAGAATTTGGAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 ENSMUST00000192847.6 |
||
| CDS CAA 72 bp | AACCTCACGGCATTTTCTCTCCAAAATTTCTCAGACTaGTGTACAGGGCTCCATTCCAATCTTCCAGATTTA | + |
|
Preference number: 6 (lower is better) Translates to: NLTAFSLQNFSD*CTGLHSNLPDL Trigger: TAAATCTGGAAGATTGGAATGGAGCCCTGTACACAAGTCTGAGAAATTTTGGAGAGAAAATGCCGTGAGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 |
||
| CDS CAA 90 bp | AGCATATCGTCAACCATGGTTAGTATGTACTGCACTGTCTGTTCTTaGGAGATGTGCGTCATCAGATTTATAAATGTTTTAGCACACTGG | + |
|
Preference number: 6 (lower is better) Translates to: SISSTMVSMYCTVCS*EMCVIRFINVLAHW Trigger: CCAGTGTGCTAAAACATTTATAAATCTGATGACGCACATCTCCAAAGAACAGACAGTGCAGTACATACTAACCATGGTTGACGATATGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000044369.13 ENSMUST00000192029.6 ENSMUST00000192698.3 ENSMUST00000192847.6 ENSMUST00000194676.6 |
||
| CDS CAA 90 bp | TTCTCATTCAACCTCACGGCATTTTCTCTCCAAAATTTCTCAGACTaGTGTACAGGGCTCCATTCCAATCTTCCAGATTTAAGTTCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: FSFNLTAFSLQNFSD*CTGLHSNLPDLSSE Trigger: TTCAGAACTTAAATCTGGAAGATTGGAATGGAGCCCTGTACACAAGTCTGAGAAATTTTGGAGAGAAAATGCCGTGAGGTTGAATGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044369.13 ENSMUST00000192698.3 |
||
| CDS CAA 72 bp | TCAACCATGGTTAGTATGTACTGCACTGTCTGTTCTTaGGAGATGTGCGTCATCAGATTTATAAATGTTTTA | + |
|
Preference number: 6 (lower is better) Translates to: STMVSMYCTVCS*EMCVIRFINVL Trigger: TAAAACATTTATAAATCTGATGACGCACATCTCCAAAGAACAGACAGTGCAGTACATACTAACCATGGTTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000044369.13 ENSMUST00000192029.6 ENSMUST00000192698.3 ENSMUST00000192847.6 ENSMUST00000194676.6 |
||